View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8723_low_18 (Length: 224)

Name: NF8723_low_18
Description: NF8723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8723_low_18
NF8723_low_18
[»] chr4 (19 HSPs)
chr4 (13-213)||(48098288-48098488)
chr4 (28-212)||(53823362-53823546)
chr4 (27-211)||(25753129-25753313)
chr4 (13-213)||(39420939-39421139)
chr4 (36-213)||(22811109-22811285)
chr4 (14-209)||(38637160-38637353)
chr4 (26-207)||(2061677-2061858)
chr4 (13-143)||(16832947-16833077)
chr4 (13-213)||(49747483-49747683)
chr4 (14-143)||(41117894-41118023)
chr4 (22-97)||(49528143-49528218)
chr4 (120-205)||(2825746-2825831)
chr4 (117-213)||(30964396-30964492)
chr4 (92-207)||(46698790-46698905)
chr4 (113-213)||(8254982-8255082)
chr4 (113-213)||(8268400-8268500)
chr4 (113-189)||(19815250-19815326)
chr4 (83-213)||(16501688-16501816)
chr4 (122-185)||(31050697-31050760)
[»] chr7 (30 HSPs)
chr7 (13-211)||(8745110-8745308)
chr7 (28-213)||(6716678-6716862)
chr7 (13-213)||(24324723-24324924)
chr7 (13-211)||(42533179-42533376)
chr7 (44-213)||(1320749-1320919)
chr7 (13-189)||(3478331-3478507)
chr7 (41-205)||(34389925-34390091)
chr7 (74-213)||(16954608-16954748)
chr7 (76-213)||(16828924-16829062)
chr7 (113-213)||(38306216-38306316)
chr7 (134-213)||(44755582-44755660)
chr7 (84-185)||(6584892-6584993)
chr7 (113-213)||(10244137-10244237)
chr7 (114-210)||(11379154-11379250)
chr7 (83-213)||(12480843-12480971)
chr7 (113-208)||(13311799-13311894)
chr7 (114-209)||(38485515-38485610)
chr7 (116-213)||(5860317-5860414)
chr7 (115-213)||(3419684-3419782)
chr7 (116-214)||(25160769-25160867)
chr7 (113-206)||(33435071-33435164)
chr7 (113-200)||(37794957-37795044)
chr7 (113-211)||(3867073-3867171)
chr7 (41-210)||(36449042-36449211)
chr7 (115-213)||(41089776-41089874)
chr7 (92-210)||(46133283-46133401)
chr7 (115-213)||(47325913-47326011)
chr7 (116-205)||(35745856-35745945)
chr7 (91-211)||(23983153-23983272)
chr7 (28-100)||(44755657-44755729)
[»] chr1 (23 HSPs)
chr1 (17-213)||(27102145-27102342)
chr1 (13-190)||(6583142-6583319)
chr1 (38-213)||(32864512-32864687)
chr1 (41-189)||(34774850-34774998)
chr1 (113-213)||(31585786-31585886)
chr1 (28-213)||(38544678-38544863)
chr1 (113-213)||(9313315-9313415)
chr1 (13-213)||(16147510-16147713)
chr1 (13-99)||(31290945-31291031)
chr1 (116-205)||(7857616-7857705)
chr1 (36-138)||(10785409-10785510)
chr1 (115-205)||(46814495-46814585)
chr1 (83-183)||(17033571-17033672)
chr1 (113-213)||(41920408-41920507)
chr1 (41-205)||(24658892-24659058)
chr1 (113-206)||(5389447-5389540)
chr1 (113-214)||(24449956-24450057)
chr1 (113-206)||(46692845-46692938)
chr1 (114-209)||(4651739-4651834)
chr1 (86-208)||(42374123-42374246)
chr1 (115-205)||(27031868-27031958)
chr1 (65-207)||(50589185-50589327)
chr1 (113-206)||(24684504-24684597)
[»] chr6 (12 HSPs)
chr6 (13-213)||(20701729-20701929)
chr6 (11-213)||(3880522-3880709)
chr6 (27-189)||(32935279-32935441)
chr6 (28-212)||(26534656-26534842)
chr6 (41-103)||(15120551-15120613)
chr6 (85-213)||(21266070-21266196)
chr6 (113-213)||(3117448-3117548)
chr6 (28-143)||(13423491-13423606)
chr6 (113-211)||(16510327-16510425)
chr6 (112-150)||(34105431-34105469)
chr6 (84-213)||(9223997-9224125)
chr6 (113-150)||(26216045-26216082)
[»] chr5 (18 HSPs)
chr5 (20-211)||(14302363-14302554)
chr5 (13-213)||(8297423-8297623)
chr5 (62-209)||(13954209-13954355)
chr5 (41-213)||(7391991-7392157)
chr5 (14-209)||(7195167-7195360)
chr5 (36-213)||(33258831-33259008)
chr5 (13-213)||(26045890-26046090)
chr5 (28-150)||(21402778-21402900)
chr5 (91-213)||(39024454-39024575)
chr5 (113-208)||(31721637-31721732)
chr5 (113-206)||(34378060-34378153)
chr5 (83-209)||(39184181-39184309)
chr5 (113-209)||(24072292-24072388)
chr5 (41-210)||(8730875-8731045)
chr5 (116-210)||(17854096-17854190)
chr5 (116-213)||(698316-698413)
chr5 (85-138)||(22675322-22675375)
chr5 (113-213)||(18593198-18593298)
[»] chr3 (20 HSPs)
chr3 (13-213)||(25647639-25647841)
chr3 (13-188)||(14879415-14879591)
chr3 (8-213)||(37123337-37123541)
chr3 (27-213)||(14755204-14755389)
chr3 (69-213)||(14193894-14194041)
chr3 (41-143)||(33143902-33144005)
chr3 (41-205)||(23328302-23328468)
chr3 (83-209)||(30935386-30935512)
chr3 (44-150)||(39021234-39021339)
chr3 (84-205)||(47945668-47945790)
chr3 (11-99)||(28937638-28937726)
chr3 (113-213)||(20611738-20611838)
chr3 (28-150)||(1652827-1652949)
chr3 (155-213)||(4464004-4464061)
chr3 (113-213)||(19176458-19176557)
chr3 (113-211)||(823461-823559)
chr3 (43-208)||(5556530-5556696)
chr3 (116-206)||(34475783-34475873)
chr3 (113-150)||(17550975-17551012)
chr3 (55-150)||(45163873-45163969)
[»] scaffold0200 (1 HSPs)
scaffold0200 (36-213)||(19338-19515)
[»] chr2 (22 HSPs)
chr2 (13-209)||(37770568-37770763)
chr2 (36-213)||(1269438-1269615)
chr2 (15-213)||(13337229-13337427)
chr2 (13-171)||(34230198-34230356)
chr2 (11-205)||(41086721-41086905)
chr2 (13-210)||(10173503-10173701)
chr2 (22-143)||(7695988-7696108)
chr2 (13-138)||(16952308-16952434)
chr2 (13-138)||(17022973-17023099)
chr2 (13-138)||(17060279-17060405)
chr2 (115-213)||(14106552-14106650)
chr2 (115-205)||(7874254-7874344)
chr2 (113-213)||(39338891-39338991)
chr2 (91-150)||(22885137-22885196)
chr2 (41-210)||(25504862-25505032)
chr2 (84-210)||(18681023-18681149)
chr2 (123-210)||(17105369-17105457)
chr2 (115-205)||(14405162-14405251)
chr2 (116-213)||(10524052-10524149)
chr2 (83-139)||(2062918-2062974)
chr2 (86-150)||(16960000-16960064)
chr2 (86-206)||(31902413-31902533)
[»] scaffold0063 (1 HSPs)
scaffold0063 (13-213)||(58082-58282)
[»] chr8 (17 HSPs)
chr8 (13-213)||(17656928-17657127)
chr8 (28-213)||(10248494-10248679)
chr8 (83-210)||(30236124-30236251)
chr8 (37-211)||(15906643-15906818)
chr8 (115-205)||(15821407-15821497)
chr8 (113-213)||(9519454-9519554)
chr8 (113-213)||(37986884-37986984)
chr8 (13-189)||(12197994-12198171)
chr8 (13-189)||(12442422-12442599)
chr8 (113-213)||(24995421-24995521)
chr8 (113-213)||(36630792-36630892)
chr8 (115-213)||(32066323-32066421)
chr8 (104-152)||(23264722-23264770)
chr8 (113-213)||(31207388-31207487)
chr8 (113-213)||(34389031-34389131)
chr8 (82-184)||(10552253-10552354)
chr8 (65-143)||(32945681-32945759)
[»] scaffold0119 (1 HSPs)
scaffold0119 (36-213)||(42087-42264)
[»] scaffold0050 (1 HSPs)
scaffold0050 (13-213)||(36662-36864)
[»] scaffold1613 (1 HSPs)
scaffold1613 (28-213)||(957-1142)
[»] scaffold0068 (1 HSPs)
scaffold0068 (116-213)||(35800-35897)
[»] scaffold0062 (1 HSPs)
scaffold0062 (167-209)||(47052-47094)


Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 48098488 - 48098288
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  48098488 aaaagctcctatctgaaagatcgttcatcttccaccacctctcgaccttcgatccatcgaaagaaactataaaaagcccaaaaccaaacttaatccaaca 48098389  T
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  48098388 aactgactcccgatctcgaaacaaaagtgataggcccatcgggctttatgaccaaatcagaagggcacctctcaccctcggtacacctgagaaacaccaa 48098289  T
Q  213 a 213  Q
    |    
T  48098288 a 48098288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 212
Target Start/End: Original strand, 53823362 - 53823546
Alignment:
Q  28 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatc 127  Q
    |||||||  ||| |||||||||||||| ||||||||||| |||||||||||| ||||||| | ||||||||||||| | ||||  |||||||||||||||    
T  53823362 aaagatcaatcaacttccaccacctctcgaccttcgatcaaccgaaagaaaccataaaaaacccaaaaccaaacttgagccaaagaactgactcccgatc 53823461  T
Q  128 tcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    ||||| |||||||||| || ||| |  ||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  53823462 tcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcacccctcacctccggtacaccagagaaacaccaa 53823546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 25753313 - 25753129
Alignment:
Q  27 gaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgat 126  Q
    |||||||| |||| |||||||  ||| | ||||| |||||||||||||||||| ||||||||| ||||| ||||||| | ||||  ||||||||||||||    
T  25753313 gaaagatcattcagcttccactgcctatcgacctccgatccaccgaaagaaacaataaaaagcccaaaatcaaacttgagccaaagaactgactcccgat 25753214  T
Q  127 ctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacca 211  Q
    |||||| |||||||||| | |||| |  |||||| |||||||| ||| |||||| |||||||  | |||||||||||||||||||    
T  25753213 ctcgaatcaaaagtgatcgccccaccagactttaggaccaaataagacgggcactcctcacctccggtacaccagagaaacacca 25753129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 39420939 - 39421139
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    |||||||| ||||||||| |||  |||  ||||||||||||| || || ||||||||||||| |||| ||||||||| ||||||||||  | ||| ||      
T  39420939 aaaagctcctatctgaaatatcaatcagtttccaccacctctcgatctccgatccaccgaaaaaaaccataaaaagcccaaaaccaaaactgatctaagg 39421038  T
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    || ||||||||||||||||| |||||||||| |||||| |   || || ||||| |||||||||||||||||||||||| |||||  |||||||||||||    
T  39421039 aattgactcccgatctcgaatcaaaagtgatcggcccaccaggctataagaccatatcagaagggcacccctcaccctcagtacattagagaaacaccaa 39421138  T
Q  213 a 213  Q
    |    
T  39421139 a 39421139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 22811109 - 22811285
Alignment:
Q  36 ttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaaca 135  Q
    |||| ||||||||||||||  |||| | ||||| ||| |||||| |||||||||  |||||||||||| | ||||  ||||||||||||||||||||  |    
T  22811109 ttcaacttccaccacctctcaacctccaatccatcgagagaaaccataaaaagcctaaaaccaaacttgagccaaagaactgactcccgatctcgaataa 22811208  T
Q  136 aaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||| |||| |||||| |  |||||| ||||||||||||||||||| |||||||| |  ||||||||||||||||||||    
T  22811209 aaaatgatcggcccaccagactttaagaccaaatcagaagggcactcctcaccc-cgatacaccagagaaacaccaaa 22811285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 38637160 - 38637353
Alignment:
Q  14 aaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaa 113  Q
    ||||||| ||||||||||||| |||| |||||||||||||| ||||| ||||||||| |||||||| ||||||||| |||||||  |||||| ||||  |    
T  38637160 aaagctcttatctgaaagatcattcagcttccaccacctctcgacctccgatccaccaaaagaaaccataaaaagcccaaaacc-tacttaagccaaaga 38637258  T
Q  114 actgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctct-gtacaccagagaaacac 209  Q
    | ||||||||||||||||| |||||||||| |||||  |  ||| |||| |||||  || ||||||||| ||| ||||| |||||||||||||||||    
T  38637259 attgactcccgatctcgaatcaaaagtgatcggcccgccagactatatgcccaaa-aaggagggcacccatca-cctctggtacaccagagaaacac 38637353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 2061677 - 2061858
Alignment:
Q  26 tgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccga 125  Q
    ||||||||| |||| |||||||||||||| ||||| |||||||||||||||||  || |||||| ||||| ||||  | ||||||  ||||||||| | |    
T  2061677 tgaaagatcattcaacttccaccacctctcgacctccgatccaccgaaagaaatcatcaaaagcccaaaatcaaaactgatccaaagaactgactctcaa 2061776  T
Q  126 tctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaac 207  Q
    ||||||| ||||||||||  ||||| |  |||||| || |||||||  ||||||||||||||| ||  ||||||||||||||    
T  2061777 tctcgaatcaaaagtgatcagcccaccagactttaggatcaaatcaagagggcacccctcaccttcgatacaccagagaaac 2061858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 16832947 - 16833077
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    |||||||||||||  ||||||| |||| |||| | ||||||||||| | ||| |||| ||||||||| ||||||||| |||| |||||||| ||||||||    
T  16832947 aaaagctcatatcccaaagatcattcagcttcaatcacctcttgacttccgaaccactgaaagaaaccataaaaagcccaaatccaaacttgatccaaca 16833046  T
Q  113 aactgactcccgatctcgaaacaaaagtgat 143  Q
    || ||||| ||||||||||| ||||||||||    
T  16833047 aaatgacttccgatctcgaatcaaaagtgat 16833077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 49747683 - 49747483
