View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8723_high_10 (Length: 258)
Name: NF8723_high_10
Description: NF8723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8723_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 9 - 242
Target Start/End: Original strand, 33966395 - 33966629
Alignment:
| Q |
9 |
tctattcgcaatttcaatttaatctaaagctcatccgaaatgtaaataaagtttgactaaggattgcttcagttaaaattcgaattcagattcttccaa- |
107 |
Q |
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| T |
33966395 |
tctattctcaatttcaatttaatctaaagctcatccgaaatgtaaataaagtttgactaaggattatttcagttaaaattcgaattcagattcttccaaa |
33966494 |
T |
|
| Q |
108 |
taatatgtcttccatcgaagcttatctactactcaagtccaatcaattgattaccttaacatacatattttatcacaatttttcgcaatatcaagaattc |
207 |
Q |
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|||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33966495 |
taatatgtcttccatccaagcttatctactactcgagtccaatcaattgattaccttaacatacatattttatcacaatttttcgcaatatcaagaattc |
33966594 |
T |
|
| Q |
208 |
cgacgtgaccgcaaattaaaaactttggacacaat |
242 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
33966595 |
cgacgtgaccgcaaattaaaaactttggacacaat |
33966629 |
T |
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