View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8727_low_8 (Length: 396)

Name: NF8727_low_8
Description: NF8727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8727_low_8
NF8727_low_8
[»] chr8 (60 HSPs)
chr8 (74-263)||(34890168-34890357)
chr8 (74-263)||(36190749-36190938)
chr8 (75-268)||(24892810-24893006)
chr8 (74-252)||(43216341-43216519)
chr8 (74-252)||(7858516-7858694)
chr8 (100-262)||(31734093-31734255)
chr8 (74-246)||(7022397-7022569)
chr8 (74-268)||(8711848-8712038)
chr8 (74-246)||(26483526-26483698)
chr8 (94-256)||(28348595-28348756)
chr8 (74-252)||(34158284-34158463)
chr8 (88-252)||(15957919-15958085)
chr8 (74-232)||(30575828-30575987)
chr8 (100-262)||(13143742-13143904)
chr8 (93-262)||(35456038-35456206)
chr8 (74-263)||(13143939-13144144)
chr8 (83-252)||(41086389-41086558)
chr8 (74-268)||(29920262-29920456)
chr8 (83-252)||(8107620-8107789)
chr8 (74-262)||(8709780-8709966)
chr8 (84-252)||(15824641-15824803)
chr8 (74-258)||(4046887-4047072)
chr8 (88-257)||(16879400-16879569)
chr8 (88-224)||(35525603-35525737)
chr8 (151-252)||(7499714-7499816)
chr8 (74-209)||(16358106-16358240)
chr8 (149-238)||(3642039-3642127)
chr8 (137-246)||(2052830-2052937)
chr8 (74-236)||(17713227-17713389)
chr8 (140-236)||(26954452-26954548)
chr8 (74-236)||(2628158-2628320)
chr8 (83-236)||(41362310-41362463)
chr8 (74-156)||(2052947-2053029)
chr8 (114-236)||(8673385-8673507)
chr8 (83-236)||(8745587-8745740)
chr8 (74-236)||(17336746-17336908)
chr8 (74-200)||(44663786-44663909)
chr8 (118-236)||(25195085-25195202)
chr8 (143-253)||(41755913-41756022)
chr8 (74-124)||(45190700-45190750)
chr8 (74-235)||(5217397-5217557)
chr8 (75-237)||(34899928-34900090)
chr8 (104-174)||(4480841-4480911)
chr8 (74-187)||(8712577-8712690)
chr8 (140-236)||(4038941-4039037)
chr8 (167-231)||(7670749-7670813)
chr8 (78-126)||(11158675-11158723)
chr8 (140-236)||(27819663-27819759)
chr8 (74-234)||(38072169-38072329)
chr8 (179-236)||(14576244-14576301)
chr8 (140-262)||(33563571-33563698)
chr8 (1-33)||(10737934-10737966)
chr8 (140-195)||(28497198-28497253)
chr8 (74-237)||(31133023-31133186)
chr8 (76-181)||(6401679-6401784)
chr8 (78-236)||(17314834-17314992)
chr8 (74-176)||(40773397-40773499)
chr8 (161-222)||(374103-374162)
chr8 (140-237)||(16643387-16643484)
chr8 (74-134)||(7499821-7499881)
[»] chr7 (48 HSPs)
chr7 (93-271)||(20123691-20123869)
chr7 (76-263)||(25944555-25944742)
chr7 (74-252)||(18102520-18102698)
chr7 (74-246)||(14805866-14806037)
chr7 (74-246)||(15252860-15253031)
chr7 (74-246)||(45485951-45486123)
chr7 (74-246)||(46760249-46760421)
chr7 (74-252)||(6191035-6191213)
chr7 (74-246)||(25737619-25737791)
chr7 (74-246)||(35923248-35923419)
chr7 (74-268)||(4910627-4910819)
chr7 (74-246)||(19912761-19912933)
chr7 (74-256)||(47779590-47779772)
chr7 (132-268)||(9158064-9158199)
chr7 (76-262)||(14574544-14574730)
chr7 (74-252)||(22632079-22632257)
chr7 (105-252)||(47557622-47557771)
chr7 (76-262)||(15995699-15995886)
chr7 (74-204)||(12632336-12632466)
chr7 (100-261)||(2610586-2610747)
chr7 (83-252)||(44682868-44683036)
chr7 (88-258)||(11780002-11780171)
chr7 (74-235)||(16917479-16917639)
chr7 (151-261)||(4237784-4237893)
chr7 (115-221)||(31549936-31550042)
chr7 (88-235)||(48413728-48413867)
chr7 (151-261)||(27810804-27810914)
chr7 (106-251)||(35068872-35069004)
chr7 (140-236)||(39170540-39170636)
chr7 (140-235)||(24151640-24151734)
chr7 (74-236)||(38260322-38260484)
chr7 (137-206)||(4069039-4069108)
chr7 (83-261)||(19492394-19492574)
chr7 (74-235)||(29713196-29713357)
chr7 (74-235)||(37767011-37767172)
chr7 (206-252)||(12633111-12633157)
chr7 (114-236)||(31768994-31769116)
chr7 (74-236)||(35887961-35888123)
chr7 (1-46)||(20123379-20123424)
chr7 (74-237)||(33153039-33153202)
chr7 (76-237)||(48879388-48879549)
chr7 (76-236)||(3777984-3778144)
chr7 (74-237)||(35084052-35084215)
chr7 (118-237)||(21654116-21654235)
chr7 (74-235)||(22369233-22369384)
chr7 (76-237)||(40560382-40560543)
chr7 (140-176)||(10248594-10248630)
chr7 (209-237)||(41890328-41890356)
[»] chr4 (65 HSPs)
chr4 (74-252)||(20281579-20281757)
chr4 (74-268)||(39078129-39078322)
chr4 (74-263)||(4058692-4058881)
chr4 (74-263)||(29203483-29203672)
chr4 (74-246)||(47867873-47868045)
chr4 (74-246)||(2229241-2229413)
chr4 (74-268)||(20716152-20716346)
chr4 (74-252)||(26916313-26916491)
chr4 (74-268)||(10069669-10069863)
chr4 (74-252)||(14332748-14332926)
chr4 (74-252)||(41414597-41414774)
chr4 (74-263)||(5483264-5483453)
chr4 (74-252)||(28668987-28669164)
chr4 (74-263)||(55580646-55580836)
chr4 (76-252)||(56318058-56318234)
chr4 (83-258)||(35310737-35310912)
chr4 (74-258)||(17794527-17794711)
chr4 (74-224)||(7654633-7654783)
chr4 (83-224)||(16604841-16604982)
chr4 (74-238)||(24940367-24940531)
chr4 (75-263)||(42915506-42915695)
chr4 (76-268)||(52535585-52535765)
chr4 (74-253)||(1585335-1585512)
chr4 (74-268)||(48793616-48793806)
chr4 (74-246)||(8683292-8683462)
chr4 (152-268)||(35529644-35529760)
chr4 (80-262)||(32323254-32323435)
chr4 (74-260)||(19351826-19352018)
chr4 (74-252)||(50080442-50080615)
chr4 (76-159)||(16473829-16473912)
chr4 (110-261)||(50145715-50145865)
chr4 (111-235)||(5815474-5815598)
chr4 (74-252)||(12002619-12002799)
chr4 (100-261)||(31280178-31280329)
chr4 (74-236)||(5064641-5064803)
chr4 (83-236)||(46070518-46070668)
chr4 (74-182)||(21722668-21722776)
chr4 (152-252)||(25297286-25297386)
chr4 (74-252)||(14583717-14583895)
chr4 (74-234)||(32203226-32203379)
chr4 (143-236)||(5841834-5841927)
chr4 (87-236)||(47516190-47516339)
chr4 (140-236)||(8178291-8178387)
chr4 (114-202)||(17186822-17186909)
chr4 (83-231)||(17799129-17799277)
chr4 (142-236)||(23978169-23978263)
chr4 (74-236)||(28142608-28142769)
chr4 (94-196)||(32280009-32280111)
chr4 (84-235)||(40553774-40553929)
chr4 (114-236)||(37911888-37912010)
chr4 (114-175)||(29511490-29511551)
chr4 (74-236)||(53848471-53848626)
chr4 (74-236)||(32410332-32410494)
chr4 (74-236)||(8013075-8013237)
chr4 (74-236)||(28318408-28318565)
chr4 (83-127)||(7438761-7438805)
chr4 (206-258)||(21722784-21722836)
chr4 (74-237)||(30011913-30012074)
chr4 (140-236)||(49080261-49080357)
chr4 (142-237)||(40411104-40411199)
chr4 (206-252)||(32280105-32280151)
chr4 (4-33)||(13998921-13998950)
chr4 (4-33)||(22747938-22747967)
chr4 (74-127)||(38140698-38140751)
chr4 (83-123)||(31532448-31532488)
[»] chr5 (55 HSPs)
chr5 (74-263)||(20643993-20644182)
chr5 (74-246)||(43589955-43590127)
chr5 (74-252)||(42273639-42273815)
chr5 (74-246)||(6686380-6686553)
chr5 (74-263)||(20039081-20039270)
chr5 (75-262)||(34425311-34425497)
chr5 (74-252)||(37562754-37562933)
chr5 (83-261)||(38130115-38130296)
chr5 (74-252)||(11261877-11262055)
chr5 (84-252)||(37522592-37522761)
chr5 (96-268)||(8225437-8225608)
chr5 (100-252)||(32110992-32111144)
chr5 (74-268)||(25840838-25841032)
chr5 (120-262)||(38280827-38280969)
chr5 (83-268)||(19413115-19413300)
chr5 (76-261)||(43454318-43454503)
chr5 (74-268)||(4463334-4463526)
chr5 (74-263)||(9957428-9957598)
chr5 (74-268)||(39505225-39505419)
chr5 (99-268)||(5984126-5984302)
chr5 (74-259)||(17351371-17351556)
chr5 (135-252)||(32017694-32017810)
chr5 (78-236)||(12912292-12912449)
chr5 (86-268)||(41625517-41625697)
chr5 (93-263)||(42104262-42104430)
chr5 (137-262)||(104270-104403)
chr5 (74-204)||(12792779-12792899)
chr5 (140-236)||(10153987-10154083)
chr5 (74-258)||(23233383-23233579)
chr5 (114-236)||(5369064-5369186)
chr5 (74-204)||(12729878-12729997)
chr5 (83-152)||(32019911-32019980)
chr5 (138-262)||(7071218-7071342)
chr5 (172-261)||(1238507-1238596)
chr5 (160-267)||(11858295-11858402)
chr5 (74-196)||(30893243-30893365)
chr5 (200-252)||(12730099-12730151)
chr5 (119-236)||(3463853-3463970)
chr5 (76-236)||(8506443-8506597)
chr5 (115-176)||(29307221-29307282)
chr5 (88-236)||(16153353-16153500)
chr5 (74-237)||(24439575-24439738)
chr5 (209-252)||(12792929-12792972)
chr5 (74-236)||(5736233-5736395)
chr5 (83-176)||(1144493-1144586)
chr5 (114-235)||(6391876-6391997)
chr5 (115-236)||(8959646-8959767)
chr5 (145-236)||(5659584-5659676)
chr5 (76-235)||(32079512-32079670)
chr5 (104-235)||(8146730-8146860)
chr5 (76-245)||(15006289-15006458)
chr5 (161-238)||(29493592-29493669)
chr5 (118-203)||(30703640-30703725)
chr5 (192-252)||(446000-446060)
chr5 (209-237)||(17825326-17825354)
[»] chr1 (85 HSPs)
chr1 (75-268)||(6785430-6785622)
chr1 (74-263)||(15959633-15959822)
chr1 (74-268)||(6786812-6787006)
chr1 (74-268)||(33369527-33369718)
chr1 (74-252)||(32623998-32624176)
chr1 (74-268)||(45226112-45226306)
chr1 (74-252)||(2126028-2126206)
chr1 (74-252)||(39555579-39555757)
chr1 (74-246)||(24190466-24190637)
chr1 (74-268)||(28016739-28016931)
chr1 (78-252)||(42965813-42965985)
chr1 (83-252)||(12448970-12449138)
chr1 (83-268)||(47600038-47600226)
chr1 (74-261)||(13136547-13136730)
chr1 (74-251)||(40718669-40718846)
chr1 (77-262)||(7467958-7468144)
chr1 (74-252)||(32983165-32983341)
chr1 (85-262)||(39932576-39932753)
chr1 (74-268)||(3875012-3875208)
chr1 (75-262)||(47014487-47014671)
chr1 (74-253)||(28120748-28120927)
chr1 (89-246)||(35691388-35691546)
chr1 (83-263)||(46542963-46543141)
chr1 (74-268)||(33431535-33431727)
chr1 (74-252)||(43667296-43667472)
chr1 (83-268)||(1820389-1820574)
chr1 (74-263)||(3076274-3076463)
chr1 (74-258)||(24728619-24728804)
chr1 (74-260)||(11241025-11241195)
chr1 (85-252)||(3861699-3861864)
chr1 (76-252)||(46818497-46818673)
chr1 (93-259)||(37735395-37735561)
chr1 (74-246)||(44148829-44148997)
chr1 (93-251)||(2246026-2246184)
chr1 (147-268)||(50012565-50012685)
chr1 (74-263)||(1034837-1035023)
chr1 (99-235)||(43765301-43765438)
chr1 (74-196)||(52984979-52985101)
chr1 (141-258)||(6787050-6787166)
chr1 (99-252)||(25391674-25391824)
chr1 (137-258)||(50369942-50370066)
chr1 (137-252)||(16854131-16854245)
chr1 (74-221)||(32742195-32742342)
chr1 (80-252)||(47302907-47303077)
chr1 (74-230)||(7875933-7876091)
chr1 (129-258)||(23392214-23392342)
chr1 (121-245)||(10558796-10558920)
chr1 (74-196)||(30221771-30221893)
chr1 (140-236)||(5858430-5858526)
chr1 (74-236)||(45840059-45840220)
chr1 (140-236)||(5950445-5950541)
chr1 (154-234)||(47026655-47026736)
chr1 (83-224)||(298670-298812)
chr1 (140-236)||(16688142-16688238)
chr1 (74-236)||(41063747-41063910)
chr1 (75-149)||(4672924-4672998)
chr1 (74-236)||(7397712-7397874)
chr1 (74-236)||(37538815-37538977)
chr1 (88-204)||(32318566-32318683)
chr1 (76-236)||(35366198-35366358)
chr1 (162-228)||(14086966-14087030)
chr1 (190-268)||(50665237-50665315)
chr1 (78-236)||(25185300-25185459)
chr1 (140-236)||(8889756-8889845)
chr1 (74-220)||(30701378-30701524)
chr1 (74-236)||(44510212-44510374)
chr1 (74-235)||(52841438-52841599)
chr1 (140-236)||(15912204-15912300)
chr1 (137-236)||(13351686-13351785)
chr1 (74-237)||(36383929-36384092)
chr1 (74-176)||(50176588-50176690)
chr1 (163-236)||(39151242-39151315)
chr1 (206-262)||(30221721-30221777)
chr1 (74-237)||(23873823-23873986)
chr1 (161-236)||(34102053-34102127)
chr1 (213-264)||(52984870-52984921)
chr1 (151-235)||(42724101-42724185)
chr1 (192-236)||(43359696-43359740)
chr1 (214-262)||(48566156-48566203)
chr1 (226-268)||(4672873-4672915)
chr1 (74-127)||(7190771-7190824)
chr1 (4-33)||(26027682-26027711)
chr1 (162-235)||(46804612-46804685)
chr1 (88-133)||(50012687-50012732)
chr1 (140-235)||(51338956-51339052)
[»] chr2 (51 HSPs)
chr2 (74-263)||(19264078-19264268)
chr2 (74-252)||(6110191-6110371)
chr2 (76-252)||(28599142-28599318)
chr2 (74-252)||(3201316-3201494)
chr2 (74-252)||(45085247-45085425)
chr2 (74-246)||(35517119-35517291)
chr2 (74-268)||(28858283-28858480)
chr2 (74-252)||(45660355-45660536)
chr2 (74-268)||(11616998-11617192)
chr2 (75-252)||(33198624-33198801)
chr2 (74-262)||(12938222-12938410)
chr2 (74-252)||(41528246-41528425)
chr2 (74-263)||(29524033-29524222)
chr2 (74-268)||(9864710-9864903)
chr2 (83-262)||(5963181-5963359)
chr2 (74-268)||(8701576-8701770)
chr2 (74-252)||(25572036-25572213)
chr2 (74-258)||(6765925-6766110)
chr2 (74-262)||(33677463-33677651)
chr2 (120-262)||(40584436-40584578)
chr2 (100-252)||(14873952-14874105)
chr2 (85-262)||(24204532-24204709)
chr2 (74-252)||(7645219-7645400)
chr2 (74-268)||(35022871-35023066)
chr2 (74-221)||(35115795-35115943)
chr2 (83-261)||(44454972-44455148)
chr2 (74-204)||(40808712-40808841)
chr2 (74-175)||(43415468-43415569)
chr2 (83-258)||(30830597-30830772)
chr2 (74-236)||(26998323-26998485)
chr2 (74-236)||(32010108-32010270)
chr2 (132-252)||(30421232-30421352)
chr2 (76-236)||(32273677-32273841)
chr2 (167-217)||(5280592-5280642)
chr2 (140-229)||(9709526-9709615)
chr2 (161-258)||(39696878-39696975)
chr2 (206-268)||(32427963-32428025)
chr2 (140-236)||(8032726-8032823)
chr2 (83-236)||(38071002-38071154)
chr2 (88-236)||(44442137-44442286)
chr2 (105-181)||(4707482-4707558)
chr2 (130-236)||(11030978-11031077)
chr2 (74-237)||(18833902-18834065)