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccacca-cctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaac 111  Q
    |||||||||||| ||||||||| |||| | | ||||| ||| |  ||||||||||||| ||||||| | ||||||||| ||||||||||||| ||| ||     
T  49747683 aaaagctcatatatgaaagatcattcaacctacaccaacctatcaaccttcgatccacagaaagaacccataaaaagctcaaaaccaaacttgatcaaaa 49747584  T
Q  112 aaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacca 211  Q
     ||||||||| ||||||| || |||||||||| ||| || |  ||||||  ||||||||| |||||| ||  |||||||  ||||| |||||||||||||    
T  49747583 gaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaatcaaaagggcgccattcaccct-ggtacatcagagaaacacca 49747485  T
Q  212 aa 213  Q
    ||    
T  49747484 aa 49747483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 41117894 - 41118023
Alignment:
Q  14 aaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaa 113  Q
    ||||||| |||  |||||||| |||| |||||||||||||| |||||  |||||| |||||||||| ||||||||| ||||||| || || | ||||  |    
T  41117894 aaagctcctattcgaaagatcattcagcttccaccacctctcgacctctgatccatcgaaagaaaccataaaaagcccaaaacctaatttgagccaaaga 41117993  T
Q  114 actgactcccgatctcgaaacaaaagtgat 143  Q
    ||| ||| ||||||||||| ||||||||||    
T  41117994 acttacttccgatctcgaatcaaaagtgat 41118023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 49528218 - 49528143
Alignment:
Q  22 tatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaacc 97  Q
    |||| |||||||| ||||||||||||||||||  ||||| |||||||||||||||||| ||||||||| |||||||    
T  49528218 tatccgaaagatcattcatcttccaccacctcccgacctccgatccaccgaaagaaaccataaaaagcccaaaacc 49528143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 2825831 - 2825746
Alignment:
Q  120 tcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaa 205  Q
    ||||||||||||| ||||| |||| |||||| || ||||||  |||||||||| || ||||||||| ||||| |||||||||||||    
T  2825831 tcccgatctcgaatcaaaaatgatcggcccaccggactttagaaccaaatcagcagagcacccctcgccctcggtacaccagagaa 2825746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 30964492 - 30964396
Alignment:
Q  117 gactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||||||||||| |||| |||||||||| ||||||||  | | ||  ||||||| || |||||||||||| ||||| |||||||||||||| ||||||    
T  30964492 gactcccgatcacgaatcaaaagtgatcggcccatcagattatagtaccaaattagcagggcacccctcgccctcggtacaccagagaaaaaccaaa 30964396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 46698790 - 46698905
Alignment:
Q  92 aaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctc 191  Q
    ||||| |||||| | ||||  |||||||||||||||||||| ||||||  || |||||| |  |||  | |||||||||||||||||||||| |||||||    
T  46698790 aaaacaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggaccaaatcagaagggcaccccacaccctc 46698889  T
Q  192 tgtacaccagagaaac 207  Q
     || ||||| ||||||    
T  46698890 ggtccaccaaagaaac 46698905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 8255082 - 8254982
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||| | ||||||| | |||||||||| |||||| |  ||||||  ||||||| || |||||||||||| ||| | |||||||||||||| |||||    
T  8255082 aactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaa 8254983  T
Q  213 a 213  Q
    |    
T  8254982 a 8254982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 8268500 - 8268400
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||| | ||||||| | |||||||||| |||||| |  ||||||  ||||||| || |||||||||||| ||| | |||||||||||||| |||||    
T  8268500 aactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaa 8268401  T
Q  213 a 213  Q
    |    
T  8268400 a 8268400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 19815250 - 19815326
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccc 189  Q
    |||||||||| |||||||||  |||||| || || ||| |  |||||| ||||||| ||||||||||||||||||||    
T  19815250 aactgactcctgatctcgaataaaaagtaatcggtccaccagactttaggaccaaaacagaagggcacccctcaccc 19815326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 16501816 - 16501688
Alignment:
Q  83 aaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcaccc 182  Q
    ||||||| ||||||||||||  | ||||  | |||||||||||||||||| |||||| ||| |||||| | ||||| | || |||||| ||||| ||  |    
T  16501816 aaaaagcccaaaaccaaactagaaccaaagagctgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcaggatcaaatcggaaggcca--c 16501719  T
Q  183 ctcaccctctgtacaccagagaaacaccaaa 213  Q
    | ||||| | |  ||||||||||||||||||    
T  16501718 cacacccccggaccaccagagaaacaccaaa 16501688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 31050697 - 31050760
Alignment:
Q  122 ccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctc 185  Q
    ||||||||||| |||||||||| |||||| |  ||||||  |||||||||| ||||||||||||    
T  31050697 ccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagtagggcacccctc 31050760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 3e-56; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 13 - 211
Target Start/End: Complemental strand, 8745308 - 8745110
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    |||||||| ||||||||||||| | || ||||||| |||||| ||||| |||||||||||||||||| ||||||||| ||||||||||||| |||||||     
T  8745308 aaaagctcctatctgaaagatcatgcagcttccacaacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgatccaacg 8745209  T
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacca 211  Q
    |||||| ||||||||||||| |||||||||| |||||| |  | |||| ||||||||||||||| |||||||||||||| || ||||||||||||||||    
T  8745208 aactgaatcccgatctcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccctcaccctcggtgcaccagagaaacacca 8745110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 213
Target Start/End: Original strand, 6716678 - 6716862
Alignment:
Q  28 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatc 127  Q
    |||||||  ||| |||||||||||||| ||| |||||||||||||||||||| ||||||| | ||| ||||||||| | ||||  |||||||||||||||    
T  6716678 aaagatcaatcagcttccaccacctctcgac-ttcgatccaccgaaagaaaccataaaaaacccaagaccaaacttgagccaaagaactgactcccgatc 6716776  T
Q  128 tcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||||| |||||||||| |||| | |  |||||||||  |||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  6716777 tcgaatcaaaagtgatcggccaaccagactttatgattaaatcagaagggcacccctcactctcggtacaccagagaaacatcaaa 6716862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 24324723 - 24324924
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaa-cttaatccaac 111  Q
    |||||||| || | |||||||| |||| ||||||||||| || ||||| ||||||||| |||||||| ||||||||| |||||||||| ||| | ||||     
T  24324723 aaaagctcctaaccgaaagatcattcagcttccaccacccctcgacctccgatccacctaaagaaaccataaaaagcccaaaaccaaaacttgagccaaa 24324822  T
Q  112 aaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacca 211  Q
     || ||||||||||||||||| ||||| |||| |||||| | ||||||| ||||||||||||||||||||||| | || | |||||||| ||||||||||    
T  24324823 gaattgactcccgatctcgaatcaaaattgatcggcccaccaaactttaagaccaaatcagaagggcacccctaaaccccggtacaccaaagaaacacca 24324922  T
Q  212 aa 213  Q
    ||    
T  24324923 aa 24324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 42533179 - 42533376
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    |||||||| ||||||||||||||||||  | ||||||||||  |||||  ||||||||||||||||| ||||||||| |||| |||||||||| ||||      
T  42533179 aaaagctcttatctgaaagatcgttcagttgccaccacctcacgacctctgatccaccgaaagaaaccataaaaagcccaaa-ccaaacttaagccaaag 42533277  T
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacca 211  Q
     | ||||||||||||||||| ||||||||||  ||||| |  |||||| ||||||||||| |||||||||||||||| |  | ||||||||||||||||    
T  42533278 gattgactcccgatctcgaatcaaaagtgatcagcccaccagactttaggaccaaatcaggagggcacccctcacccccgatgcaccagagaaacacca 42533376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 44 - 213
Target Start/End: Complemental strand, 1320919 - 1320749
Alignment:
Q  44 ccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaa-cttaatccaacaaactgactcccgatctcgaaacaaaagtga 142  Q
    ||||| ||||| ||||| |||||||||||||||||| ||||||||| |||||||||| ||| | ||||  |||||||| ||||| | ||| |||||||||    
T  1320919 ccaccccctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaaacttgagccaaagaactgacttccgattttgaatcaaaagtga 1320820  T
Q  143 taggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    | |||||| |  ||||||||||||||||| ||||||||||||||||| |  |||| |||||||||||||||    
T  1320819 tcggcccaccagactttatgaccaaatcaaaagggcacccctcacccccgatacatcagagaaacaccaaa 1320749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 3478507 - 3478331
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaac 111  Q
    ||||| ||| ||| |||||||| |||| ||||| |||||||| || || |||||||||||||||| || | | ||||| |||||| || ||| | ||||     
T  3478507 aaaagttcacatccgaaagatcattcagcttccgccacctctcgatctccgatccaccgaaagaacacca-acaaagcccaaaactaatcttgagccaaa 3478409  T
Q  112 aaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccc 189  Q
     |||| ||||||||||||||| |||||||||| |||||| | ||||||| ||||||| ||||||||||||||||||||    
T  3478408 gaactaactcccgatctcgaatcaaaagtgatcggcccaccaaactttaggaccaaaacagaagggcacccctcaccc 3478331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 205
Target Start/End: Complemental strand, 34390091 - 34389925
Alignment:
Q  41 cttccaccacctcttgaccttcgatccaccgaaagaa-actata-aaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 138  Q
    ||||||| |||||| ||||| |||||||||||||||  || | | |||||| ||||| | ||||||| ||||  | |||||||||||||||||| |||||    
T  34390091 cttccacaacctctcgacctccgatccaccgaaagagcacaaaataaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaa 34389992  T
Q  139 gtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaa 205  Q
    ||||| |||||| |  ||||||  |||||||||| ||||||| |||||||| | |||||||||||||    
T  34389991 gtgatcggcccaccagactttaaaaccaaatcagcagggcactcctcacccccagtacaccagagaa 34389925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 74 - 213
Target Start/End: Complemental strand, 16954748 - 16954608
Alignment:
Q  74 agaaactataaaaagcacaaaaccaaa-cttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcag 172  Q
    |||||| ||||||||| |||||||||| ||| |  |||  ||||||||  ||||||||||||||||||||| || | | |  |||||| |||||||||||    
T  16954748 agaaaccataaaaagcccaaaaccaaaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaatcag 16954649  T
Q  173 aagggcacccctcaccctctg-tacaccagagaaacaccaaa 213  Q
    |||||||||||||| |||||| ||||||||||||| ||||||    
T  16954648 aagggcacccctca-cctctgatacaccagagaaagaccaaa 16954608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 213
Target Start/End: Original strand, 16828924 - 16829062
Alignment:
Q  76 aaactataaaaagcacaaaaccaaa-cttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaa 174  Q
    |||| ||||||||| |||||||||| ||| |  |||  ||||||||  |||||||||||||||||||||  ||| | |  |||||| |||||||||||||    
T  16828924 aaaccataaaaagcccaaaaccaaaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaa 16829023  T
Q  175 gggcacccctcaccctctg-tacaccagagaaacaccaaa 213  Q
    ||||||||||||||| ||| ||||| ||||||||||||||    
T  16829024 gggcacccctcaccc-ctgatacactagagaaacaccaaa 16829062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 38306316 - 38306216
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    ||||||||||| |||||||| |||||||||| |||||| |  ||| ||  ||||||| || |||||||||||| ||| |||||||||||||||| |||||    
T  38306316 aactgactcccaatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcgccccctgtacaccagagaaaaaccaa 38306217  T
Q  213 a 213  Q
    |    
T  38306216 a 38306216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 44755660 - 44755582
Alignment:
Q  134 caaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||||||| |||||| |  |||||| ||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  44755660 caaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctca-ccacggtacaccagagaaacaccaaa 44755582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 6584993 - 6584892
