View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8723_low_2 (Length: 458)

Name: NF8723_low_2
Description: NF8723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8723_low_2
NF8723_low_2
[»] chr6 (22 HSPs)
chr6 (206-439)||(21599971-21600204)
chr6 (7-206)||(13727316-13727517)
chr6 (7-205)||(21479482-21479683)
chr6 (7-205)||(21280533-21280733)
chr6 (7-205)||(27788608-27788806)
chr6 (7-191)||(33774105-33774292)
chr6 (7-166)||(19737650-19737810)
chr6 (7-205)||(30832443-30832642)
chr6 (7-205)||(17353942-17354142)
chr6 (12-205)||(20711638-20711833)
chr6 (27-203)||(1155767-1155947)
chr6 (7-191)||(28075771-28075960)
chr6 (7-205)||(24710914-24711117)
chr6 (60-205)||(27314097-27314243)
chr6 (7-124)||(34397845-34397963)
chr6 (25-92)||(20611796-20611864)
chr6 (7-191)||(235157-235343)
chr6 (25-118)||(6159444-6159538)
chr6 (25-95)||(21183704-21183775)
chr6 (7-53)||(19987149-19987195)
chr6 (154-190)||(20611924-20611960)
chr6 (40-91)||(30121783-30121835)
[»] chr1 (40 HSPs)
chr1 (7-205)||(44655737-44655936)
chr1 (7-202)||(50881426-50881621)
chr1 (7-205)||(14146296-14146495)
chr1 (7-205)||(17168952-17169151)
chr1 (7-205)||(23185423-23185622)
chr1 (11-191)||(16140055-16140236)
chr1 (7-205)||(5316676-5316875)
chr1 (7-205)||(5027545-5027746)
chr1 (7-206)||(9172939-9173140)
chr1 (7-206)||(9180921-9181122)
chr1 (7-205)||(6771787-6771989)
chr1 (7-205)||(4971536-4971735)
chr1 (7-188)||(41697072-41697254)
chr1 (7-206)||(1366796-1366995)
chr1 (7-205)||(19955713-19955912)
chr1 (9-120)||(27559635-27559747)
chr1 (7-205)||(40501707-40501907)
chr1 (32-205)||(21740852-21741029)
chr1 (7-205)||(27906646-27906834)
chr1 (7-124)||(3406414-3406532)
chr1 (7-124)||(3440288-3440406)
chr1 (7-202)||(13913401-13913599)
chr1 (34-207)||(6889634-6889807)
chr1 (34-207)||(6891480-6891653)
chr1 (7-189)||(51607374-51607557)
chr1 (138-191)||(34247155-34247208)
chr1 (138-205)||(22865378-22865445)
chr1 (28-95)||(26803965-26804030)
chr1 (7-54)||(44895648-44895695)
chr1 (28-92)||(38853539-38853604)
chr1 (25-95)||(5533326-5533397)
chr1 (25-95)||(43235798-43235869)
chr1 (25-95)||(45758508-45758579)
chr1 (36-92)||(35392295-35392352)
chr1 (138-205)||(3406547-3406614)
chr1 (138-205)||(3440206-3440273)
chr1 (28-90)||(33170776-33170839)
chr1 (25-95)||(38547064-38547135)
chr1 (138-198)||(44895776-44895836)
chr1 (138-190)||(50146424-50146476)
[»] chr3 (30 HSPs)
chr3 (7-205)||(38681011-38681211)
chr3 (7-205)||(54619121-54619321)
chr3 (7-205)||(43207157-43207355)
chr3 (7-207)||(21582759-21582962)
chr3 (7-205)||(8073257-8073455)
chr3 (7-204)||(3953816-3954014)
chr3 (7-205)||(36715942-36716143)
chr3 (7-207)||(47467672-47467874)
chr3 (7-205)||(27078486-27078687)
chr3 (7-205)||(27084283-27084484)
chr3 (7-205)||(18372467-18372670)
chr3 (7-201)||(44708465-44708660)
chr3 (7-205)||(42098789-42098989)
chr3 (18-212)||(50258535-50258731)
chr3 (7-205)||(34290554-34290754)
chr3 (7-205)||(50939152-50939351)
chr3 (7-206)||(53506801-53507002)
chr3 (7-205)||(54407073-54407275)
chr3 (7-202)||(53149235-53149432)
chr3 (11-201)||(37168359-37168551)
chr3 (9-89)||(29620423-29620504)
chr3 (27-202)||(36605973-36606149)
chr3 (143-206)||(29620363-29620426)
chr3 (7-124)||(9878687-9878805)
chr3 (138-205)||(48720429-48720496)
chr3 (23-95)||(28689390-28689463)
chr3 (138-191)||(48157249-48157302)
chr3 (60-95)||(23641347-23641382)
chr3 (7-54)||(48157127-48157174)
chr3 (28-95)||(49393099-49393166)
[»] chr2 (29 HSPs)
chr2 (7-205)||(4505878-4506078)
chr2 (7-205)||(12337365-12337566)
chr2 (7-202)||(6964991-6965186)
chr2 (7-205)||(3155201-3155401)
chr2 (7-206)||(8906995-8907197)
chr2 (7-205)||(29939781-29939980)
chr2 (7-205)||(3952990-3953188)
chr2 (7-205)||(27506659-27506858)
chr2 (55-201)||(40636171-40636317)
chr2 (7-202)||(10762488-10762683)
chr2 (7-205)||(7162768-7162967)
chr2 (11-206)||(9046017-9046214)
chr2 (7-205)||(24410420-24410623)
chr2 (11-205)||(26716116-26716313)
chr2 (39-202)||(34693991-34694155)
chr2 (39-202)||(34716403-34716567)
chr2 (133-191)||(1396631-1396689)
chr2 (55-191)||(5952650-5952784)
chr2 (25-95)||(38400800-38400871)
chr2 (25-190)||(16097010-16097176)
chr2 (138-189)||(8327734-8327785)
chr2 (25-95)||(21665729-21665800)
chr2 (25-95)||(28425739-28425810)
chr2 (25-91)||(37182672-37182739)
chr2 (23-95)||(24035574-24035647)
chr2 (25-95)||(7742163-7742234)
chr2 (25-95)||(12134069-12134140)
chr2 (134-190)||(12694791-12694847)
chr2 (67-95)||(16227397-16227425)
[»] chr7 (27 HSPs)
chr7 (7-207)||(18776681-18776883)
chr7 (7-206)||(29077205-29077405)
chr7 (7-202)||(8171460-8171656)
chr7 (7-206)||(12596206-12596404)
chr7 (7-205)||(23550988-23551188)
chr7 (7-205)||(20091197-20091398)
chr7 (7-205)||(10329327-10329527)
chr7 (7-124)||(10955469-10955587)
chr7 (7-205)||(48983756-48983961)
chr7 (7-205)||(38414793-38414993)
chr7 (7-207)||(19692079-19692281)
chr7 (7-205)||(24525599-24525802)
chr7 (138-205)||(25010544-25010611)
chr7 (11-205)||(47984885-47985083)
chr7 (60-205)||(26254032-26254178)
chr7 (27-205)||(28749715-28749895)
chr7 (7-203)||(8239670-8239869)
chr7 (138-191)||(40357311-40357364)
chr7 (7-54)||(25010418-25010465)
chr7 (26-95)||(9021828-9021898)
chr7 (25-95)||(2611290-2611361)
chr7 (34-95)||(6765709-6765771)
chr7 (25-88)||(36891581-36891645)
chr7 (60-124)||(33162338-33162402)
chr7 (26-95)||(23859077-23859147)
chr7 (139-191)||(10955605-10955657)
chr7 (67-95)||(38971299-38971327)
[»] chr4 (46 HSPs)
chr4 (7-191)||(38209522-38209708)
chr4 (7-201)||(47128977-47129172)
chr4 (7-206)||(34027569-34027769)
chr4 (7-213)||(34768484-34768691)
chr4 (11-205)||(54780771-54780968)
chr4 (14-208)||(2790656-2790851)
chr4 (10-202)||(43455452-43455645)
chr4 (7-205)||(10978890-10979092)
chr4 (7-205)||(16845011-16845210)
chr4 (7-205)||(32915375-32915575)
chr4 (7-205)||(32128574-32128774)
chr4 (7-191)||(1105522-1105707)
chr4 (7-205)||(19498494-19498691)
chr4 (7-205)||(37514649-37514848)
chr4 (7-205)||(48209230-48209436)
chr4 (7-191)||(10428130-10428322)
chr4 (7-189)||(37777156-37777340)
chr4 (7-205)||(54083160-54083359)
chr4 (55-205)||(17679439-17679589)
chr4 (7-95)||(40089506-40089595)
chr4 (7-205)||(5128758-5128959)
chr4 (7-191)||(35465097-35465281)
chr4 (7-205)||(55255259-55255447)
chr4 (7-95)||(13460197-13460286)
chr4 (7-191)||(35779259-35779442)
chr4 (7-205)||(16882313-16882512)
chr4 (7-75)||(23509846-23509915)
chr4 (137-189)||(23508443-23508495)
chr4 (7-54)||(24969427-24969474)
chr4 (138-205)||(24969719-24969786)
chr4 (7-191)||(38352197-38352372)
chr4 (45-189)||(51964736-51964884)
chr4 (138-206)||(16922244-16922312)
chr4 (25-95)||(4167919-4167990)
chr4 (25-95)||(37744938-37745009)
chr4 (138-205)||(40089647-40089714)
chr4 (22-95)||(36178677-36178751)
chr4 (56-95)||(2135349-2135388)
chr4 (60-124)||(51691914-51691978)
chr4 (25-95)||(52468294-52468365)
chr4 (55-124)||(9578663-9578733)
chr4 (145-205)||(9578575-9578635)
chr4 (28-95)||(36118486-36118554)
chr4 (138-189)||(2975358-2975409)
chr4 (56-95)||(40217272-40217311)
chr4 (66-124)||(16922328-16922386)
[»] chr5 (38 HSPs)
chr5 (7-191)||(34756295-34756481)
chr5 (7-208)||(15480003-15480204)
chr5 (7-205)||(16591990-16592189)
chr5 (7-205)||(38869279-38869478)
chr5 (7-207)||(16198707-16198909)
chr5 (7-205)||(27078996-27079197)
chr5 (7-205)||(36187795-36187994)
chr5 (7-200)||(2274875-2275070)
chr5 (7-206)||(19523184-19523385)
chr5 (7-191)||(9364276-9364462)
chr5 (27-206)||(31194527-31194706)
chr5 (7-124)||(30854314-30854432)
chr5 (7-205)||(16799240-16799442)
chr5 (28-205)||(22986473-22986652)
chr5 (7-124)||(28822339-28822457)
chr5 (11-191)||(40389467-40389647)
chr5 (7-205)||(27924067-27924267)
chr5 (7-205)||(7670909-7671118)
chr5 (20-161)||(23284022-23284164)
chr5 (27-124)||(31881431-31881528)
chr5 (23-95)||(36868902-36868975)
chr5 (25-95)||(2530923-2530994)
chr5 (60-124)||(7338038-7338102)
chr5 (25-95)||(14318411-14318482)
chr5 (26-95)||(26718975-26719045)
chr5 (26-95)||(26988719-26988789)
chr5 (138-204)||(28822253-28822319)
chr5 (138-207)||(23283941-23284010)
chr5 (31-95)||(10543682-10543747)
chr5 (25-91)||(2412091-2412158)
chr5 (138-193)||(7338117-7338172)
chr5 (56-95)||(15639678-15639717)
chr5 (25-95)||(24395742-24395813)
chr5 (138-205)||(31881348-31881415)
chr5 (23-95)||(10407462-10407535)
chr5 (163-191)||(29143434-29143462)
chr5 (138-202)||(30854447-30854511)
chr5 (138-190)||(40794257-40794309)
[»] chr8 (22 HSPs)
chr8 (7-205)||(2952137-2952339)
chr8 (7-202)||(30883314-30883512)
chr8 (7-205)||(45475802-45476001)
chr8 (7-207)||(13534604-13534804)
chr8 (7-207)||(13624144-13624344)
chr8 (7-205)||(3048435-3048635)
chr8 (7-205)||(23606548-23606747)
chr8 (7-202)||(5860663-5860862)
chr8 (7-205)||(23798179-23798379)
chr8 (7-191)||(10917376-10917561)
chr8 (7-205)||(37430076-37430276)
chr8 (7-205)||(42600767-42600967)
chr8 (7-205)||(41879166-41879364)
chr8 (138-206)||(20003727-20003795)
chr8 (25-95)||(39332434-39332505)
chr8 (25-95)||(5942699-5942770)
chr8 (28-95)||(11290190-11290258)
chr8 (25-95)||(41677203-41677274)
chr8 (25-185)||(5973046-5973207)
chr8 (28-95)||(34789891-34789959)
chr8 (25-91)||(7944555-7944622)
chr8 (25-95)||(8102915-8102986)
[»] scaffold0070 (1 HSPs)
scaffold0070 (7-205)||(1328-1527)
[»] scaffold0039 (1 HSPs)
scaffold0039 (7-205)||(106523-106723)
[»] scaffold0012 (1 HSPs)
scaffold0012 (25-95)||(206518-206589)
[»] scaffold0001 (2 HSPs)
scaffold0001 (7-71)||(181904-181969)
scaffold0001 (138-207)||(183177-183246)
[»] scaffold1590 (1 HSPs)
scaffold1590 (29-95)||(287-354)
[»] scaffold0182 (1 HSPs)
scaffold0182 (23-95)||(24022-24095)
[»] scaffold0097 (1 HSPs)
scaffold0097 (25-95)||(38928-38999)
[»] scaffold0227 (1 HSPs)
scaffold0227 (28-89)||(16033-16095)
[»] scaffold0018 (1 HSPs)
scaffold0018 (25-95)||(173539-173610)
[»] scaffold0003 (1 HSPs)
scaffold0003 (67-95)||(351363-351391)


Alignment Details
Target: chr6 (Bit Score: 181; Significance: 1e-97; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 206 - 439
Target Start/End: Complemental strand, 21600204 - 21599971
Alignment:
Q  206 gtgcttacaaagcatataattccctgtgattgtatatttccaatgagtgggggtagtcatggcactccctattaatatcatttgcttaaagaaaatgtgc 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21600204 gtgcttacaaagcatataattccctgtgattgtatatttccaatgagtgggggtagtcatggcactccctattaatatcatttgcttaaagaaaatgtgc 21600105  T
Q  306 ttgtnnnnnnntgttcttctataaaataaattaagaaaaggacagtgcatgttcaccttgatttatgggttaaattgaaatttgaaacctcgctgatgaa 405  Q
    ||||       |||| ||||||||||||||||||||||| ||  |||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  21600104 ttgtaaaaaaatgtttttctataaaataaattaagaaaacgattgtgcatgttcactttgatttatgggtcaaattaaaatttgaaacctcgctgatgaa 21600005  T
Q  406 attggtccactggttgcaatatggttttggaata 439  Q
    |||||||||||||||||||||||||||| |||||    
T  21600004 attggtccactggttgcaatatggttttagaata 21599971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 13727517 - 13727316
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  13727517 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 13727418  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||||||||||| |||        |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  13727417 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 13727318  T
Q  205 gg 206  Q
    ||    
T  13727317 gg 13727316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 21479482 - 21479683
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  21479482 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21479581  T
Q  106 aaatagaacattgctcttt--nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    |||||||||||||||||||          |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  21479582 aaatagaacattgctcttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccaaattctcagagacggccc 21479681  T
Q  204 tg 205  Q
    ||    
T  21479682 tg 21479683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 21280533 - 21280733
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||  |||||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  21280533 tttggtgttaggtgggagttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21280632  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||||||||||| |||        |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  21280633 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 21280732  T
Q  205 g 205  Q
    |    
T  21280733 g 21280733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 27788806 - 27788608
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||| |||||||||||       |||    
T  27788806 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 27788707  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||| ||||||||||         ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  27788706 aaatagaaaattgctcttttaaaaaaa-tacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 27788608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 33774105 - 33774292
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcac-cctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||   ||| ||||||||||||||||| ||||||||||||||||||       |||    
T  33774105 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 33774204  T
Q  106 aaatagaacattgctcttt--nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    |||||||||||| ||||||          |||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  33774205 aaatagaacattactcttttaaaaaaaaattatgttttgattttattactggcctcttttcattttcagagccgagcctccgaattct 33774292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 166
Target Start/End: Complemental strand, 19737810 - 19737650
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||||||||       |||    
T  19737810 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaatat 19737711  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcat 166  Q
    |||||||||||||||||||          | ||||||||||||||||||||||||||||||    
T  19737710 aaatagaacattgctcttttaaaaaaaaaacattttgattttatcactggcctcttttcat 19737650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 30832642 - 30832443
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| | |||| |||||| |||||||||| || ||||||||||| |||       | |    
T  30832642 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgt 30832543  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||| || ||||         ||  |||||||||||||||||||||||||||||| |||||||||||||| |||||||| || ||||||||||    
T  30832542 aaatagaacatcgcgctttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagccttcgaattctcagggacggccctg 30832443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 17353942 - 17354142
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcac-cctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||   ||| |||||||||||||||||||||||| |||||||||||       |||    
T  17353942 tttggtgttaggtgggggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 17354041  T
Q  106 aaatagaacattgc-tctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||||||||| | |||         ||  ||||||||||||||||| |||||||||||| | |||| |||||||||||||||| || |||||||||    
T  17354042 aaatagaacattgctttttttaaaaaaaatacgttttgattttatcactgacctcttttcattccaagagtcgagcctccgaattcttagggacggccct 17354141  T
Q  205 g 205  Q
    |    
T  17354142 g 17354142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 12 - 205
Target Start/End: Complemental strand, 20711833 - 20711638
Alignment:
Q  12 tgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaata 110  Q
    |||||| ||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||| |||||||||||       ||||||||    
T  20711833 tgttagatgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaata 20711734  T
Q  111 gaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||| |||         ||  |||||||||||| |||| |||||||||||| ||||| ||||||||||||||||| || |||| |||||    
T  20711733 gaacattgctcttttaaaaaaaaatacgttttgattttatgactgacctcttttcattcccagaaccgagcctccgaattctcagggacgtccctg 20711638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 1155947 - 1155767
Alignment:
Q  27 cctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctcttt- 124  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||       ||||||||||||||||||||||     
T  1155947 cctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttta 1155848  T
Q  125 --nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
              |||  ||||||||||||||||| |||||||||||| | ||| |||||||||| |||| | || ||||||||    
T  1155847 aaaaaaaaaattactttttgattttatcactgacctcttttcattcctagaaccgagcctccaaatttttagggacggccc 1155767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 28075771 - 28075960
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||| |||||||||||| |||||| |||||||||||       |||    
T  28075771 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatat 28075870  T
Q  106 aaatagaacattgctcttt----nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    ||||||||||||||| |||             ||  |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  28075871 aaatagaacattgctttttaaaataaaaaaaatacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 28075960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 24711117 - 24710914
