View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8707_high_8 (Length: 253)
Name: NF8707_high_8
Description: NF8707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8707_high_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 15 - 253
Target Start/End: Original strand, 44344963 - 44345214
Alignment:
| Q |
15 |
atgaagaggcattcaactcgtcaaaaactatgaatcttaaattcaaatatgaaataattttaaacgtaaaatcaattttgaca-------------taga |
101 |
Q |
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| T |
44344963 |
atgaagaggaattcaactcgtcaaaaactatgaatcttaaattcaaatatgaaataattttaaacgtaaaatcaattttgacacctaaaaaaaaaataga |
44345062 |
T |
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| Q |
102 |
accaaacaaaaacatgacacactactccaactcca------ctggaccatagtaactataactatatatagtattcctaactcttcccttctcttattaa |
195 |
Q |
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| T |
44345063 |
accaaacaaaaacatgacacactactccaactccaactccactggaccatagtaac------tatatatagtattcctaactcttcccttctcttattaa |
44345156 |
T |
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| Q |
196 |
tactattagcaccaaactatatttcccttaatcttctttgttgtcattctacatatta |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44345157 |
tactattagcaccaaactatatttcccttaatcttctttgttgtcattctacatatta |
44345214 |
T |
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