Alignment:
Q  84 aaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccc 183  Q
    |||||| ||||| | ||||||| ||||  | |||||||||||||||||| |||||||||| |||||| |  ||||||  |||||||||| ||||||||||    
T  6584993 aaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccc 6584894  T
Q  184 tc 185  Q
    ||    
T  6584893 tc 6584892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 10244237 - 10244137
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| |||||||||| |||||| |  | | ||  ||||||| || |||||||||||| ||| | |||||||||||||| |||||    
T  10244237 aactgactcccgatctcgaatcaaaagtgatcggcccaccagattatagcaccaaattagcagggcacccctctcccccggtacaccagagaaaaaccaa 10244138  T
Q  213 a 213  Q
    |    
T  10244137 a 10244137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 11379154 - 11379250
Alignment:
Q  114 actgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacc 210  Q
    ||||||||||||||||||| |||||| ||| ||| || |  |||  |||||||||| |||||||||||||  |||||| || |||||||||||||||    
T  11379154 actgactcccgatctcgaatcaaaagcgatcggctcaccagactacatgaccaaattagaagggcaccccaaaccctcggtccaccagagaaacacc 11379250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 12480971 - 12480843
Alignment:
Q  83 aaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcaccc 182  Q
    |||||||  |||||||||||| | ||||  |||||||||||||||||||| |||||| ||| |||||| | ||||| | ||| ||||||||||| ||  |    
T  12480971 aaaaagccaaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcaggacaaaatcagaaggcca--c 12480874  T
Q  183 ctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||||||| | || |||  |||||||||||||    
T  12480873 ctcacccccggtccacgtgagaaacaccaaa 12480843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 208
Target Start/End: Complemental strand, 13311894 - 13311799
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaaca 208  Q
    |||||||||||||||||||| |||||||||| |||||| |  |||  ||||||||| |||| |||||||||| | || | || |||||||||||||    
T  13311894 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactacatgaccaaaccagacgggcaccccttatccccggtccaccagagaaaca 13311799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 38485610 - 38485515
Alignment:
Q  114 actgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacac 209  Q
    ||||||||||||||||||| |||||||||| |||||| |  |||| |  || || |||||||||||||||| |||| | || ||||||||||||||    
T  38485610 actgactcccgatctcgaatcaaaagtgatcggcccaccagacttcagaacaaattcagaagggcaccccttacccccagtccaccagagaaacac 38485515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 5860317 - 5860414
Alignment:
Q  116 tgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||||||||||||||||| |||||| |||||||||| || ||| ||  ||||||| || |||||||||||| ||| | |||||  ||||||| ||||||    
T  5860317 tgactcccgatctcgaatcaaaagcgataggcccaccggactatagtaccaaattagcagggcacccctcgcccccggtacagtagagaaaaaccaaa 5860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 3419684 - 3419782
Alignment:
Q  115 ctgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||||||||||||||| ||||||||||  ||||| |  ||||||  ||||||| |  |||||||||||| ||| | ||| |||||||||| ||||||    
T  3419684 ctgactcccgatctcgaatcaaaagtgatcagcccaccacactttagtaccaaattaacagggcacccctcgcccccggtataccagagaaaaaccaaa 3419782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 25160867 - 25160769
Alignment:
Q  116 tgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaac 214  Q
    ||||| ||||||||||| ||||||| || || ||| |  ||| ||  ||||||| || |||||||||||| ||||| |||||||||||||| |||||||    
T  25160867 tgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaaattagcagggcacccctcgccctcggtacaccagagaaaaaccaaac 25160769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 206
Target Start/End: Complemental strand, 33435164 - 33435071
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaa 206  Q
    |||||||||||||||||||| |||||||||| | | || |  ||||||  ||||||| |  |||||||||||| ||| | ||||||||||||||    
T  33435164 aactgactcccgatctcgaatcaaaagtgatcgtctcaccagactttagtaccaaattaacagggcacccctcgcccccggtacaccagagaaa 33435071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 37795044 - 37794957
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacacca 200  Q
    |||||||||||||||||||| ||||| |||  |||||| |  ||| ||| ||||||| || |||||||||||| ||| | ||||||||    
T  37795044 aactgactcccgatctcgaatcaaaactgaacggcccaccatactatattaccaaattagcagggcacccctcgcccccggtacacca 37794957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 3867171 - 3867073
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacca 211  Q
    |||||||||||| ||||||| ||||||||||  ||||| |  | ||||  ||||||| || ||| ||||| || ||||| |||||||||||||| ||||    
T  3867171 aactgactcccggtctcgaatcaaaagtgatcagcccaccatattttagtaccaaattagcaggccacccttcgccctcggtacaccagagaaaaacca 3867073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 36449211 - 36449042
Alignment:
Q  41 cttccaccacctcttgaccttcgatccaccgaaagaaa-ctataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaag 139  Q
    ||||||||||||||  |||| ||||||||||||||||| | | || |||  ||||||  ||||| | ||||  ||||||||||  ||||||||  ||||     
T  36449211 cttccaccacctctcaacctccgatccaccgaaagaaaaccaaaataagtccaaaacataacttgaaccaaagaactgactcctaatctcgaataaaaac 36449112  T
Q  140 tgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacc 210  Q
     |||| |||||    |||| | || ||||||||||||||||||||||||| |  | |||||||||||||||    
T  36449111 -gataagcccactagacttcaagatcaaatcagaagggcacccctcacccccgatccaccagagaaacacc 36449042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 41089776 - 41089874
Alignment:
Q  115 ctgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||||||||| |||||||| |||||||||| || ||| |  ||||||  ||||||| || || ||||||||| ||| |  ||||||||||||| ||||||    
T  41089776 ctgactcccaatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagagcacccctcgcccccgatacaccagagaaaaaccaaa 41089874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 46133283 - 46133401
Alignment:
Q  92 aaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctc 191  Q
    |||||||||||| | |||   ||||||||||||||||| || |||||| ||| ||| || |  |||| |  |||||||||||||||||| ||| |||  |    
T  46133283 aaaaccaaacttgaaccagagaactgactcccgatctcaaatcaaaagcgatcggctcaccagacttcagcaccaaatcagaagggcactcctaacctcc 46133382  T
Q  192 tgtacaccagagaaacacc 210  Q
     || |||||||||||||||    
T  46133383 ggtccaccagagaaacacc 46133401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 47325913 - 47326011
Alignment:
Q  115 ctgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||||||||||||||| || |||||| ||| |||||| |  ||| ||  ||||||| || | |||||||||| ||| | |||||||||||||| ||||||    
T  47325913 ctgactcccgatctcaaatcaaaagcgatcggcccaccagactatagtaccaaattagcaaggcacccctcgcccccggtacaccagagaaaaaccaaa 47326011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 35745856 - 35745945
Alignment:
Q  116 tgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaa 205  Q
    ||||| ||||||||||| ||||||||||  |||||||  ||||||  || |||| || |||||||||||| ||| | ||||| |||||||    
T  35745856 tgacttccgatctcgaatcaaaagtgatcagcccatcagactttagaacaaaattagtagggcacccctcgcccccggtacatcagagaa 35745945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 211
Target Start/End: Complemental strand, 23983272 - 23983153
Alignment:
Q  91 caaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccct 190  Q
    ||||||||||||| | | ||  || ||||||||||||||||| |||||  ||| | |||| |  |||| | |||||||| |||||| |||||||||||||    
T  23983272 caaaaccaaacttgagctaaggaattgactcccgatctcgaatcaaaaacgatcgacccaccagacttcaagaccaaattagaagg-cacccctcaccct 23983174  T
Q  191 ctgtacaccagagaaacacca 211  Q
    | || |||||||  |||||||    
T  23983173 cggtccaccagaagaacacca 23983153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 44755729 - 44755657
Alignment:
Q  28 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaa 100  Q
    ||||||| |||| |||||||||||| | |||||  |||  |||||||||||| ||||||||| ||||| ||||    
T  44755729 aaagatcattcagcttccaccacctatcgacctctgatataccgaaagaaaccataaaaagcccaaaatcaaa 44755657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 3e-53; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 27102342 - 27102145
Alignment:
Q  17 gctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaact 116  Q
    |||| ||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||  |||||||| ||||||||||||| ||||||  ||||    
T  27102342 gctcctatctgaaagatcattcagcttccaccacctctcgacctccgatccaccgaaagaaaccgtaaaaagcccaaaaccaaacttgatccaaagaact 27102243  T
Q  117 gactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggca-cccctcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||||||||||||| |||||||||| ||||| |   |||||  ||||||| |||||||||| |||||||||||| |||||||||||||||||||||    
T  27102242 gactcccgatctcgaatcaaaagtgatcggcccgttagactttgagaccaaaacagaagggcaccccctcaccctcggtacaccagagaaacaccaaa 27102145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 6583142 - 6583319
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    |||||||| |||||||||||||  ||| |||||||||||||| ||||| |||| ||||||||||||| |||||||||| |||||||||  | ||||||      
T  6583142 aaaagctcctatctgaaagatcaatcagcttccaccacctctcgacctccgattcaccgaaagaaaccataaaaagcaaaaaaccaaaactgatccaaag 6583241  T
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccct 190  Q
    || ||||| ||||||||||| |||||||||| || ||| |  |||||| ||||||||||||| |||||||||||||||    
T  6583242 aattgactgccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaaaggcacccctcaccct 6583319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 38 - 213
Target Start/End: Original strand, 32864512 - 32864687
Alignment:
Q  38 catcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaa 137  Q
    |||| |||||||||||  |||||  |||||||  |||||||| ||||||||| ||||||||||||| |  |||  ||| |||| |||||||||||  |||    
T  32864512 catcatccaccacctcccgacctctgatccacaaaaagaaaccataaaaagcccaaaaccaaacttgagtcaaagaaccgacttccgatctcgaattaaa 32864611  T
Q  138 agtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||| |||||| |   ||||| ||||||||| |||||||||||||||||||| ||| | |||| ||||||||||    
T  32864612 agtgattggcccaccagcctttaggaccaaatcggaagggcacccctcaccctcagtagatcagataaacaccaaa 32864687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 34774998 - 34774850
Alignment:
Q  41 cttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatcc-aacaaactgactcccgatctcgaaacaaaag 139  Q
    ||||||||||||||  |||| | || ||||||||||||| ||||||||| |||||| |||||| | || || ||||||||||||||||||| | ||||||    
T  34774998 cttccaccacctctcaacctccaattcaccgaaagaaaccataaaaagcccaaaactaaacttgagccaaaaaaactgactcccgatctcg-atcaaaag 34774900  T
Q  140 tgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccc 189  Q
    |||| || ||| |  || ||| |||||||||||||||||||| |||||||    
T  34774899 tgatcggtccaccagacgttaggaccaaatcagaagggcaccactcaccc 34774850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 31585786 - 31585886
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| |||||||||| |||||| |  ||| ||  ||||||| || |||||||||||||||||| |||||||||||||| |||||    
T  31585786 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcaccctcagtacaccagagaaaaaccaa 31585885  T
Q  213 a 213  Q
    |    
T  31585886 a 31585886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 213
Target Start/End: Original strand, 38544678 - 38544863
Alignment:
Q  28 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaa-cttaatccaacaaactgactcccga 125  Q
    |||||||  |||||||||||||| |||| | || |||| || ||| |||| |||| ||||| | |||||||||| ||||| ||||  |||||||||||||    
T  38544678 aaagatcaatcatcttccaccacttcttaatctccgattcatcgagagaacacta-aaaaacctcaaaaccaaaacttaaaccaaagaactgactcccga 38544776  T
