View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8720_low_9 (Length: 240)

Name: NF8720_low_9
Description: NF8720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8720_low_9
NF8720_low_9
[»] chr1 (66 HSPs)
chr1 (3-222)||(945532-945751)
chr1 (3-222)||(25059153-25059372)
chr1 (3-222)||(2978471-2978688)
chr1 (3-222)||(2975083-2975300)
chr1 (3-219)||(19996515-19996731)
chr1 (3-222)||(19506435-19506655)
chr1 (1-213)||(7842616-7842825)
chr1 (1-222)||(32835347-32835568)
chr1 (3-222)||(610762-610981)
chr1 (6-222)||(21260584-21260800)
chr1 (3-222)||(28221020-28221238)
chr1 (3-195)||(424623-424815)
chr1 (6-222)||(12560452-12560668)
chr1 (22-222)||(13796908-13797108)
chr1 (3-222)||(29054441-29054661)
chr1 (3-222)||(44327768-44327985)
chr1 (3-222)||(9222295-9222514)
chr1 (35-186)||(38491512-38491663)
chr1 (3-222)||(25815161-25815382)
chr1 (3-221)||(13312785-13313005)
chr1 (3-130)||(29512141-29512268)
chr1 (1-222)||(43634342-43634566)
chr1 (35-222)||(42068962-42069149)
chr1 (3-222)||(35978345-35978565)
chr1 (35-206)||(27783581-27783752)
chr1 (35-222)||(48964204-48964391)
chr1 (36-220)||(33794236-33794420)
chr1 (8-206)||(35659607-35659805)
chr1 (9-162)||(3821171-3821325)
chr1 (3-140)||(236417-236556)
chr1 (3-140)||(4893209-4893348)
chr1 (3-140)||(20415020-20415159)
chr1 (3-140)||(29185139-29185278)
chr1 (3-130)||(973561-973690)
chr1 (5-127)||(31646230-31646352)
chr1 (3-139)||(46772403-46772539)
chr1 (3-159)||(31107547-31107702)
chr1 (3-140)||(33362812-33362951)
chr1 (3-114)||(8981509-8981624)
chr1 (1-114)||(32133519-32133633)
chr1 (26-115)||(40044992-40045080)
chr1 (1-65)||(10786267-10786331)
chr1 (1-132)||(16176997-16177129)
chr1 (3-140)||(50099865-50100003)
chr1 (13-95)||(2465517-2465599)
chr1 (3-127)||(39026793-39026918)
chr1 (3-154)||(2501625-2501776)
chr1 (3-140)||(9473000-9473139)
chr1 (22-157)||(45816510-45816644)
chr1 (3-115)||(48662709-48662823)
chr1 (13-95)||(30622963-30623044)
chr1 (6-107)||(40094471-40094575)
chr1 (3-114)||(48985182-48985295)
chr1 (41-114)||(22580017-22580090)
chr1 (7-127)||(35738942-35739063)
chr1 (77-156)||(32888378-32888457)
chr1 (3-127)||(35949530-35949656)
chr1 (3-127)||(48796589-48796715)
chr1 (164-222)||(2433425-2433483)
chr1 (3-135)||(7121053-7121187)
chr1 (3-63)||(47662327-47662388)
chr1 (6-63)||(31873297-31873355)
chr1 (3-127)||(28192424-28192549)
chr1 (3-63)||(30489718-30489779)
chr1 (3-66)||(2433314-2433377)
chr1 (3-127)||(29426242-29426369)
[»] chr5 (38 HSPs)
chr5 (6-222)||(6224681-6224897)
chr5 (3-222)||(29455844-29456063)
chr5 (3-222)||(31149530-31149749)
chr5 (1-222)||(22632082-22632301)
chr5 (3-222)||(14087716-14087935)
chr5 (3-222)||(18595414-18595633)
chr5 (3-193)||(41983301-41983491)
chr5 (3-222)||(7978084-7978304)
chr5 (3-222)||(14088321-14088540)
chr5 (3-222)||(1061001-1061225)
chr5 (3-182)||(4572321-4572500)
chr5 (6-222)||(15719027-15719246)
chr5 (3-222)||(14645368-14645588)
chr5 (3-222)||(41616637-41616856)
chr5 (4-133)||(36323077-36323205)
chr5 (6-139)||(3049685-3049820)
chr5 (3-140)||(34718699-34718838)
chr5 (3-140)||(41692383-41692522)
chr5 (3-95)||(24489035-24489127)
chr5 (11-157)||(6311041-6311190)
chr5 (4-140)||(639278-639415)
chr5 (3-127)||(19254417-19254542)
chr5 (4-203)||(23141478-23141677)
chr5 (3-140)||(19549403-19549543)
chr5 (3-140)||(6277728-6277867)
chr5 (8-136)||(25694596-25694725)
chr5 (3-127)||(35853575-35853700)
chr5 (3-140)||(16186821-16186960)
chr5 (3-120)||(16620250-16620368)
chr5 (3-135)||(32302442-32302576)
chr5 (3-127)||(38309829-38309954)
chr5 (41-203)||(30867-31029)
chr5 (3-114)||(5657662-5657775)
chr5 (164-222)||(36470336-36470394)
chr5 (17-107)||(4901892-4901984)
chr5 (3-66)||(36470442-36470505)
chr5 (6-127)||(30774863-30774985)
chr5 (3-127)||(35935359-35935485)
[»] chr3 (59 HSPs)
chr3 (3-222)||(11671785-11671997)
chr3 (25-222)||(23298168-23298365)
chr3 (16-222)||(39952573-39952779)
chr3 (3-222)||(5040894-5041113)
chr3 (3-222)||(12905663-12905882)
chr3 (4-222)||(40563992-40564210)
chr3 (1-222)||(48080108-48080321)
chr3 (17-222)||(25467552-25467757)
chr3 (9-206)||(22844986-22845183)
chr3 (6-222)||(50508712-50508928)
chr3 (3-137)||(19873141-19873275)
chr3 (3-203)||(2150540-2150738)
chr3 (3-222)||(24987247-24987466)
chr3 (3-222)||(39352509-39352727)
chr3 (3-186)||(19618733-19618916)
chr3 (3-222)||(49360010-49360222)
chr3 (3-222)||(6408622-6408842)
chr3 (2-206)||(50480926-50481124)
chr3 (6-102)||(33558750-33558846)
chr3 (3-222)||(41924017-41924237)
chr3 (3-221)||(44792479-44792702)
chr3 (6-203)||(35203302-35203496)
chr3 (49-222)||(13735475-13735648)
chr3 (3-129)||(35688350-35688478)
chr3 (3-140)||(45079126-45079265)
chr3 (3-140)||(41410179-41410317)
chr3 (3-140)||(30247975-30248114)
chr3 (3-115)||(42881387-42881498)
chr3 (6-140)||(27346619-27346753)
chr3 (3-140)||(42096663-42096802)
chr3 (3-139)||(32995282-32995420)
chr3 (3-115)||(54444342-54444455)
chr3 (1-203)||(39143973-39144175)
chr3 (6-157)||(50622157-50622315)
chr3 (6-140)||(14418284-14418418)
chr3 (3-129)||(19454833-19454962)
chr3 (1-103)||(33099692-33099794)
chr3 (4-110)||(8340190-8340298)
chr3 (12-121)||(25630260-25630368)
chr3 (2-63)||(48583776-48583838)
chr3 (3-139)||(49374841-49374979)
chr3 (3-138)||(2012977-2013114)
chr3 (4-127)||(10085195-10085319)
chr3 (4-127)||(10192115-10192239)
chr3 (3-139)||(26787519-26787656)
chr3 (4-66)||(46819209-46819271)
chr3 (4-127)||(6083477-6083601)
chr3 (25-139)||(33118961-33119076)
chr3 (1-127)||(35732282-35732409)
chr3 (6-139)||(43657306-43657443)
chr3 (4-139)||(5908280-5908417)
chr3 (35-139)||(49193543-49193648)
chr3 (3-55)||(7940379-7940431)
chr3 (12-115)||(9162944-9163048)
chr3 (3-95)||(46584714-46584808)
chr3 (22-127)||(30964488-30964594)
chr3 (22-127)||(30980300-30980406)
chr3 (3-139)||(27064240-27064378)
chr3 (1-39)||(38694837-38694875)
[»] chr7 (52 HSPs)
chr7 (3-222)||(42284564-42284783)
chr7 (3-222)||(43224377-43224596)
chr7 (6-222)||(33067317-33067533)
chr7 (3-222)||(43702252-43702469)
chr7 (3-222)||(3551369-3551588)
chr7 (6-185)||(9477708-9477887)
chr7 (3-222)||(16567626-16567845)
chr7 (3-222)||(16597817-16598036)
chr7 (3-222)||(46181272-46181491)
chr7 (3-222)||(10066093-10066314)
chr7 (6-222)||(35092573-35092790)
chr7 (6-222)||(39414627-39414843)
chr7 (3-206)||(5023041-5023247)
chr7 (3-222)||(31454957-31455178)
chr7 (35-222)||(3363055-3363233)
chr7 (6-186)||(46783125-46783311)
chr7 (3-222)||(19805097-19805305)
chr7 (3-140)||(30391607-30391743)
chr7 (73-222)||(27398718-27398867)
chr7 (3-140)||(30738555-30738689)
chr7 (3-140)||(17172135-17172274)
chr7 (3-129)||(40342244-40342371)
chr7 (3-121)||(48558620-48558739)
chr7 (12-206)||(38398285-38398478)
chr7 (12-206)||(38400827-38401020)
chr7 (4-120)||(2959995-2960112)
chr7 (5-140)||(44300774-44300911)
chr7 (1-140)||(40789447-40789588)
chr7 (3-140)||(28067187-28067326)
chr7 (3-129)||(1875969-1876098)
chr7 (3-107)||(5924017-5924125)
chr7 (6-140)||(25309432-25309565)
chr7 (24-156)||(27039660-27039791)
chr7 (3-139)||(12499520-12499658)
chr7 (6-140)||(21153261-21153395)
chr7 (3-95)||(16278488-16278580)
chr7 (15-104)||(11244095-11244186)
chr7 (6-127)||(9223691-9223813)
chr7 (12-58)||(43218675-43218721)
chr7 (4-107)||(26299213-26299317)
chr7 (2-62)||(43394270-43394330)
chr7 (3-139)||(38469836-38469974)
chr7 (3-63)||(16562008-16562069)
chr7 (3-63)||(16603593-16603654)
chr7 (3-107)||(33978884-33978989)
chr7 (43-139)||(34152308-34152405)
chr7 (43-139)||(34174719-34174816)
chr7 (3-63)||(36074118-36074179)
chr7 (46-114)||(4912653-4912721)
chr7 (6-113)||(9355117-9355227)
chr7 (90-202)||(43223598-43223710)
chr7 (35-127)||(48644441-48644533)
[»] chr4 (74 HSPs)
chr4 (1-222)||(34459460-34459681)
chr4 (9-222)||(2073455-2073668)
chr4 (9-222)||(1730880-1731093)
chr4 (3-222)||(33983199-33983418)
chr4 (1-222)||(22313185-22313405)
chr4 (4-219)||(28928448-28928670)
chr4 (3-222)||(21245902-21246120)
chr4 (3-222)||(29148845-29149064)
chr4 (3-222)||(42755403-42755622)
chr4 (3-222)||(41003382-41003604)
chr4 (3-222)||(2224786-2225005)
chr4 (3-222)||(25938427-25938646)
chr4 (3-222)||(3387041-3387264)
chr4 (3-222)||(42053096-42053316)
chr4 (3-222)||(54978975-54979194)
chr4 (3-222)||(52180606-52180826)
chr4 (3-222)||(52595607-52595826)
chr4 (13-222)||(8066030-8066239)
chr4 (35-222)||(652345-652532)
chr4 (3-206)||(12185841-12186038)
chr4 (3-222)||(32655351-32655570)
chr4 (3-206)||(2721083-2721281)
chr4 (3-206)||(12187833-12188031)
chr4 (35-206)||(14576881-14577052)
chr4 (35-222)||(38000690-38000877)
chr4 (6-222)||(54932574-54932786)
chr4 (3-186)||(21075892-21076072)
chr4 (6-176)||(4757194-4757365)
chr4 (3-139)||(56445072-56445211)
chr4 (6-222)||(23147466-23147686)
chr4 (35-222)||(3094806-3094991)
chr4 (6-140)||(27586495-27586629)
chr4 (3-129)||(22829800-22829927)
chr4 (3-140)||(52802174-52802313)
chr4 (3-140)||(53140673-53140812)
chr4 (12-154)||(8644128-8644270)
chr4 (3-143)||(23349300-23349445)
chr4 (3-154)||(8614608-8614759)
chr4 (3-127)||(51806854-51806979)
chr4 (119-222)||(7250423-7250526)
chr4 (3-140)||(22247922-22248062)
chr4 (3-140)||(45097624-45097764)
chr4 (4-113)||(31713571-31713682)
chr4 (5-139)||(52013849-52013985)
chr4 (3-139)||(33733439-33733576)
chr4 (1-114)||(7117871-7117983)
chr4 (3-140)||(29405782-29405921)
chr4 (1-140)||(46080778-46080920)
chr4 (3-127)||(8805849-8805974)
chr4 (3-139)||(9930500-9930638)
chr4 (3-129)||(31786476-31786604)
chr4 (35-140)||(41780740-41780846)
chr4 (3-127)||(7262074-7262199)
chr4 (3-114)||(39804332-39804444)
chr4 (6-53)||(7250519-7250566)
chr4 (4-129)||(22306724-22306850)
chr4 (25-127)||(24486647-24486750)
chr4 (164-222)||(1757859-1757917)
chr4 (3-139)||(14595362-14595500)
chr4 (6-63)||(21297273-21297331)
chr4 (3-94)||(39485090-39485183)
chr4 (29-157)||(44292891-44293016)
chr4 (164-222)||(46030428-46030485)
chr4 (164-222)||(46257974-46258031)
chr4 (3-114)||(28234109-28234221)
chr4 (11-127)||(44808532-44808648)
chr4 (23-201)||(5798326-5798503)
chr4 (4-66)||(46030318-46030380)
chr4 (3-95)||(50981909-50982003)
chr4 (3-127)||(26340154-26340279)
chr4 (3-63)||(1757968-1758028)
chr4 (25-114)||(27790988-27791079)
chr4 (3-139)||(9609030-9609169)
chr4 (173-221)||(38444115-38444164)
[»] chr8 (34 HSPs)
chr8 (3-222)||(2620797-2621016)
chr8 (3-219)||(19643353-19643569)
chr8 (3-222)||(6109675-6109894)
chr8 (12-222)||(30801309-30801519)
chr8 (3-222)||(25419320-25419528)
chr8 (3-206)||(26561082-26561283)
chr8 (4-222)||(3616706-3616919)
chr8 (3-222)||(7057658-7057880)
chr8 (3-205)||(24891283-24891473)
chr8 (3-206)||(1376238-1376444)
chr8 (3-222)||(24789565-24789785)
chr8 (3-147)||(25500199-25500332)
chr8 (112-222)||(1667328-1667438)
chr8 (4-203)||(29528043-29528242)
chr8 (11-194)||(43511253-43511435)
chr8 (5-140)||(20216262-20216399)
chr8 (5-140)||(20235860-20235997)
chr8 (7-98)||(2472241-2472332)
chr8 (1-203)||(43239233-43239435)
chr8 (3-127)||(859555-859680)
chr8 (3-127)||(222036-222162)
chr8 (3-127)||(691191-691317)
chr8 (3-127)||(735659-735785)
chr8 (2-107)||(25178910-25179015)
chr8 (89-204)||(9176934-9177048)
chr8 (6-127)||(38551621-38551743)
chr8 (17-107)||(7580121-7580213)
chr8 (35-153)||(33212342-33212462)
chr8 (3-59)||(39221561-39221618)
chr8 (3-64)||(45553120-45553181)
chr8 (3-139)||(15542187-15542326)
chr8 (25-157)||(42987652-42987784)
chr8 (3-113)||(38020101-38020213)
chr8 (3-61)||(15961668-15961727)
[»] chr6 (23 HSPs)
chr6 (7-222)||(6938105-6938320)
chr6 (1-203)||(12429481-12429683)
chr6 (36-222)||(7807848-7808034)
chr6 (3-222)||(20691419-20691639)
chr6 (1-222)||(33328646-33328867)
chr6 (1-222)||(33331658-33331879)
chr6 (6-221)||(31783815-31784033)
chr6 (6-186)||(29641330-29641513)
chr6 (3-222)||(13534018-13534242)
chr6 (6-186)||(31511509-31511691)
chr6 (3-222)||(1329391-1329612)
chr6 (3-206)||(31070856-31071057)
chr6 (6-206)||(31555804-31556000)
chr6 (3-140)||(24447036-24447175)
chr6 (3-140)||(1221625-1221764)
chr6 (22-140)||(33960065-33960185)
chr6 (6-127)||(6799364-6799486)
chr6 (3-206)||(10499227-10499432)
chr6 (3-127)||(9062071-9062196)
chr6 (4-63)||(6337294-6337353)
chr6 (3-66)||(28769938-28770001)
chr6 (4-127)||(6337860-6337985)
chr6 (164-206)||(28770049-28770091)
[»] chr2 (39 HSPs)
chr2 (3-222)||(667807-668026)
chr2 (3-222)||(4592029-4592249)
chr2 (23-214)||(15150071-15150262)
chr2 (3-222)||(29155365-29155589)
chr2 (3-222)||(13142408-13142627)
chr2 (3-222)||(32422577-32422796)
chr2 (3-222)||(33867381-33867601)
chr2 (3-222)||(30241478-30241697)
chr2 (3-222)||(9205227-9205443)
chr2 (3-222)||(38620441-38620660)
chr2 (3-222)||(25424803-25425022)
chr2 (4-222)||(20937095-20937312)
chr2 (6-206)||(44070268-44070470)
chr2 (3-222)||(31440472-31440691)
chr2 (3-222)||(23231780-23232004)
chr2 (3-222)||(4481105-4481326)
chr2 (1-136)||(12757813-12757948)
chr2 (14-222)||(38958530-38958725)
chr2 (3-206)||(16711198-16711398)
chr2 (3-140)||(4289689-4289828)
chr2 (22-140)||(10391561-10391681)
chr2 (3-129)||(29546022-29546151)
chr2 (3-140)||(2656847-2656984)
chr2 (3-115)||(18974752-18974866)
chr2 (3-98)||(3329240-3329336)
chr2 (15-87)||(17154118-17154190)
chr2 (126-222)||(17961290-17961386)
chr2 (6-117)||(15234362-15234475)
chr2 (161-222)||(3329371-3329432)
chr2 (3-127)||(35048672-35048797)
chr2 (3-127)||(42969073-42969198)
chr2 (6-113)||(12345485-12345593)
chr2 (2-63)||(8753892-8753954)
chr2 (6-127)||(11788662-11788784)
chr2 (3-139)||(39767049-39767186)
chr2 (8-139)||(8027368-8027501)
chr2 (43-139)||(15162043-15162140)
chr2 (3-61)||(35005457-35005517)
chr2 (23-114)||(41935467-41935560)
[»] scaffold0312 (1 HSPs)
scaffold0312 (3-222)||(5707-5926)
[»] scaffold0005 (2 HSPs)
scaffold0005 (35-206)||(240323-240494)
scaffold0005 (3-139)||(221878-222016)
[»] scaffold0164 (2 HSPs)
scaffold0164 (35-222)||(6948-7135)
scaffold0164 (35-222)||(14829-15016)
[»] scaffold0160 (1 HSPs)
scaffold0160 (1-129)||(26053-26183)
[»] scaffold0602 (1 HSPs)
scaffold0602 (12-154)||(5070-5212)
[»] scaffold0242 (2 HSPs)
scaffold0242 (6-140)||(13002-13137)
scaffold0242 (6-140)||(21837-21972)
[»] scaffold0056 (1 HSPs)
scaffold0056 (5-157)||(72497-72646)
[»] scaffold0249 (1 HSPs)
scaffold0249 (3-127)||(20086-20211)
[»] scaffold0011 (1 HSPs)
scaffold0011 (3-140)||(250211-250351)
[»] scaffold0230 (1 HSPs)
scaffold0230 (3-140)||(26688-26827)
[»] scaffold0024 (1 HSPs)
scaffold0024 (4-127)||(109935-110059)
[»] scaffold0938 (1 HSPs)
scaffold0938 (3-139)||(514-656)
[»] scaffold0062 (2 HSPs)
scaffold0062 (3-139)||(23796-23938)
scaffold0062 (3-139)||(33964-34106)


Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 945532 - 945751
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  945532 cattacccgcactttaattataaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaactaactcataaaataatacaaa 945631  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  945632 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacaggatggagttgttattgtattaagtagtttttttgtttag 945731  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||    
T  945732 gttttagtttaggcttaaat 945751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 25059153 - 25059372
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25059153 cattacccgcactttaactatgaaaagacattaaaaacattacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 25059252  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||     
T  25059253 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaactggatggagttgttattgtattaagtaattttttggtttat 25059352  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||    
T  25059353 gttttagtttaggcttaaat 25059372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 2978471 - 2978688
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||    
T  2978471 cattacccccactttaactatgaaaagacaataaaaacatcacaattgaaataaaact--ggtcaaaatattttaaaattaacttataaaataatacgaa 2978568  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  2978569 tcgtagtatttagtcaaattaaaaacatacaaaatatctctaaaatattgtacaccaacatgatggagttgttattgtattaagcagtttttttgtttag 2978668  T
Q  203 gttttagtttaggcttaaat 222  Q
    |||||||||||| |||||||    
T  2978669 gttttagtttagccttaaat 2978688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 2975300 - 2975083
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||    
T  2975300 cattacccccactttaactatgaaaagacaataaaaacatcacaattgaaataaaact--ggtcaaaatattttaaaattaacttataaaataatacgaa 2975203  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||  |||||    
T  2975202 tcgtagtatttagtctaattaaaaacatacaaaatatctctaaaatattgtacaccaacatgatggagttgttattgtattaagcagtttttttttttag 2975103  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||    
T  2975102 gttttagtttaggcttaaat 2975083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 3 - 219
Target Start/End: Complemental strand, 19996731 - 19996515
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||| ||    
T  19996731 cattacccgcactttgactatgaaaagacaataaaaacatcacaattgaaataaaactatgatctaaatcttttaaaattaactcataaaataatacaaa 19996632  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||| | || |||| |||||||||||||||||| |||||||||||||||    
T  19996631 tcgtagtatttagtcaaattaaaaacatccaaaatatctctaaaaaattgtacaccagcaggatgaagttgttattgtattaagcagttttttggtttag 19996532  T
Q  203 gttttagtttaggctta 219  Q
    |||||||||||||||||    
T  19996531 gttttagtttaggctta 19996515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 19506435 - 19506655
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaa-taatacga 101  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||    
T  19506435 cattacccacactttaactatgaaaagataataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaacttataaaaataatatga 19506534  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    || ||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| | || ||||||||||||||||||||||| ||||||||||||||    
T  19506535 attgtagtatttagtccaattaaaaacatttaaaatatctctaaaatattgtacaccagcaggatggagttgttattgtattaagcagttttttggttta 19506634  T
Q  202 ggttttagtttaggcttaaat 222  Q
    | |||||||||||||||||||    
T  19506635 gattttagtttaggcttaaat 19506655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 7842616 - 7842825
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| | |||||||||||||||||||||||||     
T  7842616 ctcattacccgcactttaactatgaaaagacaataaaaacatcacacttgaaataaaactatggtctaaatctcttaaaattaactcataaaataataca 7842715  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||   || |||| |||||||||||||||||  |||||||||||||    
T  7842716 aatcgtagtatttagtcaaattaaaaacatccaaaatatctctaaaaaattgtacac---caagatgaagttgttattgtattaaacagttttttggttt 7842812  T
Q  201 aggttttagttta 213  Q
    |||||||||||||    
T  7842813 aggttttagttta 7842825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 32835568 - 32835347
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  | || |||||||||||||||||||||||||| |    
T  32835568 ctcattacccgcactttaactatgaaaagacaataaaaatatcacaattgaaataaaactatggtttacatcttttaaaattaactcataaaataatatg 32835469  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    |||||| ||||||||||||||||||||||| |||||||||| | ||| ||||||| |   || ||||||||||||||||||||||| | |||| ||||||    
T  32835468 aatcgtggtatttagtcaaattaaaaacatccaaaatatctcttaaaaattgtaccccggcaagatggagttgttattgtattaagcaattttctggttt 32835369  T
Q  201 aggttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||||    
T  32835368 aggttttagtttaggcttaaat 32835347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 610762 - 610981
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| | ||| ||    
T  610762 cattacccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaattatggtccaaattttttaaaattaactcataaaagagtacaaa 610861  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggag-ttgttattgtattaagtagttttttggttta 201  Q
    ||||||||||||||||||| |||||||| |||||||||  |||   |||||||||  ||||||||||| |||||||||||| |||||||||||| |||||    
T  610862 tcgtagtatttagtcaaataaaaaacatccaaaatatccctaaccgattgtacaccgacatgatggagtttgttattgtataaagtagtttttt-gttta 610960  T
Q  202 ggttttagtttaggcttaaat 222  Q
    |||||  ||||||||||||||    
T  610961 ggtttaggtttaggcttaaat 610981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 21260800 - 21260584
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||| |||| |||| ||||||| |||||||||||||| ||||||||||||||||||    
T  21260800 tacccacactttaactatgaaaaaacaataaaaacatcacaattgaaacaaaattatgatcaaaatcttttaaaattaactaataaaataatacgaatcg 21260701  T
Q  106 tagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggtt 205  Q
    |||||||||||||||||||||| || |||||||||| ||||| ||||||||    ||  |||||||| ||| ||||||||| ||||| ||||||||| ||    
T  21260700 tagtatttagtcaaattaaaaatatccaaaatatctctaaaaaattgtacatcggcagaatggagtttttactgtattaagcagtttattggtttagatt 21260601  T
Q  206 ttagtttaggcttaaat 222  Q
    |||||||||||||||||    
T  21260600 ttagtttaggcttaaat 21260584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 28221020 - 28221238
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||  |||| ||||||| ||||||||| |||| || ||||||||||||    
T  28221020 cattacccgcactttaactatgaaaaaacaatgaaaacatcacaattgaaataaat-tatgatcaaaatcttttaaaatgaactaatgaaataatacgaa 28221118  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    | |||||||||| ||||||||||||||| |||||||||| ||||| |||||||| |  ||  |||||||||||| ||||||||| ||||| |||||||||    
T  28221119 ttgtagtatttaatcaaattaaaaacatccaaaatatctctaaaaaattgtacattggcagaatggagttgttactgtattaagcagtttattggtttag 28221218  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||    
T  28221219 gttttagtttaggcttaaat 28221238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 195
Target Start/End: Original strand, 424623 - 424815
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||  ||| ||| ||||||||||||||||||||||||||    
T  424623 cattacccacactttaactatgaaaagacaataaaaacatcacaaatgaaataaaactacggtcccaatttttaaaaattaactcataaaataatacgaa 424722  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagtttttt 195  Q
    |||||||||||||||||||  ||||||| |||||||||  ||||| ||| ||||||  | |||||||||||||||||||||||| ||||||||    
T  424723 tcgtagtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacactggcctgatggagttgttattgtattaagaagtttttt 424815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 12560668 - 12560452
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    ||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||||||    
T  12560668 tacccgcactttaactatgaaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaatcg 12560569  T
Q  106 tagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggtt 205  Q
    | ||||||||||||||  |||| || ||||||||| |||||| ||| ||||| |||||||||||||||||||||||||||| |||| ||||||||| |||    
T  12560568 tggtatttagtcaaatagaaaatatccaaaatatccttaaaaaattatacaccaacatgatggagttgttattgtattaagcagttgtttggtttaagtt 12560469  T
Q  206 ttagtttaggcttaaat 222  Q
    |   |||||||||||||    
T  12560468 tagatttaggcttaaat 12560452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 22 - 222
Target Start/End: Complemental strand, 13797108 - 13796908
Alignment:
Q  22 atgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaat 121  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||| || | ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  13797108 atgaaaagggaataaaaacatcacaattgaaataaaattatggtccaatttttttaaaattaactcataaaatagtatgaattgtagtatttagtcaaat 13797009  T
Q  122 taaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaa 221  Q
     |||||||| |||||||||  ||||| ||||||| |   || |||||||||||||||||||||| |||||||||  |||||||||  |||||||||||||    
T  13797008 aaaaaacatccaaaatatccctaaaaaattgtacgccggcaagatggagttgttattgtattaaatagtttttttatttaggtttgggtttaggcttaaa 13796909  T
Q  222 t 222  Q
    |    
T  13796908 t 13796908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 29054661 - 29054441
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaa-taaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||| ||||||| | || |||||||||||||| ||||||||||||| | |   ||| |||||||||||||||||||||||||| ||    
T  29054661 cattacccgcactttaactatgaaaaaataaataaaaacatcacaaatgaaataaaactacgatgtcaattttttaaaattaactcataaaataatatga 29054562  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    ||||| ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||   |||||||||||||||||||||||||| |||| |||||||||    
T  29054561 atcgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttggttta 29054462  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||||||||    
T  29054461 agtttaggtttaggcttaaat 29054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 44327985 - 44327768
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||| | ||  ||| ||||||||||||||||  |||||||| |||    
T  44327985 cattacccgcactttaactatgaaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactca--aaataatatgaa 44327888  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||| |||||||||||||| |||||||| |||||||||  ||||| ||| |||||   |||||||||||||||||||||||||  |||| |||||||||     
T  44327887 tcgtggtatttagtcaaataaaaaacatccaaaatatccctaaaaaattatacaccggcatgatggagttgttattgtattaaacagttgtttggtttaa 44327788  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  44327787 gtttaggtttaggcttaaat 44327768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 9222295 - 9222514
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  9222295 cattacccgcactttaactatggaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 9222394  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||||||||||||||||||||| |||||||||     
T  9222395 ccgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttgtttggtttaa 9222494  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  9222495 gtttaggtttaggcttaaat 9222514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 38491512 - 38491663
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaa 134  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||    
T  38491512 aaaaacatcacaattgaaataaaactatggtataaatcttttaaaattaactcataaaataatatgaatcgtagtatttagtaaaattaaaaacatccaa 38491611  T
Q  135 aatatctttaaaatattgtacactaacatgatggagttgttattgtattaag 186  Q
    ||||||| ||||| ||| |||||  ||| |||||||||||||||||||||||    
T  38491612 aatatctctaaaaaattatacaccgacaggatggagttgttattgtattaag 38491663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 25815382 - 25815161
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||| ||| ||| |||| |||||  |||| ||| | ||||||||||| | ||  ||| |||||||||||||||||||||||||| |    
T  25815382 cattacccgcactttaactatggaaaaacaaaaaaaaaacatcgcaaataaaataaaactacgatcccaattttttaaaattaactcataaaataatatg 25815283  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    || ||| ||||||||||||||  ||||||| | |||||| | ||||| ||| ||||| | ||||||||||||||||||||||||||||||| ||||||||    
T  25815282 aaccgtggtatttagtcaaatagaaaacatccgaaatatttctaaaaaattatacaccagcatgatggagttgttattgtattaagtagttgtttggttt 25815183  T
Q  201 aggttttagtttaggcttaaat 222  Q
    | ||||  ||||||||||||||    
T  25815182 aagtttaggtttaggcttaaat 25815161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 13312785 - 13313005
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa--acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||| ||| ||| |||| ||||  ||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |    
T  13312785 cattacccgcactttaactatggaaaaacaaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatg 13312884  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    || ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| ||||| | ||||||||||||||||||||||||||||||| |||| |||    
T  13312885 aaccgtggtatttagtcaaatagaaaacatccgaaatatgcctaaaaaattatacaccagcatgatggagttgttattgtattaagtagttgtttgtttt 13312984  T
Q  201 aggttttagtttaggcttaaa 221  Q
    | ||||  |||||||||||||    
T  13312985 aagtttaggtttaggcttaaa 13313005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 29512268 - 29512141
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| || |||    
T  29512268 cattacccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaactatggtccaatttttttaaaattaactcataaaatagtatgaa 29512169  T
Q  103 tcgtagtatttagtcaaattaaaaacat 130  Q
    | |||||||||| |||||| ||||||||    
T  29512168 ttgtagtatttaatcaaataaaaaacat 29512141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 43634566 - 43634342
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaa---aacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataat 97  Q
    |||||||||| ||||||||| ||||||| |||| |||   |||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||    
T  43634566 ctcattacccccactttaactatgaaaatacaaaaaataaaacatcacaaatgaaataaaactacgatctcaattttttaaaattaactcataaaataat 43634467  T
Q  98 acgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttgg 197  Q
    | ||||||| ||||||||| ||||  ||||||| |||||||||   |||| ||| ||||    |||||||||||||||||||||||||| |||| |||||    
T  43634466 atgaatcgtggtatttagtaaaatagaaaacatccaaaatatccccaaaaaattatacagcggcatgatggagttgttattgtattaagcagttgtttgg 43634367  T
Q  198 tttaggttttagtttaggcttaaat 222  Q
    |||| ||||  ||||||||||||||    
T  43634366 tttaagtttaggtttaggcttaaat 43634342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 222
Target Start/End: Complemental strand, 42069149 - 42068962
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaa 134  Q
    ||||| ||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||||||| ||||||| ||||||  ||||||| |||    
T  42069149 aaaaaaatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaatcgtggtatttaatcaaatagaaaacatccaa 42069050  T
Q  135 aatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    ||||||  ||||| ||| |||||   ||||||| |||||||||||||||||| |||| ||||||||| |||| |||||||||||||||    
T  42069049 aatatccctaaaaaattatacaccggcatgatgaagttgttattgtattaagcagttgtttggtttaagtttaagtttaggcttaaat 42068962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 35978565 - 35978345
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||  || |||| |||| |||| ||||||||| ||| ||||||||| | ||  ||| ||||||||||||||||||||||| || ||    
T  35978565 cattacccgcactttaaatataaaaaaacaaaaaaacacatcacaaatgatataaaactacgatctcaattttttaaaattaactcataaaatagtatga 35978466  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    ||||| |||||||||||| |  ||||||| |||||||||  ||||| ||| |||||   |||||||||||||||||||||||||| |||| |||| ||||    