chr2 (74-236)||(4891630-4891793)
chr2 (88-146)||(5280536-5280595)
chr2 (114-236)||(20380129-20380251)
chr2 (206-254)||(23987141-23987189)
chr2 (83-186)||(32428029-32428133)
chr2 (140-175)||(16494984-16495019)
chr2 (74-108)||(11825351-11825385)
chr2 (152-237)||(43075751-43075836)
[»] chr3 (80 HSPs)
chr3 (74-263)||(14752160-14752349)
chr3 (74-261)||(28875391-28875578)
chr3 (74-262)||(6075065-6075253)
chr3 (74-262)||(7866435-7866623)
chr3 (74-246)||(37042369-37042541)
chr3 (74-261)||(35963137-35963324)
chr3 (74-268)||(46711610-46711803)
chr3 (74-267)||(54464848-54465040)
chr3 (74-268)||(579097-579284)
chr3 (74-251)||(50650989-50651166)
chr3 (74-252)||(36546536-36546714)
chr3 (74-252)||(36561601-36561779)
chr3 (74-252)||(47864185-47864363)
chr3 (78-246)||(11054267-11054432)
chr3 (83-246)||(23311554-23311717)
chr3 (74-246)||(30189570-30189743)
chr3 (78-252)||(37074952-37075128)
chr3 (100-252)||(6438077-6438229)
chr3 (74-252)||(29235187-29235359)
chr3 (74-262)||(41476287-41476469)
chr3 (75-262)||(19464059-19464248)
chr3 (74-252)||(53270227-53270406)
chr3 (74-250)||(8703105-8703277)
chr3 (74-250)||(9054992-9055164)
chr3 (74-268)||(2927267-2927462)
chr3 (74-252)||(50730103-50730281)
chr3 (74-252)||(50782573-50782751)
chr3 (74-262)||(26207998-26208186)
chr3 (74-262)||(20847222-20847408)
chr3 (78-261)||(26724947-26725130)
chr3 (83-252)||(32619790-32619960)
chr3 (74-193)||(23910465-23910584)
chr3 (74-204)||(31836961-31837091)
chr3 (74-187)||(9264610-9264723)
chr3 (140-238)||(34722623-34722721)
chr3 (177-261)||(33974614-33974698)
chr3 (152-262)||(6752654-6752764)
chr3 (74-236)||(8096970-8097132)
chr3 (165-263)||(46557244-46557342)
chr3 (118-246)||(3972275-3972402)
chr3 (118-246)||(3997476-3997603)
chr3 (161-263)||(38674853-38674955)
chr3 (74-252)||(47115843-47116021)
chr3 (140-229)||(16033005-16033094)
chr3 (140-236)||(34194892-34194988)
chr3 (77-236)||(22479009-22479168)
chr3 (84-236)||(30454687-30454838)
chr3 (74-182)||(33973518-33973627)
chr3 (150-235)||(47866941-47867026)
chr3 (78-236)||(7886573-7886731)
chr3 (74-236)||(10114915-10115077)
chr3 (114-236)||(46918205-46918327)
chr3 (190-252)||(48802548-48802610)
chr3 (77-198)||(3084135-3084256)
chr3 (83-236)||(22455969-22456122)
chr3 (74-236)||(38401384-38401550)
chr3 (74-196)||(8769531-8769651)
chr3 (74-236)||(10252015-10252177)
chr3 (83-236)||(47443935-47444087)
chr3 (74-236)||(10014273-10014435)
chr3 (114-236)||(21214245-21214367)
chr3 (183-252)||(9264002-9264071)
chr3 (74-171)||(25242130-25242227)
chr3 (74-189)||(8764631-8764744)
chr3 (74-236)||(2994367-2994532)
chr3 (207-252)||(23910580-23910625)
chr3 (131-236)||(48291826-48291931)
chr3 (119-268)||(41936195-41936335)
chr3 (74-171)||(46557122-46557219)
chr3 (140-182)||(54725628-54725670)
chr3 (205-238)||(34722567-34722600)
chr3 (74-119)||(47866876-47866921)
chr3 (83-166)||(17587779-17587862)
chr3 (207-258)||(31181015-31181066)
chr3 (74-196)||(30612221-30612343)
chr3 (88-197)||(36150967-36151077)
chr3 (74-127)||(27875882-27875935)
chr3 (74-187)||(31292664-31292777)
chr3 (114-174)||(6784390-6784450)
chr3 (209-237)||(51426621-51426649)
[»] chr6 (25 HSPs)
chr6 (74-246)||(21542414-21542586)
chr6 (76-246)||(11082240-11082410)
chr6 (74-246)||(35129047-35129220)
chr6 (74-268)||(7274868-7275062)
chr6 (74-246)||(34177634-34177806)
chr6 (83-246)||(3095722-3095884)
chr6 (74-261)||(17751737-17751924)
chr6 (74-258)||(12461422-12461606)
chr6 (83-252)||(30794194-30794363)
chr6 (112-252)||(31107181-31107320)
chr6 (168-258)||(9428754-9428844)
chr6 (74-236)||(4031991-4032156)
chr6 (114-236)||(4987947-4988069)
chr6 (114-236)||(16524384-16524505)
chr6 (74-258)||(14573121-14573305)
chr6 (140-236)||(3888431-3888527)
chr6 (114-232)||(16013465-16013583)
chr6 (74-170)||(5822027-5822123)
chr6 (74-141)||(9428846-9428913)
chr6 (74-237)||(21963958-21964121)
chr6 (140-182)||(5300659-5300701)
chr6 (83-237)||(17598294-17598448)
chr6 (178-254)||(3102786-3102862)
chr6 (74-175)||(15830760-15830861)
chr6 (5-33)||(17271277-17271305)
[»] scaffold0442 (1 HSPs)
scaffold0442 (78-252)||(10035-10209)
[»] scaffold0300 (1 HSPs)
scaffold0300 (74-246)||(566-738)
[»] scaffold0062 (1 HSPs)
scaffold0062 (74-262)||(44764-44952)
[»] scaffold0045 (1 HSPs)
scaffold0045 (74-252)||(77947-78125)
[»] scaffold0774 (1 HSPs)
scaffold0774 (100-250)||(3447-3597)
[»] scaffold0132 (2 HSPs)
scaffold0132 (88-268)||(986-1166)
scaffold0132 (88-268)||(8946-9126)
[»] scaffold0009 (2 HSPs)
scaffold0009 (78-258)||(157778-157958)
scaffold0009 (155-268)||(52676-52789)
[»] scaffold0018 (1 HSPs)
scaffold0018 (83-252)||(154851-155019)
[»] scaffold0111 (1 HSPs)
scaffold0111 (99-263)||(40159-40321)
[»] scaffold0012 (1 HSPs)
scaffold0012 (116-268)||(160224-160376)
[»] scaffold0565 (1 HSPs)
scaffold0565 (74-236)||(5868-6030)
[»] scaffold0005 (1 HSPs)
scaffold0005 (74-252)||(233480-233658)
[»] scaffold0330 (1 HSPs)
scaffold0330 (74-236)||(3174-3336)
[»] scaffold1786 (2 HSPs)
scaffold1786 (206-263)||(843-899)
scaffold1786 (83-196)||(893-997)
[»] scaffold0010 (1 HSPs)
scaffold0010 (74-215)||(160912-161053)


Alignment Details
Target: chr8 (Bit Score: 162; Significance: 2e-86; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 74 - 263
Target Start/End: Original strand, 34890168 - 34890357
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  34890168 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 34890267  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34890268 tggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttgg 34890357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 74 - 263
Target Start/End: Complemental strand, 36190938 - 36190749
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||    
T  36190938 tcacacttgttaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 36190839  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36190838 tggctattggttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttgg 36190749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 75 - 268
Target Start/End: Complemental strand, 24893006 - 24892810
Alignment:
Q  75 cacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtag---aaacaattttc 171  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||| ||| ||    |||||||||||    
T  24893006 cacacttattaagaaaacttaaacataagaatttagagtatagttttttgtgttttctttggaaaacgttttataggaggatataataaaaacaattttc 24892907  T
Q  172 attggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24892906 attggctattggttatggaaaaaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttgggaaag 24892810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 43216341 - 43216519
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||    
T  43216341 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 43216440  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |  |||||||||||||| ||||||||||||| | |||||| |||||||||||||||||||||||| |||||||||||||    
T  43216441 tcactattggttatggagaaaatgaaagagagataaaattaaatgtaatttgcatttaattttatgagaataaacaaaa 43216519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 7858694 - 7858516
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||| || |||  ||||||||||||||||||||||| |||||||||||||    
T  7858694 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttatttgaaaaaagttttataggaagatgtaaaaacaattttcat 7858595  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    || | |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  7858594 tgaccattgattatggaaaaaatgaaagagagagaaaattgaaagtaatttgcatttaattttatgagaataaacaaaa 7858516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 31734255 - 31734093
Alignment:
Q  100 taagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaa 199  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||    
T  31734255 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggatatggaaaaaatgaa 31734156  T
Q  200 agagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    ||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  31734155 agagagagaaaattgaatgtaatttgcatttaatttgatgagaataaacaaaagtttttcttg 31734093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 7022397 - 7022569
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||| || ||| |||||||||    
T  7022397 tcacatttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaataattttcat 7022496  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  7022497 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 7022569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 8712038 - 8711848
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| ||||||||||||||    |||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||| |||||||||    
T  8712038 tcacacttattaaaaaaactaaaacata----tttggagtatagttttttgtgtttt-tttggaaaaagttttataggaagatgtaaaaataattttcat 8711944  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaa-ttttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  8711943 tggctattggttatggaaaaaattaaagagagagaaaattgaatgtaatttgcatttaatttttatgagaataaacaaaagtttttcttggaaaag 8711848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 26483698 - 26483526
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||| ||||||| |||||||||||||    
T  26483698 tcacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcat 26483599  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||  |||||||    
T  26483598 tggctattgattatggaaaaaatgaaagaaagagaaaattgaatgtaatttacatttaattttacgagaataa 26483526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 94 - 256
Target Start/End: Complemental strand, 28348756 - 28348595
Alignment:
Q  94 aaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaa 193  Q
    ||||||||||||||||||||||||| |||||| | |||||| |||||||||||||||||| ||||| ||||||||| |||||||||||||||||||| ||    
T  28348756 aaaacataagaatttggagtatagtattttgtattttctttggaaaaagttttataggaatatgtaaaaacaatttccattggctattggttatgga-aa 28348658  T
Q  194 aatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttt 256  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  28348657 aatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaaccaaagttt 28348595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 34158284 - 34158463
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaa-agttttataggaagatgtagaaacaattttca 172  Q
    ||||| || ||||||||| |||||||||||||| ||||||||||||| |||||| ||||||| |||| ||||||||||||||||||| ||||||||||||    
T  34158284 tcacatttattaagaaaattaaaacataagaatctggagtatagtttgttgtgttttctttaaaaaaaagttttataggaagatgtaaaaacaattttca 34158383  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||| |||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||    
T  34158384 ttgactattggttatgaaaaaaacaaaagagagagaaaattgaatgtaatttgcatttaattttatgataataaacaaaa 34158463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 88 - 252
Target Start/End: Original strand, 15957919 - 15958085
Alignment:
Q  88 aaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttat 187  Q
    |||||||||| ||||||| |||||||||||||| |||||| ||||||  ||||||||||||||||| | ||| |||||||||||||| ||||||||||||    
T  15957919 aaaactaaaatataagaaattggagtatagtttattgtgttttctttgaaaaaagttttataggaataagtaaaaacaattttcatttgctattggttat 15958018  T
Q  188 ggaaaaaatgaa--agagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  15958019 ggaaaaaatgaaagagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 15958085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 30575828 - 30575987
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagtttt-ataggaagatgtagaaacaattttca 172  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |||||||||| | ||||| ||||| ||||||||||||    
T  30575828 tcacacttattaagaaaactaaaacataaaaatttggagtaaagttttttgtgttttctttaaaaaaagtttttacaggaaaatgtaaaaacaattttca 30575927  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaa 232  Q
    |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  30575928 ttggctattggttatggaaaaaatgaaagagagagaaaattaaaagtaatttgcatttaa 30575987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 13143904 - 13143742
Alignment:
Q  100 taagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaa 199  Q
    |||||||||| |||||| |||||||||| ||| ||  ||||||||| ||||||||||||| |||||||||||||||||| |||||| ||| |||||||||    
T  13143904 taagaatttgaagtataattttttgtgttttcgttgaaaaaagtttcataggaagatgtaaaaacaattttcattggctgttggttgtgggaaaaatgaa 13143805  T
Q  200 agagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    ||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13143804 agagagaaaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttg 13143742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 35456038 - 35456206
Alignment:
Q  93 taaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaa 192  Q
    ||||||||||||||||| ||||||||||||| ||| || ||| ||||||||||||||| |||||||| |||||||||||||||||||||  |||||||||    
T  35456038 taaaacataagaatttgaagtatagttttttatgtttttttt-gaaaaagttttatagaaagatgtaaaaacaattttcattggctattaattatggaaa 35456136  T