Q  126 tctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||||||| |||||| ||| |||||| |  |||| |||||||||||||||||| ||||||||  | | || ||||||||||||||||||    
T  38544777 tctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtccaccagagaaacaccaaa 38544863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 9313315 - 9313415
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| ||||||||||  |||||    |||||| |||||||||||||||||||||||||| | |  ||||| |||||||||||||    
T  9313315 aactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcacccctcacgcccgatacacgagagaaacaccaa 9313414  T
Q  213 a 213  Q
    |    
T  9313415 a 9313415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 16147713 - 16147510
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaa--ctataaaaa-gcacaaaaccaaacttaatcca 109  Q
    |||||||||||||||||||||| |||| ||| ||||||||||  |||| ||||| |||||||||||  | ||||||| |  ||||| ||||||| | |||    
T  16147713 aaaagctcatatctgaaagatcattcaactttcaccacctctccacctccgatctaccgaaagaaataccataaaaaagtccaaaatcaaacttgaccca 16147614  T
Q  110 acaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacac 209  Q
    |  |||||||||||||| | ||| ||||| | || | |||| |  |||| | ||||||| |||||||| ||| ||||||| | |||| | ||||||||||    
T  16147613 aagaactgactcccgatattgaatcaaaattcatcgtcccaccatacttaacgaccaaaacagaagggaacctctcacccccggtacgctagagaaacac 16147514  T
Q  210 caaa 213  Q
    ||||    
T  16147513 caaa 16147510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 31290945 - 31291031
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaa 99  Q
    |||||||| |||| ||||||||   || |||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||||    
T  31290945 aaaagctcctatccgaaagatcaagcaacttccaccacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaa 31291031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 7857705 - 7857616
Alignment:
Q  116 tgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaa 205  Q
    ||||||||||||||||| |||||||||| |||||| |  ||||||  |||||||||| |||||||||||| ||| | |||||||||||||    
T  7857705 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgcccccagtacaccagagaa 7857616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 10785409 - 10785510
Alignment:
Q  36 ttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaaca 135  Q
    |||| |||||||||||||  ||||| ||| ||||||||| || | ||||||||| ||||||||||||| | ||||  |||||||||||||||||||| ||    
T  10785409 ttcagcttccaccacctcgcgacctccgaaccaccgaaaaaatc-ataaaaagcccaaaaccaaacttgagccaaacaactgactcccgatctcgaagca 10785507  T
Q  136 aaa 138  Q
    |||    
T  10785508 aaa 10785510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 46814495 - 46814585
Alignment:
Q  115 ctgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaa 205  Q
    |||||||||||||||||| |||||||||| |||||| |  ||||||  |||||||||| |||||||||||  ||| | |||||||||||||    
T  46814495 ctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaa 46814585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 17033672 - 17033571
Alignment:
Q  83 aaaaagcacaaaaccaaa-cttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacc 181  Q
    ||||||| |||||||||| ||| | ||||  |||||||||||||||||||  |||||||||| |||||| |  ||| || ||||||||||||||||||||    
T  17033672 aaaaagcccaaaaccaaaacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcacc 17033573  T
Q  182 cc 183  Q
    ||    
T  17033572 cc 17033571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 41920507 - 41920408
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| |||||||||| |||||| |  ||| ||  ||||||| || |||||||||||| ||| | |||||||||||||| |||||    
T  41920507 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactgtagtaccaaattagcagggcacccctcgccc-cagtacaccagagaaaaaccaa 41920409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 205
Target Start/End: Complemental strand, 24659058 - 24658892
Alignment:
Q  41 cttccaccacctcttgaccttcgatccaccgaaagaaactataa--aaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 138  Q
    ||||||| |||||| ||||| |||||||||||||||    | ||  ||||| ||||| | ||||| | ||||  | |||||||||||||||||| |||||    
T  24659058 cttccacaacctctcgacctccgatccaccgaaagagcacaaaaccaaagcccaaaaaccaacttcagccaaagagctgactcccgatctcgaatcaaaa 24658959  T
Q  139 gtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaa 205  Q
    ||||| |||||| |  ||||||  |||||||||| |||||||||||  ||| |  ||||||||||||    
T  24658958 gtgattggcccaccagactttagaaccaaatcagcagggcaccccttgcccccgatacaccagagaa 24658892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 5389447 - 5389540
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaa 206  Q
    |||||||||||||||||||| |||||||||| ||||| ||  ||| ||  ||||||| ||  ||||||||||| ||| | ||||||||||||||    
T  5389447 aactgactcccgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccctcgcccccggtacaccagagaaa 5389540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 24449956 - 24450057
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||| |||||||| || |||||||||| |||||| | |||| ||  ||||||  || |||||||||||| ||| | |||||||||||||| |||||    
T  24449956 aactgacttccgatctcaaatcaaaagtgatcggcccaccaaactatagtaccaaaatagcagggcacccctcgcccccggtacaccagagaaaaaccaa 24450055  T
Q  213 ac 214  Q
    ||    
T  24450056 ac 24450057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 46692845 - 46692938
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaa 206  Q
    |||| ||||||||||||||| |||||||||| |||||| |  ||| ||| ||||||| || |||||||| ||| ||| | ||||||||||||||    
T  46692845 aactaactcccgatctcgaatcaaaagtgatcggcccaccagactatatcaccaaattagcagggcacctctcgcccccggtacaccagagaaa 46692938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 4651834 - 4651739
Alignment:
Q  114 actgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacac 209  Q
    ||||||||||||||||||| |||||||||| |||||  |  ||||    || || |||||||||||||||| |||| | |||||||||||||||||    
T  4651834 actgactcccgatctcgaatcaaaagtgatcggccccccagacttcggaacaaattcagaagggcaccccttacccccggtacaccagagaaacac 4651739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 208
Target Start/End: Complemental strand, 42374246 - 42374123
Alignment:
Q  86 aagcacaaaaccaaa-cttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccct 184  Q
    |||| |||||||||| ||| | |||| | |||||||||||||||| || |||||| ||| || ||| |  ||   ||||||||||||||||||||||||     
T  42374246 aagcccaaaaccaaaacttgaaccaaaagactgactcccgatctcaaatcaaaagcgatcggtccaccagacaacatgaccaaatcagaagggcacccca 42374147  T
Q  185 caccctctgtacaccagagaaaca 208  Q
     |||||| |||||||| |||||||    
T  42374146 aaccctcggtacaccaaagaaaca 42374123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 27031868 - 27031958
Alignment:
Q  115 ctgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaa 205  Q
    ||||||| |||||||||| |||||||||| ||||||    ||||||  |||||||||| |||||||||||  ||| | |||||||||||||    
T  27031868 ctgactctcgatctcgaatcaaaagtgatcggcccactagactttagaaccaaatcagcagggcacccctttcccccggtacaccagagaa 27031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 207
Target Start/End: Original strand, 50589185 - 50589327
Alignment:
Q  65 tccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatga 163  Q
    ||||||||||||| |||| || |||| |||||||||||||   ||||  ||||| |||||||| ||||| |||||| |||  ||||| || |||| | ||    
T  50589185 tccaccgaaagaacacta-aataagcccaaaaccaaacttgggccaaagaactggctcccgatttcgaatcaaaagcgatcagcccaccggacttcagga 50589283  T
Q  164 ccaaatcagaagggcacccctcaccctctgtacaccagagaaac 207  Q
    || || |||| |||||||||| |||| | || ||||||||||||    
T  50589284 cccaaccagacgggcaccccttacccccagtccaccagagaaac 50589327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 24684504 - 24684597
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaa 206  Q
    |||||||  |||||||||||  ||||||||| |||||| |  ||||||  | ||||| || |||||||||||| ||| | ||||||||||||||    
T  24684504 aactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtagggcacccctcgcccccggtacaccagagaaa 24684597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 3e-50; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 20701729 - 20701929
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    |||||||| |||| |||||||| |||| ||||||| |||||| ||||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||      
T  20701729 aaaagctcctatccgaaagatcattcagcttccactacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttaagccaaag 20701828  T
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||| ||||||||||||||| |||||||||| ||| || |   ||  |||||||||||||||||||||||||||||| | |||||||||||||| |||||    
T  20701829 aactaactcccgatctcgaatcaaaagtgatcggcacaccagtctaaatgaccaaatcagaagggcacccctcacccccggtacaccagagaaaaaccaa 20701928  T
Q  213 a 213  Q
    |    
T  20701929 a 20701929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 213
Target Start/End: Original strand, 3880522 - 3880709
Alignment:
Q  11 caaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaa 110  Q
    ||||||||||||||| |||||||  |||| ||||||||||| || ||||| |||||||| ||||||||| ||||||| | ||||||||||||| ||||||    
T  3880522 caaaaagctcatatccgaaagattattcaacttccaccaccactcgacctccgatccacggaaagaaaccataaaaatctcaaaaccaaacttgatccaa 3880621  T
Q  111 caaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacc 210  Q
                    |||||| |||||||||| |||||| | ||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  3880622 a---------------ctcgaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctctcaccctcggtaaaccagagaaacacc 3880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 189
Target Start/End: Original strand, 32935279 - 32935441
Alignment:
Q  27 gaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaa-tccaacaaactgactcccg 124  Q
    |||||||| | || |||||||||||||   ||||| || |||||||||||| |||| ||||||  ||||| ||||||| | ||||| || ||||||||||    
T  32935279 gaaagatcatgcagcttccaccacctcccaacctttgaaccaccgaaagaacacta-aaaaagtccaaaatcaaacttgagtccaagaa-ctgactcccg 32935376  T
Q  125 atctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccc 189  Q
    |||||||| |||||| ||| |||||| |  |||| | |||||||||||||||| |||||||||||    
T  32935377 atctcgaatcaaaagcgatcggcccaccagacttcaggaccaaatcagaagggaacccctcaccc 32935441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 212
Target Start/End: Original strand, 26534656 - 26534842
Alignment:
Q  28 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaacaaa---ctgactccc 123  Q
    |||||||  ||| ||||||||||| |   ||||||| ||||||||||||| ||   ||||||| ||||||||||||| | ||||  ||   |||||||||    
T  26534656 aaagatcaatcagcttccaccaccgcacaaccttcggtccaccgaaagaacacctaaaaaagcccaaaaccaaacttgaaccaaagaagaactgactccc 26534755  T
Q  124 gatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
     |||||||| |||||||||| |||||| |  |||| | ||||||||||||||| ||  |||||||| | ||  ||||||||||||||||    
T  26534756 aatctcgaatcaaaagtgatcggcccaccagacttcaggaccaaatcagaaggcca--cctcacccgcggtctaccagagaaacaccaa 26534842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 15120551 - 15120613
Alignment:
Q  41 cttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaactt 103  Q
    |||||||||||||| ||||| ||||||||| |||||||| ||||||||| |||||| ||||||    
T  15120551 cttccaccacctctcgacctccgatccaccaaaagaaaccataaaaagcccaaaactaaactt 15120613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 21266196 - 21266070
Alignment:
Q  85 aaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccct 184  Q
    ||||| ||||||||||||| | |||   |||| ||||||||||||||| |||||| ||| |||||| |   ||||| |||||||||| |||| ||  |||    
T  21266196 aaagcccaaaaccaaacttgaaccacataactaactcccgatctcgaatcaaaagcgatcggcccaccagtctttaggaccaaatcataaggcca--cct 21266099  T
Q  185 caccctctgtacaccagagaaacaccaaa 213  Q
    ||||||| ||  |||||||||||||||||    
T  21266098 caccctccgtttaccagagaaacaccaaa 21266070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 3117548 - 3117448