T  35978465 atcgtggtatttagtcaagtagaaaacatccaaaatatccctaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttgattta 35978366  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||||||||    
T  35978365 agtttaggtttaggcttaaat 35978345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 206
Target Start/End: Original strand, 27783581 - 27783752
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaa 134  Q
    ||||| ||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||||||| ||||||||||||||  ||||||| |||    
T  27783581 aaaaatatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaatcgtggtatttagtcaaatagaaaacatccaa 27783680  T
Q  135 aatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttt 206  Q
    ||||||  ||||| ||| |||||   ||| |||||||||||||||||||||| |||| ||||||||| ||||    
T  27783681 aatatccctaaaaaattatacaccggcataatggagttgttattgtattaagcagttgtttggtttaagttt 27783752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 222
Target Start/End: Complemental strand, 48964391 - 48964204
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaa 134  Q
    ||||||||||||| ||| |||||||||   ||  ||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||  ||||||| |||    
T  48964391 aaaaacatcacaaatgagataaaactacaatcccaatttttaaaaattaactcataaaataatatgaatcgtggtatttagtcaaatagaaaacatccaa 48964292  T
Q  135 aatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    ||||||  ||||| ||| |||||   |||||||||||||||||||||||||| |||| ||||||||| ||||  ||||||||| ||||    
T  48964291 aatatccctaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttggtttaagtttaggtttaggctgaaat 48964204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 36 - 220
Target Start/End: Complemental strand, 33794420 - 33794236
Alignment:
Q  36 aaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaaa 135  Q
    |||| ||||||| ||||||||||||| | ||  ||  |||||||||||| ||||||||||||| |||| || ||||||||||||||  ||||||| ||||    
T  33794420 aaaaaatcacaaatgaaataaaactacgatctcaaatttttaaaattaattcataaaataatatgaattgtggtatttagtcaaatagaaaacatccaaa 33794321  T
Q  136 atatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaa 220  Q
    |||||  ||||| ||| || ||  ||||||||||||||||||||||||||| |||| ||||||||| ||||  ||||||||||||    
T  33794320 atatccctaaaaaattatagaccgacatgatggagttgttattgtattaagcagttgtttggtttaagtttaggtttaggcttaa 33794236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 206
Target Start/End: Original strand, 35659607 - 35659805
Alignment:
Q  8 cccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatatttt-aaaattaactcataaaataatacgaatcgt 106  Q
    ||||||| ||||| ||||||  |||||||||||||||||||||||||||||||||| || || | |||| |||||||||| || ||||| |||||| |||    
T  35659607 cccgcacgttaactatgaaat-acaataaaaacatcacaattgaaataaaactatgatccaattttttttaaaattaacttattaaatagtacgaaccgt 35659705  T
Q  107 agtatttagtcaaattaaaaacattcaaaa-tatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggtt 205  Q
    | |||||||||| |||||||  || ||||| |||   ||||| |||||||||  ||||||||||| || |||||||||||||||||||||||||||||||    
T  35659706 aatatttagtcacattaaaat-atccaaaaatattcctaaaaaattgtacaccgacatgatggagctgatattgtattaagtagttttttggtttaggtt 35659804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 3821325 - 3821171
Alignment:
Q  9 ccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgta 107  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||| || ||| | ||| | || ||| |||| |||  |||||||||||    
T  3821325 ccgcactttaactatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaaaatttcagatcaacacatacaattgtacgaatcgta 3821226  T
Q  108 gtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaaca 162  Q
    |||||||| ||||| ||||||||||||||||||  || || ||||||||| ||||    
T  3821225 gtatttagccaaataaaaaacattcaaaatatccctacaaaattgtacaccaaca 3821171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 236417 - 236556
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataa--aaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||| || ||||||||  ||||||||||| |   ||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||||| |    
T  236417 cattactcgtactttaactgtgaaaagacaaaatttaaacatcacaattgaaatagaactatggtccaaattttttaaaattaattcataaaataatatg 236516  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    ||| ||||||||||||||||| || || ||| ||||||||    
T  236517 aattgtagtatttagtcaaataaagaatatttaaaatatc 236556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 4893348 - 4893209
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||||||    
T  4893348 cattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacga 4893249  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  4893248 attgtagtatttagccaaataaaaaaacatccaaaatatc 4893209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 20415020 - 20415159
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||| || |||  | || |||| |||| |||||||| |||||    
T  20415020 cattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacga 20415119  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    |||||||||||||| |||||  |||||||| |||||||||    
T  20415120 atcgtagtatttagccaaataaaaaaacatccaaaatatc 20415159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 29185139 - 29185278
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||||||    
T  29185139 cattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacga 29185238  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  29185239 attgtagtatttagccaaataaaaaaacatccaaaatatc 29185278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 973561 - 973690
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaa--atattttaaaattaactcataaaataatacg 100  Q
    ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||| ||   | |||| ||||||||||||||| ||   |     
T  973561 cattatccgcactttaattatgaaaagacaataaaaacatcacaattgaaataaaactacggtccaattttttttttaaattaactcataaagtagatcc 973660  T
Q  101 aatcgtagtatttagtcaaattaaaaacat 130  Q
    ||| |||||||||||| |||| ||||||||    
T  973661 aatagtagtatttagtaaaataaaaaacat 973690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 31646352 - 31646230
Alignment:
Q  5 ttacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    ||||||||| |||||| |||||||||||| |||||   ||||||||||||||||||||| || ||| | ||| |||| |||||||||||||||| |||||    
T  31646352 ttacccgcattttaactatgaaaagacaacaaaaaacccacaattgaaataaaactatgatccaaaaaatttcaaatcaactcataaaataatatgaatc 31646253  T
Q  105 gtagtatttagtcaaattaaaaa 127  Q
     |||||||||  ||||| |||||    
T  31646252 atagtatttaaccaaataaaaaa 31646230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 46772539 - 46772403
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaac-atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||| |||||||||  || |||||| ||||||||  ||||||||||||||||||||||| |  || | |||| |||  ||||||||||||| ||  |    
T  46772539 cattaccagcactttaattat-aaaagataataaaaaatatcacaattgaaataaaactatgtttcaattttttttaaaacaactcataaaatagtaaaa 46772441  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatat 139  Q
    |||||||||||||||||||| |||||||||||||||||    
T  46772440 atcgtagtatttagtcaaataaaaaacattcaaaatat 46772403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 31107702 - 31107547
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||| ||||||||||  |||||| ||||||||||| ||||||||| |||||||| ||||||| |||| |||| |||| || |||||||||| ||| ||    
T  31107702 cattactcgcactttaaatatgaaa-gacaataaaaatatcacaattaaaataaaattatggtccaaattttttcaaatcaagtcataaaatagtacaaa 31107604  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacacta 159  Q
    || || ||||||| || || ||| | ||||||||||||  ||||| ||| |||||||    
T  31107603 tcttattatttagccagataaaacatattcaaaatatccctaaaaaattatacacta 31107547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 33362951 - 33362812
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaac-atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | ||||||||||||||||||  ||||||||  ||||||||||||| || |||  | || |||| |||| ||||||||||||||    
T  33362951 cattacccgcactttctctatgaaaagacaataaaaaatatcacaatataaataaaactatgatccaaaattatttaaatcaactaataaaataatacga 33362852  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  33362851 attgtagtatttagccaaataaaaaaacatccaaaatatc 33362812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 8981624 - 8981509
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa----catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataata 98  Q
    |||||||  ||||||||| ||||||||||||||||||    |||||||||||||||||||| ||| |||||  | ||| |||| ||||||||||||| ||    
T  8981624 cattacctacactttaactatgaaaagacaataaaaaaaaacatcacaattgaaataaaacaatgatcaaagaaatttcaaatcaactcataaaatagta 8981525  T
Q  99 cgaatcgtagtattta 114  Q
    ||||| ||||||||||    
T  8981524 cgaatagtagtattta 8981509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 32133519 - 32133633
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatac 99  Q
    |||||||||||||||||| ||||||||||| |||||||| || |||| |||||||||||||||| || |||| |||| |||| |||| |  ||||||||     
T  32133519 ctcattacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatat 32133618  T
Q  100 gaatcgtagtattta 114  Q
    |||||||| ||||||    
T  32133619 gaatcgtaatattta 32133633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 40044992 - 40045080
Alignment:
Q  26 aaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttag 115  Q
    ||||||||||||||||||||||||| ||||||||||||||| || | |||| |||| ||||||||||||| || ||||||||| ||||||    
T  40044992 aaagacaataaaaacatcacaattgtaataaaactatggtc-aattttttttaaatcaactcataaaatagtatgaatcgtagaatttag 40045080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10786267 - 10786331
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggt 65  Q
    ||||||||||| |||||||  |||||||||||||||||| |||||||||||||||||||||||||    
T  10786267 ctcattacccgtactttaattatgaaaagacaataaaaatatcacaattgaaataaaactatggt 10786331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16177129 - 16176997
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatac 99  Q
    |||||||  ||||||||||  || ||||||||||||||| |||||| ||||||||||||||||| || || | |||| |||| |||||||||||||  |     
T  16177129 ctcattatgcgcactttaattataaaaagacaataaaaaacatcaccattgaaataaaactatgatccaattttttttaaatcaactcataaaatagcag 16177030  T
Q  100 gaatcgtagtatttagtcaaattaaaaacattc 132  Q
     ||||||||||||||| ||||| ||||| ||||    
T  16177029 aaatcgtagtatttagccaaataaaaaatattc 16176997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 50099865 - 50100003
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||||||| |||||| |  || |||| || ||||||||||  | ||    
T  50099865 cattacctgcactttaaccgtgaaaagataataaaaaacaccacaattgaaataaaactatgatcaaaa-aaattcaaatcaattcataaaatagcatga 50099963  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    ||||||||||||||  ||||  |||||||| |||||||||    
T  50099964 atcgtagtatttaggtaaataaaaaaacatccaaaatatc 50100003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 2465599 - 2465517
Alignment:
Q  13 actttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaata 95  Q
    |||||||| |||| ||||||||||||| ||||||||| |||||||||||||||  |||| |||| |||| |||||||||||||    
T  2465599 actttaactatgagaagacaataaaaatatcacaattaaaataaaactatggttcaaattttttcaaatcaactcataaaata 2465517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 39026793 - 39026918
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| ||||| ||||| |||||||| || ||||  ||||||||||||||| || |||| |||| |||| |||| | ||||||||| ||    
T  39026793 cattacccgcactttagccatggaaagataataaaaatcaccacacatgaaataaaactatgatccaaatttttttaaatcaacttacaaaataatatga 39026892  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    |||||| ||||||  ||||| |||||    
T  39026893 atcgtaatatttaaccaaataaaaaa 39026918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 2501625 - 2501776
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||| ||||| |||  ||||||  ||||||||| |||| | || |||||||||||||||  ||| | ||| |||| ||||||||||| | ||||||    
T  2501625 cattacccacacttgaactctgaaaaatcaataaaaatatcatagttaaaataaaactatggttcaaaaaatttcaaatcaactcataaaagagtacgaa 2501724  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgta 154  Q
    ||||||||||||   |||| |||||||| ||||| ||| || ||| ||||||    
T  2501725 tcgtagtatttaacaaaataaaaaacatccaaaacatccttcaaaaattgta 2501776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 9473000 - 9473139
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattg-aaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||| ||||||||||| ||||||||||||||||| | |||||||||| |||||||| |||||||  |  ||||| |||| |||||| ||| || ||||    
T  9473000 cattactcgcactttaactatgaaaagacaataaaatatatcacaattgaaaataaaattatggtcccagaattttcaaatcaactcagaaactagtacg 9473099  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    |||| || |||||||  |||| ||||| || |||||||||    
T  9473100 aatcataatatttagctaaataaaaaaaatccaaaatatc 9473139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 45816510 - 45816644
Alignment:
Q  22 atgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaat 121  Q
    |||||||||||||||||| ||||||||| ||||||||| ||| ||  ||| |||| |||| |||||| ||||||||  |||||||| ||||||  |||||    
T  45816510 atgaaaagacaataaaaatatcacaatttaaataaaaccatgatc-caatttttttaaatcaactcaaaaaataatgtgaatcgtaatatttaaccaaat 45816608  T
Q  122 taaaaacattcaaaatatctttaaaatattgtacac 157  Q
     ||||| || ||| |||||| ||| | |||||||||    
T  45816609 aaaaaatatccaagatatctctaagaaattgtacac 45816644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 48662709 - 48662823
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatc--acaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||||||| |||||  ||||||||||||||| || | |  ||||||||||||||| |||  || ||| | ||| |||| |||||||||||||||| |    
T  48662709 cattacccgcattttaattatgaaaagacaataataaaaacccacaattgaaataaaattattatccaaaaaatttcaaatcaactcataaaataatatg 48662808  T
Q  101 aatcgtagtatttag 115  Q
    |||||||||||||||    
T  48662809 aatcgtagtatttag 48662823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 30623044 - 30622963
Alignment:
Q  13 actttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaata 95  Q
    |||||||| ||||||| |||||||||| ||||| ||||||||||| |||||||| ||| ||||| |||| |||||||||||||    
T  30623044 actttaactatgaaaa-acaataaaaatatcacgattgaaataaatctatggtccaaaaattttcaaatcaactcataaaata 30622963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 40094575 - 40094471
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacat---cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||| |||||| |||||||||||||||||| |    ||||||||||||||||||||| || ||| | ||| |||| |||| ||||||||||| |||    
T  40094575 tacccgcattttaactatgaaaagacaataaaaaaaaatccacaattgaaataaaactatgatccaaaaaatttcaaatcaacttataaaataatatgaa 40094476  T
Q  103 tcgta 107  Q
    |||||    
T  40094475 tcgta 40094471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 48985182 - 48985295
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaat--aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||||||| ||||||  ||||||||||||  ||||| ||||||||||||||||||||||  || | | | ||| |||| ||||||||||||| | ||    
T  48985182 cattacccgcattttaactgtgaaaagacaataaaaaaatatcacaattgaaataaaactataatccataaaatttcaaatcaactcataaaatagtccg 48985281  T
Q  101 aatcgtagtattta 114  Q
    ||| ||||||||||    
T  48985282 aatggtagtattta 48985295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 22580090 - 22580017
Alignment:
Q  41 atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtattta 114  Q
    |||||||||||||||||||||||||  ||| | ||| |||| ||||||||| ||| ||||||||||||||||||    
T  22580090 atcacaattgaaataaaactatggttcaaaaaatttcaaatcaactcataatatagtacgaatcgtagtattta 22580017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 35739063 - 35738942
Alignment:
Q  7 acccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    |||||||||||| ||||| ||||| |||||||| || |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| ||||||    
T  35739063 acccgcactttagccatggaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatgaatcg 35738964  T
Q  106 tagtatttagtcaaattaaaaa 127  Q
    || ||||||  ||||| |||||    
T  35738963 taatatttaaccaaataaaaaa 35738942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 32888378 - 32888457
Alignment:
Q  77 aaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtaca 156  Q
    ||||| || |||||||||| ||||||| ||||||||||| ||||| |||||||| ||||||||| ||| || ||||||||    
T  32888378 aaaatcaattcataaaatagtacgaattgtagtatttaggcaaataaaaaacatccaaaatatccttagaaaattgtaca 32888457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 35949656 - 35949530
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||||||| ||||||  |||||||||||||||||  || ||||| ||||||| ||||||| || | | | ||| |||| ||||||||||||| || |    
T  35949656 cattacccgcagtttaactctgaaaagacaataaaaaagcaccacaactgaaatacaactatgatccagaaaatttcaaatcaactcataaaatagtatg 35949557  T
Q  101 aatcgtagtatttagtcaaattaaaaa 127  Q
    ||| ||||||||||  ||||| |||||    
T  35949556 aatggtagtatttaaccaaataaaaaa 35949530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 48796589 - 48796715
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||||||| ||||||  |||||||||||||||||  || ||||| ||||||| ||||||| || | | | ||| |||| ||||||||||||| || |    
T  48796589 cattacccgcagtttaactctgaaaagacaataaaaaagcaccacaactgaaatacaactatgatccagaaaatttcaaatcaactcataaaatagtatg 48796688  T
Q  101 aatcgtagtatttagtcaaattaaaaa 127  Q
    ||| ||||||||||  ||||| |||||    
T  48796689 aatggtagtatttaaccaaataaaaaa 48796715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 2433425 - 2433483
Alignment:
Q  164 gatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    |||| |||||||||||||||||||||||||||  ||||||||| | |||||||||||||    
T  2433425 gatgaagttgttattgtattaagtagtttttttatttaggtttgaatttaggcttaaat 2433483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 7121053 - 7121187
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| ||||  ||||| |||||||| || |||| ||||||||||||| || || |||| |||| |||| |||| |  |||||||| ||    
T  7121053 cattacccgcactttagccatagaaagataataaaaatcaccacacttgaaataaaactgtgatccaaatttttttaaatcaacttacgaaataatatga 7121152  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaa 135  Q
    |||||| ||||||  |||||  |||||||||||||    
T  7121153 atcgtaatatttaaccaaataaaaaaacattcaaa 7121187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 47662327 - 47662388
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatg 63  Q
    |||||||||||||||| ||||||||||| |||||||| || |||| ||||||||||||||||    
T  47662327 cattacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataaaactatg 47662388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 31873355 - 31873297
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatg 63  Q
    ||||| ||||||||  || ||||||||||||||| ||||||||||||||||||||||||    
T  31873355 tacccacactttaattataaaaagacaataaaaaacatcacaattgaaataaaactatg 31873297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 28192549 - 28192424
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||||||| |||| ||||| ||||| |||||||| || |||| |||||||||||||||| || || | |||| |||| |||| |  |||||||| ||    
T  28192549 cattacccgcattttagccatggaaagataataaaaatcaccacacttgaaataaaactatgatccaattttttttaaatcaacttacgaaataatatga 28192450  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    ||| || ||||||  ||||| |||||    
T  28192449 atcataatatttaaccaaataaaaaa 28192424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 30489718 - 30489779
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatg 63  Q
    |||||||||||||||||  || ||||| ||||||||| ||||| ||||||||||||||||||    
T  30489718 cattacccgcactttaattataaaaagtcaataaaaaacatcataattgaaataaaactatg 30489779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 2433314 - 2433377
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtc 66  Q
    |||||||| ||||| | | |||||||   ||| |||||||||||||||||||||||||||||||    
T  2433314 cattacccacacttaagctatgaaaaaggaatgaaaacatcacaattgaaataaaactatggtc 2433377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 29426369 - 29426242
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa---catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatac 99  Q
    |||||||| || ||||||  |||||||| ||||||||   || |||| |||||||| ||||||| || | | | ||| |||| ||||||||||||||||     
T  29426369 cattacccacagtttaactctgaaaagataataaaaaaagcaccacagttgaaatacaactatgatccagaaaatttcaaatcaactcataaaataatat 29426270  T
Q  100 gaatcgtagtatttagtcaaattaaaaa 127  Q
    |||| |||||| |||  ||||| |||||    
T  29426269 gaatggtagtacttaaccaaataaaaaa 29426242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 2e-95; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 6224897 - 6224681
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6224897 tacccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaattg 6224798  T
Q  106 tagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggtt 205  Q
    |||||||||||| |||||||||||| |||||||||| ||||||||||||||| | || |||||||||||||||||||||||  |||||||||||||||||    
T  6224797 tagtatttagtccaattaaaaacatccaaaatatctctaaaatattgtacaccagcaggatggagttgttattgtattaagctgttttttggtttaggtt 6224698  T
Q  206 ttagtttaggcttaaat 222  Q
    |||||||||||||||||    
T  6224697 ttagtttaggcttaaat 6224681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 29455844 - 29456063
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  29455844 cattacccacactttaactatgaaaagataataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaacttataaaataatatgaa 29455943  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    | ||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| | || ||||||||||||||||||||||| |||||||||||||||    
T  29455944 ttgtagtatttagtccaattaaaaacatttaaaatatctctaaaatattgtacaccagcaggatggagttgttattgtattaagcagttttttggtttag 29456043  T
Q  203 gttttagtttaggcttaaat 222  Q
     |||||||||||||||||||    
T  29456044 attttagtttaggcttaaat 29456063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 31149749 - 31149530
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  31149749 cattatccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatctcttaaaattaactcataaaataatacgaa 31149650  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    ||||| |||||||||||||||||||||| ||||||| |  ||||| ||| ||||| || | ||||||||||||||||||||||| |||||||||||||||    
T  31149649 tcgtaatatttagtcaaattaaaaacatccaaaatagcactaaaaaattatacaccaataggatggagttgttattgtattaagcagttttttggtttag 31149550  T
Q  203 gttttagtttaggcttaaat 222  Q
    |||||||||| |||||||||    
T  31149549 gttttagttttggcttaaat 31149530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 22632301 - 22632082
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||| |||| ||||||||||||| ||||||||||||||    
T  22632301 ctcattacccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaatt--ggtctaaatcttttaaaattaacccataaaataatacg 22632204  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    |||| |||||||||||||||||||||||||  ||||||||| |||||  |||||||| | || ||||||||||||||||||||||  |||| ||| ||||    
T  22632203 aatcatagtatttagtcaaattaaaaacatcaaaaatatctctaaaaagttgtacaccagcaggatggagttgttattgtattaaacagttcttttgttt 22632104  T
Q  201 aggttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||||    
T  22632103 aggttttagtttaggcttaaat 22632082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 14087716 - 14087935
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||||    
T  14087716 cattatccgcactttaactatgaaaaaacaataaaaacatcacaattgaaataaaattatgatcaaaatcttttaaaattaactaataaaataatacgaa 14087815  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    ||||| |||||||||||||||||||||| |||||||||| ||||| |||||||||    |  |||||||||||| ||||||||| ||||| |||||||||    
T  14087816 tcgtaatatttagtcaaattaaaaacatccaaaatatctctaaaaaattgtacaccggtagaatggagttgttactgtattaagcagtttattggtttag 14087915  T
Q  203 gttttagtttaggcttaaat 222  Q
    |||||||||||| |||||||    
T  14087916 gttttagtttagacttaaat 14087935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 18595414 - 18595633
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||| |||||||||||| || |||| |||||||||| |||||||||||||||||| ||||||| | || |||||||||||||||||||||||||| |||    
T  18595414 cattatccgcactttaactataaaaaaacaataaaaatatcacaattgaaataaaattatggtctacatcttttaaaattaactcataaaataatatgaa 18595513  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||||||||||||||||||| |||||||||| | ||| |||||||||   || ||||||||||||||||||||||  | |||| ||||||||    
T  18595514 tcgtagtatttagtcaaattaaaaacatccaaaatatctcttaaaaattgtacaccgccaagatggagttgttattgtattaaacaattttctggtttag 18595613  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||    
T  18595614 gttttagtttaggcttaaat 18595633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 3 - 193
Target Start/End: Original strand, 41983301 - 41983491
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||  |||||||||||| |||    
T  41983301 cattacccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaactatggtctaaatcttttaaaattaaaccataaaataatatgaa 41983400  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagtttt 193  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||   || ||||| ||||||||||||||||| ||||||    
T  41983401 tcgtagtatttagtcaaattaaaaacatccaaaatatctctaaaaaattgtacacaggcaggatggggttgttattgtattaagcagtttt 41983491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 7978084 - 7978304
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||| | ||||||||| |||    
T  7978084 cattacccgcactttaactatgaaaaaacaataaaaacatcacaattgaaataaaattatgatcaaaatcttttaaaattaactaaaaaaataatatgaa 7978183  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatct-ttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    |  |||||||||||||||||||||||||||||||||||| | |||| |||| ||||   ||  |||||||||||| ||||||||| ||||| ||||||||    
T  7978184 taatagtatttagtcaaattaaaaacattcaaaatatctctaaaaaaattgcacaccggcagaatggagttgttactgtattaagcagtttattggttta 7978283  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||||||||||||||||||    
T  7978284 agttttagtttaggcttaaat 7978304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 14088321 - 14088540
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||| ||||||||||||| |||    
T  14088321 cattacccgcactttaactatgaaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaattcataaaataatatgaa 14088420  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    | || ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||   |||||||||||||||||||||||||| |||| |||||||||     
T  14088421 ttgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttggtttaa 14088520  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  || |||||||||||    
T  14088521 gtttaggtctaggcttaaat 14088540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 1061001 - 1061225
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||| ||||||||||| ||||||| |||| |||| ||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||    
T  1061001 cattacacgcactttaactatgaaaaaacaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatga 1061100  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaa----catgatggagttgttattgtattaagtagttttttgg 197  Q
    ||||| ||||||||||||||  |||||||||||||||||  ||||| ||| ||||| ||    |||||| ||||||||||||||||||| |||| |||||    
T  1061101 atcgtggtatttagtcaaatagaaaacattcaaaatatccctaaaaaattatacaccaacaggcatgatagagttgttattgtattaagcagttgtttgg 1061200  T
Q  198 tttaggttttagtttaggcttaaat 222  Q
    |||| ||||  ||||| ||||||||    
T  1061201 tttaagtttaggtttaagcttaaat 1061225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 182
Target Start/End: Original strand, 4572321 - 4572500
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||| ||||||||||||| | ||  ||  ||||||||||||||||||||| ||||||||    
T  4572321 cattatccgcactttaactatgaaaagacaaaaaaaacatcacaaatgaaataaaactacgatcccaaatttttaaaattaactcataaaaaaatacgaa 4572420  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtat 182  Q
    |||||||||||||||||||  ||||||| |||||||||  ||||||||| |||||   |||||||||||| |||||||||    
T  4572421 tcgtagtatttagtcaaatagaaaacatccaaaatatccctaaaatattatacacctgcatgatggagttattattgtat 4572500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 15719246 - 15719027
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaata---ttttaaaattaactcataaaataatacgaa 102  Q
    ||||||||||||||| |||||||  ||| ||||||||||||| ||||||||||||| | ||  |||    |||||||||||||||||||||||||| |||    
T  15719246 tacccgcactttaactatgaaaaaccaaaaaaaacatcacaaatgaaataaaactacgatcccaattattttttaaaattaactcataaaataatatgaa 15719147  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||| ||||||||||||||||||||||| |||||||||     
T  15719146 tcgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatgaagttgttattgtattaagtagttgtttggtttaa 15719047  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  15719046 gtttaggtttaggcttaaat 15719027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 14645368 - 14645588
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||| ||| ||| |||| |||| ||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||| | ||    
T  14645368 cattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataaaactacgatctcaattttttaaaattaactcataaaataacatga 14645467  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    | |||  |||||||||||||  ||||||| | ||||||   ||||| ||| |||||   |||||||||||||||||||||||||| |||| |||||||||    
T  14645468 accgtgatatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttggttta 14645567  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||| ||||    
T  14645568 agtttaggtttaggctcaaat 14645588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 41616637 - 41616856
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa---catcacaattgaaataaaactatggtcaaaatatttta--aaattaactcataaaataat 97  Q
    |||||||||||||||||| ||||||| ||||||||||   |||||||| ||||||||||||| | ||  | | ||||   |||||||||||| |||||||    
T  41616637 cattacccgcactttaactatgaaaa-acaataaaaaaaacatcacaaatgaaataaaactacgatcccattttttttttaaattaactcattaaataat 41616735  T