Q  193 aaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    |||| ||||||| |||||| |||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  35456137 aaataaaagagagagaaaaatgaatgtaatttacatttaattttatgagaataaacaaaagttcttcttg 35456206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 74 - 263
Target Start/End: Original strand, 13143939 - 13144144
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattcttt-agaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| ||||||||||||    
T  13143939 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaaagttttataggaagatgtaaaaacaattttca 13144038  T
Q  173 ttggctattggttatggaaaaaatgaa----------------agagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttt 256  Q
    || | |||||||||||| |||||||||                ||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  13144039 ttagttattggttatgg-aaaaatgaaagagagagagagagagagagagagaaaattgaatgtaatttgcatttaattttatgaaaataaacaaaagttt 13144137  T
Q  257 ttcttgg 263  Q
    |||||||    
T  13144138 ttcttgg 13144144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 83 - 252
Target Start/End: Original strand, 41086389 - 41086558
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    ||||||||||||||  |||| |||||| | ||||||||||||||| ||||||  |||||||||||||  |||||||| ||||||||||||||||||||||    
T  41086389 ttaagaaaactaaataataaaaatttgaattatagttttttgtgttttctttgaaaaaagttttatataaagatgtaaaaacaattttcattggctattg 41086488  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    || ||||||||||| ||| ||| |||||||| |||||||||||||||||||||||| |||||||||||||    
T  41086489 gtaatggaaaaaataaaacagagagaaaattcaatgtaatttgcatttaattttatgagaataaacaaaa 41086558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 29920262 - 29920456
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||| |||| | ||||||||||  ||||| ||| |||||| || |||||||||| |||||||||||||    
T  29920262 tcacacttattaagaaaactaaaacataagaatttgaagtacaattttttgtgttatctttggaataagtttcatgggaagatgtaaaaacaattttcat 29920361  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||| ||||||| |||||  ||||||  ||||||||||||||||| | ||||||||| || ||||||| |||||| ||||||||| ||||    
T  29920362 tggctattgattatggacaaaatagaagagagggaaaattgaatgtaattggtatttaatttcatgagaataagcaaaaggttttcttggaaaag 29920456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 252
Target Start/End: Original strand, 8107620 - 8107789
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagtttttt-gtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctatt 181  Q
    |||| |||| ||||| ||||||||||||||||||||||||| || | ||||||  ||||||||||| |  | |||||| |||||||||||||||||||||    
T  8107620 ttaaaaaaattaaaatataagaatttggagtatagtttttttgtattttctttgaaaaaagttttacaatatgatgtaaaaacaattttcattggctatt 8107719  T
Q  182 ggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||    
T  8107720 ggttatggataaa-tgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaaaaaaa 8107789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 74 - 262
Target Start/End: Original strand, 8709780 - 8709966
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||||||  ||| |||||||||||||||||||||||||||||||||||||||| ||||||  || |||| | || |||||| ||| ||||| |||||||    
T  8709780 tcacacttaataaaaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaataagtctcatgggaagaagtaaaaacatttttcat 8709879  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    || ||||  |||||||| |||||  |||||  ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  8709880 tgactatatgttatggagaaaatagaagag--agaaaattgaatgtaatttgcatttaattttatgagaataagaaaaagtttttcttg 8709966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 84 - 252
Target Start/End: Original strand, 15824641 - 15824803
Alignment:
Q  84 taagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattgg 183  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| || | |||||||| |||||      ||||||||||||    
T  15824641 taagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaaca------attggctattgg 15824734  T
Q  184 ttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||| |||||||| |||||| |||||||| |||||||||| |||||||||| || |||||||||||||    
T  15824735 ttatgaaaaaaatggaagagagagaaaatttaatgtaattttcatttaatttcatgagaataaacaaaa 15824803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 74 - 258
Target Start/End: Original strand, 4046887 - 4047072
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttt-tgtgtattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| ||||||||| ||||  ||||||||||| || ||||||||| ||||| ||||||| || |||||| || | || ||||| ||| ||||||||    
T  4046887 tcacacttattaagaaaattaaagtataagaatttgtagcatagtttttgtgtgttttctttataataagtttcatggaaatatgtaaaaataattttca 4046986  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    ||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| || |||||||  ||||||||||    
T  4046987 ttggcaattggttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataagaaaaagttttt 4047072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 88 - 257
Target Start/End: Original strand, 16879400 - 16879569
Alignment:
Q  88 aaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttat 187  Q
    |||||||||| ||||||||||| |||||| |||||||||| ||||||  || || ||| || |||| ||||| |||||||||| |||| |||||| ||||    
T  16879400 aaaactaaaatataagaatttgaagtataattttttgtgttttctttgaaataaatttcatgggaatatgtaaaaacaatttttattgactattgattat 16879499  T
Q  188 ggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttt 257  Q
    ||  ||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  16879500 ggtgaaaatgaaagagagagaaaattgaatgtagtttgtatttaatttcataagaataaacaaaagtttt 16879569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 88 - 224
Target Start/End: Complemental strand, 35525737 - 35525603
Alignment:
Q  88 aaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttat 187  Q
    ||||||||||||||||||||| ||||||||||||  |||| ||||||  ||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  35525737 aaaactaaaacataagaatttagagtatagtttt--gtgttttctttgaaaaaagttttacaggaagatgtaaaaacaattttcattgactattggttat 35525640  T
Q  188 ggaaaaaatgaaagagaaagaaaattgaatgtaattt 224  Q
    ||||||||| ||||||| |||||||| ||||||||||    
T  35525639 ggaaaaaataaaagagagagaaaatttaatgtaattt 35525603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 151 - 252
Target Start/End: Complemental strand, 7499816 - 7499714
Alignment:
Q  151 gaagatgtagaaacaattttcattggctattggttatggaaaaaa-tgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaaca 249  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  7499816 gaagatgtaaaaacaattttcattggctattggttatggaaaaaaatgaaagagagagaaaattgaatgtaatttacatttaattttatgagaataaaca 7499717  T
Q  250 aaa 252  Q
    |||    
T  7499716 aaa 7499714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 74 - 209
Target Start/End: Original strand, 16358106 - 16358240
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| ||||| |||| |||||| ||||||||||||| ||| |||||| |||||||||| ||||||||||||| || ||||||||||    
T  16358106 tcacacttattaagaaaattaaaatataaaaatttgaagtatagttttttttgttttcttt-gaaaaagtttcataggaagatgtaaaatcaattttcat 16358204  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaa 209  Q
    || |||||| ||||| ||||||||||||||| ||||    
T  16358205 tgactattgattatgaaaaaaatgaaagagagagaa 16358240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 3642039 - 3642127
Alignment:
Q  149 aggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttat 238  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  3642039 aggaagatgtaaaaacaatttt-attggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcattttattttat 3642127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 2052937 - 2052830
Alignment:
Q  137 aaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| || ||| |||||  |||||  ||||||||||||||||||||||||||||||     
T  2052937 aaaaagttttatgggaagatgtaaaaacaattttcattggctattggctagggagaaaatagaagag--agaaaattgaatgtaatttgcatttaatttc 2052840  T
Q  237 ataagaataa 246  Q
    || |||||||    
T  2052839 atgagaataa 2052830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 17713389 - 17713227
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| ||||||||||||||  | |||| |  ||||||| ||||||  || ||  || ||||||||||||||||| || |||||||||||||    
T  17713389 tcacacttattaaaaaaactaaaacatagtattttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatttaaaaacaattttcat 17713290  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||| |||||||||| ||||||||| |||||| || | |||||||| | |||||||||||||||    
T  17713289 tggttattggttattgaaaaaatggaagagagagcacattgaatgcactttgcatttaatttt 17713227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 26954452 - 26954548
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||||||||| |||||||||||||||| | |||||||| || |||||||||||||||| ||| |||||| | |||||||||||||||    
T  26954452 aagttttataggaagatgtaaaaacaattttcattggttgttggttattgagaaaatgaaagagaaagcaaaatgaatgcactttgcatttaatttt 26954548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 2628158 - 2628320
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||| ||||||||  | |||| |  ||||||| ||||||  || ||| || |||||||||||||||||||| ||| |||||||||    
T  2628158 tcacacttattaagaaaaccaaaacatagtagtttgcaacatagtttcttgtgttatccttaaaataagttttataggaagatgtaaaaataattttcat 2628257  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||| ||||| |||| || ||||||||||||| || |||||||||  | |||||||| ||||||    
T  2628258 tggttattgcttattgagaaaatgaaagagagagcaaattgaattcactttgcattaaatttt 2628320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 41362310 - 41362463
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||||||||||||||||||  | |||| |  ||||||||||||||  |||||  || |||||||||||||||||||| ||||||||||||||||   |||    
T  41362310 ttaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattggtagttg 41362409  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
     |||| || ||||||||| ||  || ||||| |||| | |||||||||||||||    
T  41362410 attatagagaaaatgaaaaagtgagcaaattaaatgcactttgcatttaatttt 41362463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 2053029 - 2052947
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagat 156  Q
    |||||||| |||||||||||||||||||| |||| | |||||| |||||||||| |||||||||| ||||||||| |||||||    
T  2053029 tcacacttattaagaaaactaaaacataataattagaagtataattttttgtgttttctttagaataagttttatgggaagat 2052947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 8673507 - 8673385
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaatt 213  Q
    ||||||||||||||  | |||  || |||||||||| ||||||||| ||||||||||||||||   ||| |||| || ||||||||| ||| || |||||    
T  8673507 atagttttttgtgttatatttgaaataagttttataagaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaaaagagagcaaatt 8673408  T
Q  214 gaatgtaatttgcatttaatttt 236  Q
    ||||||| |||||||||||||||    
T  8673407 gaatgtactttgcatttaatttt 8673385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 236
Target Start/End: Complemental strand, 8745740 - 8745587
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgt-attctttagaaaaagttttataggaagatgtagaaacaattttcattggctatt 181  Q
    |||||||||||||||||||  | |||| |  ||||||| |||||| |||||| | || |||||||||||||||||||| |||||||||||||||| | ||    
T  8745740 ttaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttattcttga-aataagttttataggaagatgtaaaaacaattttcattggttgtt 8745642  T
Q  182 ggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    | |||| |||||||| |||| || || ||||| ||  || |||||||||||||||    
T  8745641 gattatagaaaaaataaaagggagagcaaattaaaaatagtttgcatttaatttt 8745587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 17336908 - 17336746
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||| |||  | |||| |  ||||||||||||||  |||||  || || ||||||||||||||||| |||||||||||||    
T  17336908 tcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgtcatctttgaaataaattttataggaagatgtaaaaacaattttcat 17336809  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||   ||| |||| ||  ||||||||  || || |||||||||| | |||||||||||||||    
T  17336808 tggtagttgattatagagtaaatgaaaaggagagcaaattgaatgcactttgcatttaatttt 17336746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 74 - 200
Target Start/End: Original strand, 44663786 - 44663909
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||  |||||||||| |||||||||||   |||| |||||| ||| || |||||| | |||||||| ||| |||||| ||    
T  44663786 tcacacttattaagaaaactaaattataagaatttagagtatagttt---gtgttttctttggaataaattttatggaaagatgtaaaaataatttttat 44663882  T
Q  174 tggctattggttatggaaaaaatgaaa 200  Q
    ||||||||| ||| ||| |||||||||    
T  44663883 tggctattgattagggacaaaatgaaa 44663909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 25195085 - 25195202
Alignment:
Q  118 ttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaat 217  Q
    ||||||||||  ||||| |||| | ||||||||||||||||| ||||||||||||||||   ||| |||| || ||||||||| ||| || |||||||||    
T  25195085 ttttttgtgttatcttt-gaaataattttataggaagatgtaaaaacaattttcattggtggttgattatagagaaaatgaaaaagagagcaaattgaat 25195183  T