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||  |||||| |||||||||| ||||||||||||||||||       |||    
T  24711117 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaatat 24711018  T
Q  106 aaatagaacattgctctttnnnnnnnnttata----ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggc 201  Q
    |||||||||||  ||||||          | |    ||||||||||||||||  |||||||||||| || |||| ||||||||||||||| || ||||||    
T  24711017 aaatagaacatcactctttaaaaaaaaaaaaaaacgttttgattttatcactaacctcttttcattccctgagctgagcctccgaattctcagggacggc 24710918  T
Q  202 cctg 205  Q
    ||||    
T  24710917 cctg 24710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 60 - 205
Target Start/End: Complemental strand, 27314243 - 27314097
Alignment:
Q  60 tgtaccgcatatatacgacaccttgtatttatctttnnnnnnn-tataaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcct 158  Q
    ||||||||||||||||| ||||||||||||||||||        ||||||||||||||||||||||         ||  |||||||||||||||||||||    
T  27314243 tgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctcttttaaaaaaaatacgttttgattttatcactggcct 27314144  T
Q  159 cttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||| |||||| |||||||||||||| | || ||||||||||    
T  27314143 cttttcattcccagagtcgagcctccgaattttcagggacggccctg 27314097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 34397845 - 34397963
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccctg-gatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||||||||| |||| | |||||||||| |||| |||||||||| ||| |  | ||||||||||||||||| ||||||||||||||||||       |||    
T  34397845 tttggtgttaagtggaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaatat 34397944  T
Q  106 aaatagaacattgctcttt 124  Q
    |||||||||||||||||||    
T  34397945 aaatagaacattgctcttt 34397963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 20611796 - 20611864
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatc 92  Q
    |||||||||||||||||||| |||||||||  |||||||  || |||||||||||||||||||||||||    
T  20611796 ttcctcatgtatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatc 20611864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 235343 - 235157
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatac--gacaccttgtatttatctttnnnnnnnt 103  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||| | | || ||||| | ||||||||  | |||||| |||||||||||       |    
T  235343 tttggtgtt-ggtgggggtttctcatgtatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatcttttaaaaaat 235245  T
Q  104 ataaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    ||||||||| ||||||| |||         ||  |||||||||||||||||| |||||||||||  || |||||| ||||||||||||    
T  235244 ataaatagatcattgctttttaaaaaaaaatacgttttgattttatcactggtctcttttcattctcatagccgaacctccgaattct 235157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 6159444 - 6159538
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccctgga-tgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattg 118  Q
    ||||| || ||||||||||| |||| |||| | || ||||||||||||||||||||| ||||||||||||||       ||||||||||||||||    
T  6159444 ttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaacattg 6159538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 21183775 - 21183704
Alignment:
Q  25 ttcctcatgtatacggtagtcattttc-accctggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||| |||||| ||  ||| |||||| ||||||||||  || ||||||||||||||    
T  21183775 ttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttt 21183704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 19987149 - 19987195
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcac 53  Q
    ||||||||||||||||||||||| ||||||| ||||  |||||||||    
T  19987149 tttggtgttaggtggggattccttatgtatatggtaaccattttcac 19987195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 20611924 - 20611960
Alignment:
Q  154 ggcctcttttcatttccagagccgagcctccgaattc 190  Q
    |||||||||||| || |||||||||||||||||||||    
T  20611924 ggcctcttttcacttacagagccgagcctccgaattc 20611960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 30121783 - 30121835
Alignment:
Q  40 gtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttat 91  Q
    ||||| ||||||||| | ||||||| |||||||||| ||||||||||||||||    
T  30121783 gtagtgattttcacctttggatgtatcgcatatatatgacaccttgtatttat 30121835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 44655737 - 44655936
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||       |||    
T  44655737 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 44655836  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||        |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||    
T  44655837 aaatagaacattgctcttttaaaaaaattatgttttgattttatcactggtctcttttcatttccagagccgagcctccgaattctcagggacggccctg 44655936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 7 - 202
Target Start/End: Original strand, 50881426 - 50881621
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||| | |||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||       |||    
T  50881426 tttggtgttaggtggaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 50881525  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    |||||||||||||||||||         || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  50881526 aaatagaacattgctcttttaaaaaaa-tagattttaattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 50881621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 14146296 - 14146495
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttca-ccctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  14146296 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 14146395  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||| |||||||         ||  |||||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||    
T  14146396 aaatagaacatcgctcttttaaaaaaaatacgttttgattttatcactggcctcttttcattccaagagccgagcctccgaattctcagggacggccctg 14146495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 17168952 - 17169151
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||||||||  ||| |||||||||||||||| ||||||| |||||||||||       |||    
T  17168952 tttggtgttaggtaggggttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatatatacaacaccttatatttatcttttaaaaaatat 17169051  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||||||| |||         ||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||    
T  17169052 aaatagaacattgctttttttaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattcttagggacggccctg 17169151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 23185423 - 23185622
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||       |||    
T  23185423 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 23185522  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||  |||||||||||||||||||||||||||| | |  |||||||||||||||||||| ||  |||||||||    
T  23185523 aaatagaacattgctcttttaaaaaaaatacgttttgattttatcactggcctcttttcaatcctcgagccgagcctccgaattctcaggaacggccctg 23185622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 191
Target Start/End: Original strand, 16140055 - 16140236
Alignment:
Q  11 gtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| |||||||||||||||||||       |||||||    
T  16140055 gtgttaggtggggattcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaaaatataaat 16140154  T
Q  110 agaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    |||||||  ||||||         ||  ||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  16140155 agaacatcactcttttaaaaaaaatacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattct 16140236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 5316676 - 5316875
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  5316676 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5316775  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||  ||||||||||||||||| |||||||||||| | |  | ||||||||| |||||| || ||||||||||    
T  5316776 aaatagaacattgctcttttaaaaaaaatacgttttgattttatcactgacctcttttcattcctaaggtcgagcctccaaattctcagggacggccctg 5316875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 5027545 - 5027746
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||       |||    
T  5027545 tttggtgttaggtgggggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5027644  T
Q  106 aaatagaacattgctctttnnnnnnnnttata--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    |||||||||||||||||||          |||  |||||||||||||||||||||||||||||| || ||| |||||||||||||||| || ||||||||    
T  5027645 aaatagaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattccccgagtcgagcctccgaattctcagggacggccc 5027744  T
Q  204 tg 205  Q
    ||    
T  5027745 tg 5027746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 9173140 - 9172939
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||       |||    
T  9173140 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9173041  T
Q  106 aaatagaacattgctcttt-nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||||| | |||          || ||||| | |||||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  9173040 aaatagaacattgttttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 9172941  T
Q  205 gg 206  Q
    ||    
T  9172940 gg 9172939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 9181122 - 9180921
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||       |||    
T  9181122 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9181023  T
Q  106 aaatagaacattgctcttt-nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||||| | |||          || ||||| | |||||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  9181022 aaatagaacattgttttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 9180923  T
Q  205 gg 206  Q
    ||    
T  9180922 gg 9180921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 6771787 - 6771989
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  6771787 tttggtgttaggtggaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 6771886  T
Q  106 aaatagaacattgctcttt---nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    ||||||||||| |||||||             |  |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||    
T  6771887 aaatagaacatcgctctttaaaaaaaaaaaacacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggcc 6771986  T
Q  203 ctg 205  Q
    |||    
T  6771987 ctg 6771989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 4971735 - 4971536
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcac-cctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||   ||| |||||||||||||||||  |||||||||||||||||       |||    
T  4971735 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaatat 4971636  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||| |||||||||||||||||| ||||||||||| || || ||||||||| ||||||| || ||| ||||||    
T  4971635 aaatagaacattgctctttaaaaaaaaatatgttttgattttatcactggtctcttttcattccccgaaccgagcctcagaattctcagggacagccctg 4971536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 41697254 - 41697072
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcac-cctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||| || ||||||||||||||       |||    
T  41697254 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaatat 41697155  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaat 188  Q
    ||||||||||| |||||||         ||  ||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  41697154 aaatagaacatcgctcttttaaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcttccgaat 41697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 1366995 - 1366796
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttca-ccctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| |  ||| ||||||||||||||||| |||||| |||||||||||       |||    
T  1366995 tttggtgttaggtgggggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 1366896  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||| ||         ||| |||| | ||||||||||||||||||||||| ||||||| |||||||| |||||  |||||||||||||    
T  1366895 aaatagaacattgctc-ttaaaaaaaaatatgttttcaatttatcactggcctcttttcattcccagagctgagcctccaaattcgtagagacggccctg 1366797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 19955713 - 19955912
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||  ||| |||||||||||||||||  ||||| |||||||||||       |||    
T  19955713 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatat 19955812  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||| ||||||| |||         |   ||||||||||||||||||||||||||||||  |||||||||||||||||||||| || ||| ||||||    
T  19955813 aaatagatcattgctttttaaaaaaaaattcgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacagccctg 19955912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 27559635 - 27559747
Alignment:
Q  9 tggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataa 107  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||       |||||    
T  27559635 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataa 27559734  T
Q  108 atagaacattgct 120  Q
    |||||||||||||    
T  27559735 atagaacattgct 27559747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 40501907 - 40501707
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||| | ||| |||||||||||||||||||||| ||| | || |||||||||||||||||||||||| |||||||||||       |||    
T  40501907 tttggtgttaggtggaggttcttcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 40501808  T
Q  106 aaatagaacattgc-tctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||| |||| | | |||         ||  ||||||||||||||||| ||||||||||||  ||||| |||||||||||||||| || |||||||||    
T  40501807 aaatagatcattactttttttttaaaaaatacgttttgattttatcactgacctcttttcattctcagagtcgagcctccgaattcttagggacggccct 40501708  T
Q  205 g 205  Q
    |    
T  40501707 g 40501707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 32 - 205
Target Start/End: Complemental strand, 21741029 - 21740852
Alignment:
Q  32 tgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctttnnnnnn 130  Q
    |||||| |||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||       || |||||||||||||||||||          
T  21741029 tgtatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctcttttaaaaa 21740930  T
Q  131 nnt---tatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
          || |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |  ||||||||||    
T  21740929 aaaaaatacattttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcaaggacggccctg 21740852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 27906834 - 27906646
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||             || ||||||||||||||||||       |||    
T  27906834 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgg------------cggcaccttgtatttatcttttaaaaaatat 27906747  T
Q  106 aaatagaacattgctctttnnnnnnnn-ttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||| ||||||||||||||         |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  27906746 aaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccct 27906647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 3406414 - 3406532
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | |  ||||| ||||||||||| ||||||||||||||||||       |||    
T  3406414 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatat 3406513  T
Q  106 aaatagaacattgctcttt 124  Q
    ||||||||||| |||||||    
T  3406514 aaatagaacatcgctcttt 3406532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 3440406 - 3440288
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | |  ||||| ||||||||||| ||||||||||||||||||       |||    
T  3440406 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatat 3440307  T
Q  106 aaatagaacattgctcttt 124  Q
    ||||||||||| |||||||    
T  3440306 aaatagaacatcgctcttt 3440288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 13913599 - 13913401
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccctg-gatgtaccgcatatatac--gacaccttgtatttatctttnnnnnnnt 103  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||  |  | ||||||||||||||||  | || ||| |||||||||||       |    
T  13913599 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatcttttaaaaaat 13913500  T
Q  104 ataaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    ||||||||| ||||||| |||         || |||||||||||||||||||| ||||||||||  ||||||| |||||||||||||| || |||||||    
T  13913499 ataaatagatcattgcttttttaaaaaaaatacattttgattttatcactggcatcttttcattctcagagccaagcctccgaattcttagggacggcc 13913401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 207
Target Start/End: Original strand, 6889634 - 6889807
Alignment:
Q  34 tatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctttnnnnnnnn 132  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||| || ||||||||||||||       ||||||||||||||||||||||            
T  6889634 tatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaa 6889733  T
Q  133 ttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctggt 207  Q
     ||  ||||||||||||||||| ||||||||||||  |||| ||||||||||||||| | |  ||||||||||||    