Q  98 acgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttgg 197  Q
    ||||||||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   |||||||||||||||||||||||||| ||    ||||    
T  41616736 acgaatcgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagcag----ttgg 41616831  T
Q  198 tttaggttttagtttaggcttaaat 222  Q
    |||| ||||  ||||||||||||||    
T  41616832 tttaagtttaggtttaggcttaaat 41616856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 36323077 - 36323205
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    ||||| ||||||||||| |||||  ||||||||||||||||| |||| ||||||||||||||| |||  |||| |||| ||||||| |||||||| ||||    
T  36323077 attactcgcactttaactatgaag-gacaataaaaacatcacgattggaataaaactatggtccaaaatttttcaaatcaactcatcaaataatatgaat 36323175  T
Q  104 cgtagtatttagtcaaattaaaaacattca 133  Q
    |||||||||||| ||||| |||||||||||    
T  36323176 cgtagtatttagccaaataaaaaacattca 36323205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 3049820 - 3049685
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatg-gtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    |||| |||||||| ||||||||||| |||||||| || |||||||||||||||||||||  ||||| | ||||||||| |||||| ||||||||| ||||    
T  3049820 tacctgcactttagccatgaaaagataataaaaaacaccacaattgaaataaaactatgattcaaatttttttaaaatcaactcacaaaataatatgaat 3049721  T
Q  104 cgtagtatttagtcaaattaaaaacattcaaaatat 139  Q
    |||| ||||||| ||||| |||||||| ||||||||    
T  3049720 cgtaatatttagacaaataaaaaacatccaaaatat 3049685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 34718838 - 34718699
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||||||    
T  34718838 cattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacga 34718739  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  34718738 attgtagtatttagccaaataaaaaaacatccaaaatatc 34718699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 41692522 - 41692383
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||||||    
T  41692522 cattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacga 41692423  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  41692422 attgtagtatttagccaaataaaaaaacatccaaaatatc 41692383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 24489127 - 24489035
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaata 95  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||  ||| ||||| |||| |||||||||||||    
T  24489127 cattacccacactttaactatgaaaagacaataaaaatatcacaattgaaataaaactatggttcaaaaattttcaaatcaactcataaaata 24489035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 6311041 - 6311190
Alignment:
Q  11 gcactttaaccatgaaaagacaataaaa---acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgta 107  Q
    |||||||||| |||||||||||||||||   |||||||||||||||||||| |||| || || | |||| |||| ||||||||||||| ||||||| |||    
T  6311041 gcactttaactatgaaaagacaataaaaaaaacatcacaattgaaataaaaatatgatctaattttttttaaatcaactcataaaatagtacgaattgta 6311140  T
Q  108 gtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacac 157  Q
    |||||||| ||||| ||||  || |||||||||  | ||| |||||||||    
T  6311141 gtatttagccaaataaaaattatccaaaatatcccttaaaaattgtacac 6311190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 639415 - 639278
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||||||| ||||||||||||||| |||||||| || |||||||||||||||| |||| || ||| | ||| |||| |||| |||||||| ||  ||    
T  639415 attacccgcacattaaccatgaaaagaaaataaaaaacaccacaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataaa 639316  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    ||||||||||||| ||||| ||||||||  ||||||||    
T  639315 tcgtagtatttagccaaataaaaaacatcaaaaatatc 639278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 19254542 - 19254417
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||| || |||  | || |||| |||| |||||||| || ||    
T  19254542 cattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtatga 19254443  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    |||||||||||||| ||||| |||||    
T  19254442 atcgtagtatttagccaaataaaaaa 19254417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 23141677 - 23141478
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatgg-tcaaaatattttaaaattaactcataaaataatac-ga 101  Q
    |||||||||| |||||| |||||||||||||||||| |||||||||||||||||| | ||| ||| ||| |||| ||||  |||||||||| | |||  |    
T  23141677 attacccgcattttaactatgaaaagacaataaaaatatcacaattgaaataaaattgtggttcacaat-ttttcaaatcgactcataaaaaagtacaaa 23141579  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    |||||||||||||  |||| ||||||||| ||||| ||| || ||| |||||| || ||||| | ||| | ||||||||| |||||| ||||| ||||||    
T  23141578 atcgtagtattta-acaaaataaaaacatccaaaacatccttcaaaaattgtataccaacataagggattagttattgtactaagtaatttttaggttta 23141480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 19549403 - 19549543
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaa-taaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||| ||||||||||||||||| | || |||||||||| |||||||||||||  || ||||| |||| ||||||||||||| ||||    
T  19549403 cattacccgcactttaactatgaaaagacaataaaatatattacaattgaaaataaaactatggtctcaaaattttcaaatcaactcataaaatagtacg 19549502  T
Q  101 aatcgtagtatttagtcaaattaaa-aacattcaaaatatc 140  Q
    |||| || |||||||  |||| ||| ||||| |||||||||    
T  19549503 aatcataatatttagctaaataaaataacatccaaaatatc 19549543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 6277867 - 6277728
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaata-aaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||||||||||||| ||||||| |||||||||||||||||||| || |||  | || |||| | || |||||||| |||||    
T  6277867 cattacccgcactttctctatgaaaagacaatataaaacattacaattgaaataaaactatgatccaaaattatttaaatcatctaataaaatagtacga 6277768  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    |||||| ||||||| |||||  ||||||||||||||||||    
T  6277767 atcgtaatatttagccaaataaaaaaacattcaaaatatc 6277728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 25694725 - 25694596
Alignment:
Q  8 cccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgt 106  Q
    ||||||||||  | |||||||||||||||||| ||||||||||||||||||| | || || |||  | || |||| |||| |||||||| ||||||||||    
T  25694725 cccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaattgtgatctaaaattatttaaatcaactaataaaatagtacgaatcgt 25694626  T
Q  107 agtatttagtcaaattaaaaacattcaaaa 136  Q
    ||||||||| ||||| |||||||| |||||    
T  25694625 agtatttagccaaataaaaaacatccaaaa 25694596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 35853575 - 35853700
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| ||||||||||| |||||||| || |||| |||||||||||||||| || |||| ||||||||| |||| |  |||||||| ||    
T  35853575 cattacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataaaactatgatccaaattttttaaaatcaacttacgaaataatatga 35853674  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    |||||| ||||||  ||||| |||||    
T  35853675 atcgtaatatttaaccaaataaaaaa 35853700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 16186821 - 16186960
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaat-aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||||||||||||||| |||||||||||| ||||||| || ||||||||||||| |||| || ||| | ||| |||| |||| |||||||| ||  |    
T  16186821 cattacccgcactttaaccgtgaaaagacaataaaaaacaccataattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataa 16186920  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    |||||||||||||  |||||  |||||||| |||||||||    
T  16186921 atcgtagtatttaaccaaataaaaaaacatccaaaatatc 16186960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 16620368 - 16620250
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||| || ||||||| | |||||||||||||||||| |||||||||||||||||||||||| || ||| | ||| |||| ||||  ||||||| |||||    
T  16620368 cattatccacactttagcaatgaaaagacaataaaaagcatcacaattgaaataaaactatgatccaaaaaattttaaatcaactagtaaaatagtacga 16620269  T
Q  102 atcgtagtatttagtcaaa 120  Q
    ||| | |||||||| ||||    
T  16620268 atcatcgtatttagccaaa 16620250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 32302442 - 32302576
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| ||||| ||||| |||||||| || |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| ||    
T  32302442 cattacccgcactttagccatggaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatga 32302541  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaa 135  Q
    |||||| ||||||  |||||  |||||||||||||    
T  32302542 atcgtaatatttaaccaaataaaaaaacattcaaa 32302576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 38309829 - 38309954
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||| |||||||||  | |||||||||||| |||| ||||||||||||||||||||||||| ||  ||  | || |||| |||| |||||||| |||||    
T  38309829 cattatccgcactttctctatgaaaagacaacaaaaaacatcacaattgaaataaaactatgatccgaaattatttaaatcaactaataaaatagtacga 38309928  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    |||||| ||||||| ||||| |||||    
T  38309929 atcgtaatatttagccaaataaaaaa 38309954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 203
Target Start/End: Original strand, 30867 - 31029
Alignment:
Q  41 atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    ||||||||| |||||||| ||||||  |||| |||| |||| ||||||||||| | ||||||||||||||||||   |||| |||||||| ||||| |||    
T  30867 atcacaattaaaataaaattatggttcaaattttttcaaatcaactcataaaagagtacgaatcgtagtatttaccaaaataaaaaacatccaaaacatc 30966  T
Q  141 tttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttagg 203  Q
     || | ||||||||  | | ||||| |||     |||||||| ||||||||||| ||||||||    
T  30967 cttcagatattgtattccagcatgagggatcacatattgtatcaagtagtttttaggtttagg 31029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 5657775 - 5657662
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||| |||||||||||  || |||||||||||||||  |||||| ||||||||||||||||| || || | |||| |||  ||||||||||||| ||      
T  5657775 cattatccgcactttaattataaaaagacaataaaaaaacatcactattgaaataaaactatgatccaattttttttaaagcaactcataaaatagtaga 5657676  T
Q  101 aatcgtagtattta 114  Q
    ||||||||||||||    
T  5657675 aatcgtagtattta 5657662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 36470394 - 36470336
Alignment:
Q  164 gatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    |||| |||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  36470394 gatgaagttgttattgtattaagtagtttttttatttaggtttgagtttaggcttaaat 36470336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 4901984 - 4901892
Alignment:
Q  17 taaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgta 107  Q
    |||| ||||||||||||||||||  ||||||||||||||||||| |||| || ||| | ||| |||| ||||||||||||| || ||||||||    
T  4901984 taactatgaaaagacaataaaaaagcatcacaattgaaataaaaatatgatccaaaaaatttcaaatcaactcataaaatagtatgaatcgta 4901892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 36470505 - 36470442
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtc 66  Q
    ||||||| |||||||| | |||||||   |||||||||||||||||||||||||||||||||||    
T  36470505 cattaccagcactttagctatgaaaaaggaataaaaacatcacaattgaaataaaactatggtc 36470442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 30774863 - 30774985
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    ||||||||||||| ||||| ||| | |||||||| || |||| |||||||||||||||| || || | |||| |||| |||| |  |||||||| |||||    
T  30774863 tacccgcactttagccatggaaaaataataaaaatcaccacacttgaaataaaactatgatccaattttttttaaatcaacttacgaaataatatgaatc 30774962  T
Q  105 gtagtatttagtcaaattaaaaa 127  Q
    ||| ||||||  ||||| |||||    
T  30774963 gtaatatttaaccaaataaaaaa 30774985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 35935359 - 35935485
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||| || ||||||  |||||||||||||||||  || ||||| ||||||| ||||||| || | | | ||| |||| ||||||||||| |||| |    
T  35935359 cattacccacagtttaactctgaaaagacaataaaaaagcaccacaactgaaatacaactatgatccagaaaatttcaaatcaactcataaaagaatatg 35935458  T
Q  101 aatcgtagtatttagtcaaattaaaaa 127  Q
    ||| ||| ||||||  ||||| |||||    
T  35935459 aatggtactatttaaccaaataaaaaa 35935485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 2e-95; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 11671785 - 11671997
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11671785 cattacccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaa-tattttaaaattaactcataaaataatacgaa 11671883  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||||||||||||||||||||||||||||    
T  11671884 tcatagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgt------acaggatggagttgttattgtattaagtagttttttggtttag 11671977  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||    
T  11671978 gttttagtttaggcttaaat 11671997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 25 - 222
Target Start/End: Complemental strand, 23298365 - 23298168
Alignment:
Q  25 aaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23298365 aaaagacaataaaaacatcacaattgaaataaaactatggtcaaattattttaaaattaactcataaaataatacgaatcgtagtatttagtccaattaa 23298266  T
Q  125 aaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    |||||| |||||||||| ||||||||||||||| | || |||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  23298265 aaacatccaaaatatctctaaaatattgtacaccagcaggatgtagttgttattgtattaagctgttttttggtttaggttttagtttaggcttaaat 23298168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 222
Target Start/End: Original strand, 39952573 - 39952779
Alignment:
Q  16 ttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttag 115  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||  ||| ||||||||||     
T  39952573 ttaactatgaaaagacagtaaaaacatcacaattgaaataaaactatggtctaaatcttttaaaattaactcataaaataatataaattgtagtatttaa 39952672  T
Q  116 tcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttagg 215  Q
    |||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39952673 tcaaattaaaaacattcaaaatatctctaaaaaattgtacaccgacatgatggagttgttattgtattaagcagttttttggtttaggttttagtttagg 39952772  T
Q  216 cttaaat 222  Q
    |||||||    
T  39952773 cttaaat 39952779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 5041113 - 5040894
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  5041113 cattatccgcactttaactatgaaaagataataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaacttataaaataatatgaa 5041014  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    | ||  ||||||||| ||||||||||||||||||||| | ||||||||||||||| | || ||| ||||||||||||||||||| || ||||||||||||    
T  5041013 ttgtgatatttagtccaattaaaaacattcaaaatatatctaaaatattgtacaccagcaagatagagttgttattgtattaagcaggtttttggtttag 5040914  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||    
T  5040913 gttttagtttaggcttaaat 5040894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 12905663 - 12905882
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||| ||||||||||| |||||| ||||| ||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| |||    
T  12905663 cattactcgcactttaactatgaaatgacaacaaaaatatcacaattgaaataaaactatggtctacatcttttaaaattaactcataaaataatatgaa 12905762  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||||| | |||| | ||||||    
T  12905763 tcgtattatttagtcaaattaaaaacattcaaaatatctcttaaaaattgtacactagcaagatggagttgttattgtattaagcaattttctagtttag 12905862  T
Q  203 gttttagtttaggcttaaat 222  Q
     |||||||||||||||||||    
T  12905863 attttagtttaggcttaaat 12905882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 4 - 222
Target Start/End: Original strand, 40563992 - 40564210
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  40563992 attacccgcactttaacaatgaaaagaaaataaaaacatcacaattgaaataaaactatggtctaaatattttaaaattaactcatcaaataatacgaat 40564091  T
Q  104 cgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttagg 203  Q
    ||||| ||||||||||||||||||||| |||||||||| | ||| |||||||||   ||  |||||||||||||||||||||  | |||| | |||||||    
T  40564092 cgtagcatttagtcaaattaaaaacatccaaaatatctcttaaaaattgtacaccggcagaatggagttgttattgtattaaacaattttctagtttagg 40564191  T
Q  204 ttttagtttaggcttaaat 222  Q
    ||||||||||| |||||||    
T  40564192 ttttagtttagacttaaat 40564210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 48080108 - 48080321
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| |    
T  48080108 ctcattacccgcactttaactatgaaaagacaataaaaatatcacaattgaaataaaactatggtctacatcttttaaaattaactcataaaataatatg 48080207  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    |||||||||||||||||||||||||||||| |||||||||| | ||| |||||||||         |||||||||||||||||||| | |||| ||||||    
T  48080208 aatcgtagtatttagtcaaattaaaaacatccaaaatatctcttaaaaattgtacac--------cggagttgttattgtattaagcaattttctggttt 48080299  T
Q  201 aggttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||||    
T  48080300 aggttttagtttaggcttaaat 48080321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 25467552 - 25467757
Alignment:
Q  17 taaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagt 116  Q
    |||| ||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  25467552 taactatgaaaaaacaataaaaacatcacaattgaaataaaattatgatcaaaatcttttaaaattaactaataaaataatacgaatcgtagtatttagt 25467651  T
Q  117 caaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggc 216  Q
     ||||||||||||| |||||||||| ||||| |||||||||   ||  |||||||||||| ||| ||||| ||||| |||||||||||||||||||||||    
T  25467652 aaaattaaaaacatccaaaatatctctaaaaaattgtacaccggcagaatggagttgttactgttttaagcagtttattggtttaggttttagtttaggc 25467751  T
Q  217 ttaaat 222  Q
    ||||||    
T  25467752 ttaaat 25467757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 22845183 - 22844986
Alignment:
Q  9 ccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtag 108  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| |||||||||||||||||||||||||| ||||    
T  22845183 ccgcattttaactatgaaaagacaataaaaacatcacatttgaaataaaactatggtccaaatttttttaaattaactcataaaataatacgaattgtag 22845084  T
Q  109 tatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttt 206  Q
    ||||||||||||| |||||||| |||||||||  ||||| |||||||||   || ||||||| ||||| |||||||||||||||||| ||||||||||    
T  22845083 tatttagtcaaataaaaaacatccaaaatatccctaaaaaattgtacaccggcaggatggagctgttactgtattaagtagtttttttgtttaggttt 22844986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 50508928 - 50508712
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| |||||||| |||||||||||| |||| |    
T  50508928 tacccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaattatggtctaaatctttttaaattaacgcataaaataatatgaattg 50508829  T
Q  106 tagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggtt 205  Q
    ||||||||| |||||| |||||||| |||||||||| | ||| |||||||||   || ||| |||||||||||  |||||| | |||| |||||||||||    
T  50508828 tagtatttaatcaaatgaaaaacatccaaaatatctcttaaaaattgtacaccggcaggattgagttgttattaaattaagcaattttctggtttaggtt 50508729  T
Q  206 ttagtttaggcttaaat 222  Q
    |||||||||||||||||    
T  50508728 ttagtttaggcttaaat 50508712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 19873141 - 19873275
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||    
T  19873141 cattacctgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaactatggtctaaatcttttaaaattaactcataaaataatatgaa 19873240  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaat 137  Q
    ||||||||| |||||||||||||||||| ||||||    
T  19873241 tcgtagtatatagtcaaattaaaaacatccaaaat 19873275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 2150738 - 2150540
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||| ||||||    
T  2150738 cattactcgcactttaattatgaaaagacaataaaaacatcacaattgaaataaaactatggtctaaatattttcaaatcaactcataaaatagtacgaa 2150639  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    ||||||||||| | |||||  ||||||| ||||||||   |||||||| |||||| |  | ||  |||| |||| ||||||||||||||||| |||||||    
T  2150638 tcgtagtatttggccaaat--aaaacatccaaaatattcctaaaatatggtacaccagtaggagcgagtggttactgtattaagtagtttttaggtttag 2150541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 24987466 - 24987247
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  24987466 cattacccgcactttaactatggaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 24987367  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     ||| |||||| |||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||||||||||||||||||||  |||||||||     
T  24987366 ccgtggtatttggtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagtagtagtttggtttaa 24987267  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  24987266 gtttaggtttaggcttaaat 24987247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 39352509 - 39352727
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| | || ||||| ||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  39352509 cattacccgcactttaactatgaaaaaaaaaaaaaaa-atcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 39352607  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||| ||||||||||||||  |||| ||  ||||||||  ||||| ||| |||||   |||||||||||||||||||||||||| |||| |||||||||     
T  39352608 tcgtggtatttagtcaaatagaaaatatctaaaatatccctaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttggtttaa 39352707  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  39352708 gtttaggtttaggcttaaat 39352727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 186
Target Start/End: Original strand, 19618733 - 19618916
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| |||| || |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  19618733 cattacccgcactttaactatgataaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 19618832  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaag 186  Q
    || |  |||||||||||||  ||||||| |||||||||  ||||| ||| |||||  |||||||||||||||||||||||||||    
T  19618833 tcttgatatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccgacatgatggagttgttattgtattaag 19618916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 49360010 - 49360222
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| |||||||       |||| |||| || ||||||||||||| | ||  ||| |||||||||||||||||||||||| | |||    
T  49360010 cattacccgcactttaactatgaaaa-------aaaatatcataaatgaaataaaactacgatcccaattttttaaaattaactcataaaataacatgaa 49360102  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||| ||||||||||||||  |||||||||||||||||| ||||| ||| |||||   |||||||||||||||||||||||||| |||| |||||||||     
T  49360103 tcgtggtatttagtcaaatagaaaacattcaaaatatctctaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttggtttaa 49360202  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||| ||||    
T  49360203 gtttaggtttaggctgaaat 49360222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 6408622 - 6408842
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||| ||||||| |||| |||| ||||||||| ||||||||||||| | ||  ||| |||||||||||||| ||||||||||| ||    
T  6408622 cattacccgcactttaactatgaaaaaacaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactaataaaataatatga 6408721  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    |||||  |||||||||||||  ||||||| |||||||||  ||||| ||| |||||   |||||||||||| ||||||||||||| |||| |||| ||||    
T  6408722 atcgtgatatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcatgatggagttattattgtattaagcagttgtttgattta 6408821  T
Q  202 ggttttagtttaggcttaaat 222  Q
      |||  ||||||||||||||    
T  6408822 aatttaggtttaggcttaaat 6408842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 50481124 - 50480926
Alignment:
Q  2 tcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||||||||||||||| |||||||      ||||| ||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||    
T  50481124 tcattacccgcactttaactatgaaaa------aaaaatatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatga 50481031  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    ||||| ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||   ||| |||||||||||||||||||||| |||| |||||||||    
T  50481030 atcgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcataatggagttgttattgtattaagcagttgtttggttta 50480931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 33558846 - 33558750
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  33558846 tacccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaactatgattaaaatattttaaaattaactcataaaataatacgaa 33558750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 41924017 - 41924237
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||| ||| ||| |||| |||| ||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||| |  |    
T  41924017 cattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataaaactacgatctcaattttttaaaattaactcataaaataacataa 41924116  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    | ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   |||||||||||||||||||||||||| |||| |||||||||    
T  41924117 accgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttggttta 41924216  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||||||||    
T  41924217 agtttaggtttaggcttaaat 41924237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 44792702 - 44792479
Alignment:
Q  3 cattacccgcactttaaccatgaaaagac-----aataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataat 97  Q
    |||||||||||||||||| ||| ||| ||     || ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||    
T  44792702 cattacccgcactttaactatggaaaaacaaaaaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataat 44792603  T
Q  98 acgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttgg 197  Q
    | ||| ||| ||||||||||||||  |||||||   ||||||   ||||| ||| ||||| | ||||||||||||||||||||||||||||||| ||||     
T  44792602 atgaaccgtggtatttagtcaaatagaaaacatctgaaatatgcctaaaaaattatacaccagcatgatggagttgttattgtattaagtagttgtttgt 44792503  T
Q  198 tttaggttttagtttaggcttaaa 221  Q
    |||| ||||  |||||||||||||    
T  44792502 tttaagtttaggtttaggcttaaa 44792479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 203
Target Start/End: Original strand, 35203302 - 35203496
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  |||| |||| |||| ||||| |||   |||| ||||||    
T  35203302 tacccgcactttaactatgaaaagacaataaaaatatcacaattgaaataaaactatggttcaaattttttcaaatcaactcgtaa---aatatgaatcg 35203398  T
Q  106 tagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttagg 203  Q
     ||||||||   |||| |||||||| ||||| ||| || ||| |||||| |||| || || |||    ||||||||||||||||||||| ||||||||    
T  35203399 cagtatttaacaaaataaaaaacatgcaaaacatccttcaaaaattgtatactagcaagagggatcaattattgtattaagtagtttttaggtttagg 35203496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 222
Target Start/End: Complemental strand, 13735648 - 13735475
Alignment:
Q  49 tgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaat 148  Q
    ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||  ||||||| ||||||||   |||||     
T  13735648 tgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaatcgtggtatttagttaaatagaaaacatccaaaatattcctaaaaa 13735549  T
Q  149 attgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    ||| |||||   ||||| |||||||||||||||||||  |||| ||||||||| |||| |||||| ||| ||||    
T  13735548 attatacaccggcatgacggagttgttattgtattaaacagttgtttggtttaagtttaagtttatgctgaaat 13735475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 35688350 - 35688478
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatc--acaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||||||| |||||| |||||||||||||||||| | |  |||||||||||||||||||| || ||| | ||| |||| |||||||||||||||| |    
T  35688350 cattacccgcattttaactatgaaaagacaataaaaaaaacccacaattgaaataaaactatgatccaaaaaatttcaaatcaactcataaaataatatg 35688449  T
Q  101 aatcgtagtatttagtcaaattaaaaaca 129  Q
    ||||||||||||||| ||||| |||||||    
T  35688450 aatcgtagtatttagccaaataaaaaaca 35688478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 45079265 - 45079126
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||| ||    
T  45079265 cattacccgcactttctcgatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatatga 45079166  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    |||||||||||||| |||||  |||||||| |||||||||    
T  45079165 atcgtagtatttagccaaataaaaaaacatccaaaatatc 45079126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 41410317 - 41410179
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||| ||||||  | |||||||||||||||||| |||||||||||||||||||||||| || |||  | || |||| |||| |||||||| || ||    
T  41410317 cattacccacactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtatga 41410218  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    |||||||||||||| ||||| |||||||| |||||||||    
T  41410217 atcgtagtatttagccaaataaaaaacatccaaaatatc 41410179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 30248114 - 30247975
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaa-aacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||||||||||||||| || ||||||||||||||||||||||| || |||  | || |||| |||| |||||||| |||||    
T  30248114 cattacccgcactttctctatgaaaagacaataaataatatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacga 30248015  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    |||||||||||||| |||||  |||||||| |||||||||    
T  30248014 atcgtagtatttagccaaataaaaaaacatccaaaatatc 30247975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 42881387 - 42881498
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||||| ||||||||  | ||| |||||||||||||||||||||||||||||||||||||||||| |  || |||| ||||||||||||| |||  |    
T  42881387 cattacccgtactttaactgtaaaaggacaataaaaacatcacaattgaaataaaactatggtcaaaa-aaattcaaatcaactcataaaatagtacaca 42881485  T
Q  103 tcgtagtatttag 115  Q
    |||||||||||||    
T  42881486 tcgtagtatttag 42881498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 27346619 - 27346753
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    |||||||||||||| ||||||||||||||||||| || |||||||||||||||| |||| | |||| | || ||| | |||| |||||||| ||  ||||    
T  27346619 tacccgcactttaatcatgaaaagacaataaaaaacaccacaattgaaataaaattatgataaaaaaaattcaaa-tcaactaataaaatagtataaatc 27346717  T
Q  105 gtagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    ||||||||||| ||||| |||||||| |||||||||    