Q  218 gtaatttgcatttaatttt 236  Q
    | | |||||||||||||||    
T  25195184 gcactttgcatttaatttt 25195202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 253
Target Start/End: Complemental strand, 41756022 - 41755913
Alignment:
Q  143 ttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataaga 242  Q
    |||||||| || ||||| ||| ||| |||||||  ||||| ||||||||||| ||||||||| | ||||||||||||||||| |||||||||| || | |    
T  41756022 ttttatagaaaaatgtaaaaataatgttcattgattattgcttatggaaaaa-tgaaagagagaaaaaattgaatgtaatttacatttaatttcatgata 41755924  T
Q  243 ataaacaaaag 253  Q
    |||||||||||    
T  41755923 ataaacaaaag 41755913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 45190750 - 45190700
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttg 124  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45190750 tcacacttgttaagaaaactaaaacataagaatttggagcatagttttttg 45190700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 74 - 235
Target Start/End: Complemental strand, 5217557 - 5217397
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||| |||||| | | ||| ||  |||||| ||||||  || ||  || |||||| |||| |||||||| |||||||||| ||    
T  5217557 tcacacttattaagaaaactataacata-gtagttgcagcgtagtttcttgtgttatccttgaaataagtttcatagaaagatgtaaaaacaatttttat 5217459  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    ||| |||| ||||| || |||||||||||||||| | | |||||| || |||||||||||||    
T  5217458 tggttattagttatagagaaaatgaaagagaaagcataatgaatgcaaattgcatttaattt 5217397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 34900090 - 34899928
Alignment:
Q  75 cacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattct-ttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||||| |||||||||||||||||||| ||||||   |||| |||||||||| | || |||||| ||||||||||||| ||| || ||| |||||| ||    
T  34900090 cacacttattaagaaaactaaaacataataatttgcgatatatttttttgtgt-tcctcttagaataagttttataggaggatttaaaaataattttgat 34899992  T
Q  174 tggctattggttatggaaaaaat-gaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    ||| ||||| | ||||| ||| |  ||||| |||  |||||||||| |||| |||||||||||||    
T  34899991 tggttattgatcatggagaaagtataaaga-aaaacaaattgaatgaaattagcatttaatttta 34899928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 4480911 - 4480841
Alignment:
Q  104 aatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcatt 174  Q
    |||||||||||||| |||||||||  |||||| || ||||||||| |||||||||| ||| ||||||||||    
T  4480911 aatttggagtataggtttttgtgttatctttaaaataagttttattggaagatgtaaaaataattttcatt 4480841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 187
Target Start/End: Complemental strand, 8712690 - 8712577
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||||||||||||||||||  || ||| ||| |||||| ||||||  |  || ||| ||||||||||| |||||||| |||||||||| ||    
T  8712690 tcacatttattaagaaaactaaaacatagtaacttgcagtttagtttcttgtgttattattggaataagttttatagaaagatgtaaaaacaatttttat 8712591  T
Q  174 tggctattggttat 187  Q
    ||| |||| |||||    
T  8712590 tggttattagttat 8712577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 4038941 - 4039037
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||| ||||||||| |||||||||||||| |   ||| |||| || ||||||||| ||| || |||||||||| | ||| |||||||||||    
T  4038941 aagttttatatgaagatgtaaaaacaattttcatttgtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttacatttaatttt 4039037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 7670813 - 7670749
Alignment:
Q  167 ttttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcattta 231  Q
    |||||||| |||||| |||||||| |||||| || ||| ||||||||||||||||||| ||||||    
T  7670813 ttttcatttgctattagttatggagaaaatggaatagagagaaaattgaatgtaattttcattta 7670749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 11158723 - 11158675
Alignment:
Q  78 acttgttaagaaaactaaaacataagaatttggagtatagttttttgtg 126  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||    
T  11158723 acttattaagaaaactaaaacataagaatttggaatataattttttgtg 11158675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 27819759 - 27819663
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||||||||||  |||||||| ||||| |||| ||||  |||||||||| || ||||| |||| || || ||||| |||||| |||||||||||||||    
T  27819759 aagttttatataaagatgtaaaaacattttttattgattattggttatagagaaaataaaagggagagcaaattaaatgtagtttgcatttaatttt 27819663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 38072329 - 38072169
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||||||||||||||||||  | |||| |  ||||||||||||||  |||||  |  ||||||||||  || ||||| |||||||||||||    
T  38072329 tcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaattaagttttataaaaaaatgtaaaaacaattttcat 38072230  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatt 234  Q
    |||   ||| |||| || ||||||||| | | || |||||||||| | |||| ||||||||    
T  38072229 tggtagttgattatagagaaaatgaaaaaaagagcaaattgaatgcactttgtatttaatt 38072169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 14576244 - 14576301
Alignment:
Q  179 attggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||||||||| || ||||||||||||| || |||||||||| | |||||||||||||||    
T  14576244 attggttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 14576301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 262
Target Start/End: Original strand, 33563571 - 33563698
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggc--tattggttatggaaaaaatg--aaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    ||||||||| |||||||||| ||||||||||||||| |  | ||||||||| | ||||||   |||||| || | |||||||||||||| | ||||||||    
T  33563571 aagttttatgggaagatgtaaaaacaattttcattgaccattttggttatgcagaaaatggagaagagagaggagattgaatgtaatttacgtttaattt 33563670  T
Q  236 tataagaataaacaaa-agtttttcttg 262  Q
     || |||||||  ||| |||||||||||    
T  33563671 catgagaataagtaaagagtttttcttg 33563698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10737934 - 10737966
Alignment:
Q  1 gtcaatgtctaccatttatttttaagagacata 33  Q
    |||||||||||||||||||||||||||||||||    
T  10737934 gtcaatgtctaccatttatttttaagagacata 10737966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 28497198 - 28497253
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaa 195  Q
    ||||||||| |||||||||| ||||||||||||||   |||||||||| |||||||    
T  28497198 aagttttatgggaagatgtaaaaacaattttcattacttattggttattgaaaaaa 28497253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 31133023 - 31133186
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||| || ||   |||||  ||||| ||||||||||  || || ||| || ||| || | |||||||| ||| |||| ||||    
T  31133023 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaatttcatggaaagatgtaaaaataattctcat 31133122  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    ||| ||    ||||||| ||||| |||  || | ||||||||||| ||||||||||||||||||    
T  31133123 tggttaaaaattatggagaaaataaaaaggagaaaaaattgaatgcaatttgcatttaatttta 31133186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 181
Target Start/End: Complemental strand, 6401784 - 6401679
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtg-tattctttagaaaaagttttataggaagatgtagaaacaattttcatt 174  Q
    |||||| |||||||| |||||| |||  |||||| |||||||||||||||| ||||||| | || ||||||  ||  |||||||| ||||||||| ||||    
T  6401784 acacttattaagaaatctaaaatatagtaatttgtagtatagttttttgtgttattcttga-aataagtttcctaaaaagatgtaaaaacaatttccatt 6401686  T
Q  175 ggctatt 181  Q
    || ||||    
T  6401685 ggttatt 6401679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 17314992 - 17314834
Alignment:
Q  78 acttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggc 177  Q
    |||| |||||||||||||||||||  | |||| |  |||| |||||||||  |||||  || || ||| ||| ||| ||||| || |||||||||||||     
T  17314992 acttattaagaaaactaaaacatagtagtttgtaacatagctttttgtgtcatctttgaaataaatttcatacgaaaatgtaaaagcaattttcattggt 17314893  T
Q  178 tattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
      ||| |||| || |||||||||  || || |||||||||| | |||| ||||||||||    
T  17314892 agttgattatagagaaaatgaaaaggagagcaaattgaatgcactttggatttaatttt 17314834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 40773397 - 40773499
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||| |||||||||| |||| ||||||||||||| |||| ||||| ||  | |||| ||||||||   ||||||||| ||| |||||| ||    
T  40773397 tcacatttattaaaaaaactaaaatataacaatttggagtataattttgtgtgtttttctaagaataagttttaacagaagatgtaaaaataatttttat 40773496  T
Q  174 tgg 176  Q
    |||    
T  40773497 tgg 40773499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 374103 - 374162
Alignment:
Q  161 aaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaat 222  Q
    |||||||||| |||| |||||| ||||||| ||||||||||| ||| |||||||||||||||    
T  374103 aaacaatttt-attgtctattgattatggagaaaatgaaaga-aaaaaaaattgaatgtaat 374162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 16643484 - 16643387
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    ||||||||| | |||||||| | ||| || |||||||  | || ||||||| ||||| |||  ||||  || ||||||||||||||||||||||||||    
T  16643484 aagttttatggaaagatgtaaatacatttctcattggtcaatgattatggagaaaataaaaaggaaaataacttgaatgtaatttgcatttaatttta 16643387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 7499881 - 7499821
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattcttt 134  Q
    ||||| || ||||||||||||||||||| |||||| |||||||  |||||| || ||||||    
T  7499881 tcacatttattaagaaaactaaaacataggaatttagagtataactttttgcgttttcttt 7499821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 93 - 271
Target Start/End: Original strand, 20123691 - 20123869
Alignment:
Q  93 taaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaa 192  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  20123691 taaaacataagaatttggagtatagttttttgtgtattctttggaaaaagttttatagcaagatgtaaaaacaattttcattggctattgcttatggaaa 20123790  T
Q  193 aaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaagcga 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20123791 aaatgaaagagaaagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttgggaaagcga 20123869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 76 - 263
Target Start/End: Complemental strand, 25944742 - 25944555
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| ||||||||||||||| ||||||||||||||||||  ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||    
T  25944742 acacttattaagaaaactaaaatataagaatttggagtataagtttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 25944643  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    || |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25944642 gccattggttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttgg 25944555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 18102698 - 18102520
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||    
T  18102698 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 18102599  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||    
T  18102598 tggccattggttatggaaaaaatgaaagagagtgaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 18102520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 14806037 - 14805866
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||| |||||||||||||    
T  14806037 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttcttt-gaaaaagttttataggaagatgtaaaaacaattttcat 14805939  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  14805938 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 14805866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 15253031 - 15252860
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||| |||||||||||||    
T  15253031 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttcttt-gaaaaagttttataggaagatgtaaaaacaattttcat 15252933  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  15252932 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 15252860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 45486123 - 45485951
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||||    
T  45486123 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaataattttcat 45486024  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  45486023 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 45485951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 46760249 - 46760421
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||    
T  46760249 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 46760348  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||| |||||||    
T  46760349 tggctattggttatggaaaaaatgaaagaaagagaatattgaatgtaatttgcatttaattttatgagaataa 46760421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 6191213 - 6191035
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||    
T  6191213 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttaaaaaagttttataggaagatgtaaaaacaattttcat 6191114  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||| ||||||||||||| | |||||| |||||||||| ||||||||||||| |||||||||||||    
