View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8723_high_11 (Length: 254)
Name: NF8723_high_11
Description: NF8723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8723_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 1922948 - 1923144
Alignment:
| Q |
17 |
gaacattgggaagggagagggaaaaaagaaaggaaagataggnnnnnnnnncaactatctttccttcgaagatttttaattttcttgtttatttcccttc |
116 |
Q |
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| T |
1922948 |
gaacattgggaagggagagggaaaaa-gaaaggaaagatagaaacaaaaaacaactatctttccttcaaagatttttaattttcttgcttatttcccttc |
1923046 |
T |
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| Q |
117 |
tcaacatttgacattaaggtcatttcaaattcatatatctcattgtgctgcttgggtttataattttttctgcatacaaagatattcataagcaggta |
214 |
Q |
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| T |
1923047 |
tcaacatttgacattaaggtcatttcaaattcatatatctaattgtgctgcttgggtttataatattttctgcatgcaaagatattcataagcaggta |
1923144 |
T |
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