T  27346718 gtagtatttagccaaataaaaaacatccaaaatatc 27346753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 42096802 - 42096663
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||| || |||  | || |||| | || |||||||| |||||    
T  42096802 cattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcatctaataaaatagtacga 42096703  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    |||||| ||||||| |||||  |||||||| |||||||||    
T  42096702 atcgtaatatttagccaaataaaaaaacatccaaaatatc 42096663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 32995282 - 32995420
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||||||||||||  |||| ||||| |||||||| || |||| |||||||||||||||| || ||| ||||| |||| |||| |  |||||||| ||    
T  32995282 cattacccgcactttagacatggaaagataataaaaatcaccacacttgaaataaaactatgatccaaaaatttttaaatcaacttacgaaataatatga 32995381  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
    |||||| |||||||||||||  |||||||||||||||||    
T  32995382 atcgtaatatttagtcaaataaaaaaacattcaaaatat 32995420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 54444455 - 54444342
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaac-atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||| |||||||||| ||||||||||||||||||  || || |||||||||||||||||||| ||  ||||| |||| ||||||||||||| || ||    
T  54444455 cattaccagcactttaactatgaaaagacaataaaaaatattacgattgaaataaaactatggtccaagaattttcaaatcaactcataaaatagtatga 54444356  T
Q  102 atcgtagtatttag 115  Q
    |||||| |||||||    
T  54444355 atcgtattatttag 54444342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 39144175 - 39143973
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaaga-caataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatac 99  Q
    |||||||| | ||||||||| || |||| | ||||||||| ||| ||||| |||||||| |||  | ||||||||| ||| | ||||||||||||| |||    
T  39144175 ctcattactctcactttaactataaaaaaaacaataaaaatatcgcaattaaaataaaattattttaaaaatatttcaaa-tcaactcataaaatagtac 39144077  T
Q  100 gaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtt 199  Q
    ||||| |||||||||   |||| || ||||| ||||| ||| |||||| |||||| |  |||| || ||| | |||||||||||| ||||||||| ||||    
T  39144076 gaatcatagtatttaacaaaataaacaacatccaaaacatccttaaaaaattgtatatcaacaggagggattagttattgtattatgtagtttttaggtt 39143977  T
Q  200 tagg 203  Q
    ||||    
T  39143976 tagg 39143973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 157
Target Start/End: Complemental strand, 50622315 - 50622157
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatatttt-----aaaattaactcataaaataata 98  Q
    ||||| ||||||||| ||||||||||||||||||  |||||||||||||||||||||||| || |  | ||||     |||| | ||||| |||||| ||    
T  50622315 tacccacactttaactatgaaaagacaataaaaaaacatcacaattgaaataaaactatgatctagttttttttaaaaaaaacttactcagaaaatagta 50622216  T
Q  99 cgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacac 157  Q
    ||||| ||||||||||  ||||| ||||| ||||||||||||  ||||| |||||||||    
T  50622215 cgaattgtagtatttaaccaaataaaaaatattcaaaatatccctaaaaaattgtacac 50622157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 14418284 - 14418418
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||| ||||| ||| ||  ||| | ||| |||| | ||||||||||| || ||||||    
T  14418284 tacccgcactttaactatgaaaagataataaaaatatcacaattgaattaaaattatagttcaaaaaatttcaaatcacctcataaaatagtatgaatcg 14418383  T
Q  106 tagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    ||||||||| | |||| ||||| ||  ||||||||    
T  14418384 tagtatttaataaaataaaaaatatctaaaatatc 14418418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 19454833 - 19454962
Alignment:
Q  3 cattacccgcactttaaccatgaaaa-gacaataaaaacatc--acaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatac 99  Q
    |||||||| || |||||| ||||||| ||||||||||| | |  ||||||||||||||| |||| || ||| | ||| |||| ||||||||||||||||     
T  19454833 cattacccacattttaactatgaaaaagacaataaaaaaaacccacaattgaaataaaattatgatccaaaaaatttcaaatcaactcataaaataatat 19454932  T
Q  100 gaatcgtagtatttagtcaaattaaaaaca 129  Q
    |||||||||||||||| ||||| |||||||    
T  19454933 gaatcgtagtatttagccaaataaaaaaca 19454962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33099692 - 33099794
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||| |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||  ||| | ||| |||| ||||||| ||||  ||||    
T  33099692 ctcatcaccctcactttaactatgaaaagacaataaaaatatcacaattgaaataaaactatggttcaaaaaatttcaaatcaactcatcaaatggtacg 33099791  T
Q  101 aat 103  Q
    |||    
T  33099792 aat 33099794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 8340190 - 8340298
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||| |||||| ||||||||||||||||||  || ||||||||||||||||||||| || ||| | |||  ||| ||||||||||||| || ||    
T  8340190 attacccgcattttaactatgaaaagacaataaaaaaccaccacaattgaaataaaactatgatccaaaaaatttcgaatcaactcataaaatagtatga 8340289  T
Q  102 atcgtagta 110  Q
    |||||||||    
T  8340290 atcgtagta 8340298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 25630368 - 25630260
Alignment:
Q  12 cactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtat 111  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| |||||||| |||  ||||  ||| |||||||||| || || ||||||| ||||    
T  25630368 cactttaactatgaaaaaacaataaaaacatcacaattgaaataaacctatggtccaaaagtttttcaatcaactcataaagtagtatgaatcgt-gtat 25630270  T
Q  112 ttagtcaaat 121  Q
    |||| |||||    
T  25630269 ttagccaaat 25630260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 48583776 - 48583838
Alignment:
Q  2 tcattacccgcactttaaccatgaaaagacaat-aaaaacatcacaattgaaataaaactatg 63  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  48583776 tcattacccgcactttaaccatgaaaagacaataaaaaacaccacaattgaaataaaattatg 48583838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 49374841 - 49374979
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| ||||||||||| ||| |||| || |||  |||||||||||||||| || |||| |||| |||| |||| |  |||||||| ||    
T  49374841 cattacccgcactttagccatgaaaagataatgaaaatcaccacgcttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatga 49374940  T
Q  102 atcgtagtatttagtcaaatta-aaaacattcaaaatat 139  Q
    |||||| ||||||| ||||| | ||||||| ||||||||    
T  49374941 atcgtaatatttagccaaataagaaaacatccaaaatat 49374979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 2013114 - 2012977
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaac-atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||| || ||||||||  || |||||||||||||||  ||||||||||||||||||||||| || || | |||| |||  ||||||||||||| ||  |    
T  2013114 cattatccacactttaattataaaaagacaataaaaaatatcacaattgaaataaaactatgatccaattttttttaaagcaactcataaaatagtagaa 2013015  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaata 138  Q
    ||||||||||| || |||||  ||||||||||||||||    
T  2013014 atcgtagtattaagccaaataaaaaaacattcaaaata 2012977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 10085319 - 10085195
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||||||||||| ||||||||||| |||||||| || |||| |||||||||||||||| |  |||| |||| |||| |||| |  |||||||| |||    
T  10085319 attacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataaaactatgatgcaaatttttttaaatcaacttacgaaataatatgaa 10085220  T
Q  103 tcgtagtatttagtcaaattaaaaa 127  Q
    ||||| ||||||  ||||| |||||    
T  10085219 tcgtaatatttaaccaaataaaaaa 10085195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 10192239 - 10192115
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||||||||||| ||||||||||| |||||||| || |||| |||||||||||||||| |  |||| |||| |||| |||| |  |||||||| |||    
T  10192239 attacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataaaactatgatgcaaatttttttaaatcaacttacgaaataatatgaa 10192140  T
Q  103 tcgtagtatttagtcaaattaaaaa 127  Q
    ||||| ||||||  ||||| |||||    
T  10192139 tcgtaatatttaaccaaataaaaaa 10192115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 26787656 - 26787519
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggt-caaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||| ||||||||  || ||||||||||||||||||||| ||||||||||||||||| | |||  | |||| |||| |||||||||||||  |  |    
T  26787656 cattacccacactttaattat-aaaagacaataaaaacatcaccattgaaataaaactatgatccaatttttttttaaatcaactcataaaatagcagaa 26787558  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
    |||||||||||||  |||||  |||||||| ||||||||    
T  26787557 atcgtagtatttaaccaaataaaaaaacatccaaaatat 26787519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 46819209 - 46819271
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtc 66  Q
    ||||||| ||||||| | ||||||| | |||||||||||||||||||||||||||||||||||    
T  46819209 attacccacactttagctatgaaaaaagaataaaaacatcacaattgaaataaaactatggtc 46819271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 6083601 - 6083477
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||||||||||| | ||||| | || ||||||| ||||||| |||||||||||||||| || |||  |  | |||| || |||||||||| ||||||    
T  6083601 attacccgcactttatctatgaagatactataaaaaacatcacatttgaaataaaactatgatccaaaattaatcaaatcaagtcataaaatagtacgaa 6083502  T
Q  103 tcgtagtatttagtcaaattaaaaa 127  Q
    ||| ||||||||| ||||| |||||    
T  6083501 tcgaagtatttagccaaataaaaaa 6083477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 33118961 - 33119076
Alignment:
Q  25 aaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaatta 123  Q
    |||||||||||||| ||||||||||||||||||||||||| || || | |||| |||  ||||| ||||||| ||  |||| || ||||||| ||||| |    
T  33118961 aaaagacaataaaaaacatcacaattgaaataaaactatgatccaattttttttaaagcaactcgtaaaatagtagaaatcataatatttagccaaataa 33119060  T
Q  124 aaaacattcaaaatat 139  Q
    |||| || ||||||||    
T  33119061 aaaaaatccaaaatat 33119076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 35732282 - 35732409
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatac 99  Q
    |||||||||| ||||||| ||||| ||||| |||||||| || |||| |||||||||||||| | || |||| |||| |||| |||| |  ||||||||     
T  35732282 ctcattacccacactttagccatggaaagataataaaaatcaccacacttgaaataaaactaagatccaaatttttttaaatcaacttacgaaataatat 35732381  T
Q  100 gaatcgtagtatttagtcaaattaaaaa 127  Q
    |||||||| ||||||  ||||| |||||    
T  35732382 gaatcgtaatatttaaccaaataaaaaa 35732409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 43657306 - 43657443
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa---catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||||||||| ||||||||||| ||||||||   |  |||| ||||||||||||| || || |||| |||| |||| |||| |  |||||||| |||    
T  43657306 tacccgcactttagccatgaaaagataataaaaatcaccacacacttgaaataaaactttgatccaaatttttttaaatcaacttacgaaataatatgaa 43657405  T
Q  103 tcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
    | ||||||||||| |||||  |||||||| ||||||||    
T  43657406 ttgtagtatttagccaaataaaaaaacatccaaaatat 43657443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 5908280 - 5908417
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaac-atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||||||||||| |||| |||||| ||||||||  | |||| ||||||||||||| || || || | |||| |||| |||| |  |||||||| |||    
T  5908280 attacccgcactttagccataaaaagataataaaaattaccacacttgaaataaaactgtgatccaattttttttaaatcaacttacgaaataatatgaa 5908379  T
Q  103 tcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
    ||||| ||||||| |||||  |||||||| ||||||||    
T  5908380 tcgtaatatttagccaaataaaaaaacatccaaaatat 5908417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 139
Target Start/End: Original strand, 49193543 - 49193648
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatatttt-aaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattca 133  Q
    ||||| |||| |||| ||||||||||||| || |||| |||| ||||| ||| | ||||||||||||||| || |||||||||||||| || |||||  |    
T  49193543 aaaaatatcataatttaaataaaactatgatctaaatctttttaaaatcaacacgtaaaataatacgaattgttgtatttagtcaaataaagaacatcta 49193642  T
Q  134 aaatat 139  Q
    ||||||    
T  49193643 aaatat 49193648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 7940379 - 7940431
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaata 55  Q
    |||||||||||||||| | ||||||||| | ||||||||||||||||||||||    
T  7940379 cattacccgcactttagctatgaaaagatagtaaaaacatcacaattgaaata 7940431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 9163048 - 9162944
Alignment:
Q  12 cactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagta 110  Q
    ||||||||  || ||||||||||||||| |||||||||| ||||||||||||| || || | |||| |||   |||||||||||| ||  ||||||||||    
T  9163048 cactttaattataaaaagacaataaaaaacatcacaattaaaataaaactatgatccaattttttttaaagctactcataaaatagtagaaatcgtagta 9162949  T
Q  111 tttag 115  Q
    |||||    
T  9162948 tttag 9162944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 46584714 - 46584808
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacat--cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaata 95  Q
    ||||||||||| |||||| ||||||||| |||||||| ||  ||||||||||||||||| | |||| |||  |||| |||| || ||||||||||    
T  46584714 cattacccgcaatttaactatgaaaagataataaaaatatcacacaattgaaataaaacgacggtctaaaatttttcaaatcaaatcataaaata 46584808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 30964594 - 30964488
Alignment:
Q  22 atgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaa 120  Q
    ||||||||| |||||||| || |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| |||||||| ||||||  ||||    
T  30964594 atgaaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatgaatcgtaatatttaaccaaa 30964495  T
Q  121 ttaaaaa 127  Q
    | |||||    
T  30964494 taaaaaa 30964488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 30980406 - 30980300
Alignment:
Q  22 atgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaa 120  Q
    ||||||||| |||||||| || |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| |||||||| ||||||  ||||    
T  30980406 atgaaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatgaatcgtaatatttaaccaaa 30980307  T
Q  121 ttaaaaa 127  Q
    | |||||    
T  30980306 taaaaaa 30980300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 27064240 - 27064378
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||| ||||||||  || ||||| |||||||| ||||||| ||||||||||||||||| || |  | |||| |||  |||||||||||||  |  |    
T  27064240 cattacccacactttaattataaaaaggcaataaaaaacatcaccattgaaataaaactatgatccatttttttttaaagcaactcataaaatagcagaa 27064339  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
    |||| ||||||||  |||||  |||||||| ||||||||    
T  27064340 atcgaagtatttatccaaataaaaaaacatccaaaatat 27064378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38694875 - 38694837
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaa 39  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  38694875 ctcattacccgcactttagccatgaaaagataataaaaa 38694837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 42284564 - 42284783
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||    
T  42284564 cattatccacactttaactatgaaaagacaataaaaacatcacaattgaaataaaactatgaacaaaatattttaaaattaactcataaaataatatgaa 42284663  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| |||||    
T  42284664 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacaggatgtaattgttattgtattaagtagttttttgatttag 42284763  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||| ||||||    
T  42284764 gttttagtttaggtttaaat 42284783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 43224377 - 43224596
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||| |||    
T  43224377 cattacccgcactttaactatgaaaaaacaataaaaacatcacaattgaaataaaattatgatcaaaatcttttaaaattaactaataaaataataagaa 43224476  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||   ||  |||||||||||| ||||||||| ||||| |||||||||    
T  43224477 tcgtagtatttagtcaaattaaaaacatccaaaatatctctaaaaaattgtacaccggcagaatggagttgttactgtattaagcagtttattggtttag 43224576  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||    
T  43224577 gttttagtttaggcttaaat 43224596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 33067533 - 33067317
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    ||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||    
T  33067533 tacccgcactttagcaatgaaaagacaataaaaatatcacaattgaaataaaactatggtctacatcttttaaaattaactcataaaataatatgaatcg 33067434  T
Q  106 tagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggtt 205  Q
    ||||||||||||||||||||||||| |||||||||| | ||| |||||||||   || ||||||||| ||||||||||||| | |||| ||||||| |||    
T  33067433 tagtatttagtcaaattaaaaacatccaaaatatctcttaaaaattgtacaccggcaagatggagtttttattgtattaagcaattttctggtttatgtt 33067334  T
Q  206 ttagtttaggcttaaat 222  Q
    |||||||||||||||||    
T  33067333 ttagtttaggcttaaat 33067317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 43702469 - 43702252
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||  ||||||||||||    
T  43702469 cattacccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaactatggtctaaatctattaaaattaactca--aaataatacgaa 43702372  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    || || |||||||||||||||||||||| |||||||||| ||||| |||||||||   || ||| ||||||||||||||||||  |||||||| ||||||    
T  43702371 tcataatatttagtcaaattaaaaacatccaaaatatctctaaaaaattgtacacctgcaggatagagttgttattgtattaaacagtttttttgtttag 43702272  T
Q  203 gttttagtttaggcttaaat 222  Q
    |||||| |||||| ||||||    
T  43702271 gttttaatttaggtttaaat 43702252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 3551588 - 3551369
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||| |||    
T  3551588 cattacccacactttaactatgaaaagacaatgaaaacatcacaattgaaatagaactatggtccaaattttttaaaattaacttataaaataatatgaa 3551489  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    | | |||||| |||||||| ||||||||| ||||||||  ||||| |||||||||  |||  ||||||||||||||||||||||||||||||||||||||    
T  3551488 ttgcagtattaagtcaaataaaaaacatttaaaatatccctaaaaaattgtacaccgacagaatggagttgttattgtattaagtagttttttggtttag 3551389  T
Q  203 gttttagtttaggcttaaat 222  Q
    |||| | |||||||||||||    
T  3551388 gtttaaatttaggcttaaat 3551369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 6 - 185
Target Start/End: Original strand, 9477708 - 9477887
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||    
T  9477708 tacccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaactatggtctaaaacttttaaaattaactcataaaataatatgaatcg 9477807  T
Q  106 tagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaa 185  Q
    |||||||||||||||||||||||||  ||||||||| ||||| |||||||||   || ||||||||||||||||||||||    
T  9477808 tagtatttagtcaaattaaaaacatctaaaatatctctaaaaaattgtacaccggcaggatggagttgttattgtattaa 9477887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 16567626 - 16567845
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  16567626 cattacccgcactttaactatggaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 16567725  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||||||||||||||||||||| |||||||||     
T  16567726 ccgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttgtttggtttaa 16567825  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  16567826 gtttaggtttaggcttaaat 16567845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 16598036 - 16597817
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  16598036 cattacccgcactttaactatggaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 16597937  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||||||||||||||||||||| |||||||||     
T  16597936 ccgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttgtttggtttaa 16597837  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  16597836 gtttaggtttaggcttaaat 16597817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 46181272 - 46181491
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  46181272 cattacccgcactttaactatggaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 46181371  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||||||||||||||||||||| |||||||||     
T  46181372 ccgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttgtttggtttaa 46181471  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  46181472 gtttaggtttaggcttaaat 46181491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 10066314 - 10066093
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||| ||||||| |||| |||||  |||||||| |||||||||||||   ||  ||| |||||||||||||||||||||||||| |    
T  10066314 cattacccgcactttaactatgaaaaaacaaaaaaaaaacatcacaaatgaaataaaactacaatcccaattttttaaaattaactcataaaataatatg 10066215  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    ||||||  |||||||||||||  ||||||| |||||||||  ||||| ||| ||||| |||||||||||||||||||||||||||| |||| | ||||||    
T  10066214 aatcgtgttatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacacgaacatgatggagttgttattgtattaagcagttgtatggttt 10066115  T
Q  201 aggttttagtttaggcttaaat 222  Q
    | ||||  ||||||||||||||    
T  10066114 aagtttaggtttaggcttaaat 10066093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 35092790 - 35092573
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataa-aaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    ||||||||||||||| ||||||| |||| || ||| ||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||||    
T  35092790 tacccgcactttaactatgaaaaaacaaaaacaaaaatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaatc 35092691  T
Q  105 gtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggt 204  Q
    || |||||||||||||| |||||||| |||||||||  ||||| ||| ||||   |||||||||||||||||||||| |||| |||| ||||||||| ||    
T  35092690 gtggtatttagtcaaataaaaaacatccaaaatatccctaaaaaattatacatcgacatgatggagttgttattgtaataagcagttgtttggtttaagt 35092591  T
Q  205 tttagtttaggcttaaat 222  Q
    ||  ||||||||||||||    
T  35092590 ttaggtttaggcttaaat 35092573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 222
Target Start/End: Original strand, 39414627 - 39414843
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    ||||||||||||||| ||||||| |||| ||||||||| ||| |||||||||||||   ||  ||| |||||||||||||||||||||||||| ||| ||    
T  39414627 tacccgcactttaactatgaaaaaacaaaaaaaacatcgcaaatgaaataaaactacaatcccaattttttaaaattaactcataaaataatatgaaccg 39414726  T
Q  106 tagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggtt 205  Q
    | ||||||||||||||  ||||||| | |||||| | ||||| ||| |||||   ||||||||||||||||||||||||||||||| ||||||||| |||    
T  39414727 tggtatttagtcaaatagaaaacatccgaaatatttctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttgtttggtttaagtt 39414826  T
Q  206 ttagtttaggcttaaat 222  Q
    |  ||||||||||||||    
T  39414827 taggtttaggcttaaat 39414843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 5023247 - 5023041
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa---catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatac 99  Q
    |||| |||| |||||||| ||||||| |||| |||||   |||||||| ||||||||||||| | ||  ||| ||||||||||||||||||||||||||     
T  5023247 cattgcccgtactttaactatgaaaaaacaaaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatat 5023148  T
Q  100 gaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtt 199  Q
    ||||||| ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||   |||||||| ||||||||||||||||| |||| |||||||    
T  5023147 gaatcgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcatgatggggttgttattgtattaagcagttgtttggtt 5023048  T
Q  200 taggttt 206  Q
    || ||||    
T  5023047 taagttt 5023041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 31454957 - 31455178
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa--acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||| ||||||| |||| ||||  ||||||||| ||||||||||||| | ||  ||| ||| |||||||||||||||||||||| |    
T  31454957 cattacccgcactttaactatgaaaaaacaaaaaaaaaacatcacaaatgaaataaaactacgatctcaatttttcaaaattaactcataaaataatatg 31455056  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    || ||| ||||||||| ||||  ||||||| | ||||||   ||||| ||| |||||   ||||||| |||||||||||||||||| | || ||||||||    
T  31455057 aaccgtggtatttagttaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatgaagttgttattgtattaagcaattgtttggttt 31455156  T
Q  201 aggttttagtttaggcttaaat 222  Q
    | ||||  ||||||||||||||    
T  31455157 aagtttaggtttaggcttaaat 31455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 222
Target Start/End: Original strand, 3363055 - 3363233
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaa 134  Q
    ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||||||| ||||||||||||||  ||||||| |||    
T  3363055 aaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaatcgtggtatttagtcaaatagaaaacatccaa 3363154  T
Q  135 aatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    |||||| |||||         |||  |||||||||||||||| |||||||||||||| ||||||||| ||||  ||||||||| ||||    
T  3363155 aatatccttaaa---------actggcatgatggagttgttagtgtattaagtagttgtttggtttaagtttaggtttaggctgaaat 3363233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 46783125 - 46783311
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    ||||||||||||||| ||||||| |||| |||||  ||||| || | ||||||||||||| ||  ||| |||||||||||||||||||||||||| ||||    
T  46783125 tacccgcactttaactatgaaaaaacaaaaaaaaaacatcaaaaataaaataaaactatgatcccaattttttaaaattaactcataaaataatatgaat 46783224  T
Q  104 cgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtac----actaacatgatggagttgttattgtattaag 186  Q
    ||| ||||||||||||||  ||||||| |||||||||  ||||| ||| |||    | ||| |||||||||||||||||||||||||    
T  46783225 cgtggtatttagtcaaatataaaacatccaaaatatccctaaaaaattatacataaaataatatgatggagttgttattgtattaag 46783311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 19805097 - 19805305
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| |||| ||||| ||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  19805097 cattacccgcactttaactatgaaaaaacaaaaaaaatatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 19805196  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||| ||||||||||||||  ||||||| |||||  |           | |||||   |||||||||||||||||||||||||| |||| |||||||||     
T  19805197 tcgtggtatttagtcaaatagaaaacatccaaaaagt-----------tatacaccggcatgatggagttgttattgtattaagcagttgtttggtttaa 19805285  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||| ||||    
T  19805286 gtttaggtttaggctgaaat 19805305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 30391607 - 30391743
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| || ||| | ||| |||| ||||||||||||| || ||    
T  30391607 cattatccgcactttaaccatgaaaagacaataaaaaacagcacaattgaaataaaaccatgatccaaaaaatttcaaatcaactcataaaatagtatga 30391706  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    |||||||||||||||||||  ||||||||  ||||||||    
T  30391707 atcgtagtatttagtcaaa--aaaaacatctaaaatatc 30391743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 73 - 222
Target Start/End: Original strand, 27398718 - 27398867
Alignment:
Q  73 ttttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagtt 172  Q
    |||| ||||||||||||||||||||| ||||||| ||||||| ||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||    
T  27398718 tttttaaattaactcataaaataatatgaatcgtggtatttaatcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagtt 27398817  T
Q  173 gttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    |||||||||||||| |||| ||||||||| ||||  ||||||||||||||    
T  27398818 gttattgtattaagcagttgtttggtttaagtttaggtttaggcttaaat 27398867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 30738689 - 30738555
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||  | | |||| |||||| ||||||||||| || | |    
T  30738689 cattacctgcactttaactatgaaaagacaataaaaacatcacaattgaaat-aaactatggtcctagt-ttttcaaattacctcataaaatagtatg-a 30738593  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    | |||||||||||||| || ||||||||||||||||||    
T  30738592 tggtagtatttagtcatataaaaaacattcaaaatatc 30738555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 17172274 - 17172135
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||||||    
T  17172274 cattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacga 17172175  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  17172174 attgtagtatttagccaaataaaaaaacatccaaaatatc 17172135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 40342371 - 40342244
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatc-acaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||||||| |||||| |||||||||||||||||| | | |||||||||||||||||||| || ||| | ||| |||| |||| ||||||||||| ||    
T  40342371 cattacccgcattttaactatgaaaagacaataaaaaaacccacaattgaaataaaactatgatccaaaaaatttcaaatcaactaataaaataatatga 40342272  T
Q  102 atcgtagtatttagtcaaattaaaaaca 129  Q
    |||||||||||||| ||||| |||||||    
T  40342271 atcgtagtatttagccaaataaaaaaca 40342244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 48558739 - 48558620
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||||||||||||||||||||||||||||||||| || |||| |||||||||||| ||| || ||| | ||| |||| ||||||||||||| || ||    
T  48558739 cattacccgcactttaaccatgaaaagacaataaaaaacagcacagttgaaataaaaccatgatccaaaaaatttcaaatcaactcataaaatagtatga 48558640  T
Q  102 atcgtagtatttagtcaaat 121  Q
    ||||||||||||| ||||||    
T  48558639 atcgtagtatttaatcaaat 48558620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 38398478 - 38398285
Alignment:
Q  12 cactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtat 111  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||  | | |||| |||| ||||||||||||| || ||| | || |||    
T  38398478 cactttaactatgaaaagacaataaaaacattacaattgaaataaaactatgatc-catttttttcaaataaactcataaaatattaggaaccataatat 38398380  T
Q  112 ttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttt 206  Q
    || | ||||| |||||||| ||||||||  || ||| ||||||||| | || || ||||  |||| | ||||||||||||||| |||||| ||||    
T  38398379 ttggccaaataaaaaacatccaaaatatacttcaaaaattgtacaccagcaagagggagcggttactttattaagtagtttttaggtttaagttt 38398285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 38401020 - 38400827
Alignment:
Q  12 cactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtat 111  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||  | | |||| |||| ||||||||||||| || ||| | || |||    