T  6191113 tggctattggttatggagaaaatgaaagagagataaaattaaatgtaattttcatttaattttatgagaataaacaaaa 6191035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 25737619 - 25737791
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||| ||||||| |||||||||| ||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  25737619 tcacacttattaagaaaactaaaacataaaaatttggggtatagttttgtgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 25737718  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  25737719 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 25737791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 35923419 - 35923248
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||| |||||||| |||||||||||||    
T  35923419 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttt-gtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcat 35923321  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  35923320 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 35923248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 4910627 - 4910819
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| || | |||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||    
T  4910627 tcacacttatttaaaaaactaaaacataagaatttgaagtata--tttttgtgttttctttagaaaaagttttataggaagatgtaaaaataattttcat 4910724  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || |||||||||| |||||||||| ||||    
T  4910725 tggctattgattatggaaaaaatgaaagagagataaaattgaatgtaatttgcatttaattttatgagcataaacaaaactttttcttggaaaag 4910819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 19912761 - 19912933
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| || ||||| |||||||||||||    
T  19912761 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtaaaatgtaaaaacaattttcat 19912860  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| || |||||||    
T  19912861 tggttattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttcatgagaataa 19912933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 74 - 256
Target Start/End: Complemental strand, 47779772 - 47779590
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||| |||||||||||| || |||||||||||||| |||||||||| |||||| || |||||||||| |||||||||||||    
T  47779772 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttagaataagtttcatgggaagatgtaaaaacaattttcat 47779673  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttt 256  Q
    |||| | |||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| || |||||||  ||||||||    
T  47779672 tggcaactggttatggaaaaaataaaagaaagagaaaattaaatgtaatttgcatttaatttcatgagaataagaaaaagttt 47779590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 132 - 268
Target Start/End: Complemental strand, 9158199 - 9158064
Alignment:
Q  132 tttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcattta 231  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  9158199 tttaaaaaaagttttataggaagatgtaaaaacaattttctttggccattggttatg-aaaaaatgaaagagaaaaaaatttgaatgtaatttgcattta 9158101  T
Q  232 attttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||||||||||||||||||||||||||| ||||    
T  9158100 attttataagaataaacaaaagtttttcttggaaaag 9158064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 76 - 262
Target Start/End: Complemental strand, 14574730 - 14574544
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||| | || |||||| || |||||||||| ||| ||||| |||||    
T  14574730 acacttattaagaaaaccaaaatataagaatttggagtatagttttttgtgttttcttgataataagtttcatgggaagatgtaaaaataatttccattg 14574631  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
     |||||||||||| | |||||| ||||||  ||||||||| | |||||||||||||||||||| ||||||| |||||||||||||||    
T  14574630 tctattggttatgaagaaaatggaagagagtgaaaattgattttaatttgcatttaattttatgagaataagcaaaagtttttcttg 14574544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 22632257 - 22632079
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||| ||||| | |||| || |||| ||||||||| ||||||  || |||||| || |||||||||| |||||||||||||    
T  22632257 tcacacttattaagaaaactaaagcataaaagtttgtagcatagatttttgtgttttctttgaaataagtttcatgggaagatgtaaaaacaattttcat 22632158  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||| |||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||| || ||||||| |||||    
T  22632157 tggatattggttatggaaaaaatggaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataagcaaaa 22632079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 105 - 252
Target Start/End: Original strand, 47557622 - 47557771
Alignment:
Q  105 atttggagtatagttttttgtgtattctttag--aaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaaga 202  Q
    ||||||||||||||||||||||| || |||    |||||  |||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  47557622 atttggagtatagttttttgtgtttttttttttaaaaaaaatttataggaagatgtaaaaacaattttcattggctattaattatggaaaaaatgaaaga 47557721  T
Q  203 gaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  47557722 gaaagaaaattaaatgtaatttgcatttaattctatgagaataaacaaaa 47557771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 262
Target Start/End: Complemental strand, 15995886 - 15995699
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagtttttt-gtgtattctttagaaaaagttttataggaagatgtagaaacaattttcatt 174  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||||| |||| ||||| | || |||||| || | |||||||| ||| ||||| ||||    
T  15995886 acacttattaagaaaaccaaaatataagaatttggagtatagtttttttgtgttttcttcataataagtttcatggaaagatgtaaaaataatttccatt 15995787  T
Q  175 ggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    || ||||||||||| | |||||| ||||||  ||||||||| | |||||||||||||||||||| ||||||| |||||||||||||||    
T  15995786 ggttattggttatgaagaaaatggaagagagtgaaaattgattttaatttgcatttaattttatgagaataagcaaaagtttttcttg 15995699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 74 - 204
Target Start/End: Original strand, 12632336 - 12632466
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||||||| ||| ||||||  ||||||||| ||||||||||||| |||||||||||||    
T  12632336 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttatgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcat 12632435  T
Q  174 tggctattggttatggaaaaaatgaaagaga 204  Q
    |||||||||| | |||||||||| |||||||    
T  12632436 tggctattggctgtggaaaaaataaaagaga 12632466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 100 - 261
Target Start/End: Original strand, 2610586 - 2610747
Alignment:
Q  100 taagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaa 199  Q
    ||||||||||||||||| ||||||| |  | |||| ||| ||  ||||||| |||||||| ||||| ||||| |||||||||||||||||| |||||| |    
T  2610586 taagaatttggagtatatttttttgcgcttcctttggaataaaatttatagaaagatgtaaaaacatttttctttggctattggttatggagaaaatgga 2610685  T
Q  200 agagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
    ||||||  |||||||||||||||||||| ||||||| || ||||||||||||||||||||||    
T  2610686 agagaagaaaaattgaatgtaatttgcacttaatttcatgagaataaacaaaagtttttctt 2610747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 83 - 252
Target Start/End: Complemental strand, 44683036 - 44682868
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||||||||||| || |||||||||||||||||| | |||||||| || ||| ||| |||||| ||  ||||||||| ||||||||||||||| ||||||    
T  44683036 ttaagaaaactagaaaataagaatttggagtataatattttgtgttttttttggaataagtttgatgcgaagatgtaaaaacaattttcattgactattg 44682937  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||| | |||||||||| | ||||||||| |||||||||||| ||||||| || |||||||||||||    
T  44682936 gttatgg-agaaatgaaagatatagaaaattggatgtaatttgcaattaatttcatgagaataaacaaaa 44682868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 88 - 258
Target Start/End: Complemental strand, 11780171 - 11780002
Alignment:
Q  88 aaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttat 187  Q
    |||||||||| ||||||||||||| |||||||||| |||| ||||||| || || |||||| |||||||||| ||| ||||| ||||| |||||  ||||    
T  11780171 aaaactaaaatataagaatttggaatatagtttttcgtgttttctttaaaataaattttattggaagatgtaaaaataattt-cattgactatttcttat 11780073  T
Q  188 ggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    | | |||||| |||| | ||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  11780072 gaagaaaatggaagaaagagaaaatttgatgtaatttgcatttaattttatgagaataaacaaaagttttt 11780002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 74 - 235
Target Start/End: Complemental strand, 16917639 - 16917479
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| |||||||||| |||||| | ||||   |||||| | |||||| ||| |||||| || |||||||||| |||||||||||||    
T  16917639 tcacacttattaagaaaattaaaacataaaaatttgaaatataacattttgttttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 16917540  T
Q  174 tggctattggttatg-gaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    |  |||||||||||| |||||   |||| ||  ||||||||||| ||||||||||||||||||    
T  16917539 taactattggttatgtgaaaatgggaaatag--agaaaattgaaagtaatttgcatttaattt 16917479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 151 - 261
Target Start/End: Original strand, 4237784 - 4237893
Alignment:
Q  151 gaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaa 250  Q
    ||||||||| ||| |||||| ||||||||||| ||| | | |||||| |||||||| | |||||||| |||||||||||||||||||| ||||| |||||    
T  4237784 gaagatgtaaaaataattttaattggctattgattaggaagaaaatggaagagaaatataattgaatataatttgcatttaattttattagaat-aacaa 4237882  T
Q  251 aagtttttctt 261  Q
    |||||||||||    
T  4237883 aagtttttctt 4237893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 221
Target Start/End: Original strand, 31549936 - 31550042
Alignment:
Q  115 tagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattg 214  Q
    |||||||||| || |||||||||| || ||||||||||||||||| |||||| |||||||| | ||||||||||| ||||| |  ||| |||||||||||    
T  31549936 tagttttttgcgttttctttagaataaattttataggaagatgtaaaaacaactttcattgacaattggttatgggaaaaaggggagaaaaagaaaattg 31550035  T
Q  215 aatgtaa 221  Q
    |||||||    
T  31550036 aatgtaa 31550042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 48413867 - 48413728
Alignment:
Q  88 aaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttat 187  Q
    ||||||| ||||||||||||||||||||| |||| |||   || ||||  | |||||||||  ||||||| | ||||||||||||||| |||||||||||    
T  48413867 aaaactacaacataagaatttggagtataattttgtgt---tttttta--ataagttttatgagaagatgcaaaaacaattttcattgactattggttat 48413773  T
Q  188 ggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    ||| |||||  |||||  |||||||||||| |||||||||||||||||    
T  48413772 ggagaaaatagaagag--agaaaattgaat-taatttgcatttaattt 48413728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 151 - 261
Target Start/End: Original strand, 27810804 - 27810914
Alignment:
Q  151 gaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaa 250  Q
    ||||||||| |||||||||| ||||| ||||| ||||  | |||||| ||||||  ||||||||||||||||||||||||||||| || ||||||   ||    
T  27810804 gaagatgtaaaaacaatttttattggttattgattatatagaaaatggaagagatggaaaattgaatgtaatttgcatttaatttcatgagaatatgtaa 27810903  T
Q  251 aagtttttctt 261  Q
    |||||||||||    
T  27810904 aagtttttctt 27810914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 106 - 251
Target Start/End: Original strand, 35068872 - 35069004
Alignment:
Q  106 tttggagtatagtttttt-gtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagaga 204  Q
    |||||| ||||||||||| |||| ||||||  ||||||||||||||||||||||| |||||||||| ||| ||||||||||||            |||||    
T  35068872 tttggaatatagtttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttaattagctattggttat------------agaga 35068959  T
Q  205 aagaaaattgaatgtaatttgcatttaattttataagaataaacaaa 251  Q
    |  |||||||||||||||||||||||||| |||| ||||||||||||    
T  35068960 a--aaaattgaatgtaatttgcatttaatattatgagaataaacaaa 35069004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 39170636 - 39170540
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||| ||||||||| |||||||||||||| |  |||| |||| || ||||||||||||| || |||||||||| | |||||||||||||||    
T  39170636 aagttttatacgaagatgtaaaaacaattttcatttgtcattgattattgagaaaatgaaagagatagcaaattgaatgcactttgcatttaatttt 39170540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 24151640 - 24151734
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    |||||||||||||||||||| |||||||||||| ||  |||||||||| || |||| |||||||| || |||||||||||| ||||||| ||||||    
T  24151640 aagttttataggaagatgtaaaaacaattttcactgattattggttattgagaaaa-gaaagagagagcaaattgaatgtactttgcatgtaattt 24151734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 38260484 - 38260322
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgt-attctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| |||| |||| ||||||||   | |||| | ||||||||||||||| |||||| | || ||||||||||| ||| |||| ||| ||||||||    
T  38260484 tcacacttattaaaaaaattaaaacattgtagtttgtaatatagttttttgtgttattcttga-aataagttttatagaaagttgtaaaaataattttca 38260386  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||| ||||  |||| || ||||||||||||| || ||||| |||| | |||||||||||||||    
