View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8707_low_7 (Length: 296)

Name: NF8707_low_7
Description: NF8707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8707_low_7
NF8707_low_7
[»] chr2 (20 HSPs)
chr2 (18-296)||(40640704-40640982)
chr2 (20-104)||(38824062-38824146)
chr2 (25-104)||(35316867-35316945)
chr2 (20-98)||(13238718-13238795)
chr2 (36-103)||(23259443-23259510)
chr2 (25-103)||(2063396-2063472)
chr2 (38-104)||(45625034-45625100)
chr2 (27-104)||(11864913-11864989)
chr2 (20-104)||(28564929-28565012)
chr2 (233-296)||(40628230-40628293)
chr2 (192-296)||(40617658-40617762)
chr2 (36-103)||(36758818-36758884)
chr2 (36-82)||(21454473-21454518)
chr2 (39-104)||(4446851-4446916)
chr2 (31-64)||(13780546-13780579)
chr2 (36-64)||(375045-375073)
chr2 (36-64)||(8988907-8988935)
chr2 (36-64)||(23459841-23459869)
chr2 (36-64)||(29188706-29188734)
chr2 (39-79)||(36929771-36929810)
[»] chr7 (27 HSPs)
chr7 (20-103)||(33450543-33450626)
chr7 (19-104)||(34985900-34985985)
chr7 (20-103)||(47500238-47500321)
chr7 (25-103)||(44648006-44648083)
chr7 (20-89)||(7362605-7362673)
chr7 (38-103)||(21151206-21151271)
chr7 (36-103)||(4888519-4888586)
chr7 (20-103)||(9559010-9559092)
chr7 (26-89)||(33608847-33608909)
chr7 (41-103)||(16366575-16366637)
chr7 (25-103)||(18198298-18198375)
chr7 (36-98)||(45260388-45260450)
chr7 (36-98)||(47226037-47226099)
chr7 (20-79)||(12139364-12139422)
chr7 (36-98)||(47271109-47271170)
chr7 (36-95)||(989181-989239)
chr7 (36-103)||(29631100-29631164)
chr7 (20-103)||(39855770-39855851)
chr7 (31-64)||(14696752-14696785)
chr7 (20-61)||(19027681-19027722)
chr7 (20-61)||(20726914-20726955)
chr7 (31-64)||(32520324-32520357)
chr7 (20-68)||(25084719-25084766)
chr7 (36-96)||(32916008-32916067)
chr7 (36-64)||(35737165-35737193)
chr7 (36-64)||(47080481-47080509)
chr7 (36-64)||(47799895-47799923)
[»] chr1 (16 HSPs)
chr1 (25-104)||(18976259-18976338)
chr1 (28-104)||(1228495-1228571)
chr1 (25-103)||(50484428-50484505)
chr1 (36-103)||(12380833-12380900)
chr1 (36-103)||(12384900-12384967)
chr1 (20-103)||(45978042-45978124)
chr1 (20-103)||(50294019-50294101)
chr1 (25-79)||(23861932-23861985)
chr1 (25-103)||(48327110-48327187)
chr1 (36-104)||(12151819-12151887)
chr1 (20-98)||(40328315-40328389)
chr1 (38-103)||(7840635-7840700)
chr1 (29-79)||(30860749-30860799)
chr1 (25-95)||(32361271-32361340)
chr1 (31-64)||(18107316-18107349)
chr1 (36-64)||(30077639-30077667)
[»] chr3 (20 HSPs)
chr3 (20-104)||(48084856-48084940)
chr3 (20-103)||(27033688-27033770)
chr3 (25-105)||(24754699-24754778)
chr3 (25-105)||(24763696-24763775)
chr3 (20-103)||(19830387-19830469)
chr3 (36-103)||(43719903-43719970)
chr3 (25-98)||(40851816-40851888)
chr3 (27-95)||(2230027-2230094)
chr3 (26-101)||(566732-566806)
chr3 (20-103)||(34373868-34373950)
chr3 (36-79)||(46167445-46167488)
chr3 (50-103)||(40809529-40809581)
chr3 (51-103)||(24647905-24647957)
chr3 (20-61)||(40810353-40810394)
chr3 (36-104)||(3009273-3009340)
chr3 (43-79)||(12403025-12403061)
chr3 (36-104)||(28229358-28229425)
chr3 (36-64)||(31523663-31523691)
chr3 (39-103)||(33632877-33632940)
chr3 (36-64)||(49679265-49679293)
[»] chr6 (22 HSPs)
chr6 (20-98)||(227524-227602)
chr6 (25-103)||(13888478-13888556)
chr6 (20-103)||(4804485-4804567)
chr6 (20-103)||(7162121-7162203)
chr6 (20-103)||(21159325-21159407)
chr6 (36-104)||(13089704-13089772)
chr6 (25-104)||(1516162-1516239)
chr6 (25-104)||(1518251-1518328)
chr6 (20-103)||(12412674-12412756)
chr6 (20-103)||(17944199-17944281)
chr6 (25-103)||(32737899-32737976)
chr6 (36-104)||(30460876-30460943)
chr6 (36-98)||(1249109-1249171)
chr6 (25-103)||(1515498-1515574)
chr6 (20-98)||(27826575-27826652)
chr6 (39-95)||(29229149-29229204)
chr6 (36-89)||(28696626-28696678)
chr6 (36-64)||(2142288-2142316)
chr6 (39-103)||(2800567-2800631)
chr6 (39-95)||(7215816-7215872)
chr6 (39-103)||(17828525-17828588)
chr6 (36-64)||(24484931-24484959)
[»] chr4 (28 HSPs)
chr4 (20-101)||(47922324-47922405)
chr4 (18-103)||(23610677-23610761)
chr4 (25-109)||(12312425-12312509)
chr4 (20-103)||(19901874-19901956)
chr4 (20-103)||(34927522-34927604)
chr4 (20-103)||(56558316-56558398)
chr4 (36-104)||(12153206-12153274)
chr4 (25-105)||(33247084-33247163)
chr4 (36-103)||(5416422-5416489)
chr4 (25-98)||(34778463-34778535)
chr4 (20-103)||(3952126-3952208)
chr4 (25-76)||(26429010-26429061)
chr4 (25-104)||(39862559-39862637)
chr4 (20-89)||(30567938-30568006)
chr4 (20-103)||(18206996-18207078)
chr4 (36-103)||(52018815-52018882)
chr4 (20-103)||(5763118-5763200)
chr4 (20-103)||(24073653-24073735)
chr4 (25-104)||(33262507-33262585)
chr4 (36-103)||(33524314-33524381)
chr4 (20-103)||(38079676-38079758)
chr4 (36-96)||(33841768-33841827)
chr4 (39-101)||(36532680-36532741)
chr4 (31-64)||(17493050-17493083)
chr4 (36-96)||(1871329-1871388)
chr4 (36-64)||(5361478-5361506)
chr4 (36-64)||(36688183-36688211)
chr4 (36-64)||(56269071-56269099)
[»] chr8 (16 HSPs)
chr8 (20-103)||(45113307-45113390)
chr8 (27-100)||(6014238-6014311)
chr8 (42-103)||(5033310-5033371)
chr8 (18-103)||(10652573-10652657)
chr8 (20-103)||(28069756-28069838)
chr8 (20-103)||(30426625-30426707)
chr8 (41-104)||(36991413-36991476)
chr8 (25-103)||(10672470-10672545)
chr8 (36-103)||(37966400-37966466)
chr8 (42-98)||(44859130-44859186)
chr8 (20-79)||(40695228-40695285)
chr8 (36-86)||(28318869-28318919)
chr8 (31-64)||(17867654-17867687)
chr8 (36-64)||(1937149-1937177)
chr8 (36-64)||(26749543-26749571)
chr8 (43-79)||(41511321-41511357)
[»] chr5 (20 HSPs)
chr5 (25-98)||(11775835-11775907)
chr5 (18-103)||(37266766-37266850)
chr5 (20-104)||(35660564-35660647)
chr5 (25-103)||(13032160-13032237)
chr5 (20-79)||(4895715-4895773)
chr5 (20-103)||(14349840-14349922)
chr5 (20-103)||(18625377-18625459)
chr5 (20-103)||(32129573-32129655)
chr5 (36-86)||(43309160-43309210)
chr5 (39-104)||(29341050-29341114)
chr5 (36-104)||(3057468-3057535)
chr5 (20-103)||(39902452-39902534)
chr5 (25-79)||(34827234-34827287)
chr5 (39-96)||(9460599-9460655)
chr5 (36-79)||(18653413-18653455)
chr5 (36-103)||(40753118-40753185)
chr5 (25-79)||(8440951-8441004)
chr5 (39-103)||(31653090-31653153)
chr5 (36-64)||(36290654-36290682)
chr5 (36-64)||(41660158-41660186)
[»] scaffold0012 (1 HSPs)
scaffold0012 (20-103)||(208100-208182)
[»] scaffold0250 (1 HSPs)
scaffold0250 (20-78)||(7184-7241)
[»] scaffold0456 (1 HSPs)
scaffold0456 (20-103)||(13716-13799)
[»] scaffold0035 (1 HSPs)
scaffold0035 (36-79)||(16377-16420)
[»] scaffold0008 (1 HSPs)
scaffold0008 (20-103)||(9157-9239)
[»] scaffold0006 (1 HSPs)
scaffold0006 (36-98)||(73818-73880)
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-99)||(6395-6473)
[»] scaffold0664 (1 HSPs)
scaffold0664 (31-64)||(4695-4728)


Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 40640704 - 40640982
Alignment:
Q  18 atgaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccgggtacaatagagc 117  Q