T  38401020 cactttaactatgaaaagacaataaaaacattacaattgaaataaaactatgatc-catttttttcaaataaactcataaaatattaggaaccataatat 38400922  T
Q  112 ttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttt 206  Q
    || | ||||| |||||||| ||||||||  || ||| ||||||||| | || || ||||  |||| | ||||||||||||||| |||||| ||||    
T  38400921 ttggccaaataaaaaacatccaaaatatacttcaaaaattgtacaccagcaagagggagcggttactttattaagtagtttttaggtttaagttt 38400827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 2959995 - 2960112
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||||||||||||| |||| || ||| | ||| |||| ||||||||||||| ||||||    
T  2959995 attacccgcactttaactatgaaatgacaataaaaaacatcacaattgaaataaaattatgatccaaaaaatttcaaatcaactcataaaatagtacgaa 2960094  T
Q  103 tcgtagtatttagtcaaa 120  Q
    | ||||||||||| ||||    
T  2960095 ttgtagtatttagccaaa 2960112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 44300774 - 44300911
Alignment:
Q  5 ttacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    |||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||| || |||  | || |||| |||| |||||||| |||||||    
T  44300774 ttacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacgaat 44300873  T
Q  104 cgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    |||||||||||| |||||  |||||||| |||||||||    
T  44300874 cgtagtatttagccaaataaaaaaacatccaaaatatc 44300911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 40789588 - 40789447
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatac 99  Q
    |||||||||||||||||  | ||||||| |||||||||| |||||||||||||||||||||||| || |||  | || |||| |||| |||||||| |||    
T  40789588 ctcattacccgcactttctctatgaaaaaacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtac 40789489  T
Q  100 gaatcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
     ||||||| |||||||||||||  |||||||| |||||||||    
T  40789488 aaatcgtaatatttagtcaaataaaaaaacatccaaaatatc 40789447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 28067326 - 28067187
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| |||| || ||| | ||| |||| |||| |||||||| ||  |    
T  28067326 cattacctgcactttaaccatgaaaagacaataaaaaacaccacaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataa 28067227  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  28067226 attgtagtatttagccaaataaaaaaacatccaaaatatc 28067187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 1876098 - 1875969
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacat---cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatac 99  Q
    ||||||||||| |||||| |||||||||||||||||| |    | |||||||||||||| |||| || ||| | ||| |||| ||||||||||||||||     
T  1876098 cattacccgcattttaactatgaaaagacaataaaaaaaaacccgcaattgaaataaaattatgatccaaaaaatttcaaatcaactcataaaataatat 1875999  T
Q  100 gaatcgtagtatttagtcaaattaaaaaca 129  Q
     ||||||||||||||| ||||| |||||||    
T  1875998 caatcgtagtatttagccaaataaaaaaca 1875969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 5924125 - 5924017
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaa--atattttaaaattaactcataaaataata 98  Q
    |||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||  || ||   | |||| |||| ||||||||||||| ||    
T  5924125 cattacccgcactttaactatgaaaagacaataaaaaagcatcacaattgaaataaaactataatccaattttttttttaaatcaactcataaaatagta 5924026  T
Q  99 cgaatcgta 107  Q
    |||||||||    
T  5924025 cgaatcgta 5924017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 25309565 - 25309432
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    ||||||||||||||| | || ||||||||||||| |||||||| ||||||||||||||||  ||| | ||| |||| ||||||||||| | || ||||||    
T  25309565 tacccgcactttaactacgagaagacaataaaaatatcacaatggaaataaaactatggttcaaa-aatttcaaatcaactcataaaaaagtatgaatcg 25309467  T
Q  106 tagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    ||| |||||   |||| |||||||| |||||||||    
T  25309466 tagcatttaacaaaataaaaaacatccaaaatatc 25309432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 27039791 - 27039660
Alignment:
Q  24 gaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaatta 123  Q
    ||||||||||||||||| ||||||||||||||| | ||||||  |||  ||||  ||| ||||||||||||| ||||||| ||||||||| | |||| ||    
T  27039791 gaaaagacaataaaaacgtcacaattgaaataagattatggtttaaaagttttcgaataaactcataaaatagtacgaattgtagtatttcgccaaa-ta 27039693  T
Q  124 aaaacattcaaaatatctttaaaatattgtaca 156  Q
    ||| ||| ||| | |||| ||||||||||||||    
T  27039692 aaatcatccaagagatctctaaaatattgtaca 27039660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 12499658 - 12499520
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| ||||||||||| |||||||| || |||| ||||||||||| |||| || || | |||| |||| |||| |  |||||||| ||    
T  12499658 cattacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataaaattatgatccaattttttttaaatcaacttacgaaataatatga 12499559  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
    |||||| ||||||| |||||  |||||||| ||||||||    
T  12499558 atcgtaatatttagccaaataaaaaaacatccaaaatat 12499520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 21153261 - 21153395
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaat-aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||||||  ||  | ||| | ||| |||| ||||| ||||||| || ||||     
T  21153261 tacccgcactttaaccataaaaagacaataaaaaacaccacaattgaaataaaac--tgaaccaaaaaatttcaaatcaactcgtaaaatagtatgaatt 21153358  T
Q  105 gtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    ||||||||||| |||||  |||||||| |||||||||    
T  21153359 gtagtatttagccaaataaaaaaacatccaaaatatc 21153395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 16278488 - 16278580
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaata 95  Q
    |||||||| ||||||||  || ||||||||||||||||||||||||||| ||||||||||| || || | |||| |||  |||||||||||||    
T  16278488 cattacccacactttaattataaaaagacaataaaaacatcacaattgatataaaactatgatccaattttttttaaagcaactcataaaata 16278580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 11244095 - 11244186
Alignment:
Q  15 tttaaccatgaaaagacaataaaa-acatcacaattgaaa-taaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    |||||| ||||||||||||||||| | ||||||||||||| |||||||||||||  || ||||| |||| ||||||||||||| || |||||    
T  11244095 tttaactatgaaaagacaataaaatatatcacaattgaaaataaaactatggtcccaaaattttcaaatcaactcataaaatagtaagaatc 11244186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 9223691 - 9223813
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    ||||||||||||| | ||||||||| |||||||| || |||| |||||||||||||||| || || | |||| |||| |||| |  |||||||| |||||    
T  9223691 tacccgcactttagcaatgaaaagataataaaaatcaccacacttgaaataaaactatgatccaattttttttaaatcaacttacgaaataatatgaatc 9223790  T
Q  105 gtagtatttagtcaaattaaaaa 127  Q
    ||| ||||||  ||||| |||||    
T  9223791 gtaatatttaaccaaataaaaaa 9223813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 43218675 - 43218721
Alignment:
Q  12 cactttaaccatgaaaagacaataaaaacatcacaattgaaataaaa 58  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||    
T  43218675 cactttaactatgaaaagacaataaaaatatcacaattgaaataaaa 43218721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 26299213 - 26299317
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||| ||||||||||  |||||||||| |||||||| ||||||| ||| |||||||||||| || |||| |||| |||| |||| |  |||||||| |||    
T  26299213 attatccgcactttagtcatgaaaagataataaaaatcatcacatttgtaataaaactatgatccaaatttttttaaatcaacttacgaaataatatgaa 26299312  T
Q  103 tcgta 107  Q
    |||||    
T  26299313 tcgta 26299317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 43394330 - 43394270
Alignment:
Q  2 tcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactat 62  Q
    |||||| ||||| |||||  |||||||||||||||||| ||||||||| ||||||||||||    
T  43394330 tcattatccgcattttaattatgaaaagacaataaaaatatcacaattaaaataaaactat 43394270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 38469974 - 38469836
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaat-aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||||||||||||||  | |||| ||||| ||||||| ||||||| ||||||||||||  || | | | ||| |||| |||| |||||||| ||| |    
T  38469974 cattacccgcactttaactgtaaaaatacaataaaaaacaccacaattaaaataaaactataatccataaaatttcaaatcaacttataaaatagtacaa 38469875  T
Q  102 atcgtagtatttagtcaaattaaaaa-cattcaaaatat 139  Q
    || ||| ||||||| ||||| ||||| ||| ||||||||    
T  38469874 atagtaatatttagccaaataaaaaagcatccaaaatat 38469836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 16562008 - 16562069
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatg 63  Q
    |||||||| ||||||| ||||||||||| |||||||| || |||| ||||||||||||||||    
T  16562008 cattacccacactttagccatgaaaagataataaaaatcaccacacttgaaataaaactatg 16562069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 16603654 - 16603593
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatg 63  Q
    |||||||| ||||||| ||||||||||| |||||||| || |||| ||||||||||||||||    
T  16603654 cattacccacactttagccatgaaaagataataaaaatcaccacacttgaaataaaactatg 16603593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 33978884 - 33978989
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||| |||||||||| ||||  ||||| |||||||| || |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| ||    
T  33978884 cattatccgcactttagccattgaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatga 33978983  T
Q  102 atcgta 107  Q
    ||||||    
T  33978984 atcgta 33978989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 139
Target Start/End: Complemental strand, 34152405 - 34152308
Alignment:
Q  43 cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaa-aaacattcaaaatat 139  Q
    |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| |||||||| ||||||| ||||| || |||||| ||||||||    
T  34152405 cacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatgaatcgtaatatttagccaaataaagaaacatccaaaatat 34152308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 34174719 - 34174816
Alignment:
Q  43 cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaa-aaacattcaaaatat 139  Q
    |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| |||||||| ||||||| ||||| || |||||| ||||||||    
T  34174719 cacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatgaatcgtaatatttagccaaataaagaaacatccaaaatat 34174816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 36074179 - 36074118
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaat-aaaaacatcacaattgaaataaaactatg 63  Q
    |||||||||||||||||  || || ||||||| |||||||||||||||||||||||| ||||    
T  36074179 cattacccgcactttaattataaatagacaattaaaaacatcacaattgaaataaaattatg 36074118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 4912721 - 4912653
Alignment:
Q  46 aattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtattta 114  Q
    ||||||||||||||||||||  ||| | ||| |||| |||| ||||||||||| ||||||| |||||||    
T  4912721 aattgaaataaaactatggttcaaaaactttcaaatcaacttataaaataatatgaatcgttgtattta 4912653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 9355227 - 9355117
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa---catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||| |||| ||||| ||||| ||||||||   |  |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| |||    
T  9355227 tacccgcattttagccatggaaagataataaaaatcaccacacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatgaa 9355128  T
Q  103 tcgtagtattt 113  Q
    ||||| |||||    
T  9355127 tcgtaatattt 9355117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 202
Target Start/End: Original strand, 43223598 - 43223710
Alignment:
Q  90 aaaataatacgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtag 189  Q
    |||||| || ||||| |||||||||   |||| |||||||| ||||| ||| || ||| ||| || |||||||| | |||    ||||||||||||||||    
T  43223598 aaaatagtatgaatcatagtatttaacaaaataaaaaacatgcaaaacatccttcaaaaattatatactaacataaaggatcaattattgtattaagtag 43223697  T
Q  190 ttttttggtttag 202  Q
    ||||| |||||||    
T  43223698 tttttaggtttag 43223710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 48644533 - 48644441
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaa 127  Q
    ||||||||||||||| |||||||| | || || || | |||| |||  ||||||||||||| ||| ||| ||||||||||  ||||| |||||    
T  48644533 aaaaacatcacaattcaaataaaattgtgatccaattttttttaaagcaactcataaaatagtacaaattgtagtatttaaccaaatgaaaaa 48644441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 174; Significance: 9e-94; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 34459681 - 34459460
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34459681 ctcattacccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatatg 34459582  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    ||||||||||||||||| ||||||||||||  ||||||||| ||||||||||||||| | || ||||||||||||||| |||||||  ||||||||||||    
T  34459581 aatcgtagtatttagtccaattaaaaacatcaaaaatatctctaaaatattgtacaccagcaggatggagttgttattatattaagctgttttttggttt 34459482  T
Q  201 aggttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||||    
T  34459481 aggttttagtttaggcttaaat 34459460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 2073668 - 2073455
Alignment:
Q  9 ccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtag 108  Q
    ||||||||| || ||||||| |||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  2073668 ccgcactttgactatgaaaacacaataaaaacatcacaattgagataaaactatggtctaaatcttttaaaattaactcataaaataatacgaatcgtag 2073569  T
Q  109 tatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggtttta 208  Q
    ||||||||||||||||||||||  ||||||||| ||||| |||||||||    |  ||||||||||||||||||||| ||||||||||||||||||||||    
T  2073568 tatttagtcaaattaaaaacatctaaaatatctctaaaaaattgtacaccggtagaatggagttgttattgtattaaatagttttttggtttaggtttta 2073469  T
Q  209 gtttaggcttaaat 222  Q
    ||||||||||||||    
T  2073468 gtttaggcttaaat 2073455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 1731093 - 1730880
Alignment:
Q  9 ccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtag 108  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| ||||||||||||| |||| ||||    
T  1731093 ccgcactttaattatgaaaagacaataaaaacatcacaattgaaataaaactatagtctaaatcttttaaaattaattcataaaataatatgaattgtag 1730994  T
Q  109 tatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggtttta 208  Q
    |||||||||||||||||||||| |||||||||| ||||| | ||||||| | || |||| |||||||||||||||||||| |||||||||||||||||||    
T  1730993 tatttagtcaaattaaaaacatccaaaatatctctaaaaaactgtacaccagcaggatgaagttgttattgtattaagtaattttttggtttaggtttta 1730894  T
Q  209 gtttaggcttaaat 222  Q
    |||||||| |||||    
T  1730893 gtttaggcctaaat 1730880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 33983199 - 33983418
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| | ||| ||||||||||||||||||||||| |||| ||||||| ||||||||| |||| |||||||||||||||    
T  33983199 cattacccgcactttaactatgaaaaaataatgaaaacatcacaattgaaataaaattatgatcaaaatcttttaaaatgaactaataaaataatacgaa 33983298  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||  ||| || ||||||||| ||||||||  ||||| ||| |||||    
T  33983299 tcgtagtatttagtcaaattaaaaacatccaaaatatctctaaaaaattgtacactcgcataatagagttgttactgtattaaacagtttattgatttag 33983398  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||    
T  33983399 gttttagtttaggcttaaat 33983418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 22313405 - 22313185
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||| |    
T  22313405 ctcattatccgcactttaactatgaaaaaacaataaaaacatcacaattgaaataaaattatgatcaaaatcttttaaaattaactaataaaataatatg 22313306  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||| |||||||||   ||  |||||||||||| ||||| ||||||||| |||||||    
T  22313305 aatcgtagtatttagtcaaattcaaaa-attcaaaatatctctaaaaaattgtacaccggcagaatggagttgttactgtatcaagtagtttattggttt 22313207  T
Q  201 aggttttagtttaggcttaaat 222  Q
    | ||||||||||||||||||||    
T  22313206 atgttttagtttaggcttaaat 22313185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 4 - 219
Target Start/End: Complemental strand, 28928670 - 28928448
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| |||    
T  28928670 attatccgcactttaactatgaaaagacaataaaaacattacaattgaaataaaactatggtctaaatcttttaaaattatctcataaaataatacaaat 28928571  T
Q  104 cgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatgga-------gttgttattgtattaagtagttttttg 196  Q
    |||||||||||||||| |||||||||| |||||||||| ||||| ||||||||| | |  |||| |        |||||||||||||||| |||||||||    
T  28928570 cgtagtatttagtcaatttaaaaacatccaaaatatctctaaaaaattgtacaccagctggatgaaagttgttattgttattgtattaagcagttttttg 28928471  T
Q  197 gtttaggttttagtttaggctta 219  Q
    |||||||||||||||||||||||    
T  28928470 gtttaggttttagtttaggctta 28928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 21245902 - 21246120
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||| || ||||||||| |||||| ||||| ||||||||||||| ||||||||||||| | ||  ||| ||||||||||||||||||||||||||||||    
T  21245902 cattatccacactttaactatgaaaggacaa-aaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatacgaa 21246000  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||||||||||  |||||||||||||||||| ||||| ||| |||||   ||||||| |||||||||||||| ||| |||| |||||||||     
T  21246001 tcgtagtatttagtcaaatagaaaacattcaaaatatctctaaaaaattatacaccggcatgatgaagttgttattgtatcaagcagttgtttggtttaa 21246100  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  21246101 gtttaggtttaggcttaaat 21246120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 29149064 - 29148845
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  29149064 cattacccgcactttaactatggaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 29148965  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||||||||||||||||||||| |||||||||     
T  29148964 ccgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttgtttggtttaa 29148865  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  29148864 gtttaggtttaggcttaaat 29148845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 42755403 - 42755622
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||| | ||||||||||| | ||  ||  |||||||||||||||||||||||||| |||    
T  42755403 cattacccgcactttaactatgaaaaaacaaaaaaaacatcacaaatcaaataaaactacgatcccaagtttttaaaattaactcataaaataatatgaa 42755502  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||| |||||||||||||| |||||||| |||||||||  ||||| ||| |||||   |||||||||||||||||||||||||| |||| |||||||||     
T  42755503 tcgtggtatttagtcaaataaaaaacatccaaaatatccctaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttggtttaa 42755602  T
Q  203 gttttagtttaggcttaaat 222  Q
     |||   |||||||||||||    
T  42755603 atttagatttaggcttaaat 42755622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 41003382 - 41003604
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa---acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatac 99  Q
    |||||||||||||||||| ||||||| |||| ||||   ||||||||| ||||||||||||| | ||  ||| ||||||||||||||||||||||||||     
T  41003382 cattacccgcactttaactatgaaaaaacaaaaaaaaaaacatcacaaatgaaataaaactacgatccgaattttttaaaattaactcataaaataatat 41003481  T
Q  100 gaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtt 199  Q
    ||||||| ||||||||||||||  ||||||| |||||||||  ||||| ||| ||||    ||||||||||||||||||||||||| ||||| |||||||    
T  41003482 gaatcgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaacggcatgatggagttgttattgtattaaatagttgtttggtt 41003581  T
Q  200 taggttttagtttaggcttaaat 222  Q
    || ||||  ||||||||||||||    
T  41003582 taagtttaggtttaggcttaaat 41003604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 2225005 - 2224786
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| |||| ||||| ||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  2225005 cattacccgcactttaactatgaaaaaacaaaaaaaatatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 2224906  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    | || ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||   |||||||||||||||||| ||||||| |||| |||||||||     
T  2224905 ttgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcatgatggagttgttattatattaagcagttgtttggtttaa 2224806  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||| ||||||||    
T  2224805 gtttaggtttaagcttaaat 2224786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 25938427 - 25938646
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||| |||||||||| || |||| |||| ||||||||||||| |||||||||| || | ||  ||| |||||||||||||||||||||||||| |||    
T  25938427 cattaccagcactttaactataaaaaaacaaaaaaaacatcacaaatgaaataaaattacgatcccaattttttaaaattaactcataaaataatatgaa 25938526  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     ||  ||||||||||||||  ||||||| | |||||| | ||||| ||| |||||   |||||||||||||||||||||||||||||||||||||||||     
T  25938527 ccgcggtatttagtcaaatagaaaacatccgaaatatttctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttttttggtttaa 25938626  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  25938627 gtttaggtttaggcttaaat 25938646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 3387264 - 3387041
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaa----tattttaaaattaactcataaaataata 98  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||| | ||  ||    | |||| |||||||||||||||||||||    
T  3387264 cattacccgcactttaactatgaaaagacaaaaaaaacatcacaaatgaaataaaactacgatctcaaattttttttttaaattaactcataaaataata 3387165  T
Q  99 cgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggt 198  Q
     ||||||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||  ||||||||||||||||||||||||||| |||| ||||||    
T  3387164 tgaatcgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccgacatgatggagttgttattgtattaagcagttgtttggt 3387065  T
Q  199 ttaggttttagtttaggcttaaat 222  Q
    ||| ||||  ||||||||||||||    
T  3387064 ttaagtttaggtttaggcttaaat 3387041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 42053316 - 42053096
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||| ||| ||| |||| ||||| |||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||    
T  42053316 cattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatga 42053217  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    | ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||||||||||||||||||||| |||||||||    
T  42053216 accgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttgtttggttta 42053117  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||||||||    
T  42053116 agtttaggtttaggcttaaat 42053096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 54979194 - 54978975
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  54979194 cattacccgcactttaactatggaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 54979095  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| ||||    ||||||| ||||||||||||||||||||||| |||||||||     
T  54979094 ccgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacatcggcatgatgtagttgttattgtattaagtagttgtttggtttaa 54978995  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  54978994 gtttaggtttaggcttaaat 54978975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 52180826 - 52180606
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||| ||| ||| |||| ||||| |||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||    
T  52180826 cattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatga 52180727  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    | ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||| ||||||||||||||||| |||||||||    
T  52180726 accgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgatattgtattaagtagttgtttggttta 52180627  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||||||||    
T  52180626 agtttaggtttaggcttaaat 52180606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 52595607 - 52595826
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||| | |||||||||||   ||  ||| |||||||||||||||||||||||||| |||    
T  52595607 cattacccgcactttaactatgaaaaaacaaaaaaaacatcacaagtaaaataaaactacaatctcaattttttaaaattaactcataaaataatatgaa 52595706  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     ||| ||||||||||||||  |||||||   ||||||   ||||| ||| |||||   ||||||| ||||||||||||||||||||||| |||||||||     
T  52595707 ccgtggtatttagtcaaatagaaaacatctgaaatattcctaaaaaattatacaccggcatgatgaagttgttattgtattaagtagttgtttggtttaa 52595806  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  52595807 gtttaggtttaggcttaaat 52595826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 8066030 - 8066239
Alignment:
Q  13 actttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatt 112  Q
    |||||||| ||||||| |||| ||||||||||||| ||||||||||||| | |   ||| |||||||||||||||||||||||||| ||||||| |||||    
T  8066030 actttaactatgaaaaaacaaaaaaaacatcacaaatgaaataaaactacgattccaattttttaaaattaactcataaaataatatgaatcgtggtatt 8066129  T
Q  113 tagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagttt 212  Q
    |||||||||  ||||||| |||||||||  || || ||| ||||| | |||||||||||||| ||||||||||| |||| |||||| || ||||  ||||    
T  8066130 tagtcaaatagaaaacatccaaaatatccctagaaaattatacaccatcatgatggagttgtaattgtattaagcagttgtttggtgtaagtttaggttt 8066229  T
Q  213 aggcttaaat 222  Q
    || |||||||    
T  8066230 agacttaaat 8066239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 222
Target Start/End: Original strand, 652345 - 652532
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaa 134  Q
    ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||||||  |||||||| ||||  ||||||| |||    
T  652345 aaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaatcgtgatatttagtaaaatagaaaacatccaa 652444  T
Q  135 aatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    |||||   ||||| ||| |||||  ||||||||||||||||||||||||||| |||| ||||||||| ||||  ||||||||||||||    
T  652445 aatatacctaaaaaattatacaccgacatgatggagttgttattgtattaagcagttgtttggtttaagtttaggtttaggcttaaat 652532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 12185841 - 12186038
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| |||||||      ||||| ||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  12185841 cattacccgcactttaactatgaaaa------aaaaaaatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 12185934  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||| ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||   ||| |||||||||||||||||||||| |||| |||||||||     
T  12185935 tcgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcataatggagttgttattgtattaagcagttgtttggtttaa 12186034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 32655570 - 32655351
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||| ||| ||| |||| ||||| |||||||| ||||||||||||| | ||  | | |||||||||||||||||||||||||| ||    
T  32655570 cattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataaaactacgatcccatt-ttttaaaattaactcataaaataatatga 32655472  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    | ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||| ||||||||||||||||| |||||||||    
T  32655471 accgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgatattgtattaagtagttgtttggttta 32655372  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||||||||    
T  32655371 agtttaggtttaggcttaaat 32655351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 2721281 - 2721083
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| |     |||| ||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  2721281 cattacccgcactttaactatgaaaaaa-----aaaatatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 2721187  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||| ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||   ||| |||||||||||||||||||||| |||| |||||||||     
T  2721186 tcgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcataatggagttgttattgtattaagcagttgtttggtttaa 2721087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 12187833 - 12188031
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| |     |||| ||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  12187833 cattacccgcactttaactatgaaaaaa-----aaaatatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 12187927  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||| ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||   ||| |||||||||||||||||||||| |||| |||||||||     
T  12187928 tcgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcataatggagttgttattgtattaagcagttgtttggtttaa 12188027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 206
Target Start/End: Original strand, 14576881 - 14577052
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaa 134  Q
    ||||| ||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||||||| ||||||||||||||  |||||||||||    
T  14576881 aaaaatatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaatcgtggtatttagtcaaatagaaaacattcaa 14576980  T
Q  135 aatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttt 206  Q
    ||||||  ||||| ||| |||||   ||| |||||||||||||||||||||| |||| ||||||||| ||||    
T  14576981 aatatccctaaaaaattatacaccggcataatggagttgttattgtattaagcagttgtttggtttaagttt 14577052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 222
Target Start/End: Original strand, 38000690 - 38000877
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaa 134  Q
    ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||||||| || |||||||||||  ||||||| |||    
T  38000690 aaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaatcgtggtgtttagtcaaatagaaaacatccaa 38000789  T
Q  135 aatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    ||||||  ||||| ||  |||||   |||||||||||||||||||||||||  |||| ||||||||| ||||  ||||||||||||||    
T  38000790 aatatccctaaaaaatcatacaccggcatgatggagttgttattgtattaaacagttgtttggtttaagtttaggtttaggcttaaat 38000877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 54932786 - 54932574
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    ||||||||||||||| ||||||| |    ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||| | ||||||    
T  54932786 tacccgcactttaactatgaaaaaa----aaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataacatgaatcg 54932691  T
Q  106 tagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggtt 205  Q