T  38260385 ttggttatttattattgagaaaatgaaagagagagcaaattaaatgcactttgcatttaatttt 38260322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 4069108 - 4069039
Alignment:
Q  137 aaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaa 206  Q
    |||||||||||||| |||||||| ||| |||||||||||| ||||||||||||| |||||| ||||||||    
T  4069108 aaaaagttttatagaaagatgtaaaaagaattttcattggttattggttatggagaaaatggaagagaaa 4069039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 261
Target Start/End: Original strand, 19492394 - 19492574
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagtt--ttataggaagatgtagaaacaattttcattggctat 180  Q
    |||||||||||||||||||| ||||| |||||||  ||||||| | || |||  | ||| ||  | || | || ||| | |||||||||| || | || |    
T  19492394 ttaagaaaactaaaacataaaaatttagagtataactttttgtatttttttttaataaatttcatcatggtaatatgcaaaaacaatttttatcgactgt 19492493  T
Q  181 tggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
    |||||||||| |||||  ||||||||||||||||||| ||||||| ||||||||| ||  ||||||  |||||||||||||    
T  19492494 tggttatggagaaaatagaagagaaagaaaattgaatataatttgtatttaatttcatgcgaataagtaaaagtttttctt 19492574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 74 - 235
Target Start/End: Complemental strand, 29713357 - 29713196
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||||| |||| |   |||| |||||||||| ||||||  ||||||||| || ||| |||| ||| |||| |||||||||||||    
T  29713357 tcacatttattaagaaaactaagacatcattgtttgtagtatagtttcttgtgtcatctttagaataactttcatagaaagttgtaaaaacaattttcat 29713258  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    ||| ||||  |||| || |||||||||||||  | | | | ||| |||||||||||||||||    
T  29713257 tggatattaattatagagaaaatgaaagagagggtataataaatataatttgcatttaattt 29713196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 74 - 235
Target Start/End: Original strand, 37767011 - 37767172
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||||||||||||||||| | |||||||||||||||||||||||| ||||||| ||  | ||| || |||| || || |||||||||||||    
T  37767011 tcacatttattaagaaaactaaaacatgataatttggagtatagttttttgtgttttctttaaaactaatttcatgggaacatataaaaacaattttcat 37767110  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
        |||| | ||| |||||||||| || || |  ||||| |||| |||||||| |||||||    
T  37767111 caattatttgctatagaaaaaatgagagggagaacaaattaaatgcaatttgcacttaattt 37767172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 12633111 - 12633157
Alignment:
Q  206 agaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  12633111 agaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 12633157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 31768994 - 31769116
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaatt 213  Q
    ||||||||||||||  |||||  || |||||||||||||||||||| |||||||||||||||    ||| |||| || ||||| |||  || || |||||    
T  31768994 atagttttttgtgtcatctttgaaataagttttataggaagatgtaaaaacaattttcattgatagttgattatagagaaaataaaaatgagagcaaatt 31769093  T
Q  214 gaatgtaatttgcatttaatttt 236  Q
    ||||| | |||||||||||||||    
T  31769094 gaatgcactttgcatttaatttt 31769116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 35887961 - 35888123
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| ||||||||||||||  | |||| |  ||| ||||||||||  |||||  || || ||||||||||||||||| |||||||||||||    
T  35887961 tcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttgaaataacttttataggaagatgtaaaaacaattttcat 35888060  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    | |   ||| |||| || ||||| ||| ||| || |||||||||| | ||||||||| |||||    
T  35888061 tagtagttgattatagagaaaataaaaaagagagcaaattgaatgcactttgcattttatttt 35888123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20123379 - 20123424
Alignment:
Q  1 gtcaatgtctaccatttatttttaagagacatacttcctgcgtccc 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  20123379 gtcaatgtctaccatttatttttaagagacatacttcctccgtccc 20123424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 237
Target Start/End: Complemental strand, 33153202 - 33153039
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgta-ttctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| |||| ||||| ||||||||| | |||| |||||| ||||||||||  ||||| | | ||| |||||| | |||||||| |||||||| | |    
T  33153202 tcacacttattaaaaaaacaaaaacataatagtttgaagtataattttttgtgttcttcttgaaataaa-ttttatggaaagatgtaaaaacaattctta 33153104  T
Q  173 ttggctattggttatggaaaaaat-gaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    |||| || || ||||||| ||||| ||||| || |  |||||||||| ||||||||||||||||||    
T  33153103 ttggttaatgattatggagaaaatagaaag-gagaacaaattgaatgcaatttgcatttaatttta 33153039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 237
Target Start/End: Complemental strand, 48879549 - 48879388
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| ||||||||||||| || |||  |||||  ||||| |||||||| |  || || ||| ||||||||||| |||||||| ||| |||| ||||||    
T  48879549 acacttattaagaaaactaacacttaatgatttgaggtataattttttgtattctccttggaataagttttatagaaagatgtaaaaataattctcattg 48879450  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    | ||    ||||||| ||||| |||  || |  |||||||||| ||||||||||||||||||    
T  48879449 gttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 48879388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 3778144 - 3777984
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| |||||||||| ||||||||  | |||| |  ||||||| ||||||  || ||  || || ||||  ||||| || || ||| |||||||||||    
T  3778144 acacttattaagaaaaccaaaacatagtagtttgcaacatagtttattgtgttatccttgaaataatttttccaggaaaatataaaaataattttcattg 3778045  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
       ||||||||| || |||||||||||||||| |||||||||| | ||| |||||||||||    
T  3778044 atcattggttattgagaaaatgaaagagaaagcaaattgaatgcacttttcatttaatttt 3777984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 35084052 - 35084215
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtg-tattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    ||||||||  |||||||||||||||| |  ||||||   |||||||||||||| | ||||| | || |||||| |||  |||||||| |||||||| | |    
T  35084052 tcacacttaataagaaaactaaaacacagtaatttgagttatagttttttgtgttcttcttga-aataagtttcataaaaagatgtaaaaacaattctta 35084150  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    |||| || || ||||||| |||||||||  || |  ||||| |||| ||||||||||||||||||    
T  35084151 ttggataatgattatggagaaaatgaaaaggagaacaaattcaatgcaatttgcatttaatttta 35084215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 237
Target Start/End: Original strand, 21654116 - 21654235
Alignment:
Q  118 ttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaat 217  Q
    ||||||||||  || || ||| |||||| || | |||||||| ||| |||| ||||||| ||    ||||||| |||||||||  || |  |||||||||    
T  21654116 ttttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcattggttaaaaattatggagaaaatgaaaaggagaacaaattgaat 21654215  T
Q  218 gtaatttgcatttaatttta 237  Q
    ||||||||||||||||||||    
T  21654216 gtaatttgcatttaatttta 21654235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 235
Target Start/End: Complemental strand, 22369384 - 22369233
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||| ||   | |||| |||||||||||||||||  || |||||| |||||          ||||| ||| |||||| ||    
T  22369384 tcacacttattaagaaaactaaaatattgtagtttgtagtatagttttttgtgttatccttagaataagtt----------atgtaaaaataatttttat 22369295  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    ||| |||| ||||| || ||||||||||||| || | | |||||| || |||||||||||||    
T  22369294 tggttattagttatagacaaaatgaaagagagagcataatgaatgcaaattgcatttaattt 22369233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 237
Target Start/End: Complemental strand, 40560543 - 40560382
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| |||| |||||||| || ||| ||||||  ||||| ||||||||||  || ||  || ||||||||||| |||||||| ||| |||| ||||||    
T  40560543 acacttattaaaaaaactaacacttaataatttgaggtataattttttgtgttctccttgaaataagttttatagaaagatgtaaaaataattctcattg 40560444  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    | ||    ||||||| ||||| |||  || |  ||||| |||| || |||||||||||||||    
T  40560443 gttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaatttta 40560382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 10248630 - 10248594
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattgg 176  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  10248630 aagttttatagaaagatgtaaaaacaattttcattgg 10248594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 41890328 - 41890356
Alignment:
Q  209 aaattgaatgtaatttgcatttaatttta 237  Q
    |||||||||||||||||||||||||||||    
T  41890328 aaattgaatgtaatttgcatttaatttta 41890356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 4e-82; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 20281757 - 20281579
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  20281757 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 20281658  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20281657 tggctattggttatggaaaaaatgaaagaaaaagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 20281579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 39078322 - 39078129
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||| |||||||||||||    
T  39078322 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatag-aagatgtaaaaacaattttcat 39078224  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||    
T  39078223 tggctattagttattgaaaaaatgaaagagaaagaaaattgaatgtaatgtgcatttaattttatgagaataaacaaaagtttttcttggaaaag 39078129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 74 - 263
Target Start/End: Complemental strand, 4058881 - 4058692
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||    
T  4058881 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 4058782  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  4058781 tggttattggttatggaaaaaatgaaagagagagaaaattgaatgaaatttgcatttaattttatgagaataaataaaagtttttcttgg 4058692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 74 - 263
Target Start/End: Complemental strand, 29203672 - 29203483
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||  |||   ||||||||||||||||| |||||||||||||    
T  29203672 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgcaaatttttttataggaagatgtaaaaacaattttcat 29203573  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29203572 tggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttgg 29203483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 47868045 - 47867873
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  47868045 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 47867946  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  47867945 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 47867873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 2229413 - 2229241
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||    
T  2229413 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 2229314  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  2229313 tggctattggttatggaaaaaatgaaagaaaaagaaaattgaatgtaatttgcatttaatattatgagaataa 2229241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 20716346 - 20716152
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||  | || ||| ||||||||||||||| |||||||| |||||||||||||    
T  20716346 tcacacttattaagaaaactaaaacataagaatttggagtatagtcttttgacttttgtttggaaaaagttttatagaaagatgtaaaaacaattttcat 20716247  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||    
T  20716246 tggctattggttatggaaaaaatgaaagagtgagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagttttttttggaaaag 20716152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 26916491 - 26916313
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||  ||||||||||||||||||||||| |||||||||| ||    
T  26916491 tcacacttattaagaaaactaaaacataagaatttggagtatggttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttat 26916392  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  26916391 tggctattggttatggaaaaaatgaaagaaaaataaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 26916313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 10069863 - 10069669
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||||||||| | |||||   |||||||||||||| |||||||| |||||||||||||    
T  10069863 tcacacttattaataaaactaaaacataagaatttgtagtatagttttttgtattttcttcgaaaaaagttttatagaaagatgtaaaaacaattttcat 10069764  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  10069763 tggctattggttatggaaaaagtgaaagaaaaggaaaattgaatgttatttgcatttaattttatgagaataaacaaaagtttttcttgggaaag 10069669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 14332926 - 14332748
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||    
T  14332926 tcacacttattaagaaaactaaaacataagaatttggaatatggttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 14332827  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  14332826 tggccattggttatgaaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 14332748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 41414597 - 41414774