    |||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||| ||||||| || |||||||||||| |||    
T  40640704 atgacccaccatctattcttttgtatatatctctctccaaattgcaaaactccatttattttaacaaatggagaggatctcaatccgggtacaatacagc 40640803  T
Q  118 ttttcaaagtcgatataaagggtatgcaactgccctatgccaaaatagcattgcaagtcctcaatactataaccattctaatctcaatggctcacgtttc 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40640804 ttttcaaagtcgatataaagggtatgcaattgccctatgccaaaatagcattgcaagtcctcaatactataaccattctaatctcaatggctcacgtttc 40640903  T
Q  218 aaatcttgnnnnnnnagcttccattttccttttcaacatcataaacattccattccttacaattgttatttcctcatgc 296  Q
    ||||||||       ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40640904 aaatcttgtttttttagcttccattttccttttcaacatcataaacattccattccttacaaatgttatttcctcatgc 40640982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 38824062 - 38824146
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||    
T  38824062 gacccaccatttattcttttttgtctatctctctccaaattacaaaactccatttattttagcaaatagagatgatcttaacccg 38824146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 35316867 - 35316945
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| |||||    
T  35316867 accatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccg 35316945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 13238718 - 13238795
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    |||| |||||||||| |||||||||||||||||||||| ||||||| |||||||||||||  |||||||| ||||||||    
T  13238718 gacccaccatctatt-ttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatctt 13238795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 23259510 - 23259443
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||||||||||| ||||||||| |||||||||||  |||||||| |||||||| ||||    
T  23259510 ttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagaggatcttcaccc 23259443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 2063396 - 2063472
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| |||||||||  |||||| | |||||||||||||    
T  2063396 accatctatt-ttttgtgtctatctctctccaaattgc-aaactctatttattttgtcaaatgaagaggatcttaaccc 2063472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 45625100 - 45625034
Alignment:
Q  38 ttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||||||||||||| ||| |||||||||||||||||  |||||||| |||||||| |||||    
T  45625100 ttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcacccg 45625034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 11864913 - 11864989
Alignment:
Q  27 catctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||| |||||||||||||||||||||| ||| |||||||||||||||||   ||||||| |||||||| |||||    
T  11864913 catctatt-ttttgtgtctatctctctccaacttgtaaaactccatttattttgataaatggagaggatcttcacccg 11864989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 28564929 - 28565012
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||| |||||||||| |||||||||||||||||| ||| ||  |||||||||||||||||  |||||||| |||||||| |||||    
T  28564929 gacccaccatctatt-ttttgtgtctatctctctacaacttaaaaaactccatttattttgccaaatggagaggatcttcacccg 28565012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 40628293 - 40628230
Alignment:
Q  233 agcttccattttccttttcaacatcataaacattccattccttacaattgttatttcctcatgc 296  Q
    ||||| ||||||||||||||| || ||||||||||||||||| |||| || |||||||||||||    
T  40628293 agcttgcattttccttttcaatattataaacattccattcctcacaaatgctatttcctcatgc 40628230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 40617762 - 40617658
Alignment:
Q  192 attctaatctcaatggctcacgtttcaaatcttgnnnnnnnagcttccattttccttttcaacatcataaacattccattccttacaattgttatttcct 291  Q
    ||||||||||||||||||||  | ||||||||||       ||||||||||||| |||| ||||||||||||  ||||||||| ||   || ||||||||    
T  40617762 attctaatctcaatggctcagatatcaaatcttgtttttttagcttccattttcttttttaacatcataaacggtccattcctcacggatgctatttcct 40617663  T
Q  292 catgc 296  Q
    |||||    
T  40617662 catgc 40617658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 36758884 - 36758818
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||   ||||||| |||||||| ||||    
T  36758884 ttttgtgtctatctctctccaaattgc-aacttccatttatttttataaatggagaggatctttaccc 36758818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 21454518 - 21454473
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagc 82  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||    
T  21454518 ttttgtgtctatctctctctaaattac-aaactccatttattttagc 21454473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 4446916 - 4446851
Alignment:
Q  39 tgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    ||||||||||||||| ||||||| | |  ||||||||||||| |||||||| |||||  |||||||    
T  4446916 tgtgtctatctctcttcaaattgtacacttccatttattttatcaaatggagaggatactaacccg 4446851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 13780546 - 13780579
Alignment:
Q  31 tattcttttgtgtctatctctctccaaattgcaa 64  Q
    |||| |||||||||||||||||||||||||||||    
T  13780546 tatttttttgtgtctatctctctccaaattgcaa 13780579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 375045 - 375073
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  375045 ttttgtgtctatctctctccaaattgcaa 375073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 8988907 - 8988935
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  8988907 ttttgtgtctatctctctccaaattgcaa 8988935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 23459869 - 23459841
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  23459869 ttttgtgtctatctctctccaaattgcaa 23459841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 29188706 - 29188734
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  29188706 ttttgtgtctatctctctccaaattgcaa 29188734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 36929771 - 36929810
Alignment:
Q  39 tgtgtctatctctctccaaattgcaaaactccatttatttt 79  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  36929771 tgtgtctatctctctccaaattgc-atactccatttatttt 36929810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 9e-33; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 33450543 - 33450626
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  33450543 gacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaaccc 33450626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 34985985 - 34985900
Alignment:
Q  19 tgaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||| ||||||||    
T  34985985 tgacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaattgagaggattttaacccg 34985900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 47500321 - 47500238
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| |||||||||||||    
T  47500321 gacccaccatctattcttttgtgtctatctctctccaaattacaaaactcaatttattttagtaaatggagaggatcttaaccc 47500238  T

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Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 44648006 - 44648083
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  44648006 accatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 44648083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 7362605 - 7362673