    | ||||||  ||||||  ||||||| |||||||||  ||||| ||| |||||   ||||||| |||||||||||||||||| |||| ||||||||| |||    
T  54932690 tggtattttatcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcatgatgaagttgttattgtattaagcagttgtttggtttaagtt 54932591  T
Q  206 ttagtttaggcttaaat 222  Q
    |  ||||||| ||||||    
T  54932590 taggtttaggtttaaat 54932574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 186
Target Start/End: Original strand, 21075892 - 21076072
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| |||||||   || ||||| |||||||  |||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  21075892 cattacccgcactttaactatgaaaa---aaaaaaaatatcacaaaagaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 21075988  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaag 186  Q
    |||| ||||||||||||||  | ||||| |||||||||  ||||| ||| |||||   ||||||||||||||||||||||||||    
T  21075989 tcgtggtatttagtcaaatagataacatccaaaatatccctaaaaaattatacaccggcatgatggagttgttattgtattaag 21076072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 176
Target Start/End: Original strand, 4757194 - 4757365
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    |||||||||||||||  |||||| |||| |||| ||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||||    
T  4757194 tacccgcactttaactttgaaaaaacaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaatc 4757293  T
Q  105 gtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgtta 176  Q
    || ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||   ||||||||||||||||    
T  4757294 gtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcatgatggagttgtta 4757365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 56445211 - 56445072
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatatttt-aaaattaactcataaaataatac 99  Q
    |||||||||||||||| ||||||||||| ||||||||  || ||||||||||||||||||||| || |||| |||| ||||| |||||| |||||||||     
T  56445211 cattacccgcactttagccatgaaaagataataaaaaaacaccacaattgaaataaaactatgatccaaatttttttaaaatcaactcacaaaataatat 56445112  T
Q  100 gaatcgtagtatttagtcaaattaaaaacattcaaaatat 139  Q
    |||||||||||||||| ||||| |||||||| ||||||||    
T  56445111 gaatcgtagtatttagccaaataaaaaacatccaaaatat 56445072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 222
Target Start/End: Original strand, 23147466 - 23147686
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaa----acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||||||||||| ||||||| |||| ||||    ||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||    
T  23147466 tacccgcactttaactatgaaaaaacaaaaaaaaaaaacatcacaaatgaaataaaactacgatctcaattttttaaaattaactcataaaataatatga 23147565  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    | | | |||||||||||| |  ||||||| | ||||||   ||||| ||| |||||   ||||||| |||||||||| ||||||| |||| |||||||||    
T  23147566 accttggtatttagtcaattagaaaacatccgaaatattcctaaaaaattatacaccggcatgatgaagttgttattatattaagcagttgtttggttta 23147665  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||||||||    
T  23147666 agtttaggtttaggcttaaat 23147686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 35 - 222
Target Start/End: Complemental strand, 3094991 - 3094806
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaa 134  Q
    ||||| |||| || ||||||||||||| | ||  ||| |||||||||| |||||||||||||||  |||||||||||||||||||||  ||||||| |||    
T  3094991 aaaaaaatcataaatgaaataaaactacgatcccaattttttaaaattgactcataaaataatataaatcgtagtatttagtcaaatagaaaacatccaa 3094892  T
Q  135 aatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    |  |||  ||||| ||| ||||||  | |||||||||||||||||||||||| |||| ||||||||| ||||  ||||||| ||||||    
T  3094891 a--atccctaaaaaattatacactggcgtgatggagttgttattgtattaaggagttgtttggtttaagtttaggtttaggtttaaat 3094806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 27586629 - 27586495
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    ||||| ||||||||  ||||||||||||||||||||| |||||| || |||||||||||||||| | || |||||||||||||||| ||| || |||||     
T  27586629 tacccacactttaattatgaaaagacaataaaaacattacaatttaa-taaaactatggtcaaatttttgtaaaattaactcataagatagtatgaatct 27586531  T
Q  106 tagtatttagtc-aaattaaaaacattcaaaatatc 140  Q
    |||||||||||| |||| ||||||||||||||||||    
T  27586530 tagtatttagtcaaaataaaaaacattcaaaatatc 27586495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 22829800 - 22829927
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatc-acaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||||||| |||||| ||||||| |||||||||| | | |||||||||||||||||||| || ||| | ||| |||| |||||||||||||||| ||    
T  22829800 cattacccgcattttaactatgaaaaaacaataaaaaaacccacaattgaaataaaactatgatccaaaaaatttcaaatcaactcataaaataatatga 22829899  T
Q  102 atcgtagtatttagtcaaattaaaaaca 129  Q
    |||||||||||||| ||||| |||||||    
T  22829900 atcgtagtatttagccaaataaaaaaca 22829927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 52802313 - 52802174
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||||||    
T  52802313 cattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacga 52802214  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  52802213 attgtagtatttagccaaataaaaaaacatccaaaatatc 52802174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 53140673 - 53140812
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||||||    
T  53140673 cattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacga 53140772  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  53140773 attgtagtatttagccaaataaaaaaacatccaaaatatc 53140812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 8644270 - 8644128
Alignment:
Q  12 cactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtat 111  Q
    ||||||||  |||||||||||||||||| |||||||||||| |||||  |||||  ||| ||||| |||| ||||||||||||| |||||||||||||||    
T  8644270 cactttaattatgaaaagacaataaaaatatcacaattgaactaaaatcatggttcaaaaattttcaaatcaactcataaaatagtacgaatcgtagtat 8644171  T
Q  112 ttagtcaaattaaaaacattcaaaatatctttaaaatattgta 154  Q
    | |   |||| |||||||||||||| |||||| ||| ||||||    
T  8644170 tgaacaaaataaaaaacattcaaaacatctttcaaaaattgta 8644128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 23349445 - 23349300
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa----catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataata 98  Q
    ||||||||||| |||||| |||||| |||||||||||    || ||||||||||||||||||||| |  ||| ||||| |||| ||||||||||||| ||    
T  23349445 cattacccgcattttaactatgaaatgacaataaaaaaaaccaccacaattgaaataaaactatgattcaaaaattttcaaatcaactcataaaatagta 23349346  T
Q  99 cgaatcgtagtatttagtcaaat-taaaaacattcaaaatatcttt 143  Q
     |||||||||||||||| |||||  |||||||| ||||||||||||    
T  23349345 tgaatcgtagtatttagccaaataaaaaaacatccaaaatatcttt 23349300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 8614608 - 8614759
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||| |||||||||||| |||||||||||||||||| ||| |||||||| |||||  |||||  ||| | ||| |||| ||||||||||||| ||||||    
T  8614608 cattatccgcactttaactatgaaaagacaataaaaatatctcaattgaactaaaatcatggttcaaaaagtttcaaatcaactcataaaatagtacgaa 8614707  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgta 154  Q
    || ||||||| |   |||| |||||||||||||| |||||| ||| ||||||    
T  8614708 tcatagtattgaacaaaataaaaaacattcaaaacatcttttaaaaattgta 8614759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 51806979 - 51806854
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||  || ||||||||||||||| |||||| ||||||||||||||||| || || | ||||||||  ||||||||||||| ||  |    
T  51806979 cattacccgcactttaattataaaaagacaataaaaaacatcaccattgaaataaaactatgatccaatttttttaaaagcaactcataaaatagtagaa 51806880  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    |||||||||||||| ||||| |||||    
T  51806879 atcgtagtatttagccaaataaaaaa 51806854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 7250526 - 7250423
Alignment:
Q  119 aattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggctt 218  Q
    |||| ||||||| |||||||||| ||||| ||||||||| | |||||||||||| ||||||||||||  |  ||||||||||| ||||||||||||||||    
T  7250526 aattgaaaacatccaaaatatctctaaaaaattgtacaccagcatgatggagttattattgtattaaacatatttttggtttaagttttagtttaggctt 7250427  T
Q  219 aaat 222  Q
    ||||    
T  7250426 aaat 7250423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 22247922 - 22248062
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa--acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||| |||||||||  | |||||||||||||||||  ||||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||||     
T  22247922 cattatccgcactttctctatgaaaagacaataaaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataataca 22248021  T
Q  101 aatcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    ||| ||||||||||| |||||  |||||||| |||||||||    
T  22248022 aattgtagtatttagccaaataaaaaaacatccaaaatatc 22248062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 45097624 - 45097764
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa--acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||  | |||||||||||||||||  ||||||||||| ||||||||||||| || |||  | || |||| |||| |||||||| ||||    
T  45097624 cattacccgcactttctctatgaaaagacaataaaaaaacatcacaattaaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacg 45097723  T
Q  101 aatcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    ||| ||||||||| |||||||  |||||||| |||||||||    
T  45097724 aattgtagtatttggtcaaataaaaaaacatccaaaatatc 45097764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 31713682 - 31713571
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaacatc--acaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||| |||||  |||||||||||||||||| | |  |||||||||||||||||||| || ||| | ||| |||| |||||||||||||||| ||    
T  31713682 attacccgcattttaattatgaaaagacaataaaaaaaacccacaattgaaataaaactatgatccaaaaaatttcaaatcaactcataaaataatatga 31713583  T
Q  102 atcgtagtattt 113  Q
    ||||||||||||    
T  31713582 atcgtagtattt 31713571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 52013849 - 52013985
Alignment:
Q  5 ttacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatatttt-aaaattaactcataaaataatacgaa 102  Q
    |||||||||||||| |||| ||| || |||||||| || ||||||||||||||||||||| || || | |||| ||||| |||||| ||||||||| |||    
T  52013849 ttacccgcactttagccataaaatgataataaaaaacaccacaattgaaataaaactatgatccaattttttttaaaatcaactcacaaaataatatgaa 52013948  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatat 139  Q
    |||||||| ||||  |||| |||||||| ||||||||    
T  52013949 tcgtagtacttagctaaataaaaaacatccaaaatat 52013985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 33733439 - 33733576
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||||||||||||||||| ||||||||||||| ||||||||||  | |||  | || |||| |||| ||||||||||||||    
T  33733439 cattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaa-taaaactatgacccaaaattatttaaatcaactaataaaataatacga 33733537  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
    |||||||||||||  |||||  |||||||| ||||||||    
T  33733538 atcgtagtatttatccaaataaaaaaacatccaaaatat 33733576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 7117983 - 7117871
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||||  |||||||||| |||||| ||||||||||||| |||||||||| ||||| ||||||| |||| |||| |||| ||||||||||||| |||     
T  7117983 ctcattacttgcactttaactatgaaa-gacaataaaaacaacacaattgaactaaaattatggtccaaattttttcaaatcaactcataaaatagtaca 7117885  T
Q  101 aatcgtagtattta 114  Q
    ||| | ||||||||    
T  7117884 aattgcagtattta 7117871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 29405921 - 29405782
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaac-atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||| |||||||||  | |||||||||||| |||||  ||||||||||||||||||||||| || |||  | || |||| |||| |||||||| |||||    
T  29405921 cattatccgcactttctctatgaaaagacaaaaaaaaatatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacga 29405822  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    |||||||||||||  |||||  |||||||| |||||||||    
T  29405821 atcgtagtatttaaccaaataaaaaaacatccaaaatatc 29405782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 46080778 - 46080920
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaa--acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataata 98  Q
    |||||||||| ||||||  | |||||||||||||||||  ||||||||||||||||||||||||| |  |||  | || |||| || | |||||||| ||    
T  46080778 ctcattacccacactttctctatgaaaagacaataaaaaaacatcacaattgaaataaaactatgatataaaattatttaaatcaattgataaaatagta 46080877  T
Q  99 cgaatcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    |||||| |||||||||| |||||  |||||||| |||||||||    
T  46080878 cgaatcatagtatttagccaaataaaaaaacatccaaaatatc 46080920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 8805974 - 8805849
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| ||||| ||||| |||||||| || |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| ||    
T  8805974 cattacccgcactttagccatggaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaatcaacttaggaaataatatga 8805875  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    |||||| ||||||  ||||| |||||    
T  8805874 atcgtaatatttaaccaaataaaaaa 8805849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 9930500 - 9930638
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||| || ||||||||  || |||||||||||||| ||||||| ||||||||||||||||| || || | |||| |||  |||||||||||||  |  |    
T  9930500 cattatcctcactttaattataaaaagacaataaaaaacatcaccattgaaataaaactatgatctaattttttttaaagcaactcataaaatagcagaa 9930599  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
    ||| |||||||||| |||||  |||||||||||||||||    
T  9930600 atcttagtatttagccaaataaaaaaacattcaaaatat 9930638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 31786476 - 31786604
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacat----cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataata 98  Q
    ||||||||||| |||||| ||||||||| ||||| || |     ||||||||||||||||||||| || ||| | ||| |||| ||||||  ||||||||    
T  31786476 cattacccgcattttaactatgaaaagataataataaaaaaacccacaattgaaataaaactatgatccaaaaaatttcaaatcaactca--aaataata 31786573  T
Q  99 cgaatcgtagtatttagtcaaattaaaaaca 129  Q
     |||||||||||||||| ||||| |||||||    
T  31786574 tgaatcgtagtatttagccaaataaaaaaca 31786604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 41780740 - 41780846
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaat-taaaaacattca 133  Q
    ||||||| ||||||||||||||||| ||| || ||| | ||| |||| ||||||||||||| || ||||| |||||||||| |||||  |||||||| ||    
T  41780740 aaaaacaccacaattgaaataaaacaatgatccaaaaaatttcaaatcaactcataaaatagtatgaatcttagtatttagccaaataaaaaaacatcca 41780839  T
Q  134 aaatatc 140  Q
    |||||||    
T  41780840 aaatatc 41780846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 7262074 - 7262199
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||||||| ||||||  ||||||||||||||||| || ||||| ||||||| ||||||| || | | | ||| |||| ||||||||||||| || ||    
T  7262074 cattacccgcagtttaactctgaaaagacaataaaaagcaccacaactgaaatacaactatgatccagaaaatttcaaatcaactcataaaatagtatga 7262173  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    || ||||||||||  ||||| |||||    
T  7262174 atggtagtatttaaccaaataaaaaa 7262199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 39804332 - 39804444
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| | ||| ||||| |||||||| || |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| ||    
T  39804332 cattacccgcactttagctatggaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatga 39804431  T
Q  102 atcgtagtattta 114  Q
    |||||| ||||||    
T  39804432 atcgtaatattta 39804444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 7250566 - 7250519
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaa 53  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  7250566 tacctgcactttaactatgaaaagacaataaaaacatcacaattgaaa 7250519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 22306850 - 22306724
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaacat---cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||| |||||| ||||||||| |||||||| |    |||||||||||||||| |||| || ||| | ||| |||| ||| |||||||||||  |    
T  22306850 attacccgcattttaactatgaaaagataataaaaaaaaacccacaattgaaataaaattatgatccaaaaaatttcaaatcaacccataaaataat--g 22306753  T
Q  101 aatcgtagtatttagtcaaattaaaaaca 129  Q
    | ||||||||||||| ||||| |||||||    
T  22306752 agtcgtagtatttagccaaataaaaaaca 22306724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 24486647 - 24486750
Alignment:
Q  25 aaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaatta 123  Q
    |||||||||||||| ||||||||||||||||||||||||| |  || | |||| |||  ||||||||||||| ||  |||| |||||||||| ||||| |    
T  24486647 aaaagacaataaaaaacatcacaattgaaataaaactatgatttaattttttttaaagcaactcataaaatagtagaaatcatagtatttagccaaataa 24486746  T
Q  124 aaaa 127  Q
    ||||    
T  24486747 aaaa 24486750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 1757917 - 1757859
Alignment:
Q  164 gatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    |||| |||||||||||||||||||||||||||  ||||||||| ||||||| |||||||    
T  1757917 gatgaagttgttattgtattaagtagtttttttatttaggtttgagtttagccttaaat 1757859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 14595362 - 14595500
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaac-atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||  || ||| |||||||||||  ||||| ||||||||||||||||| || || | |||| |||  |||||||||||||  |  |    
T  14595362 cattacccgcactttaattataaaacgacaataaaaaatatcaccattgaaataaaactatgatctaattttttttaaagcaactcataaaataggagaa 14595461  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
    |||||||||||||| || ||  |||||||| ||||||||    
T  14595462 atcgtagtatttagccagataaaaaaacatccaaaatat 14595500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 21297331 - 21297273
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaata-aaaacatcacaattgaaataaaactatg 63  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| ||||    
T  21297331 tacccgcactttaactatgaaaagacaataaaaaacatcataattgaaataaaattatg 21297273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 39485183 - 39485090
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaat 94  Q
    |||| ||||||||||||  || |||||||||||||||  |||||||||||||||||||||||  || || | |||| ||| |||||||||||||    
T  39485183 cattgcccgcactttaattataaaaagacaataaaaaaacatcacaattgaaataaaactataatccaattttttttaaagtaactcataaaat 39485090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 44293016 - 44292891
Alignment:
Q  29 gacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaac 128  Q
    ||||||||| |||| |||||   |||||| |||| ||| || | ||||||||| |||| ||||||||||| |||| ||||||||||| ||||| |||||     
T  44293016 gacaataaacacattacaat---aataaagctatagtccaatttttttaaaatcaacttataaaataatatgaattgtagtatttagccaaataaaaaat 44292920  T
Q  129 attcaaaatatctttaaaatattgtacac 157  Q
    || |||||||||  ||| | |||||||||    
T  44292919 atccaaaatatccctaagaaattgtacac 44292891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 46030428 - 46030485
Alignment:
Q  164 gatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    |||| |||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  46030428 gatgaagttgttattgtattaagtagtttttt-atttaggtttgagtttaggcttaaat 46030485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 46258031 - 46257974
Alignment:
Q  164 gatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    |||| |||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  46258031 gatgaagttgttattgtattaagtagtttttt-atttaggtttgagtttaggcttaaat 46257974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 28234221 - 28234109
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| ||||| ||||| |||||||| || ||||  ||||||||||||||| || |||| |||| |||| |||| |  |||||||| ||    
T  28234221 cattacccgcactttagccatggaaagataataaaaatcaccacacctgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatga 28234122  T
Q  102 atcgtagtattta 114  Q
    || ||| ||||||    
T  28234121 attgtaatattta 28234109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 44808532 - 44808648
Alignment:
Q  11 gcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagta 110  Q
    |||||||||  || ||||||||||||||||||||||| | | |||||| |||| || |  | |||| |||  ||||||||||||| ||  ||||||||||    
T  44808532 gcactttaattataaaaagacaataaaaacatcacaacttatataaaattatgatccatttttttttaaagcaactcataaaatagtagaaatcgtagta 44808631  T
Q  111 tttagtcaaattaaaaa 127  Q
    ||||| ||||| |||||    
T  44808632 tttagccaaataaaaaa 44808648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 5798326 - 5798503
Alignment:
Q  23 tgaaaagacaataaaaacatcacaattgaaataaaactatgg-tcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaat 121  Q
    ||||||||||||||||| || ||||||||||||||| ||||| ||||||| |||| | || ||||||  ||||| || |||||||||||||||   ||||    
T  5798326 tgaaaagacaataaaaatattacaattgaaataaaattatggttcaaaat-ttttcagatcaactca-caaatagtatgaatcgtagtatttaacaaaat 5798423  T
Q  122 taaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
     |||| ||| ||||| ||| || |||  ||||| |||| || |  |||   | |||||||||||||||||||| ||||||    
T  5798424 aaaaagcatccaaaacatcctttaaaagttgtatactagcaggtgggatcgggtattgtattaagtagtttttaggttta 5798503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 46030318 - 46030380
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtc 66  Q
    ||||||||||||||| | |||||||   ||||||| ||||||||||||||||||| |||||||    
T  46030318 attacccgcactttagctatgaaaaaggaataaaagcatcacaattgaaataaaattatggtc 46030380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 50982003 - 50981909
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaa-taaaactatggtcaaaatattttaaaattaactcataaaata 95  Q
    ||||||| |||||||||| || |||||||||| ||| | ||||||||||||| |||||||||||||  ||  |||| |||| |||||||||||||    
T  50982003 cattacctgcactttaactataaaaagacaatcaaatatatcacaattgaaaataaaactatggtcccaaatttttcaaatcaactcataaaata 50981909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 26340279 - 26340154
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| ||||| ||||| ||||||||  | || | |||||||||||||||| || |||| |||| |||| |||| |  |||||||  ||    
T  26340279 cattacccgcactttagccatggaaagataataaaaattaccagacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatgtga 26340180  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    |||||| ||||||  ||||| |||||    
T  26340179 atcgtaatatttaaccaaataaaaaa 26340154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 1758028 - 1757968
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatg 63  Q
    ||||||||||||||||   |||||||   ||||||||||| ||||||||||||||||||||    
T  1758028 cattacccgcactttagttatgaaaaaggaataaaaacattacaattgaaataaaactatg 1757968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 27791079 - 27790988
Alignment:
Q  25 aaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtattta 114  Q
    |||| ||||||||||  || |||||||||||||||| |||  || | || |||| | || ||||||||||||| ||||||||||||||||||    
T  27791079 aaaaaacaataaaaaagcaccacaattgaaataaaattataatccagattttttcatatcaactcataaaatagtacgaatcgtagtattta 27790988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 9609030 - 9609169
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaa-taaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||| ||||||||| |||||||| |||||||| | ||||||||| ||| ||| ||||||||   |  ||||| |||| ||||||||||||| ||||    
T  9609030 cattacccacactttaactatgaaaaggcaataaaatatatcacaattaaaaataacactatggttccagaattttcaaataaactcataaaatagtacg 9609129  T
Q  101 aatcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
     ||| || |||||||  ||||  |||||||| ||||||||    
T  9609130 gatcataatatttagctaaataaaaaaacatccaaaatat 9609169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 38444115 - 38444164
Alignment:
Q  173 gttattgtattaagtag-ttttttggtttaggttttagtttaggcttaaa 221  Q
    |||||||||||||| |  |||||| |||||||||||||||||||||||||    
T  38444115 gttattgtattaagcatatttttttgtttaggttttagtttaggcttaaa 38444164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 2621016 - 2620797
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||    
T  2621016 cattacccgcactttaactatgaaaagataataaaaacatcacaattgaaataaaacaatggtcaaaatattttaaaattaacttataaaataatatgaa 2620917  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    | ||  ||||||||| | ||||||||||||||||||||| ||||||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||    
T  2620916 ttgtgatatttagtccatttaaaaacattcaaaatatctctaaaatattgtacaccaacaagatagagttgttattgtattaagcagttttttggtttag 2620817  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||    
T  2620816 gttttagtttaggcttaaat 2620797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 3 - 219
Target Start/End: Complemental strand, 19643569 - 19643353
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||    
T  19643569 cattacccgcactttaactatgaaaagacaataaaaacatcacaattgaaaaaaaactatggtctaaatcttttaaaattaactcataaaataatacaaa 19643470  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    | ||| |||||||||||||||||||||| |||||||||| ||||| ||||||||  | || |||| |||||||||||||||||| |||||||||||||||    
T  19643469 ttgtattatttagtcaaattaaaaacatccaaaatatctctaaaaaattgtacatcagcaggatgaagttgttattgtattaagcagttttttggtttag 19643370  T
Q  203 gttttagtttaggctta 219  Q
    |||||||||||||||||    
T  19643369 gttttagtttaggctta 19643353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 6109675 - 6109894
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| |    
T  6109675 cattacccgcactttaactatgaaaagacaataaaaatatcacaattgaaataaaactatggtctaaatcttttaaaattaacttataaaataatacgga 6109774  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    ||||||||||||||||||||||||||||| |||||||||  |||| |||||||||   || |||  |||||||||||||||||| |||| ||||||||||    
T  6109775 tcgtagtatttagtcaaattaaaaacatttaaaatatctccaaaaaattgtacaccggcaggataaagttgttattgtattaagcagttctttggtttag 6109874  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||    
T  6109875 gttttagtttaggcttaaat 6109894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 12 - 222
Target Start/End: Original strand, 30801309 - 30801519
Alignment:
Q  12 cactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtat 111  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| |||||| ||| || | |||||||||||||||||||||||||| |||| | |||||    
T  30801309 cactttaactatgaaaagacaatgaaaacatcacaattgaaatagaactatagtccaatttttttaaaattaactcataaaataatatgaattgcagtat 30801408  T
Q  112 ttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtt 211  Q
    | |||||||| ||||||||| ||||||||  ||||| |||||| ||  |||  || ||||||||||||||||||||||||||||||||||||||| | ||    
T  30801409 taagtcaaataaaaaacatttaaaatatccctaaaaaattgtataccgacagaatagagttgttattgtattaagtagttttttggtttaggtttaaatt 30801508  T
Q  212 taggcttaaat 222  Q
     ||||||||||    
T  30801509 caggcttaaat 30801519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 25419320 - 25419528
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||  |||| ||||||||||||           ||| |||    
T  25419320 cattacctgcactttaactatgaaaagaaaataaaaacatcacagttgaaataaaactatggtttaaatcttttaaaattaa-----------atatgaa 25419408  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||   || ||||||||||||||||||||||  |||||||||||||||    
T  25419409 tcgtagtatttagtcaaattaaaaacatccaaaatatctttaaaaaactgtacaccggcaggatggagttgttattgtattaaacagttttttggtttag 25419508  T
Q  203 gttttagtttaggcttaaat 222  Q
    |||||||||| || ||||||    
T  25419509 gttttagtttcggtttaaat 25419528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 26561283 - 26561082
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| || | |||  |||||||||||||||||| ||| ||    
T  26561283 cattacacgcactttaactatgaaaagacaataaaaacatcacaattgatataaaactatggtccaatttttt--aaattaactcataaaatagtacaaa 26561186  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    ||||| ||||||||||||| |||| ||| |||||||||  ||||| ||||||||   ||| ||||||| ||||||||| ||||||| ||||||| |||||    
T  26561185 tcgtaatatttagtcaaataaaaatcatccaaaatatccctaaaaaattgtacatcgacaggatggagctgttattgtgttaagtacttttttgatttag 26561086  T
Q  203 gttt 206  Q
    ||||    
T  26561085 gttt 26561082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 3616919 - 3616706
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||     ||||||||||| ||  |||  ||||||||||||||||||||||||| ||||    
T  3616919 attacccgcactttaactatgaaaaaacaaaaaaaacatcacaa-----ataaaactatgatcccaattatttaaaattaactcataaaataatatgaat 3616825  T
Q  104 cgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttagg 203  Q
    ||| ||||||||||||||  ||||||| |||||||||| ||||| ||| |||||   |||||||||| ||||||||||||||| |||| ||||||||| |    
T  3616824 cgtggtatttagtcaaatagaaaacatccaaaatatctctaaaaaattatacaccggcatgatggagctgttattgtattaagcagttgtttggtttaag 3616725  T
Q  204 ttttagtttaggcttaaat 222  Q
    |||  ||||||||||||||    
T  3616724 tttaggtttaggcttaaat 3616706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 7057658 - 7057880
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||| ||||||||||| ||||||| ||||| ||||||||| |||||||||| |||||||  |||| | ||||||||||||||||||||||| || |||    
T  7057658 cattactcgcactttaactatgaaaaaacaatgaaaacatcataattgaaatagaactatgaccaaatt-ttttaaaattaactcataaaatagtatgaa 7057756  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacac---taacatg-atggagttgttattgtattaagtagttttttggt 198  Q
    | ||||||||||||||||| || |||||| ||||||||  ||||| |||||||||    || ||| |||||| ||||||| ||||||||||||||||| |    
T  7057757 ttgtagtatttagtcaaataaataacatttaaaatatccctaaaaaattgtacaccggcaagatgcatggagatgttattctattaagtagttttttgat 7057856  T
Q  199 ttaggttttagtttaggcttaaat 222  Q
    |||||||| |||||||||||||||    
T  7057857 ttaggtttaagtttaggcttaaat 7057880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 24891473 - 24891283
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  |||| |||||||||||           |||| |||    
T  24891473 cattacccgcactttaactatgaaaagacaataaaaatatcacaattgaaataaaactatggtttaaatcttttaaaatta-----------aatatgaa 24891385  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    || ||||||||||||||||||||||||| |||||||||||||||| | | |||||   || ||||||||||||||||||||||| |||||||||||||||    
