View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8722_low_1 (Length: 614)

Name: NF8722_low_1
Description: NF8722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8722_low_1
NF8722_low_1
[»] chr6 (14 HSPs)
chr6 (14-568)||(32888779-32889347)
chr6 (341-475)||(9505806-9505940)
chr6 (347-437)||(882728-882818)
chr6 (341-432)||(34620922-34621013)
chr6 (341-432)||(34748359-34748450)
chr6 (364-418)||(31305819-31305873)
chr6 (364-413)||(2493988-2494037)
chr6 (341-418)||(30926751-30926827)
chr6 (341-413)||(4910944-4911016)
chr6 (367-474)||(19260799-19260905)
chr6 (341-391)||(1485145-1485195)
chr6 (378-475)||(1499973-1500070)
chr6 (341-410)||(34027397-34027466)
chr6 (362-418)||(26382396-26382452)
[»] chr5 (11 HSPs)
chr5 (340-419)||(9184986-9185065)
chr5 (364-432)||(35138981-35139049)
chr5 (336-390)||(2937919-2937973)
chr5 (336-406)||(42858139-42858209)
chr5 (362-431)||(4306569-4306638)
chr5 (362-418)||(14161064-14161120)
chr5 (350-409)||(37886019-37886078)
chr5 (363-417)||(6095304-6095358)
chr5 (341-418)||(1999792-1999869)
chr5 (380-449)||(7035071-7035140)
chr5 (405-462)||(10273268-10273325)
[»] chr1 (21 HSPs)
chr1 (366-432)||(48548972-48549038)
chr1 (341-427)||(35689986-35690072)
chr1 (364-428)||(11817279-11817343)
chr1 (364-475)||(52339643-52339754)
chr1 (360-429)||(44786879-44786948)
chr1 (364-448)||(1233364-1233448)
chr1 (365-429)||(5268279-5268343)
chr1 (374-418)||(34915135-34915179)
chr1 (402-462)||(47981796-47981856)
chr1 (366-410)||(49514951-49514995)
chr1 (338-393)||(8381999-8382054)
chr1 (374-429)||(35961437-35961492)
chr1 (345-420)||(49537106-49537181)
chr1 (341-391)||(213536-213586)
chr1 (341-395)||(10324933-10324987)
chr1 (348-406)||(35548832-35548890)
chr1 (366-408)||(39673968-39674010)
chr1 (369-475)||(44394264-44394370)
chr1 (341-398)||(4394274-4394331)
chr1 (364-413)||(15268150-15268199)
chr1 (342-391)||(24587949-24587998)
[»] chr7 (14 HSPs)
chr7 (362-475)||(7168962-7169075)
chr7 (364-432)||(40561716-40561784)
chr7 (341-432)||(44570698-44570789)
chr7 (341-441)||(22310408-22310508)
chr7 (379-443)||(26975303-26975367)
chr7 (342-418)||(41788353-41788429)
chr7 (363-411)||(48253252-48253300)
chr7 (364-475)||(40491637-40491748)
chr7 (375-429)||(25156270-25156324)
chr7 (362-472)||(46344649-46344758)
chr7 (360-405)||(525980-526025)
chr7 (347-432)||(9183873-9183958)
chr7 (361-410)||(38733802-38733851)
chr7 (364-429)||(45005079-45005144)
[»] chr3 (17 HSPs)
chr3 (362-475)||(1114895-1115008)
chr3 (336-449)||(27499303-27499415)
chr3 (341-413)||(52364087-52364159)
chr3 (341-427)||(49356356-49356442)
chr3 (349-422)||(43661883-43661956)
chr3 (364-419)||(37703158-37703212)
chr3 (341-448)||(46853476-46853583)
chr3 (364-418)||(27266766-27266820)
chr3 (402-475)||(31766162-31766235)
chr3 (393-449)||(26800613-26800669)
chr3 (368-475)||(30958099-30958207)
chr3 (368-475)||(30973911-30974019)
chr3 (341-429)||(35264372-35264460)
chr3 (353-405)||(49480437-49480489)
chr3 (362-438)||(36302240-36302318)
chr3 (341-432)||(37334992-37335083)
chr3 (363-408)||(53906683-53906728)
[»] chr4 (16 HSPs)
chr4 (303-406)||(39386631-39386734)
chr4 (341-448)||(41751214-41751321)
chr4 (364-413)||(27096575-27096624)
chr4 (350-429)||(22683909-22683988)
chr4 (365-418)||(33843771-33843824)
chr4 (362-419)||(42182935-42182992)
chr4 (362-418)||(45471049-45471105)
chr4 (341-432)||(47144250-47144341)
chr4 (362-416)||(29435740-29435794)
chr4 (368-429)||(17898089-17898150)
chr4 (332-389)||(30889389-30889446)
chr4 (362-431)||(55244649-55244718)
chr4 (364-413)||(55927747-55927796)
chr4 (364-415)||(10185253-10185305)
chr4 (336-391)||(16551988-16552041)
chr4 (363-475)||(43868194-43868306)
[»] chr8 (20 HSPs)
chr8 (347-429)||(16972025-16972107)
chr8 (362-435)||(4950540-4950613)
chr8 (364-449)||(8700895-8700980)
chr8 (364-417)||(34478167-34478220)
chr8 (368-432)||(11502163-11502227)
chr8 (347-418)||(18123268-18123339)
chr8 (373-418)||(9048006-9048051)
chr8 (364-429)||(36447709-36447774)
chr8 (373-425)||(28805243-28805295)
chr8 (368-432)||(34469364-34469428)
chr8 (400-470)||(10552901-10552971)
chr8 (371-429)||(32033837-32033895)
chr8 (364-429)||(2778572-2778637)
chr8 (331-404)||(38868524-38868597)
chr8 (366-429)||(7720243-7720309)
chr8 (371-407)||(10553155-10553191)
chr8 (361-429)||(14259522-14259589)
chr8 (362-390)||(32767444-32767472)
chr8 (364-432)||(32927951-32928019)
chr8 (341-413)||(35495296-35495368)
[»] chr2 (21 HSPs)
chr2 (341-435)||(44439290-44439384)
chr2 (364-425)||(7151187-7151248)
chr2 (347-475)||(10002164-10002290)
chr2 (361-410)||(29229757-29229805)
chr2 (361-410)||(29343057-29343105)
chr2 (363-475)||(37283313-37283426)
chr2 (364-416)||(9605245-9605297)
chr2 (365-429)||(15220822-15220886)
chr2 (341-432)||(4894115-4894206)
chr2 (401-432)||(14532776-14532807)
chr2 (384-475)||(40704659-40704750)
chr2 (401-475)||(1763269-1763343)
chr2 (364-418)||(16518837-16518891)
chr2 (366-404)||(38074470-38074508)
chr2 (402-475)||(7741061-7741134)
chr2 (402-475)||(12110924-12110997)
chr2 (362-399)||(42140299-42140336)
chr2 (364-432)||(1976822-1976890)
chr2 (362-439)||(2149706-2149787)
chr2 (347-391)||(33019155-33019199)
chr2 (367-427)||(37287837-37287897)
[»] scaffold0361 (1 HSPs)
scaffold0361 (341-432)||(14072-14163)
[»] scaffold0172 (1 HSPs)
scaffold0172 (402-475)||(15244-15317)
[»] scaffold0015 (1 HSPs)
scaffold0015 (402-462)||(65541-65601)


Alignment Details
Target: chr6 (Bit Score: 465; Significance: 0; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 465; E-Value: 0
Query Start/End: Original strand, 14 - 568
Target Start/End: Complemental strand, 32889347 - 32888779
Alignment:
Q  14 ttcttcttcaatgatattttatgtaaactttggaagataattctttctattatgtttggtaccttaagagacaacaatggatcatcaagaggtccaaatt 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32889347 ttcttcttcaatgatattttatgtaaagtttggaagataattctttctattatgtttggtaccttaagagacaacaatggatcatcaagaggtccaaatt 32889248  T
Q  114 gcgacaatgatatttcagattgagtttatccattttgtccttcaaattacacccgatacaagatcattcattgtaggcaaaacatgtacacccaagtaac 213  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32889247 gtgacaatgatatttcagattgagtttatccattttgtccttcaaattacacccgatacaagatcattcattgtaggcaaaacatgtacacccatgtaac 32889148  T
Q  214 atagattc-----aaagcaacagaggcatacaacataacttataatcttaaaagaacaatttgggaatagagaagaaagatcgaaatttactt------- 301  Q
     |||||||     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  32889147 ctagattcaaattaaagcaacagaggcatgcaacataacttataatcttaaaagaacaatttgggaatagagaagaaagatcgaaatttacttttgtctc 32889048  T
Q  302 --gaattcattctacttagagttaaaaactttagcatttagttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatat 399  Q
      |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  32889047 tagaattcattctacttacagttaaaaactttagcatttagttctacaatttattttcaaatttaaatttattgttcaactcacttttacataaatatat 32888948  T
Q  400 ttaaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaattaattcaaaatcaaagttttctcttgtagaaccaaaca 499  Q
    | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32888947 tcaaacataaatcattttatcttcaactcaattataaccaaaattaatttcatagaatcaattaatccaaaatcaaagttttctcttgtagaaccaaaca 32888848  T