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatgga 89  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||  ||||||||    
T  7362605 gacccaccatctatt-ttttgtgtctatctctctccaatttgcaaaactccatttattttgtcaaatgga 7362673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 21151206 - 21151271
Alignment:
Q  38 ttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  21151206 ttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 21151271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 4888519 - 4888586
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||||||||||| ||||||| |||||||||||||  |||||||| |||||||| ||||    
T  4888519 ttttgtgtctatctctctccaacttgcaaatctccatttattttgtcaaatggagaggatcttcaccc 4888586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 9559092 - 9559010
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||| ||||||||||||||| ||||||| |||||||||||||  |||||||| |||||||| ||||    
T  9559092 gacccaccatctatt-ttttgtatctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 9559010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 33608909 - 33608847
Alignment:
Q  26 ccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatgga 89  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  33608909 ccatctatttttttgtgtttatctctctccaaattgc-aaactccatttattttaccaaatgga 33608847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 16366575 - 16366637
Alignment:
Q  41 tgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  16366575 tgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 16366637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 18198298 - 18198375
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||| |||||||||||| | ||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  18198298 accatctatt-ttttgtgtctatttatctccaatttgcaaaactccatttattttgccaaatggagaggatcttcaccc 18198375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 45260450 - 45260388
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    |||||||||||||||||||||| ||||||||||| |||||||||  |||||||| ||||||||    
T  45260450 ttttgtgtctatctctctccaacttgcaaaactcaatttattttgccaaatggagaggatctt 45260388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 47226099 - 47226037
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    |||||||| ||||||||||||| |||||||||||||||||||||  |||||||| ||||||||    
T  47226099 ttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 47226037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 12139364 - 12139422
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttatttt 79  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  12139364 gacccaccatctatt-ttttgtgtctatctctctccaacttgcaaaacttcatttatttt 12139422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 47271170 - 47271109
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    ||||||||||||||||||||||||||| ||||||||||||||||   ||||||| ||||||||    
T  47271170 ttttgtgtctatctctctccaaattgc-aaactccatttattttgctaaatggagaggatctt 47271109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 989181 - 989239
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggat 95  Q
    ||||||||||||||||||||||||||| |||||||||||| |||  |||||||| |||||    
T  989181 ttttgtgtctatctctctccaaattgc-aaactccatttaatttgtcaaatggagaggat 989239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 29631100 - 29631164
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    ||||||||||||||||   ||||||||||| |||||||||||||| |||||||| ||||| |||||||    
T  29631100 ttttgtgtctatctctt--caaattgcaaa-ctccatttattttaccaaatggagaggatattaaccc 29631164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 39855851 - 39855770
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||| || || |||||||||||||||||||||| | |||||||||||| |||  |||||| | || ||||||||||    
T  39855851 gaccgaccatctttt-ttatgtgtctatctctctccaaattac-aaactccatttaatttgtcaaatgaagagaatcttaaccc 39855770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 14696785 - 14696752
Alignment:
Q  31 tattcttttgtgtctatctctctccaaattgcaa 64  Q
    |||| |||||||||||||||||||||||||||||    
T  14696785 tatttttttgtgtctatctctctccaaattgcaa 14696752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 19027722 - 19027681
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattg 61  Q
    |||| ||||| |||| ||||||||||||||||||||||||||    
T  19027722 gacccaccatttatttttttgtgtctatctctctccaaattg 19027681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 20726914 - 20726955
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattg 61  Q
    |||| ||||| |||| ||||||||||||||||||||||||||    
T  20726914 gacccaccatttatttttttgtgtctatctctctccaaattg 20726955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 32520357 - 32520324
Alignment:
Q  31 tattcttttgtgtctatctctctccaaattgcaa 64  Q
    |||| |||||||||||||||||||||||||||||    
T  32520357 tatttttttgtgtctatctctctccaaattgcaa 32520324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 25084766 - 25084719
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaact 68  Q
    |||| |||||||||| |||||||||||||||||||||| || |||||||    
T  25084766 gacccaccatctatt-ttttgtgtctatctctctccaacttacaaaact 25084719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 32916008 - 32916067
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatc 96  Q
    |||||||||||||||||| |||||||| |  |||||||||||||| ||||  |||||||||    
T  32916008 ttttgtgtctatctctcttcaaattgc-atcctccatttattttaccaaacagaaaggatc 32916067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 35737165 - 35737193
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  35737165 ttttgtgtctatctctctccaaattgcaa 35737193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 47080481 - 47080509
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  47080481 ttttgtgtctatctctctccaaattgcaa 47080509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 47799923 - 47799895
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  47799923 ttttgtgtctatctctctccaaattgcaa 47799895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 9e-33; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 18976338 - 18976259
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  18976338 accatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaacccg 18976259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 1228571 - 1228495
Alignment:
Q  28 atctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  1228571 atctattcttttgtgtctgtctctctccaaattgcaaaactccatttattttagtaaatgaagaggatcttaacccg 1228495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 50484428 - 50484505
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  50484428 accatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 50484505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 12380900 - 12380833
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  12380900 ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12380833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 12384967 - 12384900