T  6889734 -tacgttttgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctggt 6889807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 207
Target Start/End: Original strand, 6891480 - 6891653
Alignment:
Q  34 tatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctttnnnnnnnn 132  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||| || ||||||||||||||       ||||||||||||||||||||||            
T  6891480 tatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaa 6891579  T
Q  133 ttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctggt 207  Q
     ||  ||||||||||||||||| ||||||||||||  |||| ||||||||||||||| | |  ||||||||||||    
T  6891580 -tacgttttgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctggt 6891653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 51607557 - 51607374
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgac-accttgtatttatctttnnnnnnnta 104  Q
    |||||| |||| ||||  |||||||||||||||||||||||||||||  | || ||||||||||||||||| | ||||| |||||||||||       ||    
T  51607557 tttggtattagatgggagttcctcatgtatacggtagtcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatcttttaaaaaata 51607458  T
Q  105 taaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaatt 189  Q
    |||||| ||||||  | |||        | |  ||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  51607457 taaataaaacattttttttttaaaaaaat-acgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatt 51607374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 34247155 - 34247208
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  34247155 ttttgattttatcactgaccttttttcatttccagagccgagcctccgaattct 34247208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 22865445 - 22865378
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||| || |||||||||||| ||||||||| ||||||||||||| || ||||||||||    
T  22865445 ttttgattttatcattgacctcttttcattcccagagccgtgcctccgaattctcagggacggccctg 22865378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 26803965 - 26804030
Alignment:
Q  28 ctcatgtatacggtagtcattttcaccctggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||||||| ||||||||| ||  |||| ||||||||||||||| |||||||||||||||    
T  26803965 ctcatgtatacggtagtgattttcaccttg--tgtatcgcatatatacgacatcttgtatttatcttt 26804030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 44895648 - 44895695
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc 54  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||    
T  44895648 tttggtgttaggtgggggttcctcatgtatacggtaatcattttcacc 44895695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 38853539 - 38853604
Alignment:
Q  28 ctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatc 92  Q
    ||||||||||||||||| ||||||||| | |||| |||  ||||||||||||||||||||||||||    
T  38853539 ctcatgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatc 38853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 5533326 - 5533397
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccctgga-tgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||| ||||||||| | || |||||  |||||||||| |||||||| |||||||||    
T  5533326 ttcctcatgtatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttt 5533397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 43235869 - 43235798
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||||| |||| ||||||||| | || |||||  ||||||||||||| |||||||||||||||    
T  43235869 ttcctcatgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatcttt 43235798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 45758508 - 45758579
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||| |||||||||  ||||||||   ||||||||| |||||||| ||||||||||    
T  45758508 ttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttt 45758579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 35392295 - 35392352
Alignment:
Q  36 tacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatc 92  Q
    ||||||||| ||||||||| | |||| ||||||||||||||| |||||||||||||||    
T  35392295 tacggtagtgattttcacctttggatataccgcatatatacggcaccttgtatttatc 35392352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 3406547 - 3406614
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||| |||||||||||| |||||||||||| || |||| |||||||| |||||| || ||| ||||||    
T  3406547 ttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagccctg 3406614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 3440273 - 3440206
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||| |||||||||||| |||||||||||| || |||| |||||||| |||||| || ||| ||||||    
T  3440273 ttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagccctg 3440206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 33170776 - 33170839
Alignment:
Q  28 ctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtattta 90  Q
    ||||||||||||||||| |||||||||  | | |||||||||||||||| |||| |||||||||    
T  33170776 ctcatgtatacggtagtgattttcaccatttggtgtaccgcatatatacaacacattgtattta 33170839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 38547135 - 38547064
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||| | |||| ||||||||  | || |||||| |||||||||| ||||||||||||||||||    
T  38547135 ttcctcatgtatatgatagtgattttcacatttgggtgtaccacatatatacggcaccttgtatttatcttt 38547064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 44895776 - 44895836
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagac 198  Q
    |||||||||| |||| | |||||||||||| ||||| |||| |||||||||| | ||||||    
T  44895776 ttttgattttttcaccgacctcttttcattcccagaaccgaacctccgaatttttagagac 44895836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 50146424 - 50146476
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattc 190  Q
    |||| |||||||||  || ||| |||||||| |||||||||||||||||||||    
T  50146424 tttttattttatcatgggtctcgtttcatttacagagccgagcctccgaattc 50146476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 8e-59; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 38681211 - 38681011
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||       |||    
T  38681211 tttggtgttaggtggggtttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaatat 38681112  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||||||||||| |||        |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  38681111 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 38681012  T
Q  205 g 205  Q
    |    
T  38681011 g 38681011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 54619321 - 54619121
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  54619321 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 54619222  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||||||||||| |||        |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||| || |||||||||    
T  54619221 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcattggcttcttttcatttccagagccgagcctccgaattctcagggacggccct 54619122  T
Q  205 g 205  Q
    |    
T  54619121 g 54619121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 43207355 - 43207157
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntata 106  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||| |||||||||||       ||||    
T  43207355 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgatgtaccgcatatatacggcaccttatatttatcttttaaaaaatata 43207256  T
Q  107 aatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||||||||||         ||  |||| | ||||||||||||||||||||||| |||||||||||||||| |||||| || ||||||||||    
T  43207255 aatagaacattgctcttttaaaaaaaatacgtttttaatttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccctg 43207157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 21582759 - 21582962
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  21582759 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21582858  T
Q  106 aaatagaacattgctctttnnnnnnnnttata--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    ||||| ||||||| |||||          |||  |||||||||||||||||||||||||||||| ||| ||||||||||||||||||| || ||||||||    
T  21582859 aaataaaacattgttcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaagccgagcctccgaattctcagggacggccc 21582958  T
Q  204 tggt 207  Q
    ||||    
T  21582959 tggt 21582962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 8073455 - 8073257
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||  | || ||||||||||||||||||||||||||||||||||||       |||    
T  8073455 tttggtgttatgtgggg-ttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 8073357  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||| ||||||         ||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||    
T  8073356 aaatagaacattactcttttaaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccctg 8073257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 7 - 204
Target Start/End: Complemental strand, 3954014 - 3953816
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  3954014 tttggtgttaggtgggggttcctcatgtatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3953915  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||||| |||||         || ||||| ||||||||||||||||||||||||||||||||| || |||||||||||| || |||||||||    
T  3953914 aaatagaacattgttcttttaaaaaaaatacattttaattttatcactggcctcttttcatttccagagcggaacctccgaattctcagggacggccct 3953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 36716143 - 36715942
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| | ||||| ||||||||| ||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  36716143 tttggtgttaggtgggggtccctcacgtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 36716044  T
Q  106 aaatagaacattgctcttt--nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    |||||||||||||||||||          |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  36716043 aaatagaacattgctcttttaaataaaaattatgtttttattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccc 36715944  T
Q  204 tg 205  Q
    ||    
T  36715943 tg 36715942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 47467672 - 47467874
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||       |||    
T  47467672 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatat 47467771  T
Q  106 aaatagaacattgctcttt-nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||| |||||||           |  ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || |||||||||    
T  47467772 aaatagaacatcgctctttaaaaaaaaaacacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 47467871  T
Q  205 ggt 207  Q
    |||    
T  47467872 ggt 47467874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 27078687 - 27078486
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||| |||| | ||||||||||||||| ||| ||||||||||||||       |||    
T  27078687 tttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatat 27078588  T
Q  106 aaatagaacattgctcttt--nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    ||||||||||||||| |||          |||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||    
T  27078587 aaatagaacattgcttttttaaaaaaaaattatgttttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccc 27078488  T
Q  204 tg 205  Q
    ||    
T  27078487 tg 27078486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 27084484 - 27084283
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||| |||| | ||||||||||||||| ||| ||||||||||||||       |||    
T  27084484 tttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatat 27084385  T
Q  106 aaatagaacattgctcttt--nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    ||||||||||||||| |||          |||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||    
T  27084384 aaatagaacattgcttttttaaaaaaaaattatgttttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccc 27084285  T
Q  204 tg 205  Q
    ||    
T  27084284 tg 27084283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 18372467 - 18372670
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtac----cgcatatatacgacaccttgtatttatctttnnnnnn 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||  |||||    |||||||||||||||||||||||||||||||          
T  18372467 tttggtgttagatggggattcctcatgtatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgtatttatcttttaaaaa 18372566  T
Q  102 ntataaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggc 201  Q
     ||||||||||||||||||||||         ||  ||||||||||||||||| |||||||||||| |||| | |||||||||||||||| | ||||||     
T  18372567 atataaatagaacattgctcttttaaaaaaaatacgttttgattttatcactgacctcttttcattcccagtgtcgagcctccgaattctcaaagacggt 18372666  T
Q  202 cctg 205  Q
    ||||    
T  18372667 cctg 18372670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 44708465 - 44708660
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||| ||||||||| |||||| |||||||||||       |||    
T  44708465 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaatat 44708564  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggc 201  Q
    |||||||||||| || |||         ||  |||||||||||||||||||||||||||||| ||||||  ||||||||||||||| || ||||||    
T  44708565 aaatagaacatttctttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagttgagcctccgaattcttagggacggc 44708660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 42098789 - 42098989
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||||||||| || ||| |||||||||||||||||||||||||||||| |||  | ||||||||||||||| ||||||||||||||||||       |||    
T  42098789 tttggtgttaagtaggggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 42098888  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||| |||| |||          | |||||||||||||||||||||||||||||||||| |||| |||||| |||||||| || |||||||||    
T  42098889 aaatagaacatcgctcttttaaaaaaaaagacattttgattttatcactggcctcttttcatttcccgagctgagccttcgaattctcagggacggccct 42098988  T
Q  205 g 205  Q
    |    
T  42098989 g 42098989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 50258731 - 50258535
Alignment:
Q  18 gtggggattcctcatgtatacggtagtcattttcaccct--ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaaca 115  Q
    |||||| ||||||||| ||||  ||||||||||||||||  || |||||||||||||||||||||||||||||||| |||       |||||||||||||    
T  50258731 gtgggggttcctcatgcatacaatagtcattttcaccctccgggtgtaccgcatatatacgacaccttgtatttattttttaaaaaatataaatagaaca 50258632  T
Q  116 ttgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctggtgctta 212  Q
    | |||||||         ||| |||||||||||||||||  |||||||| || ||||||||||||||||||||||| ||  ||||||||| ||||||    
T  50258631 tcgctctttttaaaaaaatatgttttgattttatcactgatctcttttcgttcccagagccgagcctccgaattctcaggaacggccctgctgctta 50258535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 34290754 - 34290554
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||  ||| ||||||||||||||||| |||||| |||||||||||       |||    
T  34290754 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 34290655  T
Q  106 aaatagaacattg-ctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||||||||  | |||         ||  ||||||||||||||||| | |||||||||| ||||||||||||||||||||||| |  |||||||||    
T  34290654 aaatagaacattgtttttttaaaaaaaaatacgttttgattttatcactgacttcttttcattcccagagccgagcctccgaattcttaaggacggccct 34290555  T
Q  205 g 205  Q
    |    
T  34290554 g 34290554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 50939351 - 50939152
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||||||||||| |||| |||||||||||||||||||||||||| ||| | || ||||||  ||||||||| |||||| |||||||||||       |||    
T  50939351 tttggtgttaggcgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaatat 50939252  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||| ||||||| |||         ||  ||||||||||||||||||||||||||||||  |||||||||||| ||||||||| || ||||||||||    
T  50939251 aaatagatcattgctttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcccccgaattcttagggacggccctg 50939152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 53507002 - 53506801
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||  ||| |||||||||||||||||  ||||| |||||||||||       |||    
T  53507002 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatat 53506903  T
Q  106 aaatagaacattgctcttt--nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    ||||||||||||| | |||           ||| ||||||||||||||||||||||| |||||| |||||||||||||| |||||||| || ||||||||    
T  53506902 aaatagaacattgtttttttaaaaaaaaaatatgttttgattttatcactggcctctcttcattcccagagccgagccttcgaattcttag-gacggccc 53506804  T
Q  204 tgg 206  Q
    |||    
T  53506803 tgg 53506801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 54407275 - 54407073
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| || || |||||||||||||||||||||||| | |||||||||||||||||||| |||||| |||||||||||       |||    
T  54407275 tttggtgttaggtgggggttact-atgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 54407177  T
Q  106 aaatagaacattgctctttnnnnnnnnttata----ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggc 201  Q
    ||||||||||||| | |||          | |    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || ||||||    
T  54407176 aaatagaacattgttttttttttaaaaaaaaaaacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggc 54407077  T
Q  202 cctg 205  Q
    ||||    