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||| ||| |||||||||| |||||| |  ||| ||| | ||||| || |||||||||||| ||| | | |||||||||||| |||||    
T  3117548 aactgactcccgatcttgaatcaaaagtgatcggcccaccatactatatcaacaaattagcagggcacccctcgcccccggaacaccagagaaaaaccaa 3117449  T
Q  213 a 213  Q
    |    
T  3117448 a 3117448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 13423606 - 13423491
Alignment:
Q  28 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatc 127  Q
    |||||||  ||| |||||||||||||  | ||| || |||| |||||||||| ||| ||||| || |||||||||| | ||||  ||| ||||| |||||    
T  13423606 aaagatcaatcagcttccaccacctcgcggcctccggtccatcgaaagaaaccatataaagcccataaccaaacttgagccaaagaaccgactctcgatc 13423507  T
Q  128 tcgaaacaaaagtgat 143  Q
    ||||| ||||||||||    
T  13423506 tcgaatcaaaagtgat 13423491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 16510327 - 16510425
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacca 211  Q
    ||||||||| | |||||||| |||||||||| ||||||    ||||||  ||||||| || |||||||||||  ||||| |||||||||||||| ||||    
T  16510327 aactgactctcaatctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcaccccttgccctcggtacaccagagaaaaacca 16510425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 150
Target Start/End: Complemental strand, 34105469 - 34105431
Alignment:
Q  112 aaactgactcccgatctcgaaacaaaagtgataggccca 150  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  34105469 aaactgactcccgatctcgaatcaaaagtgatcggccca 34105431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 213
Target Start/End: Complemental strand, 9224125 - 9223997
Alignment:
Q  84 aaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccc 183  Q
    |||||| ||||||||||  | | ||||  |||||||||||||||||||| |||||| |||  ||||| |  |||||| |||||| | | ||||||| |||    
T  9224125 aaaagcccaaaaccaaaactgaaccaaagaactgactcccgatctcgaatcaaaagcgatcagcccaccagactttaggaccaacttaaaagggca-ccc 9224027  T
Q  184 tcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||| | || ||||| || |||||||||    
T  9224026 tcacccccggtccaccaaaggaacaccaaa 9223997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 26216045 - 26216082
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggccca 150  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  26216045 aactgactcccgatctcgaatcaaaagtgatcggccca 26216082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 8e-45; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 14302363 - 14302554
Alignment:
Q  20 catatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgac 119  Q
    |||||| |||||||| | || |||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||||||||  |||||  |||||||    
T  14302363 catatccgaaagatcatgcagcttccaccacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgctccaaagaactgac 14302462  T
Q  120 tcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacca 211  Q
    |||| |||||||| ||||||||||  | ||| |  |||||| ||||||| |||||||||| |||||||||||  ||||||||||||||||||    
T  14302463 tcccaatctcgaaccaaaagtgatcagtccaccagactttaggaccaaaacagaagggcatccctcaccctcgatacaccagagaaacacca 14302554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 8297623 - 8297423
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    |||||||| |||| |||||| | |||| |||||||||||||  ||||| |||| ||||||||||||| ||||||||  ||||||||||||| | ||||      
T  8297623 aaaagctcctatccgaaagaccattcaacttccaccacctcacgacctccgattcaccgaaagaaaccataaaaagtccaaaaccaaacttgagccaaag 8297524  T
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| ||||| | ||  ||||| |   |||||  ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  8297523 aactgactcccgatctcgaatcaaaaattattagcccaccatgctttagaaccaaatcagaagggcacccctcaccctcggtacactagagaaacaccaa 8297424  T
Q  213 a 213  Q
    |    
T  8297423 a 8297423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 13954209 - 13954355
Alignment:
Q  62 cgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttat 161  Q
    |||||||||||||||||| ||||||||| ||||||||||||| | ||||   | ||||||||||||||||| |||||||||| |||||| |  ||||||     
T  13954209 cgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgagccaaagtaatgactcccgatctcgaatcaaaagtgatcggcccaccagactttag 13954308  T
Q  162 gaccaaatcagaagggcacccctcaccctctgtacaccagagaaacac 209  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||    
T  13954309 gaccaaatcagaa-ggcacccctcaccttcggtacaccagagaaacac 13954355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 213
Target Start/End: Original strand, 7391991 - 7392157
Alignment:
Q  41 cttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagt 140  Q
    |||| ||||||||| ||||| |||||||||||||||||| |||||| || |||||||||       ||||  |||||||||||||||||||| |||||||    
T  7391991 cttcaaccacctctcgacctccgatccaccgaaagaaaccataaaa-gcccaaaaccaatg-----ccaaagaactgactcccgatctcgaatcaaaagt 7392084  T
Q  141 gataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||| || ||| |  |||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  7392085 gatcggtccaccagactttaggaccaaatcagaagggcacccctcaccctcggtacatcagagaaacaccaaa 7392157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 7195167 - 7195360
Alignment:
Q  14 aaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaa 113  Q
    ||||||| ||||  ||||||  |||| ||||||| |||||| ||||| ||||||||||||| |||| |||||| || ||||  | ||||| | ||||  |    
T  7195167 aaagctcctatccaaaagattattcagcttccacgacctctcgacctccgatccaccgaaaaaaaccataaaa-gcccaaactctaacttgagccaaaga 7195265  T
Q  114 actgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacac 209  Q
    ||||||||||||||||||| |||||||||| ||| || |  |||||||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  7195266 actgactcccgatctcgaatcaaaagtgatcggctcaccagactttatggccaaatcagaagggcacccctcaccct-ggtacaccagagaaacac 7195360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 33258831 - 33259008
Alignment:
Q  36 ttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaaca 135  Q
    |||| ||||||| | |||| ||||| |||||||||||||||||| ||||||||| |||| |||| ||  | ||||  |||| ||||| ||||||||| ||    
T  33258831 ttcagcttccactatctctcgacctccgatccaccgaaagaaaccataaaaagcccaaatccaacctcgaaccaaagaactaactcctgatctcgaatca 33258930  T
Q  136 aaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||||| |||||| |  ||||||  |||||| ||||||| ||||||||||| || |||||||||||||||||||||    
T  33258931 aaagtgatcggcccaccagactttagcaccaaaacagaaggacacccctcaccttcggtacaccagagaaacaccaaa 33259008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 26045890 - 26046090
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    ||||||||||||||||||||||  ||| |||||||  |||   ||||| |||||| |||| |||||| ||||||||  ||||||||||||| | |||| |    
T  26045890 aaaagctcatatctgaaagatcaatcagcttccacagcctaacgacctccgatcccccgagagaaaccataaaaagtccaaaaccaaacttgagccaaaa 26045989  T
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaa-tcagaagggcacccctcaccctctgtacaccagagaaacacca 211  Q
     ||| ||||||||||||||| |||||||||| ||  || |  |||||| ||||||| ||| || ||||||||| | || | |||||||||||||||||||    
T  26045990 cactaactcccgatctcgaatcaaaagtgatcggttcaccagactttaggaccaaactcaaaaaggcaccccttaacc-cggtacaccagagaaacacca 26046088  T
Q  212 aa 213  Q
    ||    
T  26046089 aa 26046090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 21402778 - 21402900
Alignment:
Q  28 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatc 127  Q
    |||||||  ||| ||||||||||||||  |||| | |||||||||||||||| ||||||||| ||||||||||| | |  |||  |||||||||||||||    
T  21402778 aaagatcaatcaacttccaccacctctcaacctccaatccaccgaaagaaaccataaaaagctcaaaaccaaacctgagtcaaagaactgactcccgatc 21402877  T
Q  128 tcgaaacaaaagtgataggccca 150  Q
    |||||  ||||||||| ||||||    
T  21402878 tcgaactaaaagtgatcggccca 21402900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 213
Target Start/End: Original strand, 39024454 - 39024575
Alignment:
Q  91 caaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccct 190  Q
    ||||||||||||| | ||||  || ||||||||||||||||| |||||| ||| |  ||| | ||||| | |||||| ||||||||||| ||||||||||    
T  39024454 caaaaccaaacttgaaccaaagaagtgactcccgatctcgaatcaaaagcgattgagccaccaaacttcaggaccaactcagaagggca-ccctcaccct 39024552  T
Q  191 ctgtacaccagagaaacaccaaa 213  Q
    | || |||||||||||| |||||    
T  39024553 cagtccaccagagaaacgccaaa 39024575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 208
Target Start/End: Complemental strand, 31721732 - 31721637
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaaca 208  Q
    |||||||||||||||||||| |||||| ||| |||||||   |||| |  |||| ||||||||||||||||| |||| | || |||||||||||||    
T  31721732 aactgactcccgatctcgaatcaaaagcgatcggcccattagacttcagaaccacatcagaagggcaccccttacccccggtccaccagagaaaca 31721637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 206
Target Start/End: Complemental strand, 34378153 - 34378060
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaa 206  Q
    |||||||||||||||||||| |||||||||| |||||| |  ||||||  ||||||| || ||||||| |||  ||| | ||||||||||||||    
T  34378153 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcactccttgcccccggtacaccagagaaa 34378060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 39184181 - 39184309
Alignment:
Q  83 aaaaagcacaaaaccaaa--cttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcac 180  Q
    ||||||| ||||||||||  ||| | ||||  |||||||| ||||||||||| |||||||||| |||||| |  ||   |||| ||||||||||||||||    
T  39184181 aaaaagctcaaaaccaaatgcttgaaccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagaccacatgatcaaatcagaagggcac 39184280  T
Q  181 ccctcaccctctgtacaccagagaaacac 209  Q
    |||  ||| || || ||||||||||||||    
T  39184281 cccaaaccgtcggttcaccagagaaacac 39184309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 24072292 - 24072388
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacac 209  Q
    |||||||| |||||||| || |||||| |||  ||| | |  |||||| ||||||||||||||||||||||  |||||| || ||||||||||||||    
T  24072292 aactgacttccgatctcaaatcaaaagcgatcagccaaccagactttaggaccaaatcagaagggcaccccaaaccctcggtccaccagagaaacac 24072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 210
Target Start/End: Complemental strand, 8731045 - 8730875
Alignment:
Q  41 cttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaa-cttaatccaacaaactgactcccgatctcgaaacaaaa 138  Q
    ||||||||||||||  ||||||| |||| |||||||| || | ||||||| |||||||||| | | | ||||  ||||||||||||||||||||  ||||    
T  8731045 cttccaccacctctgaaccttcggtccatcgaaagaacacca-aaaaagcccaaaaccaaaacctgaaccaaagaactgactcccgatctcgaattaaaa 8730947  T
Q  139 gtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacc 210  Q
    | |||||| ||| |  |||  | |||||||||| |||||||||||| | |||| || ||||| || ||||||    
T  8730946 gcgataggtccaccagactgcaagaccaaatcataagggcaccccttatcctcagtccaccataggaacacc 8730875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 17854096 - 17854190
Alignment:
Q  116 tgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacc 210  Q
    ||||||||||||||||  |||||| | | |||||| |  |||| | |||||||| ||||||||||||||||||| | || |||||||| ||||||    
T  17854096 tgactcccgatctcgagtcaaaagcggtcggcccaccatacttcaagaccaaattagaagggcacccctcacccccggtccaccagaggaacacc 17854190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 698413 - 698316
Alignment:
Q  116 tgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||||||||||||||||| |||||| ||| || ||| |  ||| ||  ||||||| || |||||||||||| ||| | |||||||||||||| ||||||    
T  698413 tgactcccgatctcgaatcaaaagagatcggtccaccagactatagcaccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaa 698316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 22675322 - 22675375
Alignment:
Q  85 aaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 138  Q
    ||||| ||||||||||||| | ||||  |||||||||||||||||||| |||||    
T  22675322 aaagcccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaa 22675375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 18593298 - 18593198