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  12384967 ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12384900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 45978042 - 45978124
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||| || |||||||| ||||    
T  45978042 gacccaccatctatt-ttttgtatctatctctctccaacttgcaaaactccatttattttatcaaatagagaggatcttcaccc 45978124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 50294101 - 50294019
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||||||||||||||||| ||||||| |||||||||||||  |||||| | |||||||| ||||    
T  50294101 gacccaccatctatt-ttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatgaagaggatcttcaccc 50294019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 23861985 - 23861932
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttatttt 79  Q
    |||||||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  23861985 accatctatt-ttttgtgtctatctctctccaacttgcaaaacttcatttatttt 23861932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 48327187 - 48327110
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||| |||| ||||||||||||||||| ||||||| |||||||||||||  |||||||| | |||||| ||||    
T  48327187 accatctattttttt-tgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatcttcaccc 48327110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 12151819 - 12151887
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||| ||||||||||| | |||||||||||||||||||  |||||||| | |||||| |||||    
T  12151819 ttttgtgtctttctctctccaactggcaaaactccatttattttgccaaatggagaagatcttcacccg 12151887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 40328315 - 40328389
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    |||| ||||||||||  ||||||||||||||||  ||| |||||||||||||||||||||  |||||||| ||||||||    
T  40328315 gacccaccatctatt--tttgtgtctatctctc--caatttgcaaaactccatttattttgccaaatggagaggatctt 40328389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 7840700 - 7840635
Alignment:
Q  38 ttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||||||||| || |||||||||||||||| |  |||||| | |||||||| ||||    
T  7840700 ttgtgtctatctctctccaacttacaaaactccatttattctgccaaatgaataggatcttcaccc 7840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 30860799 - 30860749
Alignment:
Q  29 tctattcttttgtgtctatctctctccaaattgcaaaactccatttatttt 79  Q
    |||||| |||| ||||||| ||||||||| ||||||||||||||| |||||    
T  30860799 tctatttttttatgtctatatctctccaacttgcaaaactccattcatttt 30860749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 32361340 - 32361271
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggat 95  Q
    ||||||||| |||||||||| |||||||||||| || |||||||| | |||||| | |||||||| |||||    
T  32361340 accatctat-cttttgtgtccatctctctccaacttacaaaactctaattatttcaccaaatggagaggat 32361271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 18107349 - 18107316
Alignment:
Q  31 tattcttttgtgtctatctctctccaaattgcaa 64  Q
    |||| |||||||||||||||||||||||||||||    
T  18107349 tatttttttgtgtctatctctctccaaattgcaa 18107316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 30077667 - 30077639
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  30077667 ttttgtgtctatctctctccaaattgcaa 30077639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 48084856 - 48084940
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  48084856 gacccaccatctattcttttgtgtctatctctccccaaattgcaaaactcaatttattttagcaaatggagaggatcttaacccg 48084940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 27033688 - 27033770
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| | |||||||||||||||||||| |||||||||||||||||||||| |||||||| | |||||| ||||    
T  27033688 gacccaccatctatt-tcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 27033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 24754699 - 24754778
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccgg 105  Q
    |||||||||| || ||||||||||||||||||| ||| |||||||||||||||||  |||||||| |||||||| ||||||    
T  24754699 accatctatt-ttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcacccgg 24754778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 24763696 - 24763775
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccgg 105  Q
    |||||||||| || ||||||||||||||||||| ||| |||||||||||||||||  |||||||| |||||||| ||||||    
T  24763696 accatctatt-ttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcacccgg 24763775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 19830469 - 19830387
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||||||| |||| |||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  19830469 gacccaccatctatt-ttttgtgtctatttctccccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 19830387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 43719970 - 43719903
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||||||||||| |||||||||||||||||||||   ||||||| |||||||| ||||    
T  43719970 ttttgtgtctatctctctccaacttgcaaaactccatttattttgttaaatggagaggatcttcaccc 43719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 40851816 - 40851888
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    |||||||||| |||||||||||||| ||||||| |||||||||||||||||||||  ||||| || ||||||||    
T  40851816 accatctatt-ttttgtgtctatctttctccaacttgcaaaactccatttattttgtcaaattgagaggatctt 40851888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 2230027 - 2230094
Alignment:
Q  27 catctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggat 95  Q
    |||||||| |||||||||||||||||||||| ||||||||||||| |||||||  |||||||| |||||    
T  2230027 catctatt-ttttgtgtctatctctctccaacttgcaaaactccaattattttgccaaatggagaggat 2230094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 566806 - 566732
Alignment:
Q  26 ccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaac 101  Q
    |||| |||| |||||| |||||||||||||||||||| ||||||||||||||||  |||||| ||| |||||||||    
T  566806 ccatatatttttttgtatctatctctctccaaattgc-aaactccatttattttgccaaatgtaaatgatcttaac 566732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 34373868 - 34373950
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||||||||||||||||| ||||||||| | |||||||||  |||||||| || ||||| ||||    
T  34373868 gacccaccatctatt-ttttgtgtctatctctctccaacttgcaaaacacaatttattttgccaaatggagagaatcttcaccc 34373950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 46167445 - 46167488
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttatttt 79  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  46167445 ttttgtgtctatctctctccaacttacaaaactccatttatttt 46167488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 40809581 - 40809529
Alignment:
Q  50 ctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||| ||||||| ||||||||||||||||||| | |||||||||||    
T  40809581 ctctccaaattgtaaaactcaatttattttagcaaatggaga-gatcttaaccc 40809529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 24647905 - 24647957