Q  500 catacacatcataaatcatatcaaaatgtcttaaaaaacgacaatgataaacacacaaagtatctcgtg 568  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32888847 catacacatcataaatcatatcaaaatgtcttgaaaaacgacaatgataaacacacaaagtatctcgtg 32888779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 341 - 475
Target Start/End: Original strand, 9505806 - 9505940
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaa 440  Q
    |||||| ||||||||| ||| | |||||||||||||||| ||||||||||| |||||||   |||||| |||| |||   |||||||||||| || ||||    
T  9505806 ttctatgattgatttttaaactcaaatttattgttcaacacacttttacatgaatatataataacatatatcactttgccttcaactcaattttagccaa 9505905  T
Q  441 aattaatttcatagaatcaattaattcaaaatcaa 475  Q
    ||| || || | |||||||||| ||||||||||||    
T  9505906 aataaactttacagaatcaattcattcaaaatcaa 9505940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 347 - 437
Target Start/End: Original strand, 882728 - 882818
Alignment:
Q  347 aattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataac 437  Q
    |||||||||| | ||| |||||||||||| ||||||||||| ||| ||| |||  |||||||||||||||||  |||||||||||| ||||    
T  882728 aattgatttttacattcaaatttattgtttaactcacttttgcatgaatgtatccaaacataaatcattttaccttcaactcaattttaac 882818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 34620922 - 34621013
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    ||||| |||||||||| | | | ||||||||| |||||||||||||||||| ||| |||  |||||||||||| ||||  ||||||||||||    
T  34620922 ttctagaattgatttttacactaaaatttatttttcaactcacttttacataaatgtatccaaacataaatcactttaccttcaactcaatt 34621013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 34748359 - 34748450
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    ||||| |||||||||| | | | ||||||||| |||||||||||||||||| ||| |||  |||||||||||| ||||  ||||||||||||    
T  34748359 ttctagaattgatttttacactaaaatttatttttcaactcacttttacataaatgtatccaaacataaatcactttaccttcaactcaatt 34748450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 364 - 418
Target Start/End: Complemental strand, 31305873 - 31305819
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||| ||||||    
T  31305873 aaatttattgatcaactcacttttacattaatatatccaaacataaatgatttta 31305819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 364 - 413
Target Start/End: Complemental strand, 2494037 - 2493988
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatca 413  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  2494037 aaatttattgttcaacacacttttacataaatatattcaaacataaatca 2493988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 418
Target Start/End: Complemental strand, 30926827 - 30926751
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    ||||| |||||||||| | | | ||||||||||||||| | |||||| ||| |||||||| |||||||||||||||||    
T  30926827 ttctagaattgatttttacactcaaatttattgttcaatt-acttttgcatgaatatattcaaacataaatcatttta 30926751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 413
Target Start/End: Original strand, 4910944 - 4911016
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatca 413  Q
    ||||| |||||||||||| ||  |||||||| |||| |||||||||||||| ||| |||  ||||||||||||    
T  4910944 ttctagaattgattttcacatacaaatttatagttcgactcacttttacataaatgtatccaaacataaatca 4911016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 474
Target Start/End: Complemental strand, 19260905 - 19260799
Alignment:
Q  367 tttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaattaatt 466  Q
    |||||||||||||  ||||||||||  |  ||||||||||||||||  ||||| |||||||||||| || ||| ||| ||||| | |||| ||| | |||    
T  19260905 tttattgttcaacctacttttacatacag-tatttaaacataaatccctttatattcaactcaattttagccagaatcaattttacagaaccaaatcatt 19260807  T
Q  467 caaaatca 474  Q
    ||||||||    
T  19260806 caaaatca 19260799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 1485195 - 1485145
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacat 391  Q
    ||||| |||||||||| | | | ||||||||||||||||||||||||||||    
T  1485195 ttctagaattgattttaacactcaaatttattgttcaactcacttttacat 1485145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 475
Target Start/End: Original strand, 1499973 - 1500070
Alignment:
Q  378 actcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaattaattcaaaatcaa 475  Q
    |||||||||||||| ||| |||| |||||||||||| ||||   |||||||  || || ||||||| ||||| | | |||||||| | ||||||||||    
T  1499973 actcacttttacataaatgtattcaaacataaatcaatttacactcaactcgcttttagccaaaatcaattttacaaaatcaattcagtcaaaatcaa 1500070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 34027466 - 34027397
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaa 410  Q
    ||||| |||||||||| | | | ||||||||| ||||||||||| |||||| ||||||| ||| ||||||    
T  34027466 ttctagaattgatttttacactcaaatttattattcaactcactcttacatgaatatatctaaccataaa 34027397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 362 - 418
Target Start/End: Complemental strand, 26382452 - 26382396
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    ||||||||||| ||||| |||||||||| | || | ||||||||||||||| |||||    
T  26382452 ttaaatttattattcaattcacttttacttaaacaaatttaaacataaatcgtttta 26382396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 340 - 419
Target Start/End: Complemental strand, 9185065 - 9184986
Alignment:
Q  340 gttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttat 419  Q
    |||||| |||||||||| | |||||||||||| ||||||||||||| ||||| | | |||| ||||||||||||||||||    
T  9185065 gttctagaattgattttaacatttaaatttatcgttcaactcacttctacataagtgtattcaaacataaatcattttat 9184986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 35139049 - 35138981
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    ||||||||||||||||||||||| | || ||| ||| | ||||||||||||||||  ||||||||||||    
T  35139049 aaatttattgttcaactcactttcatatgaatgtatctgaacataaatcattttaccttcaactcaatt 35138981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 390
Target Start/End: Complemental strand, 2937973 - 2937919
Alignment:
Q  336 tttagttctataattgattttcaaatttaaatttattgttcaactcacttttaca 390  Q
    |||| |||||||||||||||| ||||| ||||||| ||||||||| |||||||||    
T  2937973 tttaattctataattgatttttaaattcaaatttaatgttcaacttacttttaca 2937919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 42858139 - 42858209
Alignment:
Q  336 tttagttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaaca 406  Q
    |||| |||||||||||||||||| |   |||||||| ||||||||||||||||||| ||| |||| |||||    
T  42858139 tttaattctataattgattttcacacacaaatttatagttcaactcacttttacatgaatttattcaaaca 42858209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 362 - 431
Target Start/End: Original strand, 4306569 - 4306638
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaat 431  Q
    ||||||||||||||||| ||  |||||||| ||| |||  |||||||||||||||||  |||||||||||    
T  4306569 ttaaatttattgttcaattcttttttacatgaatgtatccaaacataaatcattttacattcaactcaat 4306638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 362 - 418
Target Start/End: Complemental strand, 14161120 - 14161064
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    |||||||||||||| |||  | ||||||||||||| ||| |||||||||||||||||    