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||| ||||||||||||||| ||||||||||  |||||   |||| ||  ||||||| || |||||| ||||| ||| | |||||| ||||||| |||||    
T  18593298 aactaactcccgatctcgaatcaaaagtgatctgcccactaaactatagcaccaaattagcagggcatccctcgcccccggtacacgagagaaaaaccaa 18593199  T
Q  213 a 213  Q
    |    
T  18593198 a 18593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 25647841 - 25647639
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaa--cttaatccaa 110  Q
    ||||||||||| | |||||||| |||| ||| |||||||||| ||||| ||||||||| |||||||| |||||||||  |||||||||  ||||| ||||    
T  25647841 aaaagctcataaccgaaagatcattcaactttcaccacctctcgacctccgatccaccaaaagaaaccataaaaagcctaaaaccaaaaacttaagccaa 25647742  T
Q  111 caaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacc 210  Q
      |||  ||||||||||||||| |||||||||||||||| ||  |||||| ||||||||||||||||||||| |||| | | ||||||||||||||||||    
T  25647741 agaaccaactcccgatctcgaatcaaaagtgataggcccgtcagactttaggaccaaatcagaagggcacccttcactcccggtacaccagagaaacacc 25647642  T
Q  211 aaa 213  Q
    |||    
T  25647641 aaa 25647639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 14879591 - 14879415
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaacc-aaacttaatccaac 111  Q
    |||||||| ||||||||||||| || | |||||||||||||| ||||| | |||||||||||||||| ||||||||  ||||||| |||||| |||||||    
T  14879591 aaaagctcctatctgaaagatcattaagcttccaccacctctcgacctcctatccaccgaaagaaaccataaaaagtccaaaaccaaaacttgatccaac 14879492  T
Q  112 aaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcacc 188  Q
     ||| |||||||||||||||| |||||||||| |||||| |  |||||| |||| |||||||||||||||| |||||    
T  14879491 gaacagactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcacccgtcacc 14879415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 37123541 - 37123337
Alignment:
Q  8 catcaaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatc 107  Q
    |||| |||||||||| ||||||||||| | || |||||||||||| | || || |||||| | ||||||||| ||||||||| |||||||||| || |||    
T  37123541 catcgaaaagctcatgtctgaaagatcatacagcttccaccacctatcgaactccgatcctc-gaaagaaaccataaaaagcccaaaaccaaatttgatc 37123443  T
Q  108 caacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaac 207  Q
    |||  ||||||||||| |||||||| |||||||||| |||||| | || |||| ||||||| || ||||||||||||| || || ||||| |||||||||    
T  37123442 caaagaactgactcccaatctcgaatcaaaagtgatcggcccaccaaaatttaggaccaaaacataagggcacccctctccttcggtacatcagagaaac 37123343  T
Q  208 accaaa 213  Q
    ||||||    
T  37123342 accaaa 37123337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 213
Target Start/End: Original strand, 14755204 - 14755389
Alignment:
Q  27 gaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaactt-aatccaacaaactgactcccga 125  Q
    |||||||| |||| ||||||||| |||| ||||| ||||||| |||||||||| ||||||||| |||| |||| ||  || ||||  |||||||||||||    
T  14755204 gaaagatcattcaacttccaccatctctcgacctccgatccatcgaaagaaacaataaaaagcccaaatccaacctcgaaaccaaagaactgactcccga 14755303  T
Q  126 tctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||| ||| |||||||||| |||||| |  ||||||  || |||  | |||||||||||||||| || |||||||||||||||||||||    
T  14755304 tcttgaatcaaaagtgatcggcccaccagactttagcacaaaa--aaaagggcacccctcaccttcggtacaccagagaaacaccaaa 14755389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 69 - 213
Target Start/End: Complemental strand, 14194041 - 14193894
Alignment:
Q  69 ccgaaagaaactataaaaagcacaaaaccaaa--cttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgacca 166  Q
    ||||||||||| ||||||||| ||||||||||  ||| | ||||  ||| ||||||| |||||||| |||||||||| || ||  |  |||||| |||||    
T  14194041 ccgaaagaaaccataaaaagcccaaaaccaaaaacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggacca 14193942  T
Q  167 aatcagaagggcacccctcaccctctgtacaccagagaa-acaccaaa 213  Q
    ||||||||||||||||||||| | | |||||||| |||| ||||||||    
T  14193941 aatcagaagggcacccctcactcccggtacaccaaagaacacaccaaa 14193894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 33143902 - 33144005
Alignment:
Q  41 cttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcac-aaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaag 139  Q
    |||||||||||||  |||||  ||||||||||||||||| ||||||||| | ||||| || ||| ||||||  |||||||||||||||||||| ||||||    
T  33143902 cttccaccacctcgcgacctctgatccaccgaaagaaaccataaaaagcccaaaaactaatcttgatccaaagaactgactcccgatctcgaatcaaaag 33144001  T
Q  140 tgat 143  Q
    ||||    
T  33144002 tgat 33144005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 205
Target Start/End: Original strand, 23328302 - 23328468
Alignment:
Q  41 cttccaccacctcttgaccttcgatccaccgaaagaa-actata-aaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaa 138  Q
    ||||||| |||||| ||||| |||||||||||||||  || | | |||||| ||||| | ||||| | |||| || || ||||||||||||||| |||||    
T  23328302 cttccacaacctctcgacctccgatccaccgaaagagcacaaaacaaaagctcaaaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaa 23328401  T
Q  139 gtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaa 205  Q
    ||||| || ||| | |||||||  |||||||||  |||||||||||| ||| | |||||||||||||    
T  23328402 gtgatcggtccaccaaactttagaaccaaatcaacagggcacccctcgcccccggtacaccagagaa 23328468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 30935386 - 30935512
Alignment:
Q  83 aaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcaccc 182  Q
    ||||||| ||||||||||||| | ||||  |||| ||||||||||| ||| |||||| |||  ||||| | ||||| |  ||||||||||||||||||||    
T  30935386 aaaaagctcaaaaccaaacttgaaccaaataactaactcccgatcttgaatcaaaagcgatcagcccaccaaacttcaaaaccaaatcagaagggcaccc 30935485  T
Q  183 ctcaccctctgtacaccagagaaacac 209  Q
    || |||| | || ||||||||||||||    
T  30935486 cttacccccggtccaccagagaaacac 30935512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 39021234 - 39021339
Alignment:
Q  44 ccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgat 143  Q
    |||||| |||| ||||| ||||||||| |||||| |||||||| || |||||||| |||| ||||||  ||||||||||||| |||||| ||||||||||    
T  39021234 ccaccatctctcgacctccgatccaccaaaagaatctataaaa-gcccaaaaccagacttgatccaaagaactgactcccgacctcgaatcaaaagtgat 39021332  T
Q  144 aggccca 150  Q
     ||||||    
T  39021333 cggccca 39021339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 84 - 205
Target Start/End: Complemental strand, 47945790 - 47945668
Alignment:
Q  84 aaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccc 183  Q
    |||||| ||||| ||||||| | ||||  |||||||||||||||||||| |||||||||| |||||| || |||||| |||| || |||| |||||||||    
T  47945790 aaaagcccaaaatcaaacttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccaccggactttaggacccaaccagacgggcacccc 47945691  T
Q  184 tcaccctct-gtacaccagagaa 205  Q
    | |||| || || ||||||||||    
T  47945690 ttaccccctggtccaccagagaa 47945668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 28937638 - 28937726
Alignment:
Q  11 caaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaa 99  Q
    |||||||||| |  |||||| ||| |||| ||||||||| |||||||||| |||||||||||||||||| ||||||||| |||| ||||    
T  28937638 caaaaagctcctccctgaaacatcattcagcttccaccatctcttgacctccgatccaccgaaagaaaccataaaaagcccaaatccaa 28937726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 20611838 - 20611738
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| ||||| |||| |||||| | |||| ||  || |||| || |||||||||||| ||| | |||||||||||||| |||||    
T  20611838 aactgactcccgatctcgaatcaaaaatgatcggcccaacaaactatagtacgaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaa 20611739  T
Q  213 a 213  Q
    |    
T  20611738 a 20611738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 1652827 - 1652949
Alignment:
Q  28 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaacaaactgactcccgat 126  Q
    ||||||| |||| ||||| ||||| ||| |||| || ||||||||||||| || | ||||||| ||||||||||||| | ||||  |||| ||||| |||    
T  1652827 aaagatcattcaacttccgccaccgcttaacctccggtccaccgaaagaacacca-aaaaagcccaaaaccaaacttgaaccaaagaactaactcctgat 1652925  T
Q  127 ctcgaaacaaaagtgataggccca 150  Q
    |||||| |||||||||| ||||||    
T  1652926 ctcgaatcaaaagtgatcggccca 1652949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 4464004 - 4464061
Alignment:
Q  155 actttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||| | |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  4464004 actttaaggccaaatcagaagggcacccctcaccctcggtaca-cagagaaacaccaaa 4464061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 19176557 - 19176458
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| |||||||||| |||||| |  ||||||  ||||||| || |||||| ||||||| | | ||||| |||||||| |||||    
T  19176557 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaattagcagggca-ccctcactcccggtacatcagagaaaaaccaa 19176459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 823461 - 823559
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacca 211  Q
    ||||||||| |||||||||| |||||||||| |||||||    ||| || |||||||  ||||||||||| | |||| | || ||||||||||||||||    
T  823461 aactgactctcgatctcgaatcaaaagtgatcggcccattagtcttcataaccaaatttgaagggcaccctttacccacggtccaccagagaaacacca 823559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 5556696 - 5556530
Alignment:
Q  43 tccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaa-cttaatccaacaaactgactcccgatctcgaaacaaaagtg 141  Q
    ||||||||||||  |||| || |||||||||||||    | |||||| |||||||||| ||| | ||||  |||||||||||||||||||| |||||| |    
T  5556696 tccaccacctctaaacctccggtccaccgaaagaacacctgaaaagcccaaaaccaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcg 5556597  T
Q  142 ataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaaca 208  Q
    || | |||| |  |||  | |||||||||| |||||||||||  || ||| || ||| |||||||||    
T  5556596 atcgccccaccagactacaagaccaaatcaaaagggcaccccaaacactcggtccacgagagaaaca 5556530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 34475783 - 34475873
Alignment:
Q  116 tgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaa 206  Q
    ||||||||||||||||| |||||||||| |||||| |  ||| ||  | ||||| || |||||||||||| ||| | ||||||||||||||    
T  34475783 tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggcacccctcgcccccggtacaccagagaaa 34475873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 150
Target Start/End: Complemental strand, 17551012 - 17550975
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggccca 150  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  17551012 aactgactcccgatctcgaatcaaaagtgatcggccca 17550975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 150
Target Start/End: Complemental strand, 45163969 - 45163873
Alignment:
Q  55 tgaccttcgatccaccgaaaga-aactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggccca 150  Q
    |||||| |||||||||||||||  || | | ||||| ||||| | |||||||  ||| ||||||||| | ||||||||| |||||||||| ||||||    
T  45163969 tgacctccgatccaccgaaagagcacaacacaaagcccaaaaaccaacttaagacaaaaaactgacttctgatctcgaatcaaaagtgatcggccca 45163873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 19515 - 19338
Alignment:
Q  36 ttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaaca 135  Q
    |||| ||||||||| |||| ||||| |||||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||| ||||||||||| ||    
T  19515 ttcagcttccaccaactctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatca 19416  T
Q  136 aaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||||| |||||| |  |||||| ||||||||||||||||||||||||||| |  ||| |||||||||||| ||||    
T  19415 aaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctcacctttggtataccagagaaacatcaaa 19338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 5e-43; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 209
Target Start/End: Original strand, 37770568 - 37770763