Alignment:
Q  51 tctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    ||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  24647905 tctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 24647957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 40810394 - 40810353
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattg 61  Q
    |||| ||||||||||||||| ||| |||||||||||||||||    
T  40810394 gacccaccatctattcttttttgtttatctctctccaaattg 40810353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 3009273 - 3009340
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||| |||||||||||||||||||||| ||  ||||||||||||   ||||||| |||||||| |||||    
T  3009273 ttttttgtctatctctctccaaattgc-aacttccatttatttttataaatggagaggatctttacccg 3009340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 12403025 - 12403061
Alignment:
Q  43 tctatctctctccaaattgcaaaactccatttatttt 79  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  12403025 tctatctctctccaacttgcaaaactctatttatttt 12403061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 28229425 - 28229358
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||||| ||| ||| ||||||| | ||||||||||||||  ||||||| ||||||| ||||||    
T  28229425 ttttgtgtctatatctttcctaattgcaca-ctccatttattttaataaatggagaggatctcaacccg 28229358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 31523691 - 31523663
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  31523691 ttttgtgtctatctctctccaaattgcaa 31523663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 33632877 - 33632940
Alignment:
Q  39 tgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||||||||||||| |  ||||||||||| || |||||||| | |||||| ||||    
T  33632877 tgtgtctatctctctccaaattgc-atgctccatttattataccaaatggagaagatctttaccc 33632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 49679293 - 49679265
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  49679293 ttttgtgtctatctctctccaaattgcaa 49679265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 8e-30; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 227602 - 227524
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  227602 gacccaccatctattcttttgtgtctatctctctccaaaatgcaaaactccatttattttagcaaatggagaggatctt 227524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 13888556 - 13888478
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| || || |||||||||||||    
T  13888556 accatctattattttgtgtatatctctctccaaattgcaaaactctatttattttagcatattgagaggatcttaaccc 13888478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 4804485 - 4804567
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||||||||||||||||| ||| |||||||||||||||||  |||||||| |||||||| ||||    
T  4804485 gacccaccatctatt-ttttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcaccc 4804567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 7162121 - 7162203
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| | |||||||||||||||||||| |||||||||||||||||||||| |||||||| | |||||| ||||    
T  7162121 gacccaccatctatt-tcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 7162203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 21159407 - 21159325
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||||||| ||||||||| |||||||||| ||||||||||| |||||||| |||||||| ||||    
T  21159407 gacccaccatctatt-ttttgtgtctatttctctccaacttgcaaaacttcatttattttaacaaatggagaggatcttcaccc 21159325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 13089772 - 13089704
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||||||||||||||| ||||||||| |||||||||||  |||||||| |||||||| |||||    
T  13089772 ttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagaggatcttcacccg 13089704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 1516239 - 1516162
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||| |||||| || |||||||||||||||||||| |||||||||||||  |||||||| ||||||||||||||    
T  1516239 accatctatt-ttttgtatccatctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaacccg 1516162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 1518328 - 1518251
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||| |||||| || |||||||||||||||||||| |||||||||||||  |||||||| ||||||||||||||    
T  1518328 accatctatt-ttttgtatccatctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaacccg 1518251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 12412674 - 12412756
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| | |||||||||||||||||||| |||||||||||||||||||||  |||||||| | |||||| ||||    
T  12412674 gacccaccatctatt-tcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaagatctttaccc 12412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 17944199 - 17944281
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||||||||||||||||| || ||||||||||||||||||  |||||| | |||||||| ||||    
T  17944199 gacctaccatctatt-ttttgtgtctatctctctccaacttacaaaactccatttattttgccaaatgaagaggatcttcaccc 17944281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 32737899 - 32737976
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||| ||||||||||||||||||||||  |||||||||| |||||||||  |||||||| |||||||| ||||    
T  32737899 accatctatt-ttttgtgtctatctctctccaacctgcaaaactctatttattttgccaaatggagaggatcttcaccc 32737976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 30460876 - 30460943
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||||||| |||||||||||| ||||||||||||||||  |||||||| | ||| ||||||||    
T  30460876 ttttgtgtctatctttctccaaattgc-aaactccatttattttgtcaaatggagatgatgttaacccg 30460943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 1249171 - 1249109
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    |||| ||||| ||||||||||| || ||||||||||||||||||  |||||||| ||||||||    
T  1249171 ttttttgtctgtctctctccaacttacaaaactccatttattttgccaaatggagaggatctt 1249109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 1515574 - 1515498
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||| |||| | || |||||||||||||||||||| |||||||||||||  ||||| || |||||||||||||    
T  1515574 accatctattttttt-tatccatctctctccaaattgcaaa-ctccatttattttgccaaattgataggatcttaaccc 1515498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 27826575 - 27826652
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    |||| |||||||||| ||||||||||||||||||| |  ||||||| || || |||||||| |||||||| ||||||||    
T  27826575 gacccaccatctatt-ttttgtgtctatctctctcaaccttgcaaatcttcagttattttaccaaatggagaggatctt 27826652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 29229149 - 29229204
Alignment:
Q  39 tgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggat 95  Q
    |||||||||||||||||||||||| | |||||||||||| || |||||||| |||||    
T  29229149 tgtgtctatctctctccaaattgc-atactccatttattataccaaatggagaggat 29229204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 28696678 - 28696626
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatgga 89  Q
    |||| |||||||||||||||||||||| |||||| |||||||||  ||||||||    