T  14161120 ttaaatttattgttaaacatatttttacattaatacattcaaacataaatcatttta 14161064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 409
Target Start/End: Complemental strand, 37886078 - 37886019
Alignment:
Q  350 tgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataa 409  Q
    ||||||| | ||| |||||||||||||||||||||||||||  ||| |||| ||||||||    
T  37886078 tgatttttacattgaaatttattgttcaactcacttttacacaaatgtattcaaacataa 37886019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 417
Target Start/End: Complemental strand, 6095358 - 6095304
Alignment:
Q  363 taaatttattgttcaactcacttttacattaatatatttaaacataaatcatttt 417  Q
    |||||| |||||| || ||| |||||||| |||||||| ||||||||||||||||    
T  6095358 taaattcattgttaaattcatttttacataaatatattcaaacataaatcatttt 6095304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 418
Target Start/End: Complemental strand, 1999869 - 1999792
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    ||||| |||||||||| | |||||||||| || ||||||||| ||| | || ||| |||||||||||| || ||||||    
T  1999869 ttctagaattgattttaacatttaaattttttcttcaactcagtttaaaataaatgtatttaaacatagattatttta 1999792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 7035140 - 7035071
Alignment:
Q  380 tcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaattt 449  Q
    |||||||||||| ||| | | |||||| ||||||||||| ||| ||||||||| ||| || |||||||||    
T  7035140 tcacttttacataaatttttctaaacacaaatcattttacttttaactcaattttaatcagaattaattt 7035071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 10273325 - 10273268
Alignment:
Q  405 cataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaatt 462  Q
    ||||||||||||||| ||||||||| ||||||  ||||||||||| | | ||||||||    
T  10273325 cataaatcattttatattcaactcacttataagtaaaattaattttacaaaatcaatt 10273268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 366 - 432
Target Start/End: Complemental strand, 48549038 - 48548972
Alignment:
Q  366 atttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    |||||||||||||||||||||||||| ||| |||  |||||||||||||||||  ||||||||||||    
T  48549038 atttattgttcaactcacttttacataaatgtatcaaaacataaatcattttaccttcaactcaatt 48548972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 427
Target Start/End: Complemental strand, 35690072 - 35689986
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaact 427  Q
    ||||| ||| |||||| | ||||||||||||| ||||||| |||||||||| | |||||| ||| |||||||||||||  |||||||    
T  35690072 ttctaaaatcgattttgacatttaaatttattattcaacttacttttacataactatattcaaatataaatcattttacattcaact 35689986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 428
Target Start/End: Complemental strand, 11817343 - 11817279
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactc 428  Q
    |||||||| |||||||| |||||||||||||| |||| ||| | |||||||||||| ||||||||    
T  11817343 aaatttatagttcaactaacttttacattaatgtattcaaataaaaatcattttatcttcaactc 11817279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 364 - 475
Target Start/End: Complemental strand, 52339754 - 52339643
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaatta 463  Q
    ||||||||||||||| |||| ||||||  ||| ||| |||| |||||| ||||||  |||||||||||| ||| || ||| ||||| | | ||||| |||    
T  52339754 aaatttattgttcaagtcacatttacacgaatgtatataaatataaataattttaccttcaactcaattttaagcagaataaattttacataatcattta 52339655  T
Q  464 attcaaaatcaa 475  Q
     |||||||||||    
T  52339654 tttcaaaatcaa 52339643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 360 - 429
Target Start/End: Complemental strand, 44786948 - 44786879
Alignment:
Q  360 atttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    |||||||||| ||||| || |||||||||||| ||| ||||  ||||||||||||||||  |||||||||    
T  44786948 atttaaatttgttgttgaattcacttttacatgaatgtattcgaacataaatcattttacattcaactca 44786879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 448
Target Start/End: Original strand, 1233364 - 1233448
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaatt 448  Q
    |||||||||||| |||||||||| |||| ||| ||| ||||||||||| ||||||  || ||||||  | |||| ||||||||||    
T  1233364 aaatttattgttgaactcactttcacatgaatgtatctaaacataaattattttaccttaaactcatgtttaactaaaattaatt 1233448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 429
Target Start/End: Original strand, 5268279 - 5268343
Alignment:
Q  365 aatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    |||| ||| |||||||||||||||||| |||||||| ||||| |||||| ||||  |||||||||    
T  5268279 aattcatttttcaactcacttttacatgaatatattcaaacaaaaatcactttacattcaactca 5268343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 374 - 418
Target Start/End: Original strand, 34915135 - 34915179
Alignment:
Q  374 ttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||    
T  34915135 ttcaactcacttttacatgaatgtattcaaacataaatcatttta 34915179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 47981856 - 47981796
Alignment:
Q  402 aaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaatt 462  Q
    |||||||||||| ||||  |||||||||||| |||||||||||||||| | | ||||||||    
T  47981856 aaacataaatcactttaaattcaactcaattttaaccaaaattaattttacaaaatcaatt 47981796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 410
Target Start/End: Original strand, 49514951 - 49514995
Alignment:
Q  366 atttattgttcaactcacttttacattaatatatttaaacataaa 410  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||    
T  49514951 atttattattcaactcacttttatatcaatatatttaaacataaa 49514995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 393
Target Start/End: Original strand, 8381999 - 8382054
Alignment:
Q  338 tagttctataattgattttcaaatttaaatttattgttcaactcacttttacatta 393  Q
    |||||||| |||||||||| | ||| || |||||||||||||||||||||| ||||    
T  8381999 tagttctagaattgatttttacattcaagtttattgttcaactcacttttatatta 8382054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 429
Target Start/End: Original strand, 35961437 - 35961492
Alignment:
Q  374 ttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    |||||||||||||||||| ||| |||  |||||||||||||||||  |||||||||    
T  35961437 ttcaactcacttttacatgaatgtatagaaacataaatcattttaccttcaactca 35961492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 420
Target Start/End: Original strand, 49537106 - 49537181
Alignment:
Q  345 ataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttatt 420  Q
    |||||||||||| |  ||| ||||||| ||||||||||||||||||  ||||||| || |||| ||||| ||||||    
T  49537106 ataattgatttttagctttgaatttatagttcaactcacttttacaagaatatatctatacatcaatcaatttatt 49537181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 213586 - 213536
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacat 391  Q
    ||||| |||||||||| ||| | |||||| |||||||||||||||||||||    
T  213586 ttctagaattgatttttaaactcaaatttgttgttcaactcacttttacat 213536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 10324987 - 10324933
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaat 395  Q
    |||||||||||||||| | | | ||||||||||||  ||||||||||||||||||    
T  10324987 ttctataattgatttttacactcaaatttattgttatactcacttttacattaat 10324933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 35548832 - 35548890
Alignment:
Q  348 attgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaaca 406  Q
    ||||||||| | | ||||||||||  |||||||||||||||||| || |||||||||||    
T  35548832 attgattttaacacttaaatttatcattcaactcacttttacataaaaatatttaaaca 35548890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 408
Target Start/End: Original strand, 39673968 - 39674010
Alignment:
Q  366 atttattgttcaactcacttttacattaatatatttaaacata 408  Q
    |||||||||||||||||||||||||| | |||||| |||||||    
T  39673968 atttattgttcaactcacttttacataagtatattcaaacata 39674010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 369 - 475
Target Start/End: Complemental strand, 44394370 - 44394264
Alignment:
Q  369 tattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaattaattca 468  Q
    ||||||| || |||||||||||| ||||||| |||| ||| || |||||| |||||||| | |||||||   |||  |||||| | |||||||| || ||    
T  44394370 tattgtttaattcacttttacataaatatatctaaatatagataattttactttcaacttacttataactggaatcgatttcacataatcaatttatcca 44394271  T
Q  469 aaatcaa 475  Q
    |||||||    
T  44394270 aaatcaa 44394264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 398
Target Start/End: Complemental strand, 4394331 - 4394274
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatata 398  Q
    ||||| |||||||||||| | |||| ||||||||||| || |||||||||| ||||||    
T  4394331 ttctaaaattgattttcagacttaagtttattgttcagctgacttttacataaatata 4394274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 413
Target Start/End: Original strand, 15268150 - 15268199
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatca 413  Q
    |||||||| |||||||||||| |||||| ||| |||||||| ||||||||    
T  15268150 aaatttatggttcaactcactattacatgaatgtatttaaatataaatca 15268199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 391
Target Start/End: Original strand, 24587949 - 24587998
Alignment:
Q  342 tctataattgattttcaaatttaaatttattgttcaactcacttttacat 391  Q
    ||||||||||||||| | | | ||||||||| ||||||||||||||||||    
T  24587949 tctataattgattttaacactcaaatttattattcaactcacttttacat 24587998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 362 - 475
Target Start/End: Original strand, 7168962 - 7169075
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaat 461  Q
    ||||||||||| ||||| |||||||||  | |||||||| |||  |||| || ||||  ||||||||| || |||||||||| ||||||| | |||||||    
T  7168962 ttaaatttattattcaattcacttttatctaaatatattaaaatgtaaaccactttacattcaactcacttttaaccaaaatcaatttcaaaaaatcaat 7169061  T
Q  462 taattcaaaatcaa 475  Q
    ||||| ||||||||    
T  7169062 taatttaaaatcaa 7169075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 40561784 - 40561716
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    |||| ||||||||||||||||||||||| ||| |||  |||||||||||| |||| |||||||||||||    
T  40561784 aaatatattgttcaactcacttttacatgaatgtatccaaacataaatcactttactttcaactcaatt 40561716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 432
Target Start/End: Complemental strand, 44570789 - 44570698
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    |||||| ||| ||||| | ||| |||||||||  |||||||||||||| || |||||| | |||||||||||| ||||  ||||||||||||    
T  44570789 ttctatgattaatttttacattcaaatttatttatcaactcacttttatatgaatataatcaaacataaatcactttacattcaactcaatt 44570698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 441
Target Start/End: Complemental strand, 22310508 - 22310408
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaa 440  Q
    ||||| |||| ||||| | | ||||||||||| ||||| ||||||||||   ||| |||  ||||||||||| |||||| |||||||||||| | |||||    
T  22310508 ttctagaattaatttttacacttaaatttatttttcaattcacttttacgagaatgtatccaaacataaatctttttatcttcaactcaatttttaccaa 22310409  T
Q  441 a 441  Q
    |    
T  22310408 a 22310408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 379 - 443
Target Start/End: Complemental strand, 26975367 - 26975303
Alignment:
Q  379 ctcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaat 443  Q
    ||||||||||||| ||  |||| |||||||||||||||||  ||||||||| ||||||| |||||    
T  26975367 ctcacttttacataaacgtattcaaacataaatcattttacattcaactcacttataactaaaat 26975303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 342 - 418
Target Start/End: Original strand, 41788353 - 41788429
Alignment:
Q  342 tctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    ||||||||||||||| | | | ||||||  ||||||||||||||||| |||||| |||  |||||||||||| ||||    
T  41788353 tctataattgattttaacactcaaatttgctgttcaactcacttttatattaatgtatacaaacataaatcacttta 41788429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 411
Target Start/End: Original strand, 48253252 - 48253300
Alignment:
Q  363 taaatttattgttcaactcacttttacattaatatatttaaacataaat 411  Q
    ||||||||||||| |||||||||||| ||||||||||||| | ||||||    
T  48253252 taaatttattgtttaactcacttttatattaatatatttagatataaat 48253300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 475
Target Start/End: Original strand, 40491637 - 40491748
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaatta 463  Q
    |||||||  ||| ||||||||||||||| ||| |||  ||| |||||||| ||||  ||||||||| || ||  |||||| ||||| | ||||||||||     
T  40491637 aaatttaaagtttaactcacttttacatgaatgtatccaaaaataaatcactttaccttcaactcacttttagtcaaaatcaattttacagaatcaattc 40491736  T
Q  464 attcaaaatcaa 475  Q
    | ||||||||||    
T  40491737 actcaaaatcaa 40491748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 375 - 429
Target Start/End: Original strand, 25156270 - 25156324
Alignment:
Q  375 tcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    |||||||||||||| || ||| |||| ||||| |||||||||||| |||||||||    
T  25156270 tcaactcacttttatatgaatgtattcaaacacaaatcattttatcttcaactca 25156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 362 - 472
Target Start/End: Original strand, 46344649 - 46344758
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaat 461  Q
    |||||||||||||| || |||||||| ||| ||| |||| ||| | || ||| || |||||||||| |||  |||||| ||| ||||| |||||||  ||    
T  46344649 ttaaatttattgtttaattcacttttgcataaatgtattcaaatacaa-tcacttgattttcaacttaatattaaccataatcaattttatagaattgat 46344747  T
Q  462 taattcaaaat 472  Q
    |||||||||||    
T  46344748 taattcaaaat 46344758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 405
Target Start/End: Complemental strand, 526025 - 525980
Alignment:
Q  360 atttaaatttattgttcaactcacttttacattaatatatttaaac 405  Q
    ||||||||||||| |||||||||||||||| | |||||||| ||||    
T  526025 atttaaatttattattcaactcacttttacctgaatatattcaaac 525980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 432
Target Start/End: Complemental strand, 9183958 - 9183873
Alignment:
Q  347 aattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    |||||| ||| | ||| ||||||||||||||| ||||  |||||  ||| ||| ||||||||||| ||||||  ||||||||||||    
T  9183958 aattgagttttatattcaaatttattgttcaagtcacacttacacgaatgtatataaacataaataattttaccttcaactcaatt 9183873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 38733802 - 38733851
Alignment:
Q  361 tttaaatttattgttcaactcacttttacattaatatatttaaacataaa 410  Q
    ||||||||||||||| ||  ||||||||||| |||| |||||||||||||    
T  38733802 tttaaatttattgtttaatccacttttacataaatacatttaaacataaa 38733851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 45005079 - 45005144
