View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8710_low_10 (Length: 355)
Name: NF8710_low_10
Description: NF8710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8710_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 29 - 324
Target Start/End: Complemental strand, 9688024 - 9687729
Alignment:
| Q |
29 |
gtatcatagatatagtatgccattcttttattaatatcataaatttgtttcatcatggtcctatgtataattttaattggtgatttttattcaggtgacc |
128 |
Q |
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| T |
9688024 |
gtatcatagatataatatgccattcttttattaatatcataaatttgtttcaccatggtcctatgtataattttaattggtgatttttattcaggtgacc |
9687925 |
T |
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| Q |
129 |
attatgaggctcaaggttgatcttgagtgtgagaaatgctacaagaaggttaggaagcttctcaacaagtaccctcgtgagttcatcacctctacttcat |
228 |
Q |
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| T |
9687924 |
attatgaggctcaaggttgatcttgagtgtgagaaatgctacaagaaggttaggaagcttctcaacaagtaccctcgtgagttcatcacctctacttcat |
9687825 |
T |
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| Q |
229 |
ttctaaatatttgacacatacatataagttatttattgctttattagaacttgtcgcactgaaaatcaaaaacatttgtatacatttggatttacc |
324 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
9687824 |
ttctaaatatttgacacatacatataagttatttattgctttattagaacttgtggcactgaaaatcaaaaacatttgtatacatttggatttacc |
9687729 |
T |
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