T  28696678 ttttttgtctatctctctccaaattgc-aaactcaatttattttgccaaatgga 28696626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 2142316 - 2142288
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  2142316 ttttgtgtctatctctctccaaattgcaa 2142288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 2800631 - 2800567
Alignment:
Q  39 tgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||||||||||||   |  |||||| |||||| |||||||| |||||| ||||||    
T  2800631 tgtgtctatctctctccaaattgtgtatttccattaattttatcaaatggagaggatcctaaccc 2800567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 7215872 - 7215816
Alignment:
Q  39 tgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggat 95  Q
    |||||||||||||||||||||||   |  ||||||||||||| |||||||| |||||    
T  7215872 tgtgtctatctctctccaaattgtgcacttccatttattttatcaaatggagaggat 7215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 17828588 - 17828525
Alignment:
Q  39 tgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||||||||||||| | |||||| ||||| || |||||| | |||||||| ||||    
T  17828588 tgtgtctatctctctccaaattgc-atactccaattattataccaaatgtagaggatctttaccc 17828525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 24484931 - 24484959
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  24484931 ttttgtgtctatctctctccaaattgcaa 24484959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 47922405 - 47922324
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaac 101  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  47922405 gacccaccatctattcttttgtgtctatatctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaac 47922324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 23610677 - 23610761
Alignment:
Q  18 atgaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||| ||||    
T  23610677 atgacccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagaggatcttcaccc 23610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 12312509 - 12312425
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccgggtac 109  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||||||||    
T  12312509 accatctatttttttttgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccgggtac 12312425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 19901956 - 19901874
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||| ||||    
T  19901956 gacccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 19901874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 34927522 - 34927604
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||| |||| ||||||||    
T  34927522 gacccaccatctattcttttgtgtctatctctctttaaattgcaaaaccccatttattttagtaaatggagagga-cttaaccc 34927604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 56558316 - 56558398
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  56558316 gacccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 56558398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 12153206 - 12153274
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| |||||    
T  12153206 ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccg 12153274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 33247163 - 33247084
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccgg 105  Q
    |||||||||| | |||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||||    
T  33247163 accatctatt-tcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccgg 33247084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 5416489 - 5416422
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  5416489 ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 5416422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 34778463 - 34778535
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||  |||||||| ||||||||    
T  34778463 accatctatt-ttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatggagaggatctt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 3952208 - 3952126
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||  |||||||| |||||||| ||||    
T  3952208 gacccaccatctattttttt-tgtctatctctctccaacttgccaaactccatttattttgccaaatggagaggatcttcaccc 3952126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 26429010 - 26429061
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttat 76  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  26429010 accatctattcttttgtgtctatctttctccaaattgcaaaacttcatttat 26429061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 39862559 - 39862637
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||| ||||||||||||||||||| || |||||||| || |||||||||| |||||||| |||||||| |||||    
T  39862559 accatctatt-ttttgtgtctatctctctcaaacttgcaaaattctatttattttatcaaatggagaggatcttcacccg 39862637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 30567938 - 30568006
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatgga 89  Q
    |||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||  ||||||||    
T  30567938 gacccaccatctatt-ttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatgga 30568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 18207078 - 18206996
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||| |||||||||||||| || |||||||||| ||||||||||  |||||||| |||||||| ||||    
T  18207078 gacccaccatctattttttt-tgtctatctctctctaacttgcaaaactacatttattttgtcaaatggagaggatcttcaccc 18206996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 52018815 - 52018882
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||| ||||||||||||||| |||||||||||||||||||||   ||||||| |||||||| ||||    
T  52018815 ttttgtatctatctctctccaacttgcaaaactccatttattttgctaaatggagaggatcttcaccc 52018882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 5763200 - 5763118
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||| ||||||||||||||| ||| |||||||||| ||||||  ||||| || |||||||| ||||    
T  5763200 gacccaccatctatt-ttttgtttctatctctctccaacttgtaaaactccatatattttgccaaattgagaggatcttcaccc 5763118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 24073653 - 24073735
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| | |||||||||||||||||||| || |||| |||||||||||||  |||||||  |||||||| ||||    
T  24073653 gacccaccatctatt-tgttgtgtctatctctctccaacttacaaatctccatttattttgccaaatggggaggatcttcaccc 24073735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 33262585 - 33262507
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||| ||||||||||||||||||| || ||||||||| | |||||||||  ||||| || |||||||| |||||    
T  33262585 accatctatt-ttttgtgtctatctctctctaacttgcaaaacacaatttattttgccaaatagagaggatcttcacccg 33262507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 33524314 - 33524381
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||| ||||||||||||||| || |||| |||||||||||||  |||||||| |||||||| ||||    
T  33524314 ttttgtatctatctctctccaacttccaaatctccatttattttgccaaatggagaggatcttcaccc 33524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 38079758 - 38079676
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| | ||||||||||||||||| || | |||||||||||||||||||   ||||||| |||||||| ||||    