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    ||||||||| |||||||||||||||||| |||||||  |||||| ||||  ||||  |||||||||    
T  45005079 aaatttattattcaactcacttttacataaatatatcaaaacatcaatcggtttaccttcaactca 45005144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 362 - 475
Target Start/End: Original strand, 1114895 - 1115008
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaat 461  Q
    |||||||||| |||| ||||||||| |||| ||||||| |||||| |||||| ||||| ||||||| | || || | ||||| || || ||||||||||     
T  1114895 ttaaatttatggttctactcactttaacatgaatatatataaacacaaatcactttatattcaacttatttttagcgaaaatcaagtttatagaatcaac 1114994  T
Q  462 taattcaaaatcaa 475  Q
    | ||||||||||||    
T  1114995 tcattcaaaatcaa 1115008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 449
Target Start/End: Complemental strand, 27499415 - 27499303
Alignment:
Q  336 tttagttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattata 435  Q
    |||| ||||| |||||||||| | | ||||||| ||||||||| |||||||||| | |||||||| || ||||||||| ||||| ||||| ||| || ||    
T  27499415 tttaattctaaaattgattttaatacttaaatt-attgttcaaatcacttttacgtaaatatattaaaccataaatcactttatcttcaattcattttta 27499317  T
Q  436 accaaaattaattt 449  Q
    || |||||||||||    
T  27499316 actaaaattaattt 27499303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 341 - 413
Target Start/End: Original strand, 52364087 - 52364159
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatca 413  Q
    ||||||||||||||||||||  ||||||||  ||||||||||||||||||| ||  |||||||||| ||||||    
T  52364087 ttctataattgattttcaaacataaatttacagttcaactcacttttacataaaattatttaaacacaaatca 52364159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 427
Target Start/End: Complemental strand, 49356442 - 49356356
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaact 427  Q
    |||||||||||||||| | |  ||||||||| ||| |||  ||| |||||| ||||||||||||||||||| ||||||| |||||||    
T  49356442 ttctataattgatttttacaaataaatttatggtttaacctactcttacataaatatatttaaacataaattattttatcttcaact 49356356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 43661883 - 43661956
Alignment:
Q  349 ttgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttatttt 422  Q
    |||||||||| |  ||||| ||||||||||||||||||||||| ||| |||  |||||||||| ||||||||||    
T  43661883 ttgattttcacacataaatgtattgttcaactcacttttacatgaatgtataaaaacataaattattttatttt 43661956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 364 - 419
Target Start/End: Original strand, 37703158 - 37703212
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttat 419  Q
    ||||||||||||||| |||||||||||| ||||||||| ||| |||||||||||||    
T  37703158 aaatttattgttcaattcacttttacataaatatattt-aacttaaatcattttat 37703212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 448
Target Start/End: Complemental strand, 46853583 - 46853476
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaa 440  Q
    ||||| |||||||||| | | | |||||||||||||||||||||||||||| |||||||    |||||||||| ||||  ||||||| | || || ||||    
T  46853583 ttctagaattgattttaacactcaaatttattgttcaactcacttttacataaatatatcctgacataaatcactttaccttcaacttacttgtagccaa 46853484  T
Q  441 aattaatt 448  Q
    ||| ||||    
T  46853483 aatcaatt 46853476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 418
Target Start/End: Complemental strand, 27266820 - 27266766
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    ||||||||||||||||| |||||||||| || |||| ||||||||||||| ||||    
T  27266820 aaatttattgttcaactaacttttacatgaaaatatctaaacataaatcacttta 27266766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 402 - 475
Target Start/End: Complemental strand, 31766235 - 31766162
Alignment:
Q  402 aaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaattaattcaaaatcaa 475  Q
    |||||||||||| ||||  ||||||||| || || ||||||||||||| | | |||||||| ||||||||||||    
T  31766235 aaacataaatcactttaacttcaactcacttttatccaaaattaattttacaaaatcaattcattcaaaatcaa 31766162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 26800613 - 26800669
Alignment:
Q  393 aatatatttaaacataaatcattttattttcaactcaattataaccaaaattaattt 449  Q
    |||||||  ||||||||||||||||| |||||||||| || ||| ||||||||||||    
T  26800613 aatatatcaaaacataaatcattttaatttcaactcatttttaatcaaaattaattt 26800669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 475
Target Start/End: Original strand, 30958099 - 30958207
Alignment:
Q  368 ttattgttcaactcacttttacattaatatatttaaacataaat-cattttattttcaactcaattataaccaaaattaatttcatagaatcaattaatt 466  Q
    ||||||||||| |||||||||||| |||||||  ||||||||||  | ||||  |||||||||  | || ||||||| ||||| | | |||||||| |||    
T  30958099 ttattgttcaattcacttttacatgaatatatccaaacataaataaactttacattcaactcacatttagccaaaatcaattttacaaaatcaattcatt 30958198  T
Q  467 caaaatcaa 475  Q
    |||||||||    
T  30958199 caaaatcaa 30958207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 475
Target Start/End: Original strand, 30973911 - 30974019
Alignment:
Q  368 ttattgttcaactcacttttacattaatatatttaaacataaat-cattttattttcaactcaattataaccaaaattaatttcatagaatcaattaatt 466  Q
    ||||||||||| |||||||||||| |||||||  ||||||||||  | ||||  |||||||||  | || ||||||| ||||| | | |||||||| |||    
T  30973911 ttattgttcaattcacttttacatgaatatatccaaacataaataaactttacattcaactcacatttagccaaaatcaattttacaaaatcaattcatt 30974010  T
Q  467 caaaatcaa 475  Q
    |||||||||    
T  30974011 caaaatcaa 30974019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 341 - 429
Target Start/End: Complemental strand, 35264460 - 35264372
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    ||||| |||||||||| | | ||||||||||||||||| ||| |||||||| ||| ||   |||||||| ||| |||| ||||||||||    
T  35264460 ttctagaattgattttaacacttaaatttattgttcaagtcatttttacatgaatgtacccaaacataactcactttactttcaactca 35264372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 353 - 405
Target Start/End: Complemental strand, 49480489 - 49480437
Alignment:
Q  353 ttttcaaatttaaatttattgttcaactcacttttacattaatatatttaaac 405  Q
    |||| ||||||||||||||||||||| ||||||| |||||||| |||| ||||    
T  49480489 tttttaaatttaaatttattgttcaaatcactttaacattaatgtattcaaac 49480437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 438
Target Start/End: Original strand, 36302240 - 36302318
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatatttaaacataaatca--ttttattttcaactcaattataacc 438  Q
    |||||||||||||||||||||||||||||| |||  ||  | |||| |||||  |||||| |||||||||||| |||||    
T  36302240 ttaaatttattgttcaactcacttttacatgaatgaatccacacattaatcattttttatcttcaactcaattttaacc 36302318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 432
Target Start/End: Complemental strand, 37335083 - 37334992
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    ||||| |||||||||| | | || |||| ||||||||||||| ||||| || ||| |||| | |||||||||| ||||  ||||||||||||    
T  37335083 ttctagaattgatttttacacttgaattcattgttcaactcatttttatatgaatgtattcagacataaatcactttaccttcaactcaatt 37334992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 53906683 - 53906728
Alignment:
Q  363 taaatttattgttcaactcacttttacattaatatatttaaacata 408  Q
    |||||||||||||||| | |||||||||| |||||||| |||||||    