T  54407076 cctg 54407073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 53149432 - 53149235
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttca-ccctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | | |||  ||||||||||||||||| ||||||||||||||||||       |||    
T  53149432 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 53149333  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    ||||||||||| |||| |||          |  |||||||||||||||||| ||||||||||| || || | ||||||||||||||| ||||||||||    
T  53149332 aaatagaacatcgctcttttaaaaaaaaaaacgttttgattttatcactggtctcttttcattccccgaactgagcctccgaattctcagagacggcc 53149235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 37168359 - 37168551
Alignment:
Q  11 gtgttaggtggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaat 109  Q
    ||||||||||||  |||||||||||||||||||||||||||||| | || | |||| |||||||||| |||||| |||||||||||       |||||||    
T  37168359 gtgttaggtgggagttcctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaatataaat 37168458  T
Q  110 agaacattgctctttnnnnnnnnt-tatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggc 201  Q
    ||||||||| | |||          ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||    
T  37168459 agaacattgtttttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggc 37168551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 29620504 - 29620423
Alignment:
Q  9 tggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtattt 89  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  29620504 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 36605973 - 36606149
Alignment:
Q  27 cctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnn-tataaatagaacattgctcttt 124  Q
    |||||||||||||||||| ||||||| | |||| ||||||||||||||||| ||||||||||||||||||        |||||||||||||||||||| |    
T  36605973 cctcatgtatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctctat 36606071  T
Q  125 nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
             ||  ||||||||||||||||| ||||||||||||||||||||||| |||||||||| | || |||||||    
T  36606072 taaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgaacctccgaattttcagggacggcc 36606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 29620426 - 29620363
Alignment:
Q  143 attttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctgg 206  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||| || |||||||||||    
T  29620426 attttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctgg 29620363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 9878805 - 9878687
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||| ||||| ||||| ||||| ||||||||| ||||||||||||||  ||| ||||||||||||||||  |||||| |||||||||||       |||    
T  9878805 tttggcgttagatgggggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaatat 9878706  T
Q  106 aaatagaacattgctcttt 124  Q
    |||||||| ||||||||||    
T  9878705 aaatagaatattgctcttt 9878687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 48720496 - 48720429
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||| |||||| || ||||||||||    
T  48720496 ttttgattttatcacttacctcttttcattcccagagccgagcctcccaattcttagggacggccctg 48720429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 28689463 - 28689390
Alignment:
Q  23 gattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||| ||||||||||||| ||| ||||||||| | |||| || |||||||||||| ||||||||||||||||||    
T  28689463 gatttctcatgtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatcttt 28689390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 48157249 - 48157302
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    |||||||||||||||||||||||||| ||| || || |||||||||||||||||    
T  48157249 ttttgattttatcactggcctctttttattcccggaaccgagcctccgaattct 48157302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 95
Target Start/End: Complemental strand, 23641382 - 23641347
Alignment:
Q  60 tgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||||||||||| ||||||||||||||    
T  23641382 tgtaccgcatatatacgacacattgtatttatcttt 23641347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 48157127 - 48157174
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc 54  Q
    |||| ||||| |||||| |||||||||||||| |||||||||||||||    
T  48157127 tttgatgttaagtgggggttcctcatgtatacagtagtcattttcacc 48157174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 49393099 - 49393166
Alignment:
Q  28 ctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||||||| ||||| ||| | || |||||  |||||||||||| ||||||||||||||||    
T  49393099 ctcatgtatacggtagtaatttttacctttgggtgtaca-catatatacgacgccttgtatttatcttt 49393166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 4505878 - 4506078
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  4505878 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 4505977  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||||||||||| |||        |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  4505978 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 4506077  T
Q  205 g 205  Q
    |    
T  4506078 g 4506078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 12337566 - 12337365
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| |||||||| ||||||||||||||||||||       |||    
T  12337566 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatat 12337467  T
Q  106 aaatagaacattgctcttt--nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||    
T  12337466 aaatagaacattgctcttttaaaaaaaaattatattttgattttatcactggcctcttttcatttccagagccgagccttcgaattctcagggacggccc 12337367  T
Q  204 tg 205  Q
    ||    
T  12337366 tg 12337365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 7 - 202
Target Start/End: Original strand, 6964991 - 6965186
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||       |||    
T  6964991 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatat 6965090  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    |||||||||||||||||||         | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  6965091 aaatagaacattgctcttttaaaaaaaat-tattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 6965186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 3155201 - 3155401
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| || | ||||||||||||||||| ||||||||||||||||||       |||    
T  3155201 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3155300  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||||||||||| |||        |||| |||| |||||||||||| |||||||||||||  | ||||||||||||||||||| || |||||||||    
T  3155301 aaatagaacattgctcttttaaaaaaaattatgttttaattttatcactgacctcttttcatttttaaagccgagcctccgaattctcagggacggccct 3155400  T
Q  205 g 205  Q
    |    
T  3155401 g 3155401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 8907197 - 8906995
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| || ||||||||||||||||||||||| ||| |||| ||||||||||||||||| | ||||||||||||||||       |||    
T  8907197 tttggtgttaggtgggggtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatcttttaaaaaatat 8907098  T
Q  106 aaatagaacattgctcttt--nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    |||||||||||| ||||||          |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||  |||||||    
T  8907097 aaatagaacattactcttttaaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcaggaacggccc 8906998  T
Q  204 tgg 206  Q
    |||    
T  8906997 tgg 8906995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 29939980 - 29939781
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||        |||    
T  29939980 tttggtgttaggtggtggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaatat 29939881  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||  ||||||||||||||||| |||||||| ||| |||||||||||||| |||||||| || ||||| ||||    
T  29939880 aaatagaacattgctcttttaaaaaaaatacgttttgattttatcactgacctctttttattcccagagccgagccttcgaattctcagggacggtcctg 29939781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 3952990 - 3953188
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||||||| |||| |||||||||| |||||| ||||||||||||||||||       |||    
T  3952990 tttggtgttaggtgggggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatcttttaaaaaatat 3953089  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||| | |||||         || |||||||||||||||||| |||||||||||||||| |||||||||||| |||||| || |||| |||||    
T  3953090 aaatagaacatcggtctttaaaaaaaa-tacattttgattttatcactgacctcttttcatttccaaagccgagcctccaaattctcagggacgaccctg 3953188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 27506858 - 27506659
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||  |||||||||||||| ||||||||||| ||| | || |||||| |||||||||| |||||| |||||||||||       |||    
T  27506858 tttggtgttaggtgggagttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatat 27506759  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||| ||||||| |||         ||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||| || ||||||||||    
T  27506758 aaatagatcattgcttttttttaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccctg 27506659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 55 - 201
Target Start/End: Original strand, 40636171 - 40636317
Alignment:
Q  55 ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctttnnnnnnnnttatattttgattttatcactg 154  Q
    |||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||         ||| |||||||||||||||||    
T  40636171 ctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaatatgttttgattttatcactg 40636270  T
Q  155 gcctcttttcatttccagagccgagcctccgaattctaagagacggc 201  Q
    ||||||||||||| ||||||| ||||||||||||||| || ||||||    
T  40636271 gcctcttttcattcccagagctgagcctccgaattctcagggacggc 40636317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 10762683 - 10762488
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||| |||||||||  |||||| |||||||||||       |||    
T  10762683 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatat 10762584  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    |||||||||||||||||||          |  |||| ||||||||||||||||||||||||| ||||||| |||||||| |||||| || |||||||    
T  10762583 aaatagaacattgctctttaaaaaaaa-aacgttttaattttatcactggcctcttttcattcccagagctgagcctccaaattcttagggacggcc 10762488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 7162768 - 7162967
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||||||| |||  | ||||||||||||||| ||||||||||||||||||       |||    
T  7162768 tttggtgttaggtaggggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 7162867  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||| |||||||          | ||||| ||||||||||||||||||||||||| || |||| |||||| |||| ||| || ||||||||||    
T  7162868 aaatagaacatcgctcttttaaaaaaaagacattttaattttatcactggcctcttttcattccccgagctgagccttcgaaatctcagggacggccctg 7162967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 9046017 - 9046214
Alignment:
Q  11 gtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatc-tttnnnnnnntataaa 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||| |||||||| |||       ||||||    
T  9046017 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaa 9046116  T
Q  109 tagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctgg 206  Q
    |||||||||| |||||         ||  |||||||||||||||||||||||||| ||| ||||||| |||||  ||||||||  | |||||||||||    
T  9046117 tagaacattgttcttttaaaaacaatacgttttgattttatcactggcctcttttaattcccagagctgagccaacgaattctttgggacggccctgg 9046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 24410420 - 24410623
Alignment:
Q  7 tttggtgttaggtgggga-ttcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnnta 104  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||| |||||||||||       ||    
T  24410420 tttggtgttaggtggggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 24410519  T
Q  105 taaatagaacattgctcttt---nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggc 201  Q
    |||||||||||||| | |||            ||  |||||||||||||||||||||||||||||| ||| | ||||||||||||||||| || ||||||    
T  24410520 taaatagaacattgttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaaaccgagcctccgaattcttagggacggc 24410619  T
Q  202 cctg 205  Q
    ||||    
T  24410620 cctg 24410623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 26716116 - 26716313
Alignment:
Q  11 gtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatc-tttnnnnnnntataaa 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||| | |||||| |||||||| |||       ||||||    
T  26716116 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaa 26716215  T
Q  109 tagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||||| |||         ||  ||||||||||||||||| |||||||||||| ||| |||||||||  |||||||| || ||||||||||    
T  26716216 tagaacattgctcttttaaaaaaaaatacgttttgattttatcactgacctcttttcattcccaaagccgagccaacgaattcttagggacggccctg 26716313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 34693991 - 34694155
Alignment:
Q  39 ggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctttnnnnnnnnttata 137  Q
    |||||||||||| ||| |||| |||||| |||||||||| ||||||||||||||||||       ||||||||||||||||||||||         ||      
T  34693991 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaatacg 34694090  T
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    ||||||||||||||| |||||||||||||||||||| |||| |||||||||||| || |||||||    
T  34694091 ttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34694155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 34716403 - 34716567
Alignment:
Q  39 ggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctttnnnnnnnnttata 137  Q
    |||||||||||| ||| |||| |||||| |||||||||| ||||||||||||||||||       ||||||||||||||||||||||         ||      
T  34716403 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaatacg 34716502  T
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    ||||||||||||||| |||||||||||||||||||| |||| |||||||||||| || |||||||    
T  34716503 ttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 1396689 - 1396631
Alignment:
Q  133 ttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1396689 ttatgttttgattttatcactggcctcttttcatttccagagtcgagcctccgaattct 1396631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 191
Target Start/End: Complemental strand, 5952784 - 5952650
Alignment:
Q  55 ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctttnnnnnnnnttatattttgattttatcactg 154  Q
    |||| ||||||||||||||||| ||||||||||||||||||        ||||||| |||||||||||||         ||  |||||||||||||| ||    
T  5952784 ctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaa--ataaatataacattgctcttttaaaaaaaatacgttttgattttatcattg 5952687  T
Q  155 gcctcttttcatttccagagccgagcctccgaattct 191  Q
    ||||||||||||| | |||||||| ||||||||||||    
T  5952686 gcctcttttcattccgagagccgaacctccgaattct 5952650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 38400800 - 38400871
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccctgga-tgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||| ||||||||| | || |||| |||||||||| ||||||||||||||||||||    
T  38400800 ttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttt 38400871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 190
Target Start/End: Original strand, 16097010 - 16097176
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctt 123  Q
    ||||||||||||| |||||| ||||||||| | || |||||  |||||||||| ||||||||||||||||||       | |||||||||||||| ||||    
T  16097010 ttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttctt 16097109  T
Q  124 tnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattc 190  Q
    |         || || || ||||||| || |||| ||||||| || ||||||||||||||| |||||    
T  16097110 ttaaacaaaatacatatttattttattacgggccacttttcacttacagagccgagcctccaaattc 16097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 8327734 - 8327785
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaatt 189  Q
    |||||||||||||||||  ||||||||||||||||| | |||||||||||||    
T  8327734 ttttgattttatcactgatctcttttcatttccagaactgagcctccgaatt 8327785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 21665800 - 21665729
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccctg-gatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||| ||||||||  |  |||||| | ||||||||||||||| |||||||||||||    
T  21665800 ttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttt 21665729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 28425810 - 28425739
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||| |||| |||||| ||||||||  | || ||||| ||||||||||||||||||||||||||||||    
T  28425810 ttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttt 28425739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 37182672 - 37182739
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttat 91  Q
    |||||||||||||||||||| ||||||||  | || ||||  ||||||||||||||||||||||||||    
T  37182672 ttcctcatgtatacggtagtgattttcacttttgggtgtattgcatatatacgacaccttgtatttat 37182739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 24035647 - 24035574
Alignment:
Q  23 gattcctcatgtatacggtagtcattttcaccctg-gatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||| ||||||| ||||||||| |  | |||| ||||| |||||| ||||||||||||||||||    
T  24035647 gattcctcatgtatgcggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttt 24035574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 7742234 - 7742163
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||| ||||| ||||  |||||||| | ||||||| |||||||||| ||||| ||||||||||||||    
T  7742234 ttcctcatgcatacgatagtatttttcacctttggatgtaacgcatatatatgacacattgtatttatcttt 7742163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 12134140 - 12134069
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||| |||||||||||||| ||||||||  | || |||| ||||||||||||  |||||||||||||||||    
T  12134140 ttcctaatgtatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttt 12134069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 12694791 - 12694847
Alignment:
Q  134 tatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattc 190  Q
    |||||||| ||||||| || || ||||||||| || |||||||||||||||| ||||    
T  12694791 tatatttttattttattacgggtctcttttcacttacagagccgagcctccggattc 12694847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 95
Target Start/End: Complemental strand, 16227425 - 16227397
Alignment:
Q  67 catatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||||||||||||    
T  16227425 catatatacgacaccttgtatttatcttt 16227397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 3e-55; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 18776883 - 18776681
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcac-cctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||  |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  18776883 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 18776784  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||||||||||| |||        |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||    
T  18776783 aaatagaacattgctcttttaaaaaaaattatattttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccct 18776684  T
Q  205 ggt 207  Q
    |||    
T  18776683 ggt 18776681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 7 - 206
Target Start/End: Original strand, 29077205 - 29077405
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||       |||    
T  29077205 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 29077304  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||  ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  29077305 aaatagaacattgctcttttaaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29077404  T
Q  206 g 206  Q
    |    
T  29077405 g 29077405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 8171656 - 8171460
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttca-ccctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  8171656 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 8171557  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    |||||||||||||||||||         ||   |||||||||||||||| |||||||||||| ||||||||||||||||||||||| || |||||||    
T  8171556 aaatagaacattgctcttttaaaaaaaatacgctttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggcc 8171460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 12596404 - 12596206
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||| |||| |||||| |||||||||| ||||||||||||||||||       |||    
T  12596404 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatat 12596305  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||| |||||||          |  |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  12596304 aaatagaacatcgctctttaaaaaaaa--acgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 12596207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 23551188 - 23550988
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatc-tttnnnnnnnta 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| |||       ||    
T  23551188 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaaata 23551089  T
Q  105 taaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||| ||||||| |||         ||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||| || |||| ||||    
T  23551088 taaatagatcattgctttttttaaaaaaatatgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacgaccct 23550989  T
Q  205 g 205  Q
    |    
T  23550988 g 23550988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 20091398 - 20091197
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||| |||||||||||       |||    
T  20091398 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 20091299  T
Q  106 aaatagaacattgctctttnnnnnnnnttata--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    ||||||| ||||| | |||          |||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||| || ||||||||    
T  20091298 aaatagatcattgttttttttaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccc 20091199  T
Q  204 tg 205  Q
    ||    
T  20091198 tg 20091197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 10329527 - 10329327
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||||||||| |||||| || ||||||||||||||||||||||||||| | || | | || |||||||||| |||||| |||||||||||       |||    
T  10329527 tttggtgttaagtgggggtttctcatgtatacggtagtcattttcacctttgggttttcctcatatatacggcaccttatatttatcttttaaaaaatat 10329428  T
Q  106 aaatagaacattgctctttnnnnnnnnt-tatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||||||| |||          ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||  ||||||||    
T  10329427 aaatagaacattgcttttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaggaacggccct 10329328  T
Q  205 g 205  Q
    |    
T  10329327 g 10329327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 10955469 - 10955587
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||  ||||||||||||||||| |||||| |||||||||||       |||    
T  10955469 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 10955568  T
Q  106 aaatagaacattgctcttt 124  Q
    ||||||||||| |||||||    
T  10955569 aaatagaacatcgctcttt 10955587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 48983961 - 48983756
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||  ||| |||||||||||||||||||||||| |||||||||||       |||    
T  48983961 tttggtgttaggtgggggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 48983862  T
Q  106 aaatagaacattgctcttt------nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacg 199  Q
    ||||||| ||||| | |||               ||  |||||||||||||| |||||||||||||||  |||||||||||||||||||||| || ||||    
T  48983861 aaatagatcattgttttttttaaaaaaaaaaaaatacgttttgattttatcattggcctcttttcattctcagagccgagcctccgaattcttagggacg 48983762  T
Q  200 gccctg 205  Q
    ||||||    
T  48983761 gccctg 48983756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 38414993 - 38414793
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||  ||| |||||| |||||||||| |||||| |||||||||||       ||     
T  38414993 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaatac 38414894  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||| |||||| |||         ||  |||||||||||| ||| | |||||||||||||||||| |||||||||||||||| || |||| ||||    
T  38414893 aaatagaacgttgctcttttgcaaaaaaatacgttttgattttatgactagtctcttttcatttccagagtcgagcctccgaattcttagggacgaccct 38414794  T
Q  205 g 205  Q
    |    
T  38414793 g 38414793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 19692079 - 19692281
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||||||||||| | || |||||||||||||||  |||||||||||||  | | ||||||||||||||| | |||||| |||||||||||       |||    
T  19692079 tttggtgttaggcgagggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaatat 19692178  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||||||||||| |||         ||  |||||||||||||||||| | |||||||||||||||||||||| |||||||||| || || ||||||    
T  19692179 aaatagaacattgctcttttaaaaaaaaatacgttttgattttatcactggacacttttcatttccagagccgagcttccgaattcttagggagggccct 19692278  T
Q  205 ggt 207  Q
    |||    
T  19692279 ggt 19692281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 24525802 - 24525599
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcac-cctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||   ||| ||||||||||||| ||| |||||| |||||||||||       |||    
T  24525802 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaatat 24525703  T
Q  106 aaatagaacattgctctt----tnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggc 201  Q
    ||||||||||||| | ||              ||  ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || |||| |    
T  24525702 aaatagaacattgtttttaaaaaaaaaaaaaatacgttttgattttatcacaggcctcttttcattcccagagccgagcctccgaattcttagggacgac 24525603  T
Q  202 cctg 205  Q
    ||||    
T  24525602 cctg 24525599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 25010544 - 25010611
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  25010544 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattcttagggacggccctg 25010611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 47985083 - 47984885
Alignment:
Q  11 gtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatc-tttnnnnnnntataaa 108  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||  ||| ||||||||||||||||| |||||| ||||| || |||       ||||||    
T  47985083 gtgttaggtgggggttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaaatataaa 47984984  T
Q  109 tagaacattgctctttnnnnnnnnttata--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||| |||          | |  ||||||||||||||||||| |||||||||| |||||||||||||  |||||||| || ||||||||||    
T  47984983 tagaacattgcttttttaaaaaaaaaacacgttttgattttatcactggcatcttttcattcccagagccgagccaacgaattcttagggacggccctg 47984885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 60 - 205
Target Start/End: Original strand, 26254032 - 26254178
Alignment:
Q  60 tgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctttnnnnnnnnt-tatattttgattttatcactggcct 158  Q
    ||||||||||||||||| ||||||||||||||||||       ||||||||||||||||||||||          ||| ||||||||||||||||| |||    
T  26254032 tgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaatatgttttgattttatcactgacct 26254131  T
Q  159 cttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||| ||| ||||||||||||||||||| || ||| ||||||    
T  26254132 cttttcattcccaaagccgagcctccgaattctcagggacagccctg 26254178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 205
Target Start/End: Original strand, 28749715 - 28749895
Alignment:
Q  27 cctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctttn 125  Q
    |||||||||||||||||| ||||||||  |||  ||||||||||||||||| ||||||||||||||||||       ||||||||||| ||||||||||     
T  28749715 cctcatgtatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttcaaaaatataaatagaatattgctctttt 28749813  T
Q  126 nnnnnnnttatat--tttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
             ||||  ||||||||||||| ||| ||||||||||| ||||||||||||||||||||| | || ||||||||||    
T  28749814 gaaaaaaaaatatgttttgattttatcattggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 28749895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 203
Target Start/End: Original strand, 8239670 - 8239869
Alignment:
Q  7 tttggtgttaggtgg--ggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnnt 103  Q
    |||||||||| ||||  || |||||||| ||||||||| ||||||||||  | || |||||| |||||||||| ||| || ||||||| |||       |    
T  8239670 tttggtgttaagtggaggggttcctcatatatacggtaatcattttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaat 8239769  T
Q  104 ataaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    |||||||||||||| ||||||         ||  |||| ||||||||| |||||||||||||||||||||||||||||||| |||||| || ||||||||    
T  8239770 ataaatagaacattactcttttaaaaaaaatacgttttcattttatcattggcctcttttcatttccagagccgagcctccaaattcttagggacggccc 8239869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 40357364 - 40357311
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  40357364 ttttgattttatcactgaccttttttcatttccagagccgagcctccgaattct 40357311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 25010418 - 25010465
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc 54  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25010418 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacc 25010465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 9021898 - 9021828
Alignment:
Q  26 tcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||||||||| ||||||||| | || ||||||||||||||||| ||| ||||||||||||||    
T  9021898 tcctcatgtatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgtatttatcttt 9021828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 2611361 - 2611290
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccctgga-tgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||| || || ||||||||| | |  ||||||||||||||||||||||||||||||||||||    
T  2611361 ttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttt 2611290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 6765771 - 6765709
Alignment:
Q  34 tatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||| ||||||||| | |||||||| || |||||||||||||||||||||||||||    
T  6765771 tatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttt 6765709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 36891581 - 36891645
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatt 88  Q
    |||||||||||||||||||| |||||||||  ||||||||||| |||||||| |||| |||||||    
T  36891581 ttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtatt 36891645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 33162402 - 33162338
Alignment:
Q  60 tgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctcttt 124  Q
    ||||||||||||||||| ||||||||||||||||||       |||||||||| |||||||||||    
T  33162402 tgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagagcattgctcttt 33162338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 23859077 - 23859147
Alignment:
Q  26 tcctcatgtatacggtagtcattttca-ccctggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||||||||| ||||||| |  ||| |||| ||||||||||||  || ||||||||||||||    
T  23859077 tcctcatgtatacggtagtaattttcatctttgggtgtatcgcatatatacggtacattgtatttatcttt 23859147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 10955605 - 10955657
Alignment:
Q  139 tttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    |||||||| ||||||| ||||| |||||| || |||| |||||||||||||||    
T  10955605 tttgatttaatcactgacctctattcattccccgagctgagcctccgaattct 10955657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 95
Target Start/End: Original strand, 38971299 - 38971327
Alignment:
Q  67 catatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||||||||||||    
T  38971299 catatatacgacaccttgtatttatcttt 38971327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 3e-55; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 38209708 - 38209522
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  38209708 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 38209609  T
Q  106 aaatagaacattgctcttt-nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    |||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38209608 aaatagaacattgctctttaaaaaaaaattatattttgattttatcactggcctcttttcatttccagagccgagcctccaaattct 38209522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 47128977 - 47129172
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  47128977 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 47129076  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggc 201  Q
    ||||||||||||| |||||         || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  47129077 aaatagaacattgttcttttaaaaaaaatacattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggc 47129172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 7 - 206
Target Start/End: Original strand, 34027569 - 34027769
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||       |||    
T  34027569 tttggtgttaggtgggggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 34027668  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||||||| |||         ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  34027669 aaatagaacattgctttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 34027768  T
Q  206 g 206  Q
    |    
T  34027769 g 34027769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 34768691 - 34768484
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |||||| |||||||||||       |||    
T  34768691 tttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 34768592  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| || |||| |||||    
T  34768591 aaatagaacattgctcttttaaaaaaaatatgttttgattttatcactagcctcttttcattcccaaagccgagcctccgaattctcagggacgaccctg 34768492  T
Q  206 gtgcttac 213  Q
    ||| ||||    
T  34768491 gtggttac 34768484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 54780771 - 54780968
Alignment:
Q  11 gtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaat 109  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||       |||||||    
T  54780771 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 54780870  T