T  38079758 gacccaccatctatt-tcttgtgtctatctctctcaaactagcaaaactccatttattttgttaaatggagaggatcttcaccc 38079676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 33841827 - 33841768
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatc 96  Q
    ||||||||||||||||||||||||||  | |||||||||| |||| |||||||| ||||||    
T  33841827 ttttgtgtctatctctctccaaattg-tatactccatttactttaacaaatggagaggatc 33841768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 36532680 - 36532741
Alignment:
Q  39 tgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaac 101  Q
    |||||||||||||||| ||||||  || |||||||||||||| || ||||| |||||||||||    
T  36532680 tgtgtctatctctctctaaattgtgaa-ctccatttattttatcagatggagaggatcttaac 36532741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 17493050 - 17493083
Alignment:
Q  31 tattcttttgtgtctatctctctccaaattgcaa 64  Q
    |||| |||||||||||||||||||||||||||||    
T  17493050 tatttttttgtgtctatctctctccaaattgcaa 17493083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 1871329 - 1871388
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatc 96  Q
    |||| |||||||||||||||||||||| | ||||||||||||||  ||||| || ||||||    
T  1871329 ttttttgtctatctctctccaaattgc-atactccatttattttgtcaaattgagaggatc 1871388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 5361478 - 5361506
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  5361478 ttttgtgtctatctctctccaaattgcaa 5361506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 36688211 - 36688183
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  36688211 ttttgtgtctatctctctccaaattgcaa 36688183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 56269099 - 56269071
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  56269099 ttttgtgtctatctctctccaaattgcaa 56269071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 45113307 - 45113390
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  45113307 gacccaccatctattcttttgtgtctatgtctctccaaattgcaaaacacaatttattttagcaaatggagaggatcttaaccc 45113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 6014238 - 6014311
Alignment:
Q  27 catctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6014238 catctattcttttgtgtctatctttctccaaattgcaaaactctatttattttagcaaatggagaggatcttaa 6014311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 5033310 - 5033371
Alignment:
Q  42 gtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||| ||||    
T  5033310 gtctatctctctccaacttgcaaaactccatttattttgccaaatggaaaggatcttcaccc 5033371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 10652657 - 10652573
Alignment:
Q  18 atgaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||| |||||| ||| |||||| ||||||||||||||| ||||||||| |||||||||||| |||||||| |||||||| ||||    
T  10652657 atgacccaccatcaatt-ttttgtatctatctctctccaacttgcaaaacaccatttattttaccaaatggagaggatcttcaccc 10652573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 28069756 - 28069838
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||  |||||||| |||||||| ||||    
T  28069756 gacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 28069838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 30426707 - 30426625
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||||||||||||||||| ||||||||| |||||||||||  |||||||| ||| |||| ||||    
T  30426707 gacccaccatctatt-ttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagagggtcttcaccc 30426625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 36991413 - 36991476
Alignment:
Q  41 tgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| |||||    
T  36991413 tgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccg 36991476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 10672545 - 10672470
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||| |||||||||||||||||  ||| |||||||||||||||||||||  |||||||| || ||||| ||||    
T  10672545 accatctatt-ttttgtgtctatctctc--caacttgcaaaactccatttattttgccaaatggagagaatcttcaccc 10672470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 37966466 - 37966400
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||| ||||||||| |||||||||||  ||||||||||||  |||||||| |||||||||||||    
T  37966466 ttttgtgtttatctctcttcaaattgcaaat-tccatttattttgccaaatggagaggatcttaaccc 37966400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 44859186 - 44859130
Alignment:
Q  42 gtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    ||||||||||||| || |||||||||||||||||||||  ||||| || ||||||||    
T  44859186 gtctatctctctctaacttgcaaaactccatttattttgtcaaatagagaggatctt 44859130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 40695285 - 40695228
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttatttt 79  Q
    |||| |||||||||| |||||||||||||||||||||| || | ||||||||||||||||    
T  40695285 gacctaccatctatt-ttttgtgtctatctctctccaactt-ccaaactccatttatttt 40695228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 28318919 - 28318869
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaat 86  Q
    |||| ||| |||||||||| || |||||||||||||||||||||| |||||    
T  28318919 ttttttgtatatctctctcaaacttgcaaaactccatttattttaccaaat 28318869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 17867687 - 17867654
Alignment:
Q  31 tattcttttgtgtctatctctctccaaattgcaa 64  Q
    |||| |||||||||||||||||||||||||||||    
T  17867687 tatttttttgtgtctatctctctccaaattgcaa 17867654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 1937177 - 1937149
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  1937177 ttttgtgtctatctctctccaaattgcaa 1937149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 26749571 - 26749543
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  26749571 ttttgtgtctatctctctccaaattgcaa 26749543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 41511321 - 41511357
Alignment:
Q  43 tctatctctctccaaattgcaaaactccatttatttt 79  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  41511321 tctatctctttccaacttgcaaaactccatttatttt 41511357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 11775835 - 11775907
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||    
T  11775835 accatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatctt 11775907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 37266766 - 37266850
Alignment:
Q  18 atgaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  37266766 atgacccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 37266850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 35660647 - 35660564
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| |||||    
T  35660647 gacccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccg 35660564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 13032160 - 13032237
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||| | |||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  13032160 accatctatt-tcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 13032237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 4895773 - 4895715