T  53906683 taaatttattgttcaatttacttttacatgaatatattgaaacata 53906728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 406
Target Start/End: Original strand, 39386631 - 39386734
Alignment:
Q  303 aattcattctacttagagttaaaaactttagcatttagttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatattta 402  Q
    |||| |||||||||| || |||||  | || |||||| |||||||||||||||||| |   | |||||  ||||||||||||||||||| ||||||||||    
T  39386631 aattgattctacttaaagctaaaatttataacatttaattctataattgattttcacacacatatttaaagttcaactcacttttacatgaatatattta 39386730  T
Q  403 aaca 406  Q
    ||||    
T  39386731 aaca 39386734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 448
Target Start/End: Complemental strand, 41751321 - 41751214
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaa 440  Q
    ||||| |||||||||| ||| |||||||||||||| || ||| |||||||| ||| |||| |||||| ||||| ||||| || |||||| || ||| |||    
T  41751321 ttctagaattgatttttaaacttaaatttattgtttaattcagttttacatgaatgtattcaaacattaatcactttatcttgaactcacttttaaacaa 41751222  T
Q  441 aattaatt 448  Q
    ||| ||||    
T  41751221 aataaatt 41751214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 364 - 413
Target Start/End: Complemental strand, 27096624 - 27096575
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatca 413  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  27096624 aaatttattgttcaacacacttttacataaatatattcaaacataaatca 27096575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 350 - 429
Target Start/End: Original strand, 22683909 - 22683988
Alignment:
Q  350 tgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    ||||||| | ||| |||||||||||||||||| ||||||||| ||| | |  ||||||||| ||||||| ||||||||||    
T  22683909 tgatttttacattgaaatttattgttcaactcgcttttacataaatgtgtccaaacataaaccattttactttcaactca 22683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 33843771 - 33843824
Alignment:
Q  365 aatttattgttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    |||||||||||||||||||| |||||| |||||||  |||||||||||| ||||    
T  33843771 aatttattgttcaactcactattacatgaatatatccaaacataaatcacttta 33843824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 42182935 - 42182992
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttat 419  Q
    |||||||||||||| |||||||||| | || |||| |||||||||||||| |||||||    
T  42182935 ttaaatttattgttaaactcactttaagataaatacatttaaacataaattattttat 42182992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 45471049 - 45471105
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    |||||||||||||| |||||| |||||| | |||||||||||| |||||||| ||||    
T  45471049 ttaaatttattgtttaactcatttttacttaaatatatttaaatataaatcacttta 45471105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 47144250 - 47144341
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    |||||||||||||||| |   | ||||||||||| ||||| ||||||| || ||| |||  |||||||||||| | ||| ||||||||||||    
T  47144250 ttctataattgatttttacgctaaaatttattgtccaactaacttttagatgaatgtatccaaacataaatcaatatatcttcaactcaatt 47144341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 29435794 - 29435740
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattt 416  Q
    |||||||||||||||||| ||||||||||  |||||| | ||| |||||||||||    
T  29435794 ttaaatttattgttcaacccacttttacaaaaatatactcaaatataaatcattt 29435740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 429
Target Start/End: Complemental strand, 17898150 - 17898089
Alignment:
Q  368 ttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    ||||||||||| |||||||||| | |||||||  |||||||||||| ||||  |||||||||    
T  17898150 ttattgttcaattcacttttacctaaatatatccaaacataaatcactttacattcaactca 17898089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 30889389 - 30889446
Alignment:
Q  332 agcatttagttctataattgattttcaaatttaaatttattgttcaactcacttttac 389  Q
    |||||||  ||||| |||||||||| | |||||| |||||| ||||||||||||||||    
T  30889389 agcattttattctaaaattgattttgacatttaattttattattcaactcacttttac 30889446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 431
Target Start/End: Original strand, 55244649 - 55244718
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaat 431  Q
    ||||||||||| ||||||| | |||||||| ||| |||  |||||| || |||||||| |||||||||||    
T  55244649 ttaaatttattcttcaacttatttttacataaatgtatccaaacattaaccattttatcttcaactcaat 55244718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 413
Target Start/End: Complemental strand, 55927796 - 55927747
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatca 413  Q
    ||||||||||||||| |||||||||||| ||| |||  ||||||||||||    
T  55927796 aaatttattgttcaagtcacttttacatgaatgtatccaaacataaatca 55927747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 10185253 - 10185305
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatat-ttaaacataaatcatt 415  Q
    |||||||||||| ||||||||||||||||||| |||   ||||||||||||||    
T  10185253 aaatttattgtttaactcacttttacattaatgtatccaaaacataaatcatt 10185305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 391
Target Start/End: Original strand, 16551988 - 16552041
Alignment:
Q  336 tttagttctataattgattttcaaatttaaatttattgttcaactcacttttacat 391  Q
    |||||||||| |||||||||||| |   |||||||| |||||||||||||||||||    
T  16551988 tttagttctagaattgattttcacac--aaatttatagttcaactcacttttacat 16552041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 475
Target Start/End: Original strand, 43868194 - 43868306
Alignment:
Q  363 taaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaatt 462  Q
    |||||||||  || || |||||||||||| ||| |||  ||| | |||||| |||| |||||||| | || |||| | ||||||||| | | ||||||||    
T  43868194 taaatttataatttaagtcacttttacataaatgtatccaaagacaaatcactttactttcaacttacttttaactagaattaattttacaaaatcaatt 43868293  T
Q  463 aattcaaaatcaa 475  Q
     ||||||||||||    
T  43868294 cattcaaaatcaa 43868306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 347 - 429
Target Start/End: Complemental strand, 16972107 - 16972025
Alignment:
Q  347 aattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    |||||||||| |||   ||||||||||||||| |||||||||||| ||| |||| ||||| |||||||||||  |||||||||    
T  16972107 aattgatttttaaacacaaatttattgttcaaatcacttttacatgaatgtattcaaacacaaatcattttaccttcaactca 16972025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 362 - 435
Target Start/End: Original strand, 4950540 - 4950613
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattata 435  Q
    ||||||||||| |||||||||||||  ||| |||||||  |||||||||||| ||||  |||||||||||||||    
T  4950540 ttaaatttatttttcaactcactttctcataaatatatccaaacataaatcactttaccttcaactcaattata 4950613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 364 - 449
Target Start/End: Original strand, 8700895 - 8700980
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaattt 449  Q
    |||| ||||||||||||||||||||||  ||| ||||||||||||||| | ||||  |||||||||||| ||| || ||| |||||    
T  8700895 aaatatattgttcaactcacttttacaagaatttatttaaacataaattactttaccttcaactcaattttaaacataatcaattt 8700980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 364 - 417
Target Start/End: Complemental strand, 34478220 - 34478167