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||| ||    
T  41414597 tcacacttattaagaaaactaaaacataagaatatggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttat 41414696  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||| |||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  41414697 tggctattgattat-gaaaaaatgaaagagagaaaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 41414774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 74 - 263
Target Start/End: Original strand, 5483264 - 5483453
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||||||||||||||||||||||||||| |||||| |||||| |||||||||| ||||||| || |||||| ||||||||||||| |||||||||||||    
T  5483264 tcacacttgttaagaaaactaaaacataaaaatttgaagtataattttttgtgttttctttaaaataagtttaataggaagatgtaaaaacaattttcat 5483363  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    |||||| |||||||||| |||||| |||||| ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  5483364 tggctactggttatggagaaaatggaagagagagaaaattgaatgtaatatgcatttaatttcatgagaataaacaaaagtttttcttgg 5483453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 28668987 - 28669164
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| |||||||||||| ||||| |||||||||||||    
T  28668987 tcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttagaaaaggttttataggaaaatgtaaaaacaattttcat 28669086  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||| |||| ||||| |||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||    
T  28669087 tggttattagttat-gaaaaaatgaaagagagagaaaattgaatgtaatttgtatttaattttatgagaataaacaaaa 28669164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 74 - 263
Target Start/End: Complemental strand, 55580836 - 55580646
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||||||||    
T  55580836 tcacatttattaagaaaactgaaacataagaatttggagtatagttttttttgttttctttggaaaaagttgtataggaagatgtaaaaacaattttcat 55580737  T
Q  174 tggctattggttatggaa-aaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    |||||||| ||||||||| ||||||||||| | ||||| || |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  55580736 tggctattagttatggaaaaaaatgaaagaaagagaaattttaatgtaatttgcatttaattttatgagaataaacaaaagttttttttgg 55580646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 76 - 252
Target Start/End: Original strand, 56318058 - 56318234
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| |||| |||| |||||||||||||||| |||||| ||||||||||| |||||| ||||||| |||||||||||||||| ||||||||||||||     
T  56318058 acacttattaaaaaaattaaaacataagaatttagagtatggttttttgtgttttctttggaaaaaggtttataggaagatgtaaaaacaattttcatta 56318157  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| | |||||||||||    
T  56318158 gctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttacatttaattttatgataataaacaaaa 56318234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 83 - 258
Target Start/End: Original strand, 35310737 - 35310912
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    ||||||||||||||||||||||||||| || |||||||||||||| |||||||||| |||||| || | |||||||| ||||||||||||||||||||||    
T  35310737 ttaagaaaactaaaacataagaatttgtagcatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaattttcattggctattg 35310836  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    ||||||||||||||| |||||| |||||||| ||||||||||| ||||||||| || |||||||||||||||||||    
T  35310837 gttatggaaaaaatggaagagagagaaaattaaatgtaatttgtatttaatttcatgagaataaacaaaagttttt 35310912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 74 - 258
Target Start/End: Original strand, 17794527 - 17794711
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||| | ||||||||| |||||||||||||| || ||||||  || || ||||||||||||||||| |||||||||||||    
T  17794527 tcacacttattaagaaaactaaaaaaaaagaatttgaagtatagttttttgcgttttctttgaaataaattttataggaagatgtaaaaacaattttcat 17794626  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    ||||||||| ||||||||||| || |||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  17794627 tggctattgattatggaaaaattggaagagagagaaaattgaatgtaatttacatttaattttatgagaataaacaaaagttttt 17794711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 74 - 224
Target Start/End: Complemental strand, 7654783 - 7654633
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||| || |||||||||||||    
T  7654783 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatataaaaacaattttcat 7654684  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaattt 224  Q
    ||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  7654683 tggctattgattatggaaaaaatgaaagaaagagaaaattgaatgtaattt 7654633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 83 - 224
Target Start/End: Original strand, 16604841 - 16604982
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||||||||||  |||||||||||||||||||||     
T  16604841 ttaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgttaaaacaattttcattggctatta 16604940  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaattt 224  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  16604941 gttatggaaaaaatgaaagagagagaaaattgaatgtaattt 16604982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 74 - 238
Target Start/End: Complemental strand, 24940531 - 24940367
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||||||||||||||| |||||||||||||||||||||||||| | |||||| |||||||||||||| ||||||||| ||||||||||| |    
T  24940531 tcacatttattaagaaaactaaaacgtaagaatttggagtatagttttttgtattttctttggaaaaagttttataagaagatgtaaaaacaattttcgt 24940432  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttat 238  Q
    ||| ||||||||||||| ||||||||||||| |||||||| |||||||||| |||||||||||||    
T  24940431 tggttattggttatggagaaaatgaaagagagagaaaattaaatgtaatttccatttaattttat 24940367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 75 - 263
Target Start/End: Complemental strand, 42915695 - 42915506
Alignment:
Q  75 cacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcatt 174  Q
    ||||||| |||| |||||||||| ||||||||||| || |||||||||||||| |||||| ||| |||||| || | |||||||| ||||||||||||||    
T  42915695 cacacttattaaaaaaactaaaatataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaagatgtaaaaacaattttcatt 42915596  T
Q  175 ggctattggttatggaa-aaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    ||| ||||||||||||| ||||| ||||||| |||||||| ||||||||||||||||||||| || |||||||  |||||||||| ||||    
T  42915595 ggcaattggttatggaaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataagaaaaagtttttattgg 42915506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 76 - 268
Target Start/End: Original strand, 52535585 - 52535765
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||         ||||||||||| |||||||  |||   || ||| |||||||||||    
T  52535585 acacttattaagaaaactaaagcataagaatttggagtatagtttt---------ctttagaaaaatttttatataaag---taaaaataattttcattg 52535672  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  52535673 gctattggttatagaaaaagtgaaagagagagaaaattgaatataatttgcatttaattttatgagaataaacaaaagtttttcttggaaaag 52535765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 74 - 253
Target Start/End: Original strand, 1585335 - 1585512
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||||||||||||| |||||||||||| ||||||||||| ||||  |||| ||||||  || |||||| || | |||||||  |||||||||| ||    
T  1585335 tcacacttgttaagaaaagtaaaacataagattttggagtataatttt--gtgttttctttgaaataagtttcatggaaagatgttaaaacaatttttat 1585432  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaag 253  Q
    ||||||||| ||||||| |||||| |||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  1585433 tggctattgattatggagaaaatggaagagagagaaaattgaatgtaattttcatttaattttatgagaataaacaaaag 1585512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 48793616 - 48793806
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||| |||||||||||| || ||||||||  |||| |||||| ||| |||||| || |||||||||| |||||||||||||    
T  48793616 tcacacttattaagaaaactaaagcataagaatttgtagcatagtttt--gtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 48793713  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||| |||||||||| ||||||| ||||||  |||||||| ||||||||||||||||||||| || |||||||  |||||||||| |||| ||||    
T  48793714 tggcaattggttatgaaaaaaataaaagag--agaaaattaaatgtaatttgcatttaatttcatgagaataagaaaaagtttttattggaaaag 48793806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 8683292 - 8683462
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| ||||||||| |||||||||||| || |||||||||||||| |||||| ||| |||||| || | || ||||| ||| |||||||||    
T  8683292 tcacacttattaaaaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaatatgtaaaaataattttcat 8683391  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    |||| |||||||||||||||||| ||||||  |||||||| ||||||||||| ||||||||| || |||||||    
T  8683392 tggcaattggttatggaaaaaataaaagag--agaaaattaaatgtaatttgtatttaatttcatgagaataa 8683462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 152 - 268
Target Start/End: Complemental strand, 35529760 - 35529644
Alignment:
Q  152 aagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaa 251  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| || |||||||||    
T  35529760 aagatgtaaaaacaattttcattgggtattggttatggaaaaaatgaaagagagataaaattgaaagtaatttgcatttaattttatgagcataaacaaa 35529661  T
Q  252 agtttttcttgggaaag 268  Q
    | |||||||||| ||||    
T  35529660 actttttcttggaaaag 35529644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 262
Target Start/End: Original strand, 32323254 - 32323435
Alignment:
Q  80 ttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggcta 179  Q
    |||||||||||| |||||  ||| |||||| ||||| ||||||||||| ||||||| || ||| ||||| |||||||||| ||||||||||||||| |      
T  32323254 ttgttaagaaaattaaaatttaaaaatttgaagtattgttttttgtgttttctttaaaataagatttatgggaagatgtaaaaacaattttcattgacgc 32323353  T
Q  180 ttggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    ||| |||| || |||||| |||||| ||||||||||| ||||||| |||||||||| || | ||||| |||||||||||||||    
T  32323354 ttgattattgagaaaatggaagagagagaaaattgaa-gtaatttacatttaatttcatgataataagcaaaagtttttcttg 32323435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 74 - 260
Target Start/End: Complemental strand, 19352018 - 19351826
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaat-ttggagtatagtttttt---gtgtattctttagaaaaagttttataggaagatgt-agaaacaatt 168  Q
    |||||||| |||||||||||||||||||| ||  |||||||||||||||||   |||| ||| ||  || |||||| || ||||||||| | ||||||||    
T  19352018 tcacacttattaagaaaactaaaacataaaaaaattggagtatagtttttttgtgtgttttcattgaaataagtttcatgggaagatgttaaaaacaatt 19351919  T
Q  169 ttcattggctattggttatggaaaaaatgaaagagaaagaaaa-ttgaatgtaatttgcatttaattttataagaataaacaaaagtttttct 260  Q
    ||||||||||||| |||||| ||| |||| || ||| |||||| |||||||||||||||||||||||| || | ||||| |||||||||||||    
T  19351918 ttcattggctattagttatgaaaacaatggaatagagagaaaaattgaatgtaatttgcatttaatttcatcaaaataagcaaaagtttttct 19351826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 50080442 - 50080615
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||||||| |||||| | | ||     || |||| || || || ||||||| ||    
T  50080442 tcacacttattaagaaaactaaaacataagaattttgagtataattttttgtgttttcttttgtataa-----atgggaaaatataaaaccaatttttat 50080536  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||| ||||||| |||||| ||||||  ||||||||||||||||||||||||||||| ||  |||||| |||||    
T  50080537 tggctattgattatggataaaatggaagagagtgaaaattgaatgtaatttgcatttaatttcatgcgaataagcaaaa 50080615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 16473912 - 16473829
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgta 159  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  16473912 acacttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgta 16473829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 50145865 - 50145715
Alignment:
Q  110 gagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaa 209  Q
    ||||||| || ||||||| |||||| ||| ||||||||| |||||||||| | |||||||||||||||||||| | ||||| |||||| ||||||  |||    
T  50145865 gagtataattgtttgtgt-ttctttggaataagttttatgggaagatgtaaacacaattttcattggctattgataatggagaaaatggaagagagggaa 50145767  T
Q  210 aattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
    |||| |||||||||  |||||||||| || | |||| |||||||||||||||    
T  50145766 aattaaatgtaattaacatttaatttcatgaaaatatacaaaagtttttctt 50145715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 5815598 - 5815474
Alignment:
Q  111 agtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaa 210  Q
    ||||||||||||||||| ||||||  || |||||||||  ||||||||| ||| |||||| |||| |||||| |||||||||||| | |||||| |||||    
T  5815598 agtatagttttttgtgttttctttgaaataagttttatgagaagatgtaaaaataatttttattgactattgattatggaaaaaaaggaagagagagaaa 5815499  T
Q  211 attgaatgtaatttgcatttaattt 235  Q
    |||||||||||||  ||||||||||    
T  5815498 attgaatgtaattgacatttaattt 5815474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 12002619 - 12002799