T  24891384 tcttagtatttagtcaaattaaaaacatccaaaatatctttaaaa-actttacaccggcaggatggagttgttattgtattaagcagttttttggtttag 24891286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 1376238 - 1376444
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa---acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatac 99  Q
    |||||||||||||||||| ||||||| |||| ||||   ||||||||| ||||||||||||| | ||  ||| ||||||||||||||||||||||||||     
T  1376238 cattacccgcactttaactatgaaaaaacaaaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatat 1376337  T
Q  100 gaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtt 199  Q
    ||||||| ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||   |||||||||||||||||||||||||| |||| |||| ||    
T  1376338 gaatcgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttgatt 1376437  T
Q  200 taggttt 206  Q
    || ||||    
T  1376438 taagttt 1376444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 24789565 - 24789785
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||| ||| ||| |||| |||| ||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||| | ||    
T  24789565 cattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataaaactacgatctcaattttttaaaattaactcataaaataacatga 24789664  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    | |||  |||||||||||||  ||||||| | ||||||   ||||| ||| |||||   |||||||||||||||||||||||||| |||| |||| ||||    
T  24789665 accgtgatatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttgattta 24789764  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||||||||    
T  24789765 agtttaggtttaggcttaaat 24789785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 25500199 - 25500332
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||           |||| |||    
T  25500199 cattacctgcactttaaatatgaaaagacaataaaaacatcacaattgaaataaaactatggtttaaatcttttaaaatta-----------aatatgaa 25500287  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaa 147  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||    
T  25500288 tcgtagtatttaatcaaattaaaaacatccaaaatatctttaaaa 25500332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 1667328 - 1667438
Alignment:
Q  112 ttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtt 211  Q
    |||||||||||||||| || ||||||||||  |||| | |||||||   || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1667328 ttagtcaaattaaaaaaatccaaaatatctccaaaaaaatgtacaccggcaggatggagttgttattgtattaagcagttttttggtttaggttttagtt 1667427  T
Q  212 taggcttaaat 222  Q
    |||||||||||    
T  1667428 taggcttaaat 1667438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 29528242 - 29528043
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    |||||||||| |||||| |||||||||  ||||||| |||| || |||| ||||||||||||  ||| ||||| |||| ||||||||||||| |||||||    
T  29528242 attacccgcattttaactatgaaaagatgataaaaatatcaaaactgaagtaaaactatggttcaaaaattttcaaatcaactcataaaatagtacgaat 29528143  T
Q  104 cgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttagg 203  Q
    |||| ||||||   |||| |||||||| ||||| ||| || ||| ||| || || | || || |||   |||||||||||||||||||||| ||||||||    
T  29528142 cgtattatttaacaaaataaaaaacatccaaaacatccttcaaaaattatataccagcaggagggatcggttattgtattaagtagtttttaggtttagg 29528043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 43511253 - 43511435
Alignment:
Q  11 gcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagta 110  Q
    |||||||||| |||||||||||||||||| || ||||||||||||||| ||||||  |||| |||| |||| ||||||||||||| || |  ||||||||    
T  43511253 gcactttaactatgaaaagacaataaaaatataacaattgaaataaaattatggttcaaattttttcaaatcaactcataaaatagtatggttcgtagta 43511352  T
Q  111 tttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttt 194  Q
    ||||   |||| |||||||| ||||| ||| || ||| ||||||||||| || || |||   |||||||||||| |||||||||    
T  43511353 tttaacaaaataaaaaacatccaaaacatccttcaaa-attgtacactagcaggagggatcagttattgtattacgtagttttt 43511435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 20216262 - 20216399
Alignment:
Q  5 ttacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    |||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||| || |||  | || |||| |||| |||||||| |||||||    
T  20216262 ttacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacgaat 20216361  T
Q  104 cgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    |||||||||||| |||||  |||||||| |||||||||    
T  20216362 cgtagtatttagccaaataaaaaaacatccaaaatatc 20216399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 20235860 - 20235997
Alignment:
Q  5 ttacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    |||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||| || |||  | || |||| |||| |||||||| |||||||    
T  20235860 ttacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacgaat 20235959  T
Q  104 cgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    |||||||||||| |||||  |||||||| |||||||||    
T  20235960 cgtagtatttagccaaataaaaaaacatccaaaatatc 20235997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 2472332 - 2472241
Alignment:
Q  7 acccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataata 98  Q
    ||||| |||||||| || ||||||||||||||||||||||||| ||||||||||| |||  |||| ||||||||||||||||||||||||||    
T  2472332 acccgtactttaactattaaaagacaataaaaacatcacaattaaaataaaactacggtataaatcttttaaaattaactcataaaataata 2472241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 43239233 - 43239435
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||||| |||||||||| ||||||||| |||||||| |||||||||||| ||||| ||||||  | | | ||| |||  ||||||||||||| ||||    
T  43239233 ctcattacctgcactttaactatgaaaagataataaaaatatcacaattgaactaaaattatggttcagaaaatttcaaaccaactcataaaatagtacg 43239332  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    ||| || |||||||   |||| |||||||||||||| |||||  ||| |||||| | || || || |||     |||||||||||||||||||| |||||    
T  43239333 aattgtggtatttaacaaaataaaaaacattcaaaacatcttacaaaaattgtatattagcaggagggataaactattgtattaagtagtttttaggttt 43239432  T
Q  201 agg 203  Q
    |||    
T  43239433 agg 43239435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 859555 - 859680
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatc-acaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||||||| |||||| |||||||||||| ||||| | | |||||||||||||||||||| || ||| | ||| |||| |||| ||||||||||| ||    
T  859555 cattacccgcattttaactatgaaaagacaaaaaaaaaaaccacaattgaaataaaactatgatccaaaaaatttcaaatcaacttataaaataatatga 859654  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    |||||||||||||| ||||| |||||    
T  859655 atcgtagtatttagccaaataaaaaa 859680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 222036 - 222162
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacat--cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||||||| |||||| |||||||||||| ||||| |   ||||||||||||||||||||| || ||| | ||| |||| |||| ||||||||||| |    
T  222036 cattacccgcattttaactatgaaaagacaaaaaaaaaaaaccacaattgaaataaaactatgatccaaaaaatttcaaatcaacttataaaataatatg 222135  T
Q  101 aatcgtagtatttagtcaaattaaaaa 127  Q
    ||||||||||||||| ||||| |||||    
T  222136 aatcgtagtatttagccaaataaaaaa 222162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 691191 - 691317
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacat--cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||||||| |||||| |||||||||||| ||||| |   ||||||||||||||||||||| || ||| | ||| |||| |||| ||||||||||| |    
T  691191 cattacccgcattttaactatgaaaagacaaaaaaaaaaaaccacaattgaaataaaactatgatccaaaaaatttcaaatcaacttataaaataatatg 691290  T
Q  101 aatcgtagtatttagtcaaattaaaaa 127  Q
    ||||||||||||||| ||||| |||||    
T  691291 aatcgtagtatttagccaaataaaaaa 691317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 735659 - 735785
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacat--cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||||||| |||||| |||||||||||| ||||| |   ||||||||||||||||||||| || ||| | ||| |||| |||| ||||||||||| |    
T  735659 cattacccgcattttaactatgaaaagacaaaaaaaaaaaaccacaattgaaataaaactatgatccaaaaaatttcaaatcaacttataaaataatatg 735758  T
Q  101 aatcgtagtatttagtcaaattaaaaa 127  Q
    ||||||||||||||| ||||| |||||    
T  735759 aatcgtagtatttagccaaataaaaaa 735785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 25179015 - 25178910
Alignment:
Q  2 tcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||| |||||| | ||||  |||||||||| ||||| |||||||||||||||||||  ||| | ||| |||| |||||||||||||| | ||    
T  25179015 tcattacccgcattttaactaagaaacaacaataaaaatatcaccattgaaataaaactatggttcaaaaaatttcaaatcaactcataaaataaaatga 25178916  T
Q  102 atcgta 107  Q
    ||||||    
T  25178915 atcgta 25178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 9177048 - 9176934
Alignment:
Q  89 taaaataatacgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagta 188  Q
    ||||||| |||||||| ||||||  |  ||||| |||||||||||||||||| |||||| ||||||| |||| | || ||||   |||||||||||||||    
T  9177048 taaaatagtacgaatcctagtatggacccaaat-aaaaacattcaaaatatccttaaaaaattgtaccctaataggagggagcgattattgtattaagta 9176950  T
Q  189 gttttttggtttaggt 204  Q
    |||||| |||||||||    
T  9176949 gtttttaggtttaggt 9176934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 38551621 - 38551743
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    ||||||||||||| ||||| ||||| |||||||| || |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| |||||    
T  38551621 tacccgcactttagccatggaaagataataaaaatcaccacatttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatgaatc 38551720  T
Q  105 gtagtatttagtcaaattaaaaa 127  Q
    ||| ||||||  ||||| |||||    
T  38551721 gtaatatttaaccaaataaaaaa 38551743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 7580121 - 7580213
Alignment:
Q  17 taaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgta 107  Q
    |||| ||||||||||||||||||  ||||||||||||||||||| |||| || ||| | ||| |||| ||||||||||||| | |||||||||    
T  7580121 taactatgaaaagacaataaaaaagcatcacaattgaaataaaaatatgatccaaaaaatttcaaatcaactcataaaatagtgcgaatcgta 7580213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 33212342 - 33212462
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa--tcgtagtatttagtcaaattaaaaacattc 132  Q
    ||||||||||||||||||||||||| ||| || || | |||| | || |||  |||||||||||||||  | ||||||||||| ||||| |||||||| |    
T  33212342 aaaaacatcacaattgaaataaaaccatgatctaatttttttcatatcaacatataaaataatacgaatgtagtagtatttagccaaataaaaaacatcc 33212441  T
Q  133 aaaatatctttaaaatattgt 153  Q
    ||||| ||| ||||| |||||    
T  33212442 aaaatgtctctaaaaaattgt 33212462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 39221618 - 39221561
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaata-aaaacatcacaattgaaataaaac 59  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  39221618 cattacccgcactttaaccatgaaaagacaataaaaaacaccacaattgaaattaaac 39221561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 45553120 - 45553181
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatgg 64  Q
    ||||||| ||| |||||| |||||||||||| || |||||||||||||||||||||||||||    
T  45553120 cattacctgcattttaactatgaaaagacaaaaagaacatcacaattgaaataaaactatgg 45553181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 15542187 - 15542326
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa--acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||| |||||||||  || ||||| ||||||||  ||||||||||| ||||||||||| | || || | ||||||||  ||||||||||||| ||      
T  15542187 cattacctgcactttaattataaaaaggcaataaaaaaacatcacaattaaaataaaactaagatccaatttttttaaaagcaactcataaaatagtaga 15542286  T
Q  101 aatcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
    ||| ||||||||||| ||| | ||||||||| ||||||||    
T  15542287 aattgtagtatttagccaagtataaaaacatccaaaatat 15542326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 157
Target Start/End: Complemental strand, 42987784 - 42987652
Alignment:
Q  25 aaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaa 124  Q
    |||||||| ||| ||||| ||||  ||||||||||||||||  |||  |||| |||| |||| |||||||| |||| ||| || |||||||  |||| ||    
T  42987784 aaaagacattaagaacattacaacggaaataaaactatggttcaaaagtttttaaatcaactaataaaatagtacggatcataatatttagctaaataaa 42987685  T
Q  125 aaacattcaaaatatctttaaaatattgtacac 157  Q
    ||||||  |||||||| |||||| |||||||||    
T  42987684 aaacatctaaaatatccttaaaaaattgtacac 42987652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 38020101 - 38020213
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||||||||| ||||||  |||||||||||||||||  || ||||| ||||||| ||||||  || | | | ||| |||| ||||||||||||| || |    
T  38020101 cattacccgcagtttaactctgaaaagacaataaaaaagcaccacaactgaaatacaactattatccagaaaatttcaaatcaactcataaaatagtatg 38020200  T
Q  101 aatcgtagtattt 113  Q
    ||| |||||||||    
T  38020201 aatggtagtattt 38020213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 15961727 - 15961668
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaacta 61  Q
    ||||||||||| |||||  || ||||||||||||||| |||||||||| |||||||||||    
T  15961727 cattacccgcattttaattataaaaagacaataaaaaacatcacaattaaaataaaacta 15961668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 8e-76; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 7 - 222
Target Start/End: Original strand, 6938105 - 6938320
Alignment:
Q  7 acccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgt 106  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    |||||||||||||||||||||||||||||||||||||||    
T  6938105 acccgcactttaactatgaaaagacaataaaaacatcacaattgaaacaaaactatgacataaatattttaaaattaactcataaaataatacgaatcgt 6938204  T
Q  107 agtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttt 206  Q
    |||||||||| ||||||||||||| ||||||| || ||||| |||||||||    | |||| |||||||||||||||||| |||||||||||||||||||    
T  6938205 agtatttagtaaaattaaaaacatccaaaatacctctaaaaaattgtacaccggtaggatgtagttgttattgtattaagcagttttttggtttaggttt 6938304  T
Q  207 tagtttaggcttaaat 222  Q
    ||||||||||||||||    
T  6938305 tagtttaggcttaaat 6938320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 12429481 - 12429683
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||| | |||||||||||     
T  12429481 ctcattacccgcactttaactatgaaaagacaataaaaacatcacaattgaaataaaattatggtctaaatcttttaaaattaacccgtaaaataataca 12429580  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||| |||| ||||||  |||||||||||||||||  |||||||||||||    
T  12429581 aatcgtagtatttagtcaaactaaaaacatccaaaatatctttaaaaaattgtaaactagcatgataaagttgttattgtattaaagagttttttggttt 12429680  T
Q  201 agg 203  Q
    |||    
T  12429681 agg 12429683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 36 - 222
Target Start/End: Original strand, 7807848 - 7808034
Alignment:
Q  36 aaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaaa 135  Q
    ||||||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7807848 aaaacatcacaattgaaataaaattatgatcaaaatcttttaaaattaactaataaaataatacgaatcgtagtatttagtcaaattaaaaacatccaaa 7807947  T
Q  136 atatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    |||||| ||||| |||||||||   ||  |||||||||||| | || |||  ||||| |||||||||||||||||||||||||||||    
T  7807948 atatctctaaaaaattgtacaccggcagaatggagttgttactatagtaaacagtttattggtttaggttttagtttaggcttaaat 7808034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 20691639 - 20691419
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||| ||||||| |||| ||||| |||||||| ||||||||||||| | ||  ||| ||| |||||||||||||||||||||| ||    
T  20691639 cattacccgcactttaactatgaaaaaacaaaaaaaaacatcacaaatgaaataaaactacgatcccaatttttcaaaattaactcataaaataatatga 20691540  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    |||||  |||||||||||||  ||||||| |||||||||  ||||| ||| ||||| |||||||||||||||||||||||||||| |||| | |||||||    
T  20691539 atcgttatatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacacgaacatgatggagttgttattgtattaagcagttgtatggttta 20691440  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||||||||    
T  20691439 agtttaggtttaggcttaaat 20691419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 33328646 - 33328867
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |    
T  33328646 ctcattacccgcactttaactatggaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcctaattttttaaaattaactcataaaataatatg 33328745  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    ||   | ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||||||||||||||||||||| ||||||||    
T  33328746 aactatggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttgtttggttt 33328845  T
Q  201 aggttttagtttaggcttaaat 222  Q
    | ||||  ||||||||||||||    
T  33328846 aagtttaggtttaggcttaaat 33328867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 33331658 - 33331879
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |    
T  33331658 ctcattacccgcactttaactatggaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatg 33331757  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    ||   | ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||||||||||||||||||||| ||||||||    
T  33331758 aactatggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttgtttggttt 33331857  T
Q  201 aggttttagtttaggcttaaat 222  Q
    | ||||  ||||||||||||||    
T  33331858 aagtttaggtttaggcttaaat 33331879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 31784033 - 31783815
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    ||||||||||||||| ||||||| |||| |||||  |||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||||    
T  31784033 tacccgcactttaactatgaaaaaacaaaaaaaaaacatcacaaatgaaataaaactacgatctcaattttttaaaattaactcataaaataatatgaat 31783934  T
Q  104 cgtagtatttagtcaaattaaaaacattcaaaatat-ctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    ||| ||||||||||||||  ||||||| |||||||| | | |||| ||| |||||   |||||||||||||||||||||||||| |||| |||||||||     
T  31783933 cgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttggtttaa 31783834  T
Q  203 gttttagtttaggcttaaa 221  Q
    ||||  |||||||||||||    
T  31783833 gtttaggtttaggcttaaa 31783815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 29641513 - 29641330
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaa---aacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||||||||||| ||||||| |||| |||   |||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  29641513 tacccgcactttaactatgaaaaaacaaaaaacaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 29641414  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaag 186  Q
    |||| |||||||||||||| |||||||| |||||||||  ||||| ||| |||||   ||||||||||||||||||||||||||    
T  29641413 tcgtggtatttagtcaaataaaaaacatccaaaatatccctaaaaaattatacaccgtcatgatggagttgttattgtattaag 29641330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 13534242 - 13534018
Alignment:
Q  3 cattacccgcactttaaccatgaaaagac-----aataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataat 97  Q
    |||||||||||||||||| ||| ||| ||     || ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||    
T  13534242 cattacccgcactttaactatggaaaaacaaaaaaaaaaaaacatcacaaatgaaataaaactaagatcccaattttttaaaattaactcataaaataat 13534143  T
Q  98 acgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttgg 197  Q
    | ||| ||| ||||||||||||||  ||||||| | ||||||   ||||| ||||||||    ||||||||||||||||||||||||||||||| |||||    
T  13534142 atgaaccgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattgtacatcggcatgatggagttgttattgtattaagtagttgtttgg 13534043  T
Q  198 tttaggttttagtttaggcttaaat 222  Q
    |||| ||||  ||||||||||||||    
T  13534042 tttaagtttaggtttaggcttaaat 13534018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 186
Target Start/End: Complemental strand, 31511691 - 31511509
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    ||||||||||||||| ||||||| |||| |||||  |||||||| ||||||||||||| | ||  ||| |||| ||||||||||||||||||||| ||||    
T  31511691 tacccgcactttaactatgaaaaaacaaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttgaaattaactcataaaataatatgaat 31511592  T
Q  104 cgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaag 186  Q
    ||| ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||  |||||||||||||||||||||||||||    
T  31511591 cgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccgacatgatggagttgttattgtattaag 31511509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 1329612 - 1329391
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa--acatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||| ||||||| |||| | ||  | || |||| | ||||||||||| | ||  | | |||||||||||||||||||||||||| |    
T  1329612 cattacccgcactttaactatgaaaaaacaaaacaacaaaattacaaattaaataaaactacgatcccagttttttaaaattaactcataaaataatatg 1329513  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    ||| || ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||  ||||||||||||||||||||||||||  |||| ||||||||    
T  1329512 aattgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccgacatgatggagttgttattgtattaaacagttgtttggttt 1329413  T
Q  201 aggttttagtttaggcttaaat 222  Q
    | ||||  ||||||||||||||    
T  1329412 aagtttaggtttaggcttaaat 1329391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 31070856 - 31071057
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggt-caaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||| ||||||| |||| |||||||||| || ||||||||||| | | | | || | |||||||||||||||  ||||||||| ||    
T  31070856 cattacccgcactttaactatgaaaaaacaa-aaaaacatcataaatgaaataaaaccacgatcctaatttttttaaaattaactc--aaaataatatga 31070952  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    ||||| ||||||||||||||  ||||||| |||||||||| ||||| ||| ||||||  |||||||||||||||||| ||||||| |||| |||||||||    
T  31070953 atcgtggtatttagtcaaatagaaaacatccaaaatatctctaaaaaattatacactggcatgatggagttgttattttattaagcagttgtttggttta 31071052  T
Q  202 ggttt 206  Q
     ||||    
T  31071053 agttt 31071057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 206
Target Start/End: Complemental strand, 31556000 - 31555804
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcg 105  Q
    |||||||||||||| ||| |||| |||||||||| ||||||||||||||||| |||||||  ||| | ||| ||||   || |||||||| |||||||||    
T  31556000 tacccgcactttaaacataaaaa-acaataaaaatatcacaattgaaataaacctatggtttaaaaaatttcaaat---cttataaaatagtacgaatcg 31555905  T
Q  106 tagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggtt 205  Q
    |||||||||   |||| ||||||||  |||| |||||| ||| |||||| || | || ||  || |||||||||||||||||||||||| ||||||||||    
T  31555904 tagtatttaacaaaataaaaaacatctaaaacatctttcaaaaattgtataccagcaagagagatttgttattgtattaagtagtttttaggtttaggtt 31555805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 24447175 - 24447036
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||||||    
T  24447175 cattacccgcactttctctatgaaaagacaataaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacga 24447076  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  24447075 attgtagtatttagccaaataaaaaaacatccaaaatatc 24447036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 1221764 - 1221625
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaac-atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | ||||||||||||||||||  ||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||||||    
T  1221764 cattacccgcactttctctatgaaaagacaataaaaaatatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacga 1221665  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  1221664 attgtagtatttagccaaataaaaaaacatccaaaatatc 1221625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 33960185 - 33960065
Alignment:
Q  22 atgaaaagacaat-aaaaacatcacaattgaaataaaactatggt-caaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaa 119  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | ||||||  |||||| | |||| |||||||| ||||||||||||||||||| |||    
T  33960185 atgaaaagacaatgaaaaacatcacaattgaaataaaactatgattcaaaattatttaaa-tcaactaataaaatagtacgaatcgtagtatttagccaa 33960087  T
Q  120 at-taaaaacattcaaaatatc 140  Q
    ||  |||||||| |||||||||    
T  33960086 ataaaaaaacatccaaaatatc 33960065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 6799486 - 6799364
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    ||||||||||||| ||||| ||||| |||||||| || |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| |||||    
T  6799486 tacccgcactttagccatggaaagataataaaaaacaccacacttgaaataaaactatgatctaaatttttttaaatcaacttacgaaataatatgaatc 6799387  T
Q  105 gtagtatttagtcaaattaaaaa 127  Q
    ||| ||||||  ||||| |||||    
T  6799386 gtaatatttaaccaaataaaaaa 6799364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 10499227 - 10499432
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatca--caattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||| ||||||||||| |||||||||||||||||| ||    || |||||||||||| ||| || ||| |  || |||| || ||||||||||  | |    
T  10499227 cattacacgcactttaactatgaaaagacaataaaaaaatattgcagttgaaataaaaccatgatccaaaaaaattcaaatcaattcataaaatagcatg 10499326  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    |||| ||  ||||||  |||| |||| |||  ||||||||  ||||| ||||||||| ||||  | ||||| |||| ||||||||| ||||||| |||||    
T  10499327 aatcctaacatttagcaaaataaaaagcatcaaaaatatccctaaaaaattgtacaccaacagaaaggagtagttactgtattaagcagtttttaggttt 10499426  T
Q  201 aggttt 206  Q
    ||||||    
T  10499427 aggttt 10499432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 9062196 - 9062071
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| ||||| ||||| |||||||| || ||||  |||||||||| |||| || |||| |||| |||| |||| | ||||||||| ||    
T  9062196 cattacccgcactttagccatggaaagataataaaaatcaccacacatgaaataaaattatgatccaaatttttttaaatcaacttacaaaataatatga 9062097  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    |||||| ||||||  ||||| |||||    
T  9062096 atcgtaatatttaaccaaataaaaaa 9062071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 6337294 - 6337353
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatg 63  Q
    ||||||| ||||||| | |||||||   ||||||||||||||||||||||||||||||||    
T  6337294 attacccacactttagctatgaaaaaggaataaaaacatcacaattgaaataaaactatg 6337353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 28769938 - 28770001
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtc 66  Q
    |||||||||||||||| | |||||||   |||||||| || |||||||||||||||||||||||    
T  28769938 cattacccgcactttagctatgaaaaaggaataaaaaaattacaattgaaataaaactatggtc 28770001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 6337985 - 6337860
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||| |||||   |||||||||||||||||  || ||||| ||||||| || |||| || | | | ||| |||| ||||||||||||| || ||    
T  6337985 attacccgcagtttaatactgaaaagacaataaaaaagcaccacaactgaaatacaattatgatccagaaaatttcaaatcaactcataaaatagtatga 6337886  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    || ||||||||||  ||||| |||||    
T  6337885 atggtagtatttaaccaaataaaaaa 6337860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 28770049 - 28770091
Alignment:
Q  164 gatggagttgttattgtattaagtagttttttggtttaggttt 206  Q
    |||| |||||||||||||||||||||||||||  |||||||||    
T  28770049 gatgaagttgttattgtattaagtagtttttttatttaggttt 28770091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 668026 - 667807
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| |||    
T  668026 cattatccgcactttaactatgaaaagacaataaaaatatcacaattgaaataaaactatggtctacatcttttaaaattaactcataaaataatatgaa 667927  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||| ||||||||||||||| |||||||||| | ||| |||||||||   || ||||||||| ||||||||||||| | |||| || ||||     
T  667926 tcgtagtatttaatcaaattaaaaacatccaaaatatctcttaaaaattgtacaccggcaagatggagtttttattgtattaagcaattttctgatttat 667827  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||||||||||||||||||    
T  667826 gttttagtttaggcttaaat 667807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 4592249 - 4592029
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||  |||| ||||  |||||||||||||||||||||| ||||||    
T  4592249 cattacccgcactttaactatgaaaagaaaataaaaatatcacaattgaaataaaactgaggtccaaattgtttaaaattaactcataaaatagtacgaa 4592150  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgat-ggagttgttattgtattaagtagttttttggttta 201  Q
    ||||| ||||||||||||| |||||||| |||||||||  ||||| |||||||||   |||||| |||||||||||||||||||||||||||||||||||    
T  4592149 tcgtactatttagtcaaataaaaaacatccaaaatatccctaaaaaattgtacaccggcatgatgggagttgttattgtattaagtagttttttggttta 4592050  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||||||||    
T  4592049 agtttaggtttaggcttaaat 4592029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 15150262 - 15150071
Alignment:
Q  23 tgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaatt 122  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  15150262 tgaaaagacgataaaaacatcacaattgaaataaaattatggtctaaatcttttaaaattaactcataaaataatatgaatcgtaaaatttagtcaaatt 15150163  T
Q  123 aaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttag 214  Q
    ||||||||||||||||||| || || |||||||||  ||| |||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  15150162 aaaaacattcaaaatatctctacaaaattgtacaccgacaggatgaagttgttattgtattaagcagatttttggtttaggttttagtttag 15150071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 29155365 - 29155589
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga- 101  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || | |||| |||||||||||||||||| || ||     
T  29155365 cattacccgcactttaactatgaaaagacattaaaaacatcacaattgaaataaaactatggtccaattttttttaaattaactcataaaatagtatgaa 29155464  T
Q  102 ----atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttgg 197  Q
        |||||||||||||||||||| |||||||| |||||||||  ||||| ||| |||||   || |||||||  ||||||||| |||||||||||||||    
T  29155465 ttcgatcgtagtatttagtcaaataaaaaacatccaaaatatccctaaaaaattttacacaggcaggatggagccgttattgtagtaagtagttttttgg 29155564  T
Q  198 tttaggttttagtttaggcttaaat 222  Q
    |||||||||  ||||||||||||||    
T  29155565 tttaggtttaggtttaggcttaaat 29155589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 13142627 - 13142408