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcatttt 417  Q
    ||||||||||||||||| | |||||||| |||| ||||||||||||||||||||    
T  34478220 aaatttattgttcaacttatttttacatcaatacatttaaacataaatcatttt 34478167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 432
Target Start/End: Complemental strand, 11502227 - 11502163
Alignment:
Q  368 ttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    |||||||| ||||||||||||| | |||||||| ||| ||||||||||||| ||| |||||||||    
T  11502227 ttattgtttaactcacttttacttaaatatattaaaaaataaatcattttactttaaactcaatt 11502163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 347 - 418
Target Start/End: Original strand, 18123268 - 18123339
Alignment:
Q  347 aattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    |||||||||| |  |||||| |||| ||||||||||||||||||| ||||||||  |||| |||||||||||    
T  18123268 aattgatttttacgtttaaagttatagttcaactcacttttacataaatatattccaacacaaatcatttta 18123339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 9048051 - 9048006
Alignment:
Q  373 gttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||    
T  9048051 gttcaactcatttttatattaatatatttaaacacaaatcatttta 9048006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 36447774 - 36447709
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    ||||||||| ||||||||| || ||||| ||| ||| |||||| |||||||||||| |||||||||    
T  36447774 aaatttattattcaactcagttatacataaatgtatctaaacacaaatcattttatattcaactca 36447709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 28805243 - 28805295
Alignment:
Q  373 gttcaactcacttttacattaatatatttaaacataaatcattttattttcaa 425  Q
    |||||||| ||||||| |||||| |||| ||||||||||||||||| ||||||    
T  28805243 gttcaacttacttttatattaatgtattcaaacataaatcattttactttcaa 28805295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 432
Target Start/End: Original strand, 34469364 - 34469428
Alignment:
Q  368 ttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    ||||||||||||||||||||||||  ||||||  |||| ||||| ||||||  ||||||||||||    
T  34469364 ttattgttcaactcacttttacatgtatatatacaaacttaaattattttacattcaactcaatt 34469428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 10552971 - 10552901
Alignment:
Q  400 ttaaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaattaattcaaa 470  Q
    |||||||||||||| ||||  ||||||||| || |||||||||| ||||| | || ||||||| |||||||    
T  10552971 ttaaacataaatcaatttacattcaactcacttttaaccaaaatcaattttagagtatcaatttattcaaa 10552901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 32033895 - 32033837
Alignment:
Q  371 ttgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    |||||||||||| |||||| | |||||||  ||||| |||| |||||||||||||||||    
T  32033895 ttgttcaactcaattttacttaaatatatccaaacacaaattattttattttcaactca 32033837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 429
Target Start/End: Original strand, 2778572 - 2778637
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    |||| ||||||||||||||||||| ||| ||| |||  ||| |||||||| ||||| |||||||||    
T  2778572 aaatctattgttcaactcacttttgcataaatttatccaaaaataaatcactttatcttcaactca 2778637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 38868524 - 38868597
Alignment:
Q  331 tagcatttagttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaa 404  Q
    |||| ||| ||||||||||||||||||| |   |||||||| |||||||||| ||||||| |||| ||| ||||    
T  38868524 tagcttttggttctataattgattttcacacacaaatttatagttcaactcaattttacaataatgtatctaaa 38868597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 429
Target Start/End: Original strand, 7720243 - 7720309
Alignment:
Q  366 atttattgttcaactcacttttacattaatatatt---taaacataaatcattttattttcaactca 429  Q
    |||||| ||||||||||||||||||| ||||||||   |||||| |||||| |||| | ||||||||    
T  7720243 atttatggttcaactcacttttacatgaatatattatataaacacaaatcactttactctcaactca 7720309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 407
Target Start/End: Complemental strand, 10553191 - 10553155
Alignment:
Q  371 ttgttcaactcacttttacattaatatatttaaacat 407  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  10553191 ttgttcaactcacttttacataaatgtatttaaacat 10553155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 429
Target Start/End: Complemental strand, 14259589 - 14259522
Alignment:
Q  361 tttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    ||||||||||||||||| |||||||| |  | |||||||| ||||||||| |||||||  |||||||||    
T  14259589 tttaaatttattgttcatctcactttcatgtaaatatattcaaacataaa-cattttacattcaactca 14259522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 362 - 390
Target Start/End: Original strand, 32767444 - 32767472
Alignment:
Q  362 ttaaatttattgttcaactcacttttaca 390  Q
    |||||||||||||||||||||||||||||    
T  32767444 ttaaatttattgttcaactcacttttaca 32767472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 32927951 - 32928019
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    |||||||| ||||||||||||||||||| ||| |||  ||||| |||||| |||   ||||||||||||    
T  32927951 aaatttatagttcaactcacttttacatgaatgtatccaaacacaaatcactttgccttcaactcaatt 32928019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 341 - 413
Target Start/End: Original strand, 35495296 - 35495368
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatca 413  Q
    |||||||||||||||| | | | ||||||||||||||| |||||||||  | ||| |||  ||||||||||||    
T  35495296 ttctataattgatttttatactcaaatttattgttcaaatcacttttatttgaatgtatccaaacataaatca 35495368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 44439290 - 44439384
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattata 435  Q
    ||||| |||||||||| | | | |||||||||||||||||||||||||||| || ||||  |||||||||||| ||||  || |||||| |||||    
T  44439290 ttctaaaattgattttaacactcaaatttattgttcaactcacttttacataaacatatccaaacataaatcactttacatttaactcacttata 44439384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 364 - 425
Target Start/End: Complemental strand, 7151248 - 7151187
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaa 425  Q
    ||||||||| |||||||||||||||||| |||| |||| || |||||| ||||||| |||||    
T  7151248 aaatttattcttcaactcacttttacataaataaattttaatataaattattttatcttcaa 7151187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 347 - 475
Target Start/End: Complemental strand, 10002290 - 10002164
Alignment:
Q  347 aattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaa 446  Q
    |||||||||| | |||| |||||||||||||||| ||| ||||   ||| | |||||| ||||||| |||||| ||||| ||| || ||||   ||| ||    
T  10002290 aattgattttaagattttaatttattgttcaacttactcttacg--aatgtttttaaatataaatcgttttatcttcaattcacttttaacttgaatcaa 10002193  T
Q  447 tttcatagaatcaattaattcaaaatcaa 475  Q
    ||| |||||||||| | ||||||||||||    
T  10002192 ttttatagaatcaaatcattcaaaatcaa 10002164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 29229805 - 29229757
Alignment:
Q  361 tttaaatttattgttcaactcacttttacattaatatatttaaacataaa 410  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  29229805 tttaaatttattgttcaa-tcacttttacataaatatatctaaacataaa 29229757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 29343105 - 29343057
Alignment:
