View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8723_low_20 (Length: 211)
Name: NF8723_low_20
Description: NF8723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8723_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 45702120 - 45701965
Alignment:
| Q |
25 |
ataaatagttaatttgttctttaaattatcactannnnnnnnaactgaaagaataataatttagagactaaattgaatagacaataataggatcaaatta |
124 |
Q |
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| T |
45702120 |
ataaatagttaatttgttctttaaattatcaatattttttttaactgaaagaataataatttagagac--------------aataataggatcaaatta |
45702035 |
T |
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| Q |
125 |
agtccttattcactaaagaaaccatctggcacacgatccatcataacatgtgggtgacattcgcttgatt |
194 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
45702034 |
agtccttattcactaaagaaaccatctggcacacgatccagcataacatgtgggtgacattcgcttgatt |
45701965 |
T |
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