Q  110 agaacattgctctttnnnnnnnnttata--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||          |||  |||||||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||    
T  54780871 agaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccaagcctccgaattctcagggacggccctg 54780968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 14 - 208
Target Start/End: Complemental strand, 2790851 - 2790656
Alignment:
Q  14 ttaggtggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaataga 112  Q
    |||||||||| |||||||||||||||||||||||||||||| | || |||||||||||||||||  ||||| |||||||||||       ||||||||||    
T  2790851 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaataga 2790752  T
Q  113 acattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctggtg 208  Q
    |||||| |||||          || |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  2790751 acattgttcttttaaaaaaaaaatgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagagacggccctggtg 2790656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 43455645 - 43455452
Alignment:
Q  10 ggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaa 108  Q
    |||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||| |||||||||||       ||||||    
T  43455645 ggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaa 43455546  T
Q  109 tagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    ||||||||||||||||         ||  ||||||||||||||||| |||||||||||| |||||| |||||||||||||||| ||||| ||||    
T  43455545 tagaacattgctcttttaaaaataatacgttttgattttatcactgacctcttttcattcccagagtcgagcctccgaattcttagagatggcc 43455452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 10978890 - 10979092
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcac-cctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||       |||    
T  10978890 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 10978989  T
Q  106 aaatagaacattgctcttt---nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    |||||||||||||||||||            ||  ||||||||||||||||  |||||||||||| |||||||  | |||||||||||| ||||||||||    
T  10978990 aaatagaacattgctcttttaaaaaaaaaaatacgttttgattttatcactaacctcttttcattcccagagctaaacctccgaattctcagagacggcc 10979089  T
Q  203 ctg 205  Q
    |||    
T  10979090 ctg 10979092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 16845011 - 16845210
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatc-tttnnnnnnnta 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||  ||||||||||||||||| |||||||| |||       ||    
T  16845011 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcaccgttgggtgtactacatatatacgacaccttatatttatcttttaaaaaaata 16845110  T
Q  105 taaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||||||||||||         ||  |||||||||||||||||| || |||||||||||||||||||||||||||||||| || |||||||||    
T  16845111 taaatagaacattgctcttttaaaaaaaatacgttttgattttatcactgg-cttttttcatttccagagccgagcctccgaattcttagggacggccct 16845209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 32915375 - 32915575
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||| ||||||| ||| |||| |||||| |||||||||| ||||||||||||||||||       |||    
T  32915375 tttggtgttaggtgggggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatat 32915474  T
Q  106 aaatagaacattgctctttnnnnnnnntta-tattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||| |||||||          |   |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  32915475 aaatagaacatcgctcttttaaaaaaaaaaccgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 32915574  T
Q  205 g 205  Q
    |    
T  32915575 g 32915575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 32128574 - 32128774
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||       |||    
T  32128574 tttggtgttaggtgggggtttcttatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 32128673  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||||||||||| |||         ||  ||||||||||||||||| ||| |||||||| |||||||||||||||| |||||| || |||||||||    
T  32128674 aaatagaacattgctcttttaaaaaaaaatacgttttgattttatcactgaccttttttcattcccagagccgagcctccaaattcttagggacggccct 32128773  T
Q  205 g 205  Q
    |    
T  32128774 g 32128774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 1105522 - 1105707
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||| || | |||||||||||||||||| |||||||||||||||||       |||    
T  1105522 tttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatcttttaaaaaatat 1105621  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    |||||||||||  ||||||         ||  ||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  1105622 aaatagaacatcactcttttaaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 1105707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 19498494 - 19498691
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||  ||| ||||||||  ||||||| |||||| |||||||||||       |||    
T  19498494 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttggctgtaccgc--atatacggcaccttatatttatcttttaaaaaatat 19498591  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||  |||||||||||||| |||||| |||||||| | ||||||||||||||||||||| || ||||||||||    
T  19498592 aaatagaacattgctcttttaaacaaaatacgttttgattttatcattggcctgttttcattcctagagccgagcctccgaattcttagtgacggccctg 19498691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 37514649 - 37514848
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||||||||||||||       |||    
T  37514649 tttggtgttaggtggggattcttcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 37514748  T
Q  106 aaatagaacattgctctttnnnnnnnnttata--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    ||||||||||| |||||||          |||  |||||||||||||||||||||||||||||| ||   || |||||||| |||||| || ||||||||    
T  37514749 aaatagaacatcgctctttaaaaaaaaaaatacgttttgattttatcactggcctcttttcattccc--cgctgagcctccaaattctcagggacggccc 37514846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 48209230 - 48209436
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcac-cctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||  |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  48209230 tttggtgttaggtgggggtttctcatgtatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 48209329  T
Q  106 aaatagaacattgctctttnnnnnnnnttata--ttttgat-----tttatcactggcctcttttcatttccagagccgagcctccgaattctaagagac 198  Q
    |||||||||||||||||||          |||  |||||||     ||||||||||| ||||||||| | ||||||||||||||||||||||| || |||    
T  48209330 aaatagaacattgctcttttaaaaaaaaaatacgttttgattttaatttatcactggtctcttttcactcccagagccgagcctccgaattctcagggac 48209429  T
Q  199 ggccctg 205  Q
    |||||||    
T  48209430 ggccctg 48209436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 10428322 - 10428130
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc---------ctggatgtaccgcatatatacgacaccttgtatttatctttnn 97  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||          |||| ||||||||||||||||| ||||||||||||||||||      
T  10428322 tttggtgttaggtggaggttcctcatgtatacggtagtcattttcacaatttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta 10428223  T
Q  98 nnnnntataaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
         |||||||||||||||||| |||        | | |||||||||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  10428222 aaaaatataaatagaacattgctttttaaaaaaaataa-attttgattttagcactgacctcttttcattcccagagccgagcctccgaattct 10428130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 37777340 - 37777156
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||| || || ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||| |||||||||||       |||    
T  37777340 tttggtgttagttgagggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 37777241  T
Q  106 aaatagaacattgc-tctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaatt 189  Q
    |||||||||||| | | |||         ||  ||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  37777240 aaatagaacattactttttttttaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatt 37777156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 54083359 - 54083160
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttca-ccctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| | |  ||| ||||||||||||||||| |||||| |||||||||||       |||    
T  54083359 tttggtgttaggtaggggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 54083260  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||| ||||| | |||         ||  ||||||||||||||||| ||||||||||||  |||||||||||||||||||| | || ||||||||||    
T  54083259 aaatagatcattgttttttttaaaaaaatacgttttgattttatcactgacctcttttcattctcagagccgagcctccgaatttttagggacggccctg 54083160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 55 - 205
Target Start/End: Original strand, 17679439 - 17679589
Alignment:
Q  55 ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctttnnnnnnnnttatattttgattttatcactg 154  Q
    |||| ||||||||||||||||| ||||||||||||||||||       ||||||||||| ||||||||||         ||  |||||||||||||||||    
T  17679439 ctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatattgctcttttaaaaaaaatacgttttgattttatcactg 17679538  T
Q  155 gcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    | ||||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  17679539 gtctcttttcattcccagaaccgagcctccgaattctcagagacggccctg 17679589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 40089506 - 40089595
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||||    
T  40089506 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttt 40089595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 5128959 - 5128758
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||| |||| || || ||||||||||| ||||||||||||||||||       |||    
T  5128959 tttggtgttaggtggaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaatat 5128860  T
Q  106 aaatagaacattgctctt-tnnnnnnnnttatatttt-gattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    |||||||| || |||||| |          |  |||| |||||||||||||||||||||||||| |||||||||||||||  |||||| || ||||||||    
T  5128859 aaatagaatatcgctcttctaaaaaaaaaaacgttttagattttatcactggcctcttttcattcccagagccgagcctctaaattctcagggacggccc 5128760  T
Q  204 tg 205  Q
    ||    
T  5128759 tg 5128758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 35465097 - 35465281
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcac-cctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||   | | ||||||||||||||||| |||||| ||||||||||        |||    
T  35465097 tttggtgttaggtggggattcctcatgtatacggtagttattttcacttttaggtgtaccgcatatatacg-caccttttatttatcttgtaaaaaatat 35465195  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    ||||| ||||||| |||||         ||| ||||||||||||||||| |||||||||||| |||||  ||||||||||||||||    
T  35465196 aaatataacattgttcttttaaaaaaaatatgttttgattttatcactgacctcttttcattcccagaatcgagcctccgaattct 35465281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 55255259 - 55255447
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||             || ||||||||||||||||||       |||    
T  55255259 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgg------------cggcaccttgtatttatcttttaaaaaatat 55255346  T
Q  106 aaatagaacattgctctttnnnnnnnn-ttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||| ||||||||||||||         |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  55255347 aaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccct 55255446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 13460197 - 13460286
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcac-cctggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||  |||| | ||||||||||||||||||||||||||||||||||    
T  13460197 tttggtgttaggtgggggttccttatgtatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgtatttatcttt 13460286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 35779442 - 35779259
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||| |||||||||  | |||||||||||||||||| ||||||||||| | || ||||||||||||||||||||||||||||||||||||       |||    
T  35779442 tttgatgttaggtgaaggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 35779343  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
     ||||||||||||||||||         ||  |||||||||||||||| ||||||||||||| |  ||| ||| ||||||||||||    
T  35779342 -aatagaacattgctctttaaaaaaaa-tacgttttgattttatcactagcctcttttcattcctcgagtcgaacctccgaattct 35779259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 16882512 - 16882313
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcaccctg-gatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||||||||||||| || |||| |||  |||||||||||||||||||| |  | ||||||| ||||| ||| |||||| |||||||||||       |||    
T  16882512 tttggtgttaggtgagggttccccatacatacggtagtcattttcaccttttggtgtaccgtatatacacggcaccttatatttatcttttaaaaagtat 16882413  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||||| | |||         ||  ||||||||||||||||| | |||||||||| | ||||||||||||||||||||| || ||||||||||    
T  16882412 aaatagaacattgttttttttaaaaaaatacgttttgattttatcactgacttcttttcattcctagagccgagcctccgaattcttagggacggccctg 16882313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 23509915 - 23509846
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatac 75  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||| || | ||||||||||||||||    
T  23509915 tttggtgttaggtgggggttcctcatgtctacggtagtcattttcacctctaggtgtaccgcatatatac 23509846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 23508495 - 23508443
Alignment:
Q  137 attttgattttatcactggcctcttttcatttccagagccgagcctccgaatt 189  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  23508495 attttgattttatcactggcctcttttcattcccaaagccgagcctccgaatt 23508443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 24969427 - 24969474
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc 54  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24969427 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacc 24969474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 24969719 - 24969786
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||| |||||||||| ||||||||||||| |||||| |||||||||||||||| || ||||||||||    
T  24969719 ttttgtttttatcactagcctcttttcattcccagagtcgagcctccgaattcttagggacggccctg 24969786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 38352372 - 38352197
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||  ||| ||||||||          |||||| |||||||||||       |||    
T  38352372 tttggtgttaggtgggggttcctcatgtacacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 38352283  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    ||||||| |||| || |||         ||  |||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  38352282 aaatagatcattactttttaaaaaaaaatacgttttgattttatcactgatctcttttcattcccagagccgagcctccgaattct 38352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 189
Target Start/End: Original strand, 51964736 - 51964884
Alignment:
Q  45 cattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnn---tataaatagaacattgctctttnnnnnnnnttatattt 140  Q
    |||||||||| |||| |||| |||||||||||| ||||||||||||||||||          ||||||||||||||||||||||         ||  |||    
T  51964736 cattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaaaaatataaatagaacattgctcttttaaaaaaaatacgttt 51964835  T
Q  141 tgattttatcactggcctcttttcatttccagagccgagcctccgaatt 189  Q
    |||||||||||  |||||||||||||| ||||||||||| |||||||||    
T  51964836 tgattttatcatcggcctcttttcattcccagagccgagtctccgaatt 51964884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 16922312 - 16922244
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctgg 206  Q
    |||||||||||||||||| ||||||||||| ||| || ||||||||| |||||| || |||||||||||    
T  16922312 ttttgattttatcactggtctcttttcattcccaaagtcgagcctccaaattctcagggacggccctgg 16922244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 4167990 - 4167919
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||| |||||| ||||||||| | || |||| |||||||||||| ||||||||||||||||||    
T  4167990 ttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttt 4167919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 37745009 - 37744938
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||| |||||||||||| ||||||||| | ||||||| ||||||||| ||||||||| |||||||||||    
T  37745009 ttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttt 37744938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 40089647 - 40089714
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||||||||| | |||||||||| | ||||||||||||||||||||| || |||| |||||    
T  40089647 ttttgattttatcactgacttcttttcattccaagagccgagcctccgaattcttagggacgaccctg 40089714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 36178677 - 36178751
Alignment:
Q  22 ggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||| ||||||||| |||||| ||||||||  | || |||| |||||||||||||||||||||||||||||||    
T  36178677 ggattcttcatgtataaggtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttt 36178751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 2135388 - 2135349
Alignment:
Q  56 tggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  2135388 tggatgtatcgcatatatacgacaccttgtatttatcttt 2135349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 51691978 - 51691914
Alignment:
Q  60 tgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctcttt 124  Q
    ||||||||||||||||| ||||||||||||||||||       | ||||||||||||||||||||    
T  51691978 tgtaccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgctcttt 51691914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 52468294 - 52468365
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||| |||||||||| ||||||||| | |||||||   |||||||||| ||||||||||||||||||    
T  52468294 ttcctcatgcatacggtagtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttt 52468365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 9578733 - 9578663
Alignment:
Q  55 ctggatgtaccgcatatatacgac-accttgtatttatctttnnnnnnntataaatagaacattgctcttt 124  Q
    |||||||||||||||||||| | | |||||||||||||||||       ||||||||||||||||||||||    
T  9578733 ctggatgtaccgcatatatatggctaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 9578663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 9578635 - 9578575
Alignment:
Q  145 tttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||| ||||||||||| | |||||| |||||||||||||||| |  ||||||||||    
T  9578635 tttatcacttgcctcttttcactcccagagtcgagcctccgaattctcaaggacggccctg 9578575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 36118554 - 36118486
Alignment:
Q  28 ctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||||||| |||||||   | || |||| | |||||||||||||||||||||||||||||    
T  36118554 ctcatgtatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttt 36118486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 2975409 - 2975358
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaatt 189  Q
    |||||||||||||| || ||||||||||||| ||||||||||| | ||||||    
T  2975409 ttttgattttatcattgacctcttttcattttcagagccgagcattcgaatt 2975358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 40217272 - 40217311
Alignment:
Q  56 tggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  40217272 tggatgtatcgcatatatacgacaccttatatttatcttt 40217311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 16922386 - 16922328
Alignment:
Q  66 gcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctcttt 124  Q
    ||||||||||||||| || |||||||||||       ||||||||||||||||||||||    
T  16922386 gcatatatacgacactttatatttatcttttaaaaaatataaatagaacattgctcttt 16922328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 7e-53; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 34756481 - 34756295
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  34756481 tttgttgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 34756382  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    |||||||||||||||| |||        |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34756381 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 34756295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 7 - 208
Target Start/End: Complemental strand, 15480204 - 15480003
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||       |||    
T  15480204 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatcttttaaaaaatat 15480105  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||| | |||||         ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  15480104 aaatagaacatcggtctttaaaaaaaa-tatgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 15480006  T
Q  206 gtg 208  Q
    |||    
T  15480005 gtg 15480003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 16592189 - 16591990
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||       |||    
T  16592189 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatcttttagaaaatat 16592090  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||| |||||||||||||| |||||||||||||||  ||||||||||||||| |||||| |  ||||||||||    
T  16592089 aaatagaacattgctcttttaaaaaaaatatgttttgattttatcattggcctcttttcattctcagagccgagcctccaaattctcaaggacggccctg 16591990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 38869478 - 38869279
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||       |||    
T  38869478 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 38869379  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||  |||||||||||| |||| |||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  38869378 aaatagaacattgctcttttaaaaaaaatacgttttgattttataactgacctcttttcattcccagagccgagcctccgaattcttagggacggccctg 38869279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 16198909 - 16198707
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||||||| |||||||||||       |||    
T  16198909 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaatat 16198810  T
Q  106 aaatagaacattgctcttt-nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||||||| |||          ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || ||||||    
T  16198809 aaatagaacattgctttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggaaggccct 16198710  T
Q  205 ggt 207  Q
    |||    
T  16198709 ggt 16198707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 27078996 - 27079197
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||  | | ||||||||||||||||| ||||||||||||||||||       |||    
T  27078996 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 27079095  T
Q  106 aaatagaacattgctctttnnnnnnnnttata--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccc 203  Q
    |||||||||||||||||||          |||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||| || ||||||||    
T  27079096 aaatagaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcagggacggccc 27079195  T
Q  204 tg 205  Q
    ||    
T  27079196 tg 27079197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 36187994 - 36187795
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||| | || ||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| |||       |||    
T  36187994 tttggtgttaggtggaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatat 36187895  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||| |||||||          |  ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  36187894 aaatagaacatcgctcttttaaaaaaaaaacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 36187795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 7 - 200
Target Start/End: Original strand, 2274875 - 2275070
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||||||||||       |||    
T  2274875 tttggtgttaggtgggggttcctcgtgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatcttttaaaaaatat 2274974  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacgg 200  Q
    ||||||||||| |||| |||         ||  |||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||    
T  2274975 aaatagaacatcgctcttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagaaccgagcctccgaattctcagggacgg 2275070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 7 - 206
Target Start/End: Original strand, 19523184 - 19523385
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  19523184 tttggtgttaggtgggggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 19523283  T
Q  106 aaatagaacattgctcttt-nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||  |||||||           |  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| || |||||| ||    
T  19523284 aaatagaacaccgctctttaaaaaaaaaacacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattctcagggacggctct 19523383  T
Q  205 gg 206  Q
    ||    
T  19523384 gg 19523385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 9364276 - 9364462
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||| |||||||||||       |||    
T  9364276 tttgatgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9364375  T
Q  106 aaatagaacattgctctttnnnnnnnnttata--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    ||||||||||||||| |||          |||  |||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  9364376 aaatagaacattgct-tttaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagctgagcctccgaattct 9364462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 27 - 206
Target Start/End: Complemental strand, 31194706 - 31194527
Alignment:
Q  27 cctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctttn 125  Q
    |||||||||||||||||| ||||||||| |||| | ||||||||||||||| ||||||||||||||||||       ||||||||||||||||||||||     
T  31194706 cctcatgtatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 31194608  T
Q  126 nnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctgg 206  Q
            ||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||| | || |||||||||||    
T  31194607 aaaagaaatacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattttcagggacggccctgg 31194527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 30854314 - 30854432
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||| |||  ||||||||||||||||| ||||||||||||||||||       |||    
T  30854314 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 30854413  T
Q  106 aaatagaacattgctcttt 124  Q
    |||||||||||||||||||    
T  30854414 aaatagaacattgctcttt 30854432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 16799442 - 16799240
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||||||||| |||||| |||||||||||||||||| |||||||||||  ||| ||||||||||||||||| |||||| ||||||| |||       |||    
T  16799442 tttggtgttatgtgggggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaatat 16799343  T
Q  106 aaatagaaca-ttgctctttnnnnnnnnttata--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    |||||||||| || ||||||          |||  ||||||||||||||||| | |||||||||| ||||||||||||||||||||||| || |||||||    
T  16799342 aaatagaacatttactcttttaaaaaaaaaatacgttttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttagggacggcc 16799243  T
Q  203 ctg 205  Q
    |||    
T  16799242 ctg 16799240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 205
Target Start/End: Complemental strand, 22986652 - 22986473
Alignment:
Q  28 ctcatgtatacggtagtcattttcaccc-tggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctc-tttn 125  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||||||| |||||||| |||||       ||| ||||||||||||||| |||     
T  22986652 ctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtcttttaaaaaatattaatagaacattgctctttta 22986553  T
Q  126 nnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
           |||  ||||||||||||||||||||||||||||||  |||||| ||||||||||||||| |  ||||||||||    
T  22986552 aaaaaaattacgttttgattttatcactggcctcttttcattctcagagctgagcctccgaattctcacggacggccctg 22986473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 28822457 - 28822339
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||| |||||||||||       |||    
T  28822457 tttggtgttaggtgggggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 28822358  T
Q  106 aaatagaacattgctcttt 124  Q
    |||||||||||||||||||    
T  28822357 aaatagaacattgctcttt 28822339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 40389647 - 40389467
Alignment:
Q  11 gtgttaggtggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaat 109  Q
    ||||||||||||| ||||||||  |||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||       |||||||    
T  40389647 gtgttaggtgggggttcctcataaatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaat 40389548  T
Q  110 agaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    ||||||||||| ||           | |  ||||||||||||||| | |||||||||| |||||||||||||||||||||||    
T  40389547 agaacattgct-ttaaaaaaaaaaaaaaaattgattttatcactgacatcttttcattcccagagccgagcctccgaattct 40389467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 27924067 - 27924267
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||||||||||| |||  |||||||||||||||||||||||||| |||  ||||||||||||||||||||| |||||| |||||||||||       |||    
T  27924067 tttggtgttaggcgggcgttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 27924166  T
Q  106 aaatagaacattgc-tctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||  |||||| | |||         ||  ||||||||||||||||||||||||||||||  ||||| |||||| ||||||||| ||| ||||||||    
T  27924167 aaataggtcattgcttttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagtcgagcccccgaattcttagaaacggccct 27924266  T
Q  205 g 205  Q
    |    
T  27924267 g 27924267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 7670909 - 7671118
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatc-tttnnnnnnnta 104  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  ||| ||||||| | ||||||| |||||| |||||||| |||       ||    
T  7670909 tttggtgttaggtggggatacctcatgtatacggtagtcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatcttttaaaaaaata 7671008  T
Q  105 taaatagaacattgctcttt---------nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaaga 195  Q
    |||||||||||||||| |||                  ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |      
T  7671009 taaatagaacattgctttttttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaag 7671108  T
Q  196 gacggccctg 205  Q
    ||||||||||    
T  7671109 gacggccctg 7671118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 23284164 - 23284022
Alignment:
Q  20 ggggattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattg 118  Q
    |||| |||||||||||||||||||||||||||| | | || |||||||||||||||||||||||||||||||   ||       ||||||||||||||||    
T  23284164 gggggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattg 23284065  T
Q  119 ctctttnnnnnnnnttatattttgattttatcactggcctctt 161  Q
    ||||||         ||  ||||||||||||||||||||||||    
T  23284064 ctcttttaaaaaaaatacgttttgattttatcactggcctctt 23284022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 31881528 - 31881431
Alignment:
Q  27 cctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctcttt 124  Q
    |||||||||||||||||| ||||||| | |||||||| ||||||||||||| |||| |||||||||||||       ||||||||||||||||||||||    
T  31881528 cctcatgtatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgctcttt 31881431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 36868975 - 36868902
Alignment:
Q  23 gattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||||| ||||||||  | || |||||| |||||||||||||||||||||||||||||    
T  36868975 gattcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttt 36868902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 2530994 - 2530923
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||| ||||| ||||||||| | |||||||||| ||||||||||||| ||||||||||||||    
T  2530994 ttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttt 2530923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 7338038 - 7338102
Alignment:
Q  60 tgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctcttt 124  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  7338038 tgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 7338102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 14318482 - 14318411
Alignment:
Q  25 ttcctcatgtatacggtagtcattttca-ccctggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||| |||||||    |||||||| | |||||||||||||||||||||||||||||    
T  14318482 ttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttt 14318411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 26719045 - 26718975
Alignment:
Q  26 tcctcatgtatacggtagtcattttcaccctgga-tgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||| ||||||| ||||||||| | || |||| |||||||||||||||| ||||||||||||||    
T  26719045 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttt 26718975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 26988789 - 26988719
Alignment:
Q  26 tcctcatgtatacggtagtcattttcaccctgga-tgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||| ||||||| ||||||||| | || |||| |||||||||||||||| ||||||||||||||    
T  26988789 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttt 26988719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 28822319 - 28822253
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||||||||  |||||||||||| ||| |||||| |||||||||||| || |||||||||    
T  28822319 ttttgattttatcactaacctcttttcattcccaaagccgaacctccgaattcttagggacggccct 28822253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 23284010 - 23283941
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctggt 207  Q
    |||||||||||||||||||||||||||||| | | | | ||||||| ||||||| || ||||||||||||    
T  23284010 ttttgattttatcactggcctcttttcattcctaaaactgagcctctgaattctcagggacggccctggt 23283941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 10543682 - 10543747
Alignment:
Q  31 atgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||| ||||||||| | ||||||| |||||||||||  |||||| |||||||||||    
T  10543682 atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttt 10543747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 2412091 - 2412158
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttat 91  Q
    |||||||||||||| ||||| ||||||||  | ||||| | |||||||||||||||| ||||||||||    
T  2412091 ttcctcatgtatacagtagtgattttcacatttggatgcatcgcatatatacgacactttgtatttat 2412158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 7338117 - 7338172