Q  361 tttaaatttattgttcaactcacttttacattaatatatttaaacataaa 410  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  29343105 tttaaatttattgttcaa-tcacttttacataaatatatctaaacataaa 29343057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 475
Target Start/End: Original strand, 37283313 - 37283426
Alignment:
Q  363 taaatttattgttcaactcacttttacattaatatattt-aaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaat 461  Q
    ||||| ||| |||||||| |||||||| | ||||||| | ||| | |||| ||||||||||||||||| || ||| | |||| ||||| ||| |||||||    
T  37283313 taaatatatagttcaacttacttttacctgaatatatctcaaatacaaataattttattttcaactcacttttaatctaaatcaattttatataatcaat 37283412  T
Q  462 taattcaaaatcaa 475  Q
    | | ||||||||||    
T  37283413 ttagtcaaaatcaa 37283426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 416
Target Start/End: Original strand, 9605245 - 9605297
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattt 416  Q
    |||||||||||||||||||||||||||| ||| ||| || ||||| |||||||    
T  9605245 aaatttattgttcaactcacttttacataaatgtatctatacatacatcattt 9605297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 429
Target Start/End: Complemental strand, 15220886 - 15220822
Alignment:
Q  365 aatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactca 429  Q
    |||||||||||||||||||||| |||| ||| |||  |||||||||||| ||||  |||||||||    
T  15220886 aatttattgttcaactcactttaacatgaatgtatccaaacataaatcactttacattcaactca 15220822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 432
Target Start/End: Complemental strand, 4894206 - 4894115
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    |||||||||||||| | | | | ||||||||| ||||| ||||||||| || ||| ||| ||||||||||||| ||||  ||||||| ||||    
T  4894206 ttctataattgattattatactcaaatttattattcaagtcacttttaaatgaatgtatctaaacataaatcactttaccttcaacttaatt 4894115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 432
Target Start/End: Complemental strand, 14532807 - 14532776
Alignment:
Q  401 taaacataaatcattttattttcaactcaatt 432  Q
    ||||||||||||||||||||||||||||||||    
T  14532807 taaacataaatcattttattttcaactcaatt 14532776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 475
Target Start/End: Original strand, 40704659 - 40704750
Alignment:
Q  384 ttttacattaatatatttaaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaattaattcaaaatcaa 475  Q
    ||||| |||||| |||| |||  ||||||| ||||  ||||| | |||| |||||||||| ||||||| | |||||||| ||||||||||||    
T  40704659 ttttatattaatgtattcaaaattaaatcaatttacattcaaataaattttaaccaaaatcaatttcacataatcaattcattcaaaatcaa 40704750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 475
Target Start/End: Original strand, 1763269 - 1763343
Alignment:
Q  401 taaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaattaattcaaaatcaa 475  Q
    ||||||||||||| ||||  |||||||||||| |||||||||| ||||| | | ||||||||   ||||||||||    
T  1763269 taaacataaatcactttaaattcaactcaattttaaccaaaatcaattttacaaaatcaattttatcaaaatcaa 1763343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 16518837 - 16518891
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcatttta 418  Q
    |||||||| ||||||||||||||||||| ||| |||  ||||| |||||||||||    
T  16518837 aaatttatagttcaactcacttttacatgaatgtatccaaacacaaatcatttta 16518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 404
Target Start/End: Original strand, 38074470 - 38074508
Alignment:
Q  366 atttattgttcaactcacttttacattaatatatttaaa 404  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  38074470 atttattgttcaactcacttttacataaatgtatttaaa 38074508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 475
Target Start/End: Complemental strand, 7741134 - 7741061
Alignment:
Q  402 aaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaattaattcaaaatcaa 475  Q
    |||||||| |||||| |||||||||||| || | | || ||| ||||| ||||||| |||| ||||||||||||    
T  7741134 aaacataactcatttcattttcaactcacttttgatcagaatcaattttatagaattaattcattcaaaatcaa 7741061  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 475
Target Start/End: Original strand, 12110924 - 12110997
Alignment:
Q  402 aaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaattaattcaaaatcaa 475  Q
    |||||||||||| ||||| ||||||||| || |||||||||| ||||| | | ||||||||   ||||||||||    
T  12110924 aaacataaatcactttatattcaactcacttttaaccaaaatcaatttgacaaaatcaattctatcaaaatcaa 12110997  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 399
Target Start/End: Complemental strand, 42140336 - 42140299
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatat 399  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  42140336 ttaaatttattgttcaactaaattttacattaatatat 42140299  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 1976890 - 1976822
Alignment:
Q  364 aaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    |||||||||||| ||||||||||||||| ||| |||  |||||||| ||  ||||  ||||||||||||    
T  1976890 aaatttattgttgaactcacttttacatgaatgtatccaaacataagtcgctttaccttcaactcaatt 1976822  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 362 - 439
Target Start/End: Original strand, 2149706 - 2149787
Alignment:
Q  362 ttaaatttattgttcaactcacttttacattaatatattta----aacataaatcattttattttcaactcaattataacca 439  Q
    ||||||||||||||||||| | |||||||  || |||||||    ||||||||| |||||| |||||||||| || ||||||    
T  2149706 ttaaatttattgttcaacttatttttacaaaaagatatttatctaaacataaattattttactttcaactcatttttaacca 2149787  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 33019199 - 33019155
Alignment:
Q  347 aattgattttcaaatttaaatttattgttcaactcacttttacat 391  Q
    |||||||||||| |  ||||||||| |||||||||||||||||||    
T  33019199 aattgattttcacacataaatttatagttcaactcacttttacat 33019155  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 37287837 - 37287897
Alignment:
Q  367 tttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaact 427  Q
    |||||||||| ||||||| |||||| ||| ||| ||||||||||| ||||||  |||||||    
T  37287837 tttattgttcgactcactattacatgaatgtatataaacataaattattttaccttcaact 37287897  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 432
Target Start/End: Complemental strand, 14163 - 14072
Alignment:
Q  341 ttctataattgattttcaaatttaaatttattgttcaactcacttttacattaatatatttaaacataaatcattttattttcaactcaatt 432  Q
    ||||| |||||||||| | | | ||||||||| ||||||||||||| |||| ||| |||  |||||||||||| ||||  ||||||||||||    
T  14163 ttctagaattgatttttacactcaaatttatttttcaactcactttcacatgaatgtatccaaacataaatcactttaccttcaactcaatt 14072  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 475
Target Start/End: Complemental strand, 15317 - 15244
Alignment:
Q  402 aaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaattaattcaaaatcaa 475  Q
    |||||||||||| ||||| ||||||||| || |||||||||| ||||| | | ||||||||   ||||||||||    
T  15317 aaacataaatcactttatattcaactcacttttaaccaaaatcaatttgacaaaatcaattctatcaaaatcaa 15244  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 462
Target Start/End: Original strand, 65541 - 65601
Alignment:
Q  402 aaacataaatcattttattttcaactcaattataaccaaaattaatttcatagaatcaatt 462  Q
    |||||||||||| ||||  || |||||| || |||||||||| ||||||| ||||||||||    
T  65541 aaacataaatcactttacattaaactcatttttaaccaaaatcaatttcacagaatcaatt 65601  T

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