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  13142627 cattacccgcactttaactatggaaaaacaaaaaaaacatcacaaatgaaataaaactacgatctcaattttttaaaattaactcataaaataatatgaa 13142528  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||||||||||||||||||||| |||||||||     
T  13142527 ccgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttgtttggtttaa 13142428  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  13142427 gtttaggtttaggcttaaat 13142408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 32422796 - 32422577
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  32422796 cattacccgcactttaactatggaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 32422697  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||||||||||||||||||||| |||| ||||     
T  32422696 ccgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttgtttgatttaa 32422597  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  32422596 gtttaggtttaggcttaaat 32422577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 33867601 - 33867381
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||| ||| ||| |||| ||||| |||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||    
T  33867601 cattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatga 33867502  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    | ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||||||||||||||||||||| |||||||||    
T  33867501 accgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagtagttgtttggttta 33867402  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||||||||    
T  33867401 agtttaggtttaggcttaaat 33867381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 30241478 - 30241697
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||||||| |||| || |||||||||| | |||||||| || | ||  ||| |||||||||||||||||||||||||| |||    
T  30241478 cattacccgcactttaactatgaaaaaacaaaaagaacatcacaaataaaataaaattacgatcccaattttttaaaattaactcataaaataatatgaa 30241577  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||||||||||  ||||||| |||||||||  ||||  ||| |||||   || |||||| |||||||||||||||| |||| |||||||||     
T  30241578 tcgtagtatttagtcaaatagaaaacatccaaaatatccctaaacaattatacacaggcacgatggaattgttattgtattaagcagttgtttggtttaa 30241677  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  30241678 gtttaggtttaggcttaaat 30241697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 9205227 - 9205443
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||| ||||| |||||| |||||||   || ||||||||||||| ||||||||||||| | ||  ||| |||| ||| ||||||||||||||||| |||    
T  9205227 cattatccgcattttaactatgaaaa---aaaaaaaacatcacaaatgaaataaaactacgatcccaattttttcaaactaactcataaaataatatgaa 9205323  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||| ||||||||||||||  ||||||| |||||||||  ||||| ||| ||||| |||||||||||||||||||||||||||| | || |||||||||     
T  9205324 tcgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccaacatgatggagttgttattgtattaagaaattgtttggtttaa 9205423  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||||||||||||    
T  9205424 gtttaggtttaggcttaaat 9205443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 38620441 - 38620660
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||||||||||||| ||| ||| |||| ||||||||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| |||    
T  38620441 cattacccgcactttaactatggaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaa 38620540  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     ||| ||||||||||||||  |||| || | ||||||   ||||| ||| |||||   ||||||| ||||||||||||||||||||||| |||||||||     
T  38620541 ccgtggtatttagtcaaatagaaaatatccgaaatattcctaaaaaattatacaccggcatgatgaagttgttattgtattaagtagttgtttggtttaa 38620640  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||| ||||||||    
T  38620641 gtttaggtttaagcttaaat 38620660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 25424803 - 25425022
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||| ||| ||| |||| ||||| |||||||| ||||||||||||| | ||  | | |||||||||||||||||||||||||| ||    
T  25424803 cattacccgcactttaactatggaaaaacaaaaaaaaacatcacaaatgaaataaaactacgatcccatt-ttttaaaattaactcataaaataatatga 25424901  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttta 201  Q
    | ||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   ||||||||||||| ||||||||||||||||| |||||||||    
T  25424902 accgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgatattgtattaagtagttgtttggttta 25425001  T
Q  202 ggttttagtttaggcttaaat 222  Q
     ||||  ||||||||||||||    
T  25425002 agtttaggtttaggcttaaat 25425022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 222
Target Start/End: Original strand, 20937095 - 20937312
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||  ||| || | ||||||||||||||||  || || | | |||    
T  20937095 attacccacactttaattatgaaaagacaataaaaacatcacaattgaaataaaactaccgtccaatttttttaaaattaactca--aagtagttccaat 20937192  T
Q  104 cgtagtatttagtcaaattaaaaacattcaaaata-tctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
     |||||||||||| |||| |||||||| ||||| | || |||||| | ||||||    || ||||||||||||||||||||||||||| ||||||||||     
T  20937193 agtagtatttagtgaaataaaaaacatccaaaaaaatccttaaaaaagtgtacaacggcacgatggagttgttattgtattaagtagtattttggtttaa 20937292  T
Q  203 gttttagtttaggcttaaat 222  Q
    ||||  ||||| ||||||||    
T  20937293 gtttaggtttacgcttaaat 20937312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 206
Target Start/End: Complemental strand, 44070470 - 44070268
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    ||||||||||||||| ||| ||| |||| |||||  |||||||| ||||||||||||| | ||  ||| ||||||||||||||||||||||||||  ||     
T  44070470 tacccgcactttaactatggaaaaacaaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatataaac 44070371  T
Q  104 cgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttagg 203  Q
    ||| ||||||||||||||  ||||||| |||||||||  ||||| ||| |||||   ||||||||||||||| |||||||||| |||| ||||||||| |    
T  44070370 cgtggtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacaccggcatgatggagttgttgttgtattaagcagttgtttggtttaag 44070271  T
Q  204 ttt 206  Q
    |||    
T  44070270 ttt 44070268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 31440691 - 31440472
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatatttta----aaattaactcataaaataata 98  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||| | ||  ||| ||||     |||||||||||||||||||||    
T  31440691 cattacccgcactttaactatgaaaaaacaaaaaaaacatcacaaatgaaataaaactacgatcctaatttttttttttaaattaactcataaaataata 31440592  T
Q  99 cgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggt 198  Q
     ||||||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   |||||||||||||||||||||||||| ||    |||||    
T  31440591 tgaatcgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagcag----ttggt 31440496  T
Q  199 ttaggttttagtttaggcttaaat 222  Q
    ||| ||||  ||||||||||||||    
T  31440495 ttaagtttaggtttaggcttaaat 31440472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 23231780 - 23232004
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatatttta---aaattaactcataaaataat 97  Q
    |||||||||||||||||| ||||||| | || |||||  |||||||| ||||||||||||| | ||  ||| ||||    ||||||||||||||||||||    
T  23231780 cattacccgcactttaactatgaaaaaataaaaaaaaaacatcacaaatgaaataaaactacgatcccaattttttttttaaattaactcataaaataat 23231879  T
Q  98 acgaatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttgg 197  Q
    | ||||||| ||||||||||||||  ||||||| | ||||||   ||||| ||| |||||   |||| |||||||||||||||| ||||||||| |||||    
T  23231880 aagaatcgtggtatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgttggagttgttattgtaataagtagttgtttgg 23231979  T
Q  198 tttaggttttagtttaggcttaaat 222  Q
    |||| ||||  ||||||||||||||    
T  23231980 tttaagtttaggtttaggcttaaat 23232004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 4481105 - 4481326
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacat--cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||| ||| ||| |||| ||||| ||  ||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||| | |    
T  4481105 cattacccgcactttaactatggaaaaacaaaaaaaaaatatcacaaatgaaataaaactacgatctcaattttttaaaattaactcataaaataacatg 4481204  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggttt 200  Q
    || |||  |||||||||||||  ||||||| | ||||||   ||||| ||| |||||   |||||||||||||||||||||||||| |  | ||||||||    
T  4481205 aaccgtgatatttagtcaaatagaaaacatccgaaatattcctaaaaaattatacaccggcatgatggagttgttattgtattaagcaagtgtttggttt 4481304  T
Q  201 aggttttagtttaggcttaaat 222  Q
    | ||||  ||||||||||||||    
T  4481305 aagtttaggtttaggcttaaat 4481326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 12757813 - 12757948
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||| ||| | |||| |||| | ||||||||||| || |    
T  12757813 ctcattacccgcactttaattatgaaaagacaataaaaatatcacaaatgaaataaaactatggttaaatttttttcaaatcagctcataaaatagtaag 12757912  T
Q  101 aatcgtagtatttagtcaaattaaaaacattcaaaa 136  Q
    ||||||||||||||   |||| |||||||| |||||    
T  12757913 aatcgtagtatttaacaaaataaaaaacatccaaaa 12757948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 222
Target Start/End: Complemental strand, 38958725 - 38958530
Alignment:
Q  14 ctttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtattt 113  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||| |||| |||| |||||||| ||||||||||||            ||||||||    
T  38958725 ctttaactatgaaaagacaataaaaacatcacaattaaaataaaactacggtccaaattttttaaaa-taactcataaaa------------tagtattt 38958639  T
Q  114 agtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagttta 213  Q
    |||||||| |||||||| ||||||||| |||||| | | |||||   |||||||  | | ||||||||||||||| ||||||||| | |||||  |||||    
T  38958638 agtcaaataaaaaacatccaaaatatccttaaaaaactatacaccggcatgatgaggctcttattgtattaagtaattttttggtcttggtttaggttta 38958539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 16711398 - 16711198
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||| |||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||||  ||  |||| |||| ||||| |||||||   ||||    
T  16711398 cattatccgctctttaaatatgaaaagacaataaaaacatcataattgaaataaaactatggtcccaaagttttcaaatcaactcgtaaaata--gcgaa 16711301  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    | |||||||  |  |||| ||||||||| |||||||||  ||||| |||||||||||||| || |  |  ||||||||||||| |||||||| |||||||    
T  16711300 ttgtagtatgcacccaaa-taaaaacatccaaaatatccctaaaaaattgtacactaacaggaggtggcggttattgtattaaatagtttttaggtttag 16711202  T
Q  203 gttt 206  Q
    ||||    
T  16711201 gttt 16711198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 4289689 - 4289828
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaac-atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | ||||||||||||||||||  ||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||||||    
T  4289689 cattacccgcactttctctatgaaaagacaataaaaaatatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacga 4289788  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  4289789 attgtagtatttagccaaataaaaaaacatccaaaatatc 4289828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 10391681 - 10391561
Alignment:
Q  22 atgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaa 120  Q
    |||||||||||||||||| |||||||||||||||||||||| | || |||  | || |||| |||| ||||||||||| |||||||||||||||||||||    
T  10391681 atgaaaagacaataaaaaacatcacaattgaaataaaactaggatccaaaattatttaaatcaactaataaaataatatgaatcgtagtatttagtcaaa 10391582  T
Q  121 t-taaaaacattcaaaatatc 140  Q
    |  |||||||| |||||||||    
T  10391581 taaaaaaacatccaaaatatc 10391561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 29546151 - 29546022
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacat---cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatac 99  Q
    ||||||||||| |||||| |||||||||||||||||| |    ||| ||||||||||||||||| || ||| | ||| |||| ||||||||| ||||||     
T  29546151 cattacccgcattttaactatgaaaagacaataaaaaaaaaaccacgattgaaataaaactatgatccaaaaagtttcaaatcaactcataacataatat 29546052  T
Q  100 gaatcgtagtatttagtcaaattaaaaaca 129  Q
    |||||||||||||||| ||||| |||||||    
T  29546051 gaatcgtagtatttagccaaataaaaaaca 29546022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 2656847 - 2656984
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||| ||||||||||||| ||||||||||||||| || || ||||||||||||| |||| || ||| | ||| |||| |||| |||||||| || ||    
T  2656847 cattacctgcactttaaccatcaaaagacaataaaaaacaccataattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtatga 2656946  T
Q  102 atcgtagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    |||||||||||||| |||| |||||| || |||||||||    
T  2656947 atcgtagtatttagccaaa-taaaaaaatccaaaatatc 2656984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 18974752 - 18974866
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatc--acaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||| ||||| |||||  |||||||||||||||||| | |  |||||||||||||||||||| || ||| | ||| |||| |||||||||||||||| |    
T  18974752 cattatccgcattttaattatgaaaagacaataaaaaaaacccacaattgaaataaaactatgatccaaaaaatttcaaatcaactcataaaataatatg 18974851  T
Q  101 aatcgtagtatttag 115  Q
    |||| ||||||||||    
T  18974852 aatcatagtatttag 18974866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 3329240 - 3329336
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataata 98  Q
    |||||||| ||||||||| ||||||| | || ||||| ||| |||| ||||||||||||||| ||  ||| ||||||||||||||||||||||||||    
T  3329240 cattacccacactttaactatgaaaaaaaaaaaaaaaacattacaaatgaaataaaactatgatcccaattttttaaaattaactcataaaataata 3329336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 17154190 - 17154118
Alignment:
Q  15 tttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactc 87  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||  ||| |||| ||||| |||||    
T  17154190 tttaactatgaaaagacaataaaaatatcacaattgaaataaaactatggttcaaaaatttcaaaatcaactc 17154118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 17961386 - 17961290
Alignment:
Q  126 aacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    ||||| |||||||||  ||||| ||| |||||   |||||||||||||||||||||||||| |||| ||||||||| ||||  ||||||||||||||    
T  17961386 aacatccaaaatatccctaaaaaattatacaccggcatgatggagttgttattgtattaagcagttgtttggtttaagtttaggtttaggcttaaat 17961290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 15234362 - 15234475
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaat 103  Q
    ||||||||||||| | ||||||||| ||||||||  |||||||||||||| ||||||||| || |||  | || |||| ||||| ||||||  ||| |||    
T  15234362 tacccgcactttatctatgaaaagaaaataaaaaatcatcacaattgaaacaaaactatgatccaaaattattcaaatcaactcttaaaatcgtacaaat 15234461  T
Q  104 cgtagtatttagtc 117  Q
    ||||||||||||||    
T  15234462 cgtagtatttagtc 15234475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 3329371 - 3329432
Alignment:
Q  161 catgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    |||||||||||||||||||||||||| |||| ||||||||| ||||  ||||||||||||||    
T  3329371 catgatggagttgttattgtattaagcagttgtttggtttaagtttaggtttaggcttaaat 3329432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 35048672 - 35048797
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| ||||| ||||| |||||||| || |||| |||||||||||||| | || |||| |||| |||| |||| |  |||||||| ||    
T  35048672 cattacccgcactttagccatggaaagataataaaaatcaccacacttgaaataaaactacgatccaaatttttttaaatcaacttacgaaataatatga 35048771  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    |||||| ||||||  ||||| |||||    
T  35048772 atcgtaatatttaaccaaataaaaaa 35048797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 42969073 - 42969198
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||| | ||| ||||| |||||||| ||||||| |||||||||||||||| || |||| |||||||   |||| |  |||||||| ||    
T  42969073 cattacccgcactttagcgatggaaagataataaaaatcatcacacttgaaataaaactatgatccaaattttttaaatcaaacttacgaaataatatga 42969172  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    |||||| ||||||  ||||| |||||    
T  42969173 atcgtaatatttaaccaaataaaaaa 42969198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 12345593 - 12345485
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    ||||||||||||| ||||| ||||| |||||||| || |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| |||||    
T  12345593 tacccgcactttagccatggaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatgaatc 12345494  T
Q  105 gtagtattt 113  Q
    ||| |||||    
T  12345493 gtaatattt 12345485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 8753892 - 8753954
Alignment:
Q  2 tcattacccgcactttaaccatgaaaagacaat-aaaaacatcacaattgaaataaaactatg 63  Q
    |||||| ||||||| |||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  8753892 tcattatccgcactataaccatgaaaagacaataaaaaacaccacaattgaaataaaattatg 8753954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 11788662 - 11788784
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    |||||||| |||| ||||| ||||| |||||||| || |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| |||||    
T  11788662 tacccgcattttagccatggaaagataataaaaatcaccacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatgaatc 11788761  T
Q  105 gtagtatttagtcaaattaaaaa 127  Q
    ||| ||||||  ||||| |||||    
T  11788762 gtaatatttaaccaaataaaaaa 11788784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 39767186 - 39767049
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaac-atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||| ||||||||  || |||| ||||||||||  ||| ||||||||||||||||||| || || | |||||||   ||||||||||||| ||  |    
T  39767186 cattacccacactttaattataaaaatacaataaaaaatatcgcaattgaaataaaactatgatccaatttttttaaagc-aactcataaaatagtagaa 39767088  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
    |||||||||||||| |||||  |||||||| ||||||||    
T  39767087 atcgtagtatttagccaaataaaaaaacatccaaaatat 39767049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 8027501 - 8027368
Alignment:
Q  8 cccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgt 106  Q
    ||||||||||| ||||| ||||| |||||||| || |||| ||||||||||| |||| || |||  |||| |||| |||| |  |||||||| |||||||    
T  8027501 cccgcactttagccatggaaagataataaaaatcaccacacttgaaataaaagtatgatccaaaattttttaaatcaacttacgaaataatatgaatcgt 8027402  T
Q  107 agtatttagtcaaat-taaaaacattcaaaatat 139  Q
    | ||||||| |||||  |||||||| ||||||||    
T  8027401 aatatttagccaaataaaaaaacatccaaaatat 8027368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 15162043 - 15162140
Alignment:
Q  43 cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaa-aaacattcaaaatat 139  Q
    |||| |||||||||||||||| || |||| |||| |||| |||| |  |||||||| |||||||| ||||||| ||||| || |||||| ||||||||    
T  15162043 cacacttgaaataaaactatgatccaaatttttttaaatcaacttacgaaataatatgaatcgtaatatttagccaaataaagaaacatccaaaatat 15162140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 35005517 - 35005457
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataa--aaacatcacaattgaaataaaacta 61  Q
    |||||||| ||||||||  |||||||||||||||  ||||| |||||||||||||||||||    
T  35005517 cattacccacactttaaatatgaaaagacaataaacaaacaccacaattgaaataaaacta 35005457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 41935560 - 41935467
Alignment:
Q  23 tgaaaagacaataaaaa--catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtattta 114  Q
    |||||||||||||||||  || ||||| ||||||| ||||||  || | | | ||| |||| |||||||||||||||| |||||||| ||||||    
T  41935560 tgaaaagacaataaaaaagcaccacaactgaaatacaactataatccagaaaatttcaaatcaactcataaaataatatgaatcgtactattta 41935467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 5926 - 5707
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||  ||| ||| ||||||||||||||||||||||||||    
T  5926 cattacccacactttaactatgaaaagacaataaaaacatcacaaatgaaataaaactacggtcccaatttttaaaaattaactcataaaataatacgaa 5827  T
Q  103 tcgtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttag 202  Q
    |||||||||||||||||||  ||||||| |||||||||  ||||| ||| ||||||  | |||||||||||||||||||||||| |||||||| ||||      
T  5826 tcgtagtatttagtcaaatagaaaacatccaaaatatccctaaaaaattatacactggcctgatggagttgttattgtattaagaagtttttttgtttga 5727  T
Q  203 gttttagtttaggcttaaat 222  Q
    |||| ||||||| |||||||    
T  5726 gtttaagtttagacttaaat 5707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 206
Target Start/End: Complemental strand, 240494 - 240323
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaa 134  Q
    ||||| ||||||| ||||||||||||| | ||  ||| |||||||||||||||||||||||||| ||||||| ||||||||||||||  |||||||||||    
T  240494 aaaaatatcacaaatgaaataaaactacgatcccaattttttaaaattaactcataaaataatatgaatcgtggtatttagtcaaatagaaaacattcaa 240395  T
Q  135 aatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttt 206  Q
    ||||||  ||||| ||| |||||   ||| |||||||||||||||||||||| |||| ||||||||| ||||    
T  240394 aatatccctaaaaaattatacaccggcataatggagttgttattgtattaagcagttgtttggtttaagttt 240323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 222016 - 221878
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaac-atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||||  || ||| |||||||||||  ||||| ||||||||||||||||| || || | |||| |||  |||||||||||||  |  |    
T  222016 cattacccgcactttaattataaaacgacaataaaaaatatcaccattgaaataaaactatgatctaattttttttaaagcaactcataaaataggagaa 221917  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatat 139  Q
    |||||||||||||| || ||  |||||||| ||||||||    
T  221916 atcgtagtatttagccagataaaaaaacatccaaaatat 221878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 222
Target Start/End: Complemental strand, 7135 - 6948
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaa 134  Q
    ||||||||||||| ||||||||||||| | ||  ||| |||| ||||||||||||||||||||| ||||||| ||||||||||||||  ||||||| |||    
T  7135 aaaaacatcacaaatgaaataaaactacgatcccaatttttttaaattaactcataaaataatatgaatcgtggtatttagtcaaatagaaaacatacaa 7036  T
Q  135 aatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    ||||||  ||||||||| |||||    |||||| |||||||||||||||||  |||| ||||||||| ||||   |||||||||||||    
T  7035 aatatccctaaaatattatacaccggaatgatgaagttgttattgtattaaacagttgtttggtttaagtttagatttaggcttaaat 6948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 222
Target Start/End: Complemental strand, 15016 - 14829
Alignment:
Q  35 aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtatttagtcaaattaaaaacattcaa 134  Q
    ||||||||||||| ||||||||||||| | ||  ||| |||| ||||||||||||||||||||| ||||||| ||||||||||||||  ||||||| |||    
T  15016 aaaaacatcacaaatgaaataaaactacgatcccaatttttttaaattaactcataaaataatatgaatcgtggtatttagtcaaatagaaaacatacaa 14917  T
Q  135 aatatctttaaaatattgtacactaacatgatggagttgttattgtattaagtagttttttggtttaggttttagtttaggcttaaat 222  Q
    ||||||  ||||||||| |||||    |||||| |||||||||||||||||  |||| ||||||||| ||||   |||||||||||||    
T  14916 aatatccctaaaatattatacaccggaatgatgaagttgttattgtattaaacagttgtttggtttaagtttagatttaggcttaaat 14829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 26183 - 26053
Alignment:
Q  1 ctcattacccgcactttaaccatgaaaagacaataaaaacat--cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataata 98  Q
    ||||||||||||| |||||| |||||||||||||||||| |   ||||||||||||||||||||| || ||| | ||| |||| ||||||||||||||||    
T  26183 ctcattacccgcattttaactatgaaaagacaataaaaaaaagccacaattgaaataaaactatgatccaaaaaatttcaaatcaactcataaaataata 26084  T
Q  99 cgaatcgtagtatttagtcaaattaaaaaca 129  Q
     |||||||||||||||| ||||| |||||||    
T  26083 tgaatcgtagtatttagccaaataaaaaaca 26053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0602 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0602
Description:

Target: scaffold0602; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 5070 - 5212
Alignment:
Q  12 cactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtat 111  Q
    ||||||||  |||||||||||||||||| |||||||||||| |||||  |||||  ||| ||||| |||| ||||||||||||| |||||||||||||||    
T  5070 cactttaattatgaaaagacaataaaaatatcacaattgaactaaaatcatggttcaaaaattttcaaatcaactcataaaatagtacgaatcgtagtat 5169  T
Q  112 ttagtcaaattaaaaacattcaaaatatctttaaaatattgta 154  Q
    | |   |||| |||||||||||||| |||||| ||| ||||||    
T  5170 tgaacaaaataaaaaacattcaaaacatctttcaaaaattgta 5212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 13137 - 13002
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||||||||||| |||| || ||| | ||| |||| |||| |||||||| ||  | ||    
T  13137 tacccgcactttaaccatgaaaagacaataaaaaacactacaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataagtc 13038  T
Q  105 gtagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    ||||||||||| ||||| |||||||| |||||||||    
T  13037 gtagtatttagccaaataaaaaacatccaaaatatc 13002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 21972 - 21837
Alignment:
Q  6 tacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||||||||||| |||| || ||| | ||| |||| |||| |||||||| ||  | ||    
T  21972 tacccgcactttaaccatgaaaagacaataaaaaacactacaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataagtc 21873  T
Q  105 gtagtatttagtcaaattaaaaacattcaaaatatc 140  Q
    ||||||||||| ||||| |||||||| |||||||||    
T  21872 gtagtatttagccaaataaaaaacatccaaaatatc 21837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 72646 - 72497
Alignment:
Q  5 ttacccgcactttaaccatgaaaagacaataaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatc 104  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||||||||| |||| |   | | |||| |||||||||||||||||| || |||||    
T  72646 ttacccgcgctttaactatgaaa-gacaataaaaacatcacaattgaaataaaattatgat--tattttttttaaattaactcataaaatagtatgaatc 72550  T
Q  105 gtagtatttagtcaaattaaaaacattcaaaatatctttaaaatattgtacac 157  Q
     ||| |||||| ||||| ||||  ||||||||||||  ||||| |||||||||    
T  72549 atagcatttagccaaataaaaattattcaaaatatccctaaaaaattgtacac 72497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 20086 - 20211
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaat-aaaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| |||| || ||| | ||| |||| |||| |||||||| || ||    
T  20086 cattacccgcattttaaccatgaaaagacaattaaaaacgtcacaattgaaataaaattatgatccaaaaaattttaaatcaactaataaaatagtatga 20185  T
Q  102 atcgtagtatttagtcaaattaaaaa 127  Q
    || ||||||||||  ||||| |||||    
T  20186 attgtagtatttaaccaaataaaaaa 20211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 250211 - 250351
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaa-acatcacaattgaaa-taaaactatggtcaaaatattttaaaattaactcataaaataatacg 100  Q
    ||||| |||||||||||| || |||||||||||||| | ||||||||||||| ||||| |||||||  || ||||| |||| ||||||||||||| ||||    
T  250211 cattatccgcactttaactatcaaaagacaataaaatatatcacaattgaaaataaaattatggtcccaaaatttttaaatcaactcataaaatagtacg 250310  T
Q  101 aatcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    |||| || |||||||| ||||  |||||||| |||||||||    
T  250311 aatcataatatttagttaaataaaaaaacatccaaaatatc 250351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 26688 - 26827
Alignment:
Q  3 cattacccgcactttaaccatgaaaagacaataaaaac-atcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacga 101  Q
    |||||||||||||||  | |||| |||||||||||||  ||||||||||||||||||||||| || |||  | || |||| |||| ||||||||||| ||    
T  26688 cattacccgcactttctctatgacaagacaataaaaaatatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatatga 26787  T
Q  102 atcgtagtatttagtcaaat-taaaaacattcaaaatatc 140  Q
    || ||||||||||| |||||  |||||||| |||||||||    
T  26788 attgtagtatttagccaaataaaaaaacatccaaaatatc 26827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 110059 - 109935
Alignment:
Q  4 attacccgcactttaaccatgaaaagacaataaaaa-catcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaa 102  Q
    ||||||||||||||| ||||||||||| |||||||| || |||| |||||||||||||||| |  |||| |||| |||| |||| |  |||||||| |||    
T  110059 attacccgcactttagccatgaaaagataataaaaatcaccacacttgaaataaaactatgattcaaatttttttaaatcaacttacgaaataatatgaa 109960  T
Q  103 tcgtagtatttagtcaaattaaaaa 127  Q
    ||||| ||||||  ||||| |||||    
T  109959 tcgtaatatttaaccaaataaaaaa 109935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0938 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0938
Description:

Target: scaffold0938; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 514 - 656
Alignment:
Q  3 cattacccgcactttaaccatg-----aaaagacaata-aaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataa 96  Q
    ||||||||||||||||||||||      |||||||||| ||||||  ||||||||||||||| |||| || ||| | ||| |||| |||| ||||||||     
T  514 cattacccgcactttaaccatgcaaattaaagacaatagaaaacactacaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatag 613  T
Q  97 tacgaatcgtagtatttagtcaaattaaaaacattcaaaatat 139  Q
    ||  ||||||||||||||| ||| | |||||||| ||||||||    
T  614 tataaatcgtagtatttagccaactaaaaaacatccaaaatat 656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 23938 - 23796
Alignment:
Q  3 cattacccgcactttaaccatg-----aaaagacaata-aaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataa 96  Q
    ||||||||||||||||||||||      |||||||||| ||||||  ||||||||||||||| |||| || ||| | ||| |||| |||| ||||||||     
T  23938 cattacccgcactttaaccatgcaaattaaagacaatagaaaacactacaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatag 23839  T
Q  97 tacgaatcgtagtatttagtcaaattaaaaacattcaaaatat 139  Q
    ||  ||||||||||||||| ||| | |||||||| ||||||||    
T  23838 tataaatcgtagtatttagccaactaaaaaacatccaaaatat 23796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 34106 - 33964
Alignment:
Q  3 cattacccgcactttaaccatg-----aaaagacaata-aaaacatcacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataa 96  Q
    ||||||||||||||||||||||      |||||||||| ||||||  ||||||||||||||| |||| || ||| | ||| |||| |||| ||||||||     
T  34106 cattacccgcactttaaccatgcaaattaaagacaatagaaaacactacaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatag 34007  T
Q  97 tacgaatcgtagtatttagtcaaattaaaaacattcaaaatat 139  Q
    ||  ||||||||||||||| ||| | |||||||| ||||||||    
T  34006 tataaatcgtagtatttagccaactaaaaaacatccaaaatat 33964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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