View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8710_low_8 (Length: 381)
Name: NF8710_low_8
Description: NF8710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8710_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 18 - 366
Target Start/End: Original strand, 18693581 - 18693929
Alignment:
| Q |
18 |
aaatatgaatccatggttataccagagcatatagagttgcatatcaaggacaaaagacagtgatagtaacaagtaatcatgaaggagttgcataaatttt |
117 |
Q |
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| T |
18693581 |
aaatatgaatccatggttataccagagcatatagagttgcatatcaaggacaaaagacagtgatagtaacaagtaatcatgaaggagttgcataaatttt |
18693680 |
T |
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| Q |
118 |
attcagcaaaagaaaacatataaataataatcatgaattttcatatcaaaagtattctttctattttaaactgatataacaacttcgattcaactgaaca |
217 |
Q |
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| T |
18693681 |
attcagcaaaagaaaacatataaataataatcatgaattttcatatcaaaagtattctttctattttaaactgatataacaacttcgattcaactgaaca |
18693780 |
T |
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| Q |
218 |
acacccccggatacattcttatgatacaacatacaacaaaatctttgcaaacttgtcacctgaatccatttcaacaaaatgctctattcttgctccatct |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18693781 |
acacccccggatacattcttatgatacaacatacaacaaaatctttgcaaacttgtcacctgaatccatttcaacaaaatgctctattcttgctccatct |
18693880 |
T |
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| Q |
318 |
ttccaatgcaaaacagattctggtcgttgcttccctttccaatacacag |
366 |
Q |
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| T |
18693881 |
ttccaatgcaaaacagattctggtcgttgcttccctttcaaatacacag |
18693929 |
T |
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