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    |||||||||||||||||||||| |||| |||||| ||||||| ||||| |||| ||||||||||||| |||||| || |||||||||| || ||| ||      
T  37770568 aaaagctcatatctgaaagatcattcagcttccaacacctctcgacctccgattcaccgaaagaaaccataaaa-gcccaaaaccaaaattgatctaaag 37770666  T
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacac 209  Q
    || ||||||| ||||  ||| |||||||||| |||||| | ||| ||| |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  37770667 aattgactcctgatccagaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggcacccctcaccctcggtacaccagagaaacac 37770763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 1269615 - 1269438
Alignment:
Q  36 ttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaaca 135  Q
    |||| ||||||||| |||| ||||| |||||||| ||||||||| ||||||| | ||||||||||||| | ||||  |||||||| ||||||||||| ||    
T  1269615 ttcagcttccaccaactctcgacctccgatccactgaaagaaaccataaaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatca 1269516  T
Q  136 aaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||||| |||||| |  |||||| ||| ||||||||||||||||||||||| |  ||| |||||||||||| ||||    
T  1269515 aaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcacctttggtataccagagaaacatcaaa 1269438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 213
Target Start/End: Complemental strand, 13337427 - 13337229
Alignment:
Q  15 aagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaa 114  Q
    |||||| ||||||||||||| ||||   | |||||||||| ||||| | |||||||||||||||| ||||||||  ||||||| ||||| |  |||  ||    
T  13337427 aagctcctatctgaaagatcattcagtgttcaccacctctcgacctcctatccaccgaaagaaaccataaaaagtccaaaacctaacttgagtcaaagaa 13337328  T
Q  115 ctgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggca-cccctcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||| ||||| ||||| |||||||||| ||||||||  |||||| |  ||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  13337327 ctgacttccgatttcgaatcaaaagtgatcggcccatcagactttaaggtcaaatcagaagggcaccccctcaccct-ggtacaccagagaaacaccaaa 13337229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 34230356 - 34230198
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    |||||||| ||| ||||||||| |||| ||||||||||||||  |||| |||||||||||||||||| | ||||||| ||||| ||||||| ||||||      
T  34230356 aaaagctcttatttgaaagatcattcagcttccaccacctctcaacctccgatccaccgaaagaaaccacaaaaagcccaaaatcaaacttgatccaaag 34230257  T
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatca 171  Q
    |||||||||| |||||||||  |||| |||| |||||||| ||||||| || |||||||    
T  34230256 aactgactcctgatctcgaataaaaaatgatcggcccatcaaactttacgatcaaatca 34230198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 41086721 - 41086905
Alignment:
Q  11 caaaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaa 110  Q
    |||||||||| |||| |||||||| |||| |||||||||||||| ||||| |||||||||||||| ||| ||||||||| ||||||||||||  ||||||    
T  41086721 caaaaagctcttatccgaaagatcattcagcttccaccacctctcgacctccgatccaccgaaaggaaccataaaaagcccaaaaccaaact--atccaa 41086818  T
Q  111 caaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaa 205  Q
      | ||       ||||||||| |||||||||| | |||| |  ||| ||||||||||||||||||||| |||||||||   |||||||||||||    
T  41086819 agagct-------gatctcgaatcaaaagtgattgacccaccagactatatgaccaaatcagaagggca-ccctcacccctggtacaccagagaa 41086905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 210
Target Start/End: Original strand, 10173503 - 10173701
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaac 111  Q
    ||||||||||||   ||||||| |||| |||||||||||||| ||||| |||| ||||||||||| || |  |||||| ||||||||||||| | ||||     
T  10173503 aaaagctcatattcaaaagatcattcaacttccaccacctctcgacctccgattcaccgaaagaacaccaacaaaagcccaaaaccaaacttgagccaaa 10173602  T
Q  112 aaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctct-gtacaccagagaaacacc 210  Q
     |||| ||| ||||||||||| |||||||||| ||||||    |||||| ||||||| || ||| |||||| ||| ||||| ||||||||||||||||||    
T  10173603 taacttacttccgatctcgaatcaaaagtgatcggcccactagactttaggaccaaaacaaaagagcacccttca-cctctggtacaccagagaaacacc 10173701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 7696108 - 7695988
Alignment:
Q  22 tatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactc 121  Q
    |||| |||||||| |||| |||||||||||||  ||||||||||||||||||||||||  | |||||| ||||||| ||||| | ||||  |||||||||    
T  7696108 tatccgaaagatcattcagcttccaccacctcccgaccttcgatccaccgaaagaaaccgt-aaaagcccaaaacctaacttgagccaaagaactgactc 7696010  T
Q  122 ccgatctcgaaacaaaagtgat 143  Q
    ||| | ||||| ||||||||||    
T  7696009 ccggtatcgaatcaaaagtgat 7695988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 16952308 - 16952434
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaac 111  Q
    |||||||| |||| ||||||||||| | ||||||||||||||  |||| |||||||||||||||| || | |||| |  ||||||||||||| | ||||     
T  16952308 aaaagctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaa 16952407  T
Q  112 aaactgactcccgatctcgaaacaaaa 138  Q
     ||||| |||||||||||||| |||||    
T  16952408 gaactggctcccgatctcgaatcaaaa 16952434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 17022973 - 17023099
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaac 111  Q
    |||||||| |||| ||||||||||| | ||||||||||||||  |||| |||||||||||||||| || | |||| |  ||||||||||||| | ||||     
T  17022973 aaaagctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaa 17023072  T
Q  112 aaactgactcccgatctcgaaacaaaa 138  Q
     ||||| |||||||||||||| |||||    
T  17023073 gaactggctcccgatctcgaatcaaaa 17023099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 17060279 - 17060405
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaac 111  Q
    |||||||| |||| ||||||||||| | ||||||||||||||  |||| |||||||||||||||| || | |||| |  ||||||||||||| | ||||     
T  17060279 aaaagctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaa 17060378  T
Q  112 aaactgactcccgatctcgaaacaaaa 138  Q
     ||||| |||||||||||||| |||||    
T  17060379 gaactggctcccgatctcgaatcaaaa 17060405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 14106552 - 14106650
Alignment:
Q  115 ctgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||||||||||| ||| |||||||||| |||||| |  |||||| ||||||||||| |||||||||||| ||||  |||||  |||| |||||||||    
T  14106552 ctgactcccgatcttgaatcaaaagtgatcggcccaccagactttaggaccaaatcagcagggcacccctcgccctgggtacatgagaggaacaccaaa 14106650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 7874344 - 7874254
Alignment:
Q  115 ctgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaa 205  Q
    |||||||||||||||||| |||||||||| | |||| |  ||||||  |||||||||| ||||||||| || ||||| |||||| ||||||    
T  7874344 ctgactcccgatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatcagcagggcacccatcgccctcggtacactagagaa 7874254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 39338891 - 39338991
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| |||||| ||| |||||| |  ||| ||  ||||||| || |||||||||||| ||| | |||||||| ||||| |||||    
T  39338891 aactgactcccgatctcgaatcaaaagcgatcggcccaccagactatagtaccaaattagcagggcacccctcgcccccggtacaccaaagaaaaaccaa 39338990  T
Q  213 a 213  Q
    |    
T  39338991 a 39338991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 22885137 - 22885196
Alignment:
Q  91 caaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggccca 150  Q
    ||||||||||||| | ||||  |||||||||||||||||||| |||||||||| ||||||    
T  22885137 caaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggccca 22885196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 210
Target Start/End: Original strand, 25504862 - 25505032
Alignment:
Q  41 cttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaa-cttaatccaacaaactgactcccgatctcgaaacaaaa 138  Q
    ||||||||||||||  ||||||| |||| |||||||| || | ||||||| |||||||||| | | | ||||  ||||||||||||||||||||  ||||    
T  25504862 cttccaccacctctgaaccttcggtccatcgaaagaacacca-aaaaagcccaaaaccaaaacctgaaccaaagaactgactcccgatctcgaattaaaa 25504960  T
Q  139 gtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacc 210  Q
    | |||||| ||| |  |||  | |||||||||| |||||||||||| | |||| || ||||| || ||||||    
T  25504961 gcgataggtccaccagactgcaagaccaaatcataagggcaccccttatcctcagtccaccataggaacacc 25505032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 210
Target Start/End: Complemental strand, 18681149 - 18681023
Alignment:
Q  84 aaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccc 183  Q
    |||||| ||||||||||||| | |||   |||||||||||||||||||| |||| |  || |||||| |  |||| || |||||||||||||||||  ||    
T  18681149 aaaagcccaaaaccaaacttgaaccagagaactgactcccgatctcgaatcaaatgcaatcggcccaccatacttcataaccaaatcagaagggcagtcc 18681050  T
Q  184 tcaccctctgtacaccagagaaacacc 210  Q
    | |||| | || ||| |||||||||||    
T  18681049 ttacccccggtccactagagaaacacc 18681023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 17105457 - 17105369
Alignment:
Q  123 cgatctcgaaacaaaa-gtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacc 210  Q
    |||||||||| ||||| ||||| ||||||||  |||| |  |||||||||| ||||||||||||||||   |||||||| |||||||||    
T  17105457 cgatctcgaatcaaaaagtgatcggcccatcagacttcagtaccaaatcagtagggcacccctcacccctggtacaccaaagaaacacc 17105369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 14405251 - 14405162
Alignment:
Q  115 ctgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaa 205  Q
    |||||||||||||||||| |||||||||| |||||| |  ||||||  |||||||||  |  ||||||||| ||| | |||||||||||||    
T  14405251 ctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcatca-agcacccctcgcccccggtacaccagagaa 14405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 10524149 - 10524052
Alignment:
Q  116 tgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||||||||||||||||| |||||||||| |||||| |  ||| ||  |||||||  | |||||||| ||| ||| | ||| |||||||||| ||||||    
T  10524149 tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggcagggcacctctcgcccccagtagaccagagaaaaaccaaa 10524052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 2062974 - 2062918
Alignment:
Q  83 aaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaag 139  Q
    ||||||| ||||||||||||| | ||||  | |||||||||||||||||| ||||||    
T  2062974 aaaaagcccaaaaccaaacttgagccaaagagctgactcccgatctcgaatcaaaag 2062918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 16960064 - 16960000
Alignment:
Q  86 aagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggccca 150  Q
    |||| ||||||||||||| | ||||  ||||||||| |||||||||| |||||| ||| ||||||    
T  16960064 aagcccaaaaccaaacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggccca 16960000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 31902413 - 31902533
Alignment:
Q  86 aagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctc 185  Q
    |||| ||||||||||||| | |||   ||||||||||||||||||||  ||||| ||| |||||| |  |||| |  | ||||| |||||| |||||||     
T  31902413 aagctcaaaaccaaacttgaaccagagaactgactcccgatctcgaattaaaagcgattggcccaccagacttcagcatcaaataagaaggacaccccta 31902512  T
Q  186 accctctgtacaccagagaaa 206  Q
    |||| | || |||||||||||    
T  31902513 acccccggtccaccagagaaa 31902533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 58282 - 58082
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    |||||||| |||| |||||||  |||| |||||| || |||| ||||| |||||||||||||||||| |||||||||  |||||||||||| ||||||      
T  58282 aaaagctcttatccgaaagataattcagcttccatcatctctcgacctccgatccaccgaaagaaaccataaaaagcctaaaaccaaacttgatccaaac 58183  T
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    || ||||| ||||||| ||| |||||||||| |||||| | ||||||| ||||||||| ||||||||||   ||||||  ||||||||||||||||||||    
T  58182 aattgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaatctgaagggcaccatacaccctaggtacaccagagaaacaccaa 58083  T
Q  213 a 213  Q