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaa 193  Q
    |||||||||||||  || |||||||||||| | |||||||||||||| ||||||||    
T  7338117 ttttgattttatccttgacctcttttcattcctagagccgagcctccaaattctaa 7338172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 15639678 - 15639717
Alignment:
Q  56 tggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  15639678 tggatgtatcgcatatatacgtcaccttgtatttatcttt 15639717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 24395742 - 24395813
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||| |||||||| || ||||||||| | |||||||  | |||||||| |||||||||||||||||||    
T  24395742 ttcctcatctatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttt 24395813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 31881415 - 31881348
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||| |||| || ||||||||| |||||||||||||||  |||| | || ||||||||||    
T  31881415 ttttgattttattactgaccacttttcattcccagagccgagcctctaaattttcagggacggccctg 31881348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 10407462 - 10407535
Alignment:
Q  23 gattcctcatgtatacggtagtcattttcac-cctggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||| |||||||||| ||||||||   | |||||||  ||||| ||||||||||||| |||||||||    
T  10407462 gattcctcatgcatacggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatcttt 10407535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 29143462 - 29143434
Alignment:
Q  163 tcatttccagagccgagcctccgaattct 191  Q
    |||||||||||||||||||||||||||||    
T  29143462 tcatttccagagccgagcctccgaattct 29143434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 30854447 - 30854511
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    |||| |||||||| ||| ||| |||||||| |||||||||||||||| |||| | || |||||||    
T  30854447 ttttaattttatcgctgaccttttttcattcccagagccgagcctccaaattatcagggacggcc 30854511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 40794309 - 40794257
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattc 190  Q
    |||| ||||||| ||  ||||||||||| || |||||||||||||||||||||    
T  40794309 tttttattttattacgagcctcttttcacttacagagccgagcctccgaattc 40794257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 2952339 - 2952137
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttca-ccctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||||||||||||||||| ||| ||||||||||||||       |||    
T  2952339 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatat 2952240  T
Q  106 aaatagaacattgctcttt---nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    |||||||||||||||||||           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  2952239 aaatagaacattgctctttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 2952140  T
Q  203 ctg 205  Q
    |||    
T  2952139 ctg 2952137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 7 - 202
Target Start/End: Original strand, 30883314 - 30883512
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||       |||    
T  30883314 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatat 30883413  T
Q  106 aaatagaacattgctcttt--nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    |||||||||||||||||||          |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||    
T  30883414 aaatagaacattgctcttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctctgaattctcagggacggcc 30883512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 45475802 - 45476001
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||       |||    
T  45475802 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 45475901  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||  |||||||||||||||||||||||||||||| || |||||||||||||||||||| || || |||||||    
T  45475902 aaatagaacattgctcttttaaaaaaaatacgttttgattttatcactggcctcttttcattccccgagccgagcctccgaattctcagggatggccctg 45476001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 13534804 - 13534604
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| || |||||||||||||||       |||    
T  13534804 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatat 13534706  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||| | || ||||||| ||    
T  13534705 aaatagaacattgctcttttaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggccgtg 13534606  T
Q  206 gt 207  Q
    ||    
T  13534605 gt 13534604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 13624344 - 13624144
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| || |||||||||||||||       |||    
T  13624344 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatat 13624246  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||| | || ||||||| ||    
T  13624245 aaatagaacattgctcttttaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggccgtg 13624146  T
Q  206 gt 207  Q
    ||    
T  13624145 gt 13624144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 3048635 - 3048435
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||||||||||||| || |||||| ||||||||||||||||||||| | || | ||||||||||||||||| ||||||||||||||||||       |||    
T  3048635 tttggtgttaggtgagggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3048536  T
Q  106 aaatagaacattgctctttnnnnnnnn-ttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||| | ||||||||||         |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3048535 aaatagtatattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagagacggccct 3048436  T
Q  205 g 205  Q
    |    
T  3048435 g 3048435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 23606747 - 23606548
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||  ||| ||||||||||||||||| |||||| |||||||||||       |||    
T  23606747 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 23606648  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||||||||||||         ||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  23606647 aaatagaacattgctcttttaaaaaaaatacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagggacggccctg 23606548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 5860862 - 5860663
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||| ||| || |||||||||| |||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||       |||    
T  5860862 tttggtgttaggttggggtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5860763  T
Q  106 aaatagaacattgctcttt---nnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggcc 202  Q
    |||||||||||||||||||           |||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  5860762 aaatagaacattgctctttaaaaataaatattatgttttgattttatcattgacctcttttcatttccagagccgagcctccaaattctcagagatggcc 5860663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 23798379 - 23798179
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcac-cctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||   ||| ||||||||||||||||| |||||| |||||||||||       |||    
T  23798379 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 23798280  T
Q  106 aaatagaacattgctctttnnnnnnnnt-tatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    |||||||||||||||||||        | ||  |||||||||||||| || ||||||||| || ||||||||||||||||||||||| || |||||||||    
T  23798279 aaatagaacattgctctttaaaaaaaatatacgttttgattttatcattgacctcttttcgttcccagagccgagcctccgaattcttagggacggccct 23798180  T
Q  205 g 205  Q
    |    
T  23798179 g 23798179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 10917376 - 10917561
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||  ||| ||||||||||||||||| |||||| |||||||||||       |||    
T  10917376 tttggtgttaggtgggggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 10917475  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 191  Q
    ||||||| ||||| | |||         ||  ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  10917476 aaatagatcattgttttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattct 10917561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 37430276 - 37430076
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    |||||||||| ||| || |||||||||||||||||||||||||| ||| || | |||| |||||||||||| ||||||||||||||||||       |||    
T  37430276 tttggtgttacgtgagggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaaaatat 37430177  T
Q  106 aaatagaacattgctctttnnnnnnnnttata-ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||| |||||||          |   |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  37430176 aaatagaacatcgctcttttaaaaaaaaaaacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 37430077  T
Q  205 g 205  Q
    |    
T  37430076 g 37430076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 42600767 - 42600967
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||| |||||||||| |||||| |||||||||||       |||    
T  42600767 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatat 42600866  T
Q  106 aaatagaacattgc-tctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||| |||||| | |||          |  ||||||||||||||||| ||||||||||||| |||||||||||||||||||||| || |||||||||    
T  42600867 aaatagatcattgcttttttaaaaaaaaaaacgttttgattttatcactgacctcttttcattttcagagccgagcctccgaattcttagggacggccct 42600966  T
Q  205 g 205  Q
    |    
T  42600967 g 42600967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 41879166 - 41879364
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||  |||||||||||||||||||||  |||||||||||||||||       |||    
T  41879166 tttggtgttaggtgggggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaatat 41879265  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    ||||||||||||| |||||         ||  |||| |||||||||||  |||||||||||| |||||||||||||| |||||||| || ||||||||||    
T  41879266 aaatagaacattgttcttttaaaaaaa-tacgttttaattttatcactaacctcttttcattcccagagccgagccttcgaattctcagggacggccctg 41879364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 20003795 - 20003727
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctgg 206  Q
    |||||||||||||||||||||||||||||| || ||||||||||||| |||||| || |||||||||||    
T  20003795 ttttgattttatcactggcctcttttcattccccgagccgagcctccaaattctcagggacggccctgg 20003727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 39332505 - 39332434
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||| ||||||||| | ||||||||||| |||||| ||||||||||||||||||||    
T  39332505 ttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatcttt 39332434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 5942699 - 5942770
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||| ||||||||| | || ||||||||| |||||||||| |||||||||||||||    
T  5942699 ttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttt 5942770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 11290190 - 11290258
Alignment:
Q  28 ctcatgtatacggtagtcattttcaccctgga-tgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||||||| ||||||||| | || |||||  |||||||||||||||||||||||||||||    
T  11290190 ctcatgtatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttt 11290258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 41677274 - 41677203
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccctg-gatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||| ||||| ||||||||| |  |||||| ||||||||||||||| |||||||||||||||    
T  41677274 ttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttt 41677203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 5973207 - 5973046
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccc-tggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntataaatagaacattgctctt 123  Q
    |||||| ||||||||||| | ||||||| |  ||| |||||  |||||||||||||||||||||||||||||       | |||||||||||||| ||||    
T  5973207 ttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttctt 5973108  T
Q  124 tnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccg 185  Q
    |         || ||||| ||||||| || | ||||||||||||| ||||||| ||||||||    
T  5973107 ttaaaacgaatacatttttattttattacagacctcttttcatttacagagccaagcctccg 5973046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 34789959 - 34789891
Alignment:
Q  28 ctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||||||||||||| ||||||||| | || |||||  ||||||||||||| |||||||||||||||    
T  34789959 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatcttt 34789891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 7944622 - 7944555
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttat 91  Q
    |||||||||||||||||||| |||||||||  ||| |||||  |||||||||| ||||||||||||||    
T  7944622 ttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttat 7944555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 8102915 - 8102986
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccctg-gatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||| | ||||||||| |  | ||||||||||||||||  ||||||||||||||||||    
T  8102915 ttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttt 8102986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 1328 - 1527
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttca-ccctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||||||||||||||||| || |||||||||||||||       |||    
T  1328 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaatat 1427  T
Q  106 aaatagaacattgctctttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctg 205  Q
    |||||||||| ||||||||         ||  ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  1428 aaatagaacagtgctcttttaaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 1527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 106523 - 106723
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatatatacgacaccttgtatttatctttnnnnnnntat 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||       |||    
T  106523 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 106622  T
Q  106 aaatagaacattgctc-tttnnnnnnnnttatattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccct 204  Q
    ||||||||||||| || |||         ||  |||||||||||||||||||||||||||||| |||||||||||||||| |||||| || |||||||||    
T  106623 aaatagaacattgttcttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccct 106722  T
Q  205 g 205  Q
    |    
T  106723 g 106723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 206589 - 206518
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  206589 ttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttt 206518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 181904 - 181969
Alignment:
Q  7 tttggtgttaggtggggattcctcatgtatacggtagtcattttcacc-ctggatgtaccgcatat 71  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  181904 tttggtgttagatgggggttcctcatgtatacggtagtcattttcacctctggatgtaccgcatat 181969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 183177 - 183246
Alignment:
Q  138 ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctaagagacggccctggt 207  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||| ||||| | || ||||||||||||    
T  183177 ttttaattttatcactggcctcttttcattcccagagccgagcctctgaattttcagggacggccctggt 183246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 354 - 287
Alignment:
Q  29 tcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||| ||||||||  | || ||||||||||||||||||||||||||||||||||||    
T  354 tcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttt 287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 24095 - 24022
Alignment:
Q  23 gattcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||| ||| |||||||| | ||||||||  | || ||||||||||||||||||||||||||||||||||||    
T  24095 gattccttatgcatacggtaatgattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttt 24022  T

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Target: scaffold0097 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 38928 - 38999
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccctgga-tgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    |||||||| ||||||||||| ||||||||  | |  |||| |||||||||||||||||||||||||||||||    
T  38928 ttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttt 38999  T

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Target: scaffold0227 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 16033 - 16095
Alignment:
Q  28 ctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtattt 89  Q
    ||||||||||||||||| ||||||| | | |||||||||||||| |||||||| |||||||||    
T  16033 ctcatgtatacggtagtgattttcatctttggatgtaccgcatacatacgacatcttgtattt 16095  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 173610 - 173539
Alignment:
Q  25 ttcctcatgtatacggtagtcattttcaccct-ggatgtaccgcatatatacgacaccttgtatttatcttt 95  Q
    ||||||| |||||||||||| ||||| ||| | || |||| ||||||||||||  |||||||||||||||||    
T  173610 ttcctcacgtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatcttt 173539  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 95
Target Start/End: Complemental strand, 351391 - 351363
Alignment:
Q  67 catatatacgacaccttgtatttatcttt 95  Q
    |||||||||||||||||||||||||||||    
T  351391 catatatacgacaccttgtatttatcttt 351363  T

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