View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8706_low_2 (Length: 350)
Name: NF8706_low_2
Description: NF8706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8706_low_2 |
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Alignment Details
Target: chr5 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 13 - 327
Target Start/End: Complemental strand, 735930 - 735616
Alignment:
| Q |
13 |
tggacatcaggacttggactgtgaaactggtgtaagattttctttatcaccagagggagattctctcttctttgaaaaatggttttcgcagggatcaagg |
112 |
Q |
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| T |
735930 |
tggacataaggacttggactgtgaaactggtgtaagattttctttatcaccaaagggagattctctcttctttgaaaaatggttttcgcagggatcaagg |
735831 |
T |
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| Q |
113 |
atttcacatttgagtttgttgtgttggaattgttgacaggtttcacctgcatgccaaggaactttgcatcgcgagcagaataacctatgacaaatggggc |
212 |
Q |
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| T |
735830 |
atttcacatttgagtttgttgtgttggaattgttgacaggtttcacctgcatgccaaggaacgttgcatcgcgagcagaataacctatgacaaatggggc |
735731 |
T |
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| Q |
213 |
aatctgcatcaataacagtttgaaacccatcattcaagagataacctgagcaattcttgaacggacaaatcacccacatatcgttatcatcagcttcatc |
312 |
Q |
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| T |
735730 |
aatctgcatcaataacagtttgaaacccatcattcaagagataacctgagcaattcttgaacggacaaatcacccacatatcgttatcatcagcttcatc |
735631 |
T |
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| Q |
313 |
gtagaaaactattct |
327 |
Q |
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| T |
735630 |
gtagaaaactattct |
735616 |
T |
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