View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8715_high_3 (Length: 264)
Name: NF8715_high_3
Description: NF8715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8715_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 47371209 - 47371450
Alignment:
| Q |
1 |
agaaaaagctaataatgttctgtggttatggggagaatggtaaattgtggcttatggggacttcaaccttcataaggtttgagtaaactacaaacctagt |
100 |
Q |
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| T |
47371209 |
agaaaaagctaataatgttctgtggttatggggagaatggtaaattgtggcttatggggacttcaaccttcataaggtttgagtaaactacaaacctact |
47371308 |
T |
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| Q |
101 |
acactaccnnnnnnnnnnctagaaacctacttgtattaatatttttcctaaatagtatggcatgtaatgtatgtagcagctgaaaagcagtgacattaga |
200 |
Q |
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| T |
47371309 |
gcactaccaaaaaaaaaactagaaacctacttgtattaatatttttcctaaatagtatggcatgtaatgtatgtagcagctgaaaagcagtgacattaga |
47371408 |
T |
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| Q |
201 |
tacattacctaccaataggagcagaccagaacctgaaccctc |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
47371409 |
tacattacctaccaataggagcagaccagaacctgaaccctc |
47371450 |
T |
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