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttatttt 79  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  4895773 gacccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttatttt 4895715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 14349840 - 14349922
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||||| ||||||||||| || ||||||||||||||||||| ||||| || |||||||| ||||    
T  14349840 gacccaccatctatt-ttttgtgtctgtctctctccaacttacaaaactccatttattttaccaaatagagaggatcttcaccc 14349922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 18625459 - 18625377
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||  |||||||| |||||||| ||||    
T  18625459 gacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 18625377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 32129655 - 32129573
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| ||| |||||||||||||||||| ||  |||||||||||||||||  |||||||| |||||||| ||||    
T  32129655 gacccaccatctatt-tttggtgtctatctctctccaacttataaaactccatttattttgccaaatggagaggatcttcaccc 32129573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 43309160 - 43309210
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaat 86  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| |||||    
T  43309160 ttttatgtctatctctctccaacttgcaaaactccatttattttatcaaat 43309210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 29341050 - 29341114
Alignment:
Q  39 tgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||||||||||||||||||||||| | |||||||||||| || |||||||| |||||||| |||||    
T  29341050 tgtgtctatctctctccaaattgc-atactccatttattataccaaatggagaggatctttacccg 29341114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 3057468 - 3057535
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaacccg 104  Q
    |||| ||||||||||||||| ||||| ||||||| ||||||||||  ||||||| ||||||||||||||    
T  3057468 ttttttgtctatctctctccgaattg-aaaactctatttattttacaaaatggagaggatcttaacccg 3057535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 39902452 - 39902534
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| | |||||| ||||||||||||| ||| |||||||||||||||||  |||||||| |||| ||| ||||    
T  39902452 gacccaccatctatt-tcttgtgtttatctctctccaacttgtaaaactccatttattttgtcaaatggagaggaacttcaccc 39902534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 34827234 - 34827287
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttatttt 79  Q
    |||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||    
T  34827234 accatctattttttt-tgtctatctctctccaacttgcataactccatttatttt 34827287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 9460655 - 9460599
Alignment:
Q  39 tgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatc 96  Q
    |||||||||||||||||||||||| | |||| |||||||||| |||||||| ||||||    
T  9460655 tgtgtctatctctctccaaattgc-atactctatttattttaccaaatggagaggatc 9460599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 18653413 - 18653455
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttatttt 79  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  18653413 ttttgtgtctatctctcttcaaattgc-aaactccatttatttt 18653455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 40753185 - 40753118
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||||||||||||| ||||||| ||||||||||  |||||||||  ||||| || |||||||| ||||    
T  40753185 ttttgtgtctatctttctccaacttgcaaaactttatttattttgccaaatagagaggatcttcaccc 40753118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 8441004 - 8440951
Alignment:
Q  25 accatctattcttttgtgtctatctctctccaaattgcaaaactccatttatttt 79  Q
    |||||||||| ||| ||||||||||  |||||| |||||||||||||||||||||    
T  8441004 accatctatt-tttggtgtctatctacctccaacttgcaaaactccatttatttt 8440951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 31653090 - 31653153
Alignment:
Q  39 tgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    ||||| |||||||||||||||||| | || ||||||||| || |||||||| |||||||| ||||    
T  31653090 tgtgtttatctctctccaaattgc-atacgccatttattataccaaatggataggatctttaccc 31653153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 36290654 - 36290682
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  36290654 ttttgtgtctatctctctccaaattgcaa 36290682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 41660158 - 41660186
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaa 64  Q
    |||||||||||||||||||||||||||||    
T  41660158 ttttgtgtctatctctctccaaattgcaa 41660186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 208100 - 208182
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||||||| ||||||||||||| |||||||||||||||||||||  |||||||| |||||||| ||||    
T  208100 gacccaccatctatt-ttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 208182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 7184 - 7241
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattt 78  Q
    |||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  7184 gacccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattt 7241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 13716 - 13799
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| |||| ||||||||||||||||| | ||||||||| |||||||||  |||||||| | |||||| ||||    
T  13716 gacccaccatctatttttttttgtctatctctctccaactagcaaaactctatttattttgccaaatggagaagatcttcaccc 13799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 16420 - 16377
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttatttt 79  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  16420 ttttgtgtctatctctctccaacttgcaaaactccatttatttt 16377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 9239 - 9157
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatcttaaccc 103  Q
    |||| |||||||||| || ||||||||||||||||||| ||||||| |||||||||||||  |||||||| | |||||| ||||    
T  9239 gacccaccatctatt-ttctgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatcttcaccc 9157  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 73880 - 73818
Alignment:
Q  36 ttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctt 98  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||  ||||| || ||||||||    
T  73880 ttttgcgtctatctctctccaacttgcaaaacaccatttattttgccaaatagagaggatctt 73818  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 6473 - 6395
Alignment:
Q  20 gaccgaccatctattcttttgtgtctatctctctccaaattgcaaaactccatttattttagcaaatggaaaggatctta 99  Q
    |||| |||||||||| |||||||||| ||||| ||||| ||||||||  ||||||||||||  |||| || |||||||||    
T  6473 gacccaccatctatt-ttttgtgtctgtctctttccaacttgcaaaatcccatttattttacgaaatagagaggatctta 6395  T

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Target: scaffold0664 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 4728 - 4695
Alignment:
Q  31 tattcttttgtgtctatctctctccaaattgcaa 64  Q
    |||| |||||||||||||||||||||||||||||    
T  4728 tatttttttgtgtctatctctctccaaattgcaa 4695  T

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