    |    
T  58082 a 58082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 17656928 - 17657127
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaaca 112  Q
    |||||||| ||| ||||||||| |||| |||||||||||| | ||||| |||||||||||||||||| ||||||||  ||||||||||||| | ||||      
T  17656928 aaaagctcctatatgaaagatcattcagcttccaccacctatcgacctccgatccaccgaaagaaaccataaaaagtccaaaaccaaacttgagccaaag 17657027  T
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| |||||||||| | |||| |  |||||| | |||| | |||||||||||||||| || | ||||| ||||||||||||||    
T  17657028 aactgactcccgatctcgaatcaaaagtgatcgacccaccatactttaggtccaacttagaagggcacccctcatcc-cggtacatcagagaaacaccaa 17657126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 28 - 213
Target Start/End: Original strand, 10248494 - 10248679
Alignment:
Q  28 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatc 127  Q
    |||||||  ||| |||||||||||||  | ||| ||||||||| |||||||| ||| |||||| |||||||||||| | ||||  |||||||||||||||    
T  10248494 aaagatcaatcagcttccaccacctcgcggcctccgatccaccaaaagaaaccatataaagcaaaaaaccaaacttgagccaaagaactgactcccgatc 10248593  T
Q  128 tcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    | ||| |||||||||| || ||| | || |||| ||| |||| |||||| |||||||||||| | |||||||||||||||||||||    
T  10248594 ttgaatcaaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccctcacccccggtacaccagagaaacaccaaa 10248679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 210
Target Start/End: Original strand, 30236124 - 30236251
Alignment:
Q  83 aaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcaccc 182  Q
    ||||||| ||||||||||||| | ||||  |||||||||||||||||||| |||||| ||| | |||| |  |||| |  ||||||||||||||||||||    
T  30236124 aaaaagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaagggcaccc 30236223  T
Q  183 ctcaccctctgtacaccagagaaacacc 210  Q
    || |||| | || |||||||||||||||    
T  30236224 cttacccccggtccaccagagaaacacc 30236251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 211
Target Start/End: Complemental strand, 15906818 - 15906643
Alignment:
Q  37 tcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaa-agcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaaca 135  Q
    ||||||||||||||||||| ||||  | ||||| |||||||||  ||||  ||| ||||||||||||| | ||||  |||||||||||||||||||| ||    
T  15906818 tcatcttccaccacctcttaacctctggtccactgaaagaaacactaaatcagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatca 15906719  T
Q  136 aaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacca 211  Q
    || ||||| |||||| |  |||| | ||||||| || | |||||||| | |||| | || |||| |||||||||||    
T  15906718 aatgtgatcggcccaccagacttcaggaccaaaccaaacgggcacccttaacccccagtccacccgagaaacacca 15906643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 15821407 - 15821497
Alignment:
Q  115 ctgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaa 205  Q
    |||||||||||||||||| ||||||||||  ||||| |  ||||||  |||||||||| |||||||||||| ||||| |||||||||||||    
T  15821407 ctgactcccgatctcgaatcaaaagtgatcagcccaccagactttagaaccaaatcagcagggcacccctcgccctcggtacaccagagaa 15821497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 9519554 - 9519454
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| ||||| |||| ||||||    ||| ||  ||||||| || |||||||||||||||| | |||||||||||||| |||||    
T  9519554 aactgactcccgatctcgaatcaaaactgatcggcccactagactatagtaccaaattagcagggcacccctcacccccggtacaccagagaaaaaccaa 9519455  T
Q  213 a 213  Q
    |    
T  9519454 a 9519454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 37986884 - 37986984
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| ||||| |||| |||||| |  ||| ||  ||||||| || |||||||||||| ||| | |||||||||||||| |||||    
T  37986884 aactgactcccgatctcgaatcaaaaatgattggcccaccagactataacaccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaa 37986983  T
Q  213 a 213  Q
    |    
T  37986984 a 37986984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 12197994 - 12198171
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaac 111  Q
    ||||||||||||| |||||||| || | |||||| ||||||| ||||| |||||||  ||||||| |  | ||||||| ||||||||||||| | ||||     
T  12197994 aaaagctcatatccgaaagatcattgaacttccatcacctctcgacctccgatccattgaaagaacatcaaaaaaagctcaaaaccaaacttgagccaaa 12198093  T
Q  112 aaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccc 189  Q
     ||||||||||| || |  ||  ||||||||| || ||| |  |||| |||||||||| ||||| |||| ||| ||||    
T  12198094 gaactgactcccaattttcaattaaaagtgatcggtccaccagacttcatgaccaaattagaagagcacaccttaccc 12198171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 12442422 - 12442599
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaacttaatccaac 111  Q
    ||||||||||||| |||||||| || | |||||| ||||||| ||||| |||||||  ||||||| |  | ||||||| ||||||||||||| | ||||     
T  12442422 aaaagctcatatccgaaagatcattgaacttccatcacctctcgacctccgatccattgaaagaacatcaaaaaaagctcaaaaccaaacttgagccaaa 12442521  T
Q  112 aaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccc 189  Q
     ||||||||||| || |  ||  ||||||||| || ||| |  |||| |||||||||| ||||| |||| ||| ||||    
T  12442522 gaactgactcccaattttcaattaaaagtgatcggtccaccagacttcatgaccaaattagaagagcacaccttaccc 12442599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 24995421 - 24995521
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| |||||||||| |||||| |  ||| ||  ||||||| || | | |||||||| ||| | |||||||||||||| |||||    
T  24995421 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcaagacacccctcgcccccagtacaccagagaaaaaccaa 24995520  T
Q  213 a 213  Q
    |    
T  24995521 a 24995521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 36630892 - 36630792
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    ||||||| ||||||||||||  ||||||||| |||||| |  ||||||  ||||||| || |||||||||||| ||| | |||||||| ||||| |||||    
T  36630892 aactgacacccgatctcgaattaaaagtgatcggcccaccagactttagaaccaaattagcagggcacccctcgcccccggtacaccaaagaaaaaccaa 36630793  T
Q  213 a 213  Q
    |    
T  36630792 a 36630792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 32066323 - 32066421
Alignment:
Q  115 ctgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||||||||| ||||| |||||||||| |||||| |  ||| ||  ||||||| || |||||||||||| ||| | |||||| ||||||| ||||||    
T  32066323 ctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcgcccccggtacactagagaaaaaccaaa 32066421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 23264770 - 23264722
Alignment:
Q  104 aatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatc 152  Q
    |||| |||||||||||||||||||||||| ||||| ||||||| |||||    
T  23264770 aatcaaacaaactgactcccgatctcgaatcaaaattgataggtccatc 23264722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 31207388 - 31207487
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||||||||||||| |||||||||| |||||| |  ||| ||  ||||||| || |||||| ||||| |||   |||||||||||||| |||||    
T  31207388 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggca-ccctcgcccctggtacaccagagaaaaaccaa 31207486  T

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Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 34389031 - 34389131
Alignment:
Q  113 aactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaa 212  Q
    |||||||||  ||||||||| |||||||||| |||||| |  ||| ||  ||||||| || |||||||||||| |||   |||||||||||||| |||||    
T  34389031 aactgactcttgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcgcccctggtacaccagagaaaaaccaa 34389130  T
Q  213 a 213  Q
    |    
T  34389131 a 34389131  T

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Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 10552354 - 10552253
Alignment:
Q  82 taaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacc 181  Q
    |||||||||||||||||||||  | |||   |||||||||||||||| ||| |||||| ||| |||||| |  |||| |  |||||||||| ||||||||    
T  10552354 taaaaagcacaaaaccaaactagaaccagagaactgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaatcag-agggcacc 10552256  T
Q  182 cct 184  Q
    |||    
T  10552255 cct 10552253  T

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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 32945681 - 32945759
Alignment:
Q  65 tccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgat 143  Q
    |||||||||||||  |  ||||||| ||||||||||||| |  |||  || ||||||||||||||||| ||||||||||    
T  32945681 tccaccgaaagaacatcaaaaaagcccaaaaccaaacttgaatcaaagaattgactcccgatctcgaatcaaaagtgat 32945759  T

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Target: scaffold0119 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 42087 - 42264
Alignment:
Q  36 ttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaacttaatccaacaaactgactcccgatctcgaaaca 135  Q
    |||| ||||||||| |||| ||||| |||||||| ||||||||| ||||||| | ||||||||||||| | ||||  |||||||| ||||||||||| ||    
T  42087 ttcagcttccaccaactctcgacctccgatccactgaaagaaaccataaaaatcccaaaaccaaacttgagccaaagaactgacttccgatctcgaatca 42186  T
Q  136 aaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    |||||||| |||||| |  |||||| ||| ||||||||||||||||||||||| |  ||| |||||||||||| ||||    
T  42187 aaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcacctttggtataccagagaaacatcaaa 42264  T

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Target: scaffold0050 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 36864 - 36662
Alignment:
Q  13 aaaagctcatatctgaaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaaactataaaaagcacaaaaccaaac--ttaatccaa 110  Q
    |||||||| || | |||||| | |||| |||||||||| ||| ||||| |||||||||||||||||  ||||||||  ||||||||||   || |  |||    
T  36864 aaaagctcctaaccgaaagaccattcaacttccaccacatctcgacctccgatccaccgaaagaaatcataaaaagaccaaaaccaaaaagttgagacaa 36765  T
Q  111 caaactgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacacc 210  Q
      |||||||||||||||||||| ||||||||||  ||||  |  |||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  36764 agaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacccctcactctcggtacaccagagaaacacc 36665  T
Q  211 aaa 213  Q
    |||    
T  36664 aaa 36662  T

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Target: scaffold1613 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 213
Target Start/End: Original strand, 957 - 1142
Alignment:
Q  28 aaagatcgttcatcttccaccacctcttgaccttcgatccaccgaaagaa-actataaaaagcacaaaaccaaa-cttaatccaacaaactgactcccga 125  Q
    |||||||  |||||||||||||| |||| | || |||| || ||| |||| |||| ||||| | |||||||||| ||||| ||||  |||||||||||||    
T  957 aaagatcaatcatcttccaccacttcttaatctccgattcatcgagagaacacta-aaaaacctcaaaaccaaaacttaaaccaaagaactgactcccga 1055  T
Q  126 tctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||||||| |||||| ||| |||||| |  |||| |||||||||||||||||| ||||||||  | | || ||||||||||||||||||    
T  1056 tctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtccaccagagaaacaccaaa 1142  T

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Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 35800 - 35897
Alignment:
Q  116 tgactcccgatctcgaaacaaaagtgataggcccatcgaactttatgaccaaatcagaagggcacccctcaccctctgtacaccagagaaacaccaaa 213  Q
    ||||||||||||||||| |||||||||| ||||||    ||| ||| ||||||| ||   |||||||||| ||| | |||||||||||||| ||||||    
T  35800 tgactcccgatctcgaatcaaaagtgatcggcccactagactatataaccaaattagctaggcacccctcgcccccggtacaccagagaaaaaccaaa 35897  T

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Target: scaffold0062 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 47094 - 47052
Alignment:
Q  167 aatcagaagggcacccctcaccctctgtacaccagagaaacac 209  Q
    ||||||||||||||||||||||| | || ||||||||||||||    
T  47094 aatcagaagggcacccctcacccccggttcaccagagaaacac 47052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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