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtg-------tattctttagaaaaagttttataggaagatgtagaaacaa 166  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||       | || ||| |||  ||||| || | |||||||| ||||||    
T  12002619 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttttttttttttttggaattagtttcatggaaagatgtaaaaacaa 12002718  T
Q  167 ttttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||| |||||| |||||||||||| ||| || |||||     | ||||||||||||||||||||||||| || | ||||| |||||    
T  12002719 tttttattggccattggttatggagaaactggaagag-----atattgaatgtaatttgcatttaatttcatgaaaataagcaaaa 12002799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 100 - 261
Target Start/End: Complemental strand, 31280329 - 31280178
Alignment:
Q  100 taagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaa 199  Q
    ||||||||| |||||||||||||||||| |||||| ||| ||||||||||      |||| ||| |||||||||||||||||| ||||||| ||| || |    
T  31280329 taagaatttagagtatagttttttgtgttttctttggaataagttttata------tgtaaaaataattttcattggctattg-ttatggagaaa-tgga 31280238  T
Q  200 agagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
    |||||  |||||||||||| | |||| ||||||||| || ||||||||||||||||||||||    
T  31280237 agaga--gaaaattgaatgcagtttgtatttaatttcattagaataaacaaaagtttttctt 31280178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 5064641 - 5064803
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||  |||||| |  ||| ||||||||||  |||||  || |||||||| ||||||||||| |||||||||||||    
T  5064641 tcacacttattaagaaaactaaaacatagtaatttgtaacataattttttgtgttatctttgaaataagttttaaaggaagatgtaaaaacaattttcat 5064740  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    | |   ||| |||| || ||||||||| ||| || |||||||||| | |||||||||||||||    
T  5064741 tagtagttgattatagagaaaatgaaaaagagagtaaattgaatgcactttgcatttaatttt 5064803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 46070518 - 46070668
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||||||||||||||||||  | |||| |  ||||||||| ||||  |||||  || |||||||||||||||||||| |||||||||||||||| | |||    
T  46070518 ttaagaaaactaaaacatagtagtttgtaacatagttttt-gtgttgtctttgaaataagttttataggaagatgtaaaaacaattttcattggttgttg 46070616  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||||| || ||||||||||||  || |||||||||| | |||||||||||||||    
T  46070617 gttattgagaaaatgaaagag--agtaaattgaatgcactttgcatttaatttt 46070668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 74 - 182
Target Start/End: Original strand, 21722668 - 21722776
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| |||||||||||||||||||||  |||||||| |||| ||| ||||||  || |||||||||||||||||||| ||| |||||||||    
T  21722668 tcacacttattaataaaactaaaacataagaattttaagtatagtgttttatgttttctttgtaataagttttataggaagatgtaaaaataattttcat 21722767  T
Q  174 tggctattg 182  Q
    || ||||||    
T  21722768 tgactattg 21722776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 25297286 - 25297386
Alignment:
Q  152 aagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaa 251  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||  ||||||  |||||||||||||||||| |||||||||| || ||||||| ||||    
T  25297286 aagatgtaaaaacaattttcattggctattgattatggagaaaatagaagagatggaaaattgaatgtaatttacatttaatttcatgagaataagcaaa 25297385  T
Q  252 a 252  Q
    |    
T  25297386 a 25297386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 14583895 - 14583717
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtatt-ctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    ||||| || ||||||||||||||| ||||||||||    ||||||| ||||||| || ||||| || |||||| || |||||||||| ||||| ||||||    
T  14583895 tcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttttctttaaaataagtttcatgggaagatgtaaaaaca-ttttca 14583797  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||| | |||   | |||||| ||||||  || |||||||||||||||||||||||||| || ||||||| |||||    
T  14583796 ttggctatggattaaaaagaaaatggaagagagtgataattgaatgtaatttgcatttaatttcatgagaataagcaaaa 14583717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 32203379 - 32203226
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||  |||| |||||||||||||||||||||  |||||||||||||||   ||||||  || ||||||||| ||||||| || ||||||||||||     
T  32203379 tcacactaattaaaaaaactaaaacataagaatttaaagtatagttttttgttgtttctttgaaataagttttatgggaagatataaaaacaattttca- 32203281  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatt 234  Q
          ||||||||| ||||||||||| | | |||||||||||||||| || |||||||||    
T  32203280 ------ttggttatgaaaaaaatgaaacatagagaaaattgaatgtaaattacatttaatt 32203226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 5841834 - 5841927
Alignment:
Q  143 ttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||| |||||||||||||||| || ||||||| || | |||||||| ||||||    
T  5841834 ttttataggaagatgtaaaaataattttcattggttattggttattgaaaaaatgaaagagagagcaaattgattgcactttgcattgaatttt 5841927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 47516190 - 47516339
Alignment:
Q  87 gaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggtta 186  Q
    ||||| |||||||||  | |||| | |||||||||||||||  |||||  || |||||||||||||||| ||| |||||||||||||||| | |||||||    
T  47516190 gaaaagtaaaacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttataggaagaagtaaaaacaattttcattggttgttggtta 47516289  T
Q  187 tggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    | || ||||||||||||| || ||||  |||| | |||| ||||||||||    
T  47516290 ttgagaaaatgaaagagagagcaaatcaaatgcactttgtatttaatttt 47516339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 8178291 - 8178387
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||| ||||||||| |||||||||  ||||| |||||||||| || ||||||||||||| || |||||||||| | |||||||||||||||    
T  8178291 aagttttataagaagatgtaaaaacaatttgtattggttattggttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 8178387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 17186822 - 17186909
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaaga 202  Q
    |||||||||||| | |||||| ||||   ||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||    
T  17186822 atagttttttgtattttcttt-gaaatttttttataggaagatgtaaaaataagtttcattggctattggttatggaaaaaatgaaaga 17186909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 17799129 - 17799277
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    ||||||||||||||| || | ||||||||||||| ||| | ||||  |  || |||  |||||||| |||||||||| |||||||||||||||| ||||     
T  17799129 ttaagaaaactaaaatatgataatttggagtataatttctggtgttcttcttggaattagttttatgggaagatgtaaaaacaattttcattggttattt 17799228  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcattta 231  Q
    |||||||| ||||||| || || |  ||||| |||| ||||||||||||    
T  17799229 gttatggagaaaatgagagggagaacaaattaaatgcaatttgcattta 17799277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 236
Target Start/End: Original strand, 23978169 - 23978263
Alignment:
Q  142 gttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||||||| ||||||||||||||||   ||| |||| || ||||||||| ||| || |||||||||| | |||||||||||||||    
T  23978169 gttttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 23978263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 28142608 - 28142769
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||| || | | |||| |  ||| ||||||||||  |||||| || ||||||||||||| |||||| |||||||||||||    
T  28142608 tcacacttattaagaaaactaaaatatgatagtttgtaacataattttttgtgttatctttaaaataagttttataggaggatgtaaaaacaattttcat 28142707  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||   ||| |||| || ||||||||| ||| || ||||| ||||   |||||||||||||||    
T  28142708 tggtagttgattatagagaaaatgaaaaagagagcaaattaaatg-cttttgcatttaatttt 28142769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 32280009 - 32280111
Alignment:
Q  94 aaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaa 193  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| | |||| ||    | ||||| |||||||||| ||||||||||| ||||||| ||    
T  32280009 aaaacataagaatttggagtataattttttgtgttttctttagaataggtttgatgaagatatgtaaaaacaattttaattggctattgattatggagaa 32280108  T
Q  194 aat 196  Q
    |||    
T  32280109 aat 32280111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 235
Target Start/End: Complemental strand, 40553929 - 40553774
Alignment:
Q  84 taagaaaactaaaacataagaatttggagtatagtttttt----gtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggcta 179  Q
    ||||||||||||||||||  | |||| |||||||||| ||    ||||  || |||||| |||||| |||| |||||||| |||||| ||||||||| ||    
T  40553929 taagaaaactaaaacatagtagtttgcagtatagtttctttcttgtgttatccttagaataagtttcatagaaagatgtaaaaacaagtttcattggtta 40553830  T
Q  180 ttggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    || |||||||| ||| |||||  || || ||| |||||| ||||||||||||||||    
T  40553829 ttagttatggagaaagtgaaaaggagagtaaaatgaatgcaatttgcatttaattt 40553774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 37912010 - 37911888
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaatt 213  Q
    ||||||||||||||  |||||| || ||||||||||| || ||||| ||||||||||||||||   ||| |||| || ||||| ||| ||| || |||||    
T  37912010 atagttttttgtgttatctttaaaataagttttatagaaatatgtaaaaacaattttcattggtagttgattatagagaaaataaaaaagagagcaaatt 37911911  T
Q  214 gaatgtaatttgcatttaatttt 236  Q
     |||| | |||||||||||||||    
T  37911910 caatgcactttgcatttaatttt 37911888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 29511551 - 29511490
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    ||||||||||||||  |||||| || |||||||||||||||||||| |||||||||||||||    
T  29511551 atagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcattg 29511490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 53848626 - 53848471
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||| ||||||||  | |||| |  ||||||| ||||||  || ||  || || ||||||||||||| ||| |||||||||| ||    
T  53848626 tcacacttattaagaaaacaaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataatttttataggaagacgtaaaaacaattttaat 53848527  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||| |||||       |||||||||||||||||| |||||||||| | |||||||||| ||||    
T  53848526 tggttattg-------aaaaaatgaaagagaaagcaaattgaatgcactttgcatttattttt 53848471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 32410494 - 32410332
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||| ||||||  | |||  | || ||||||||||||  |||||  || |||||||||||||||||||| ||| |||||||||    
T  32410494 tcacacttattaagaaaactacaacatagtagtttataataaagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcat 32410395  T
Q  174 tggcta-ttggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    | |||| ||  |||| || ||||| ||| ||| || |||||||||  | |||||||||||||||    
T  32410394 t-gctagttaattatagagaaaataaaaaagagagcaaattgaatacactttgcatttaatttt 32410332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 8013075 - 8013237
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||||||||||||||||||  | |||| |  ||||||| ||||||  || ||  || |||||| |||| |||||||| |||||||||| ||    
T  8013075 tcacatttattaagaaaactaaaacatagtagtttgtaacatagtttcttgtgttatccttgaaataagtttcatagaaagatgtaaaaacaatttttat 8013174  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||| |||| || || || ||||||||||||| |  | | |||||| || ||||||||||||||    
T  8013175 tggttattagtcatagagaaaatgaaagagagaacataatgaatgcaaattgcatttaatttt 8013237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 28318408 - 28318565
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| ||||||||||||||    |||| |  ||||||||||||||  |||||  || ||  |||||||||||||||| |||||||||||||    
T  28318408 tcacacttattaacaaaactaaaacatag---tttgtaacatagttttttgtgttatctttgaaataa--tttataggaagatgtaaaaacaattttcat 28318502  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||   ||| |||| || ||||||||| ||  || |||||||||| | ||| |||||||||||    
T  28318503 tggtagttgattatagagaaaatgaaaaagctagtaaattgaatgcattttacatttaatttt 28318565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 7438805 - 7438761
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgt 127  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  7438805 ttaagaaaactaaaacataataatttggagtatagtttttggtgt 7438761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 21722784 - 21722836
Alignment:
Q  206 agaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    |||||||| ||||||||||| ||||||||| || |||||||||||||||||||    
T  21722784 agaaaattaaatgtaatttgtatttaatttcatgagaataaacaaaagttttt 21722836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 30011913 - 30012074
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||  ||||| ||   ||||||  ||||| ||||||||||  | ||| ||| |||||| || | |||||||| |||||||| ||||    
T  30011913 tcacacttattaagaaagttaaaatattgtaatttgaggtataattttttgtgttatttttggaataagtttcatggaaagatgtaaaaacaattatcat 30012012  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    ||| || |  ||||||| ||||| ||| ||||   |||||||||| ||||||||||||||||||    
T  30012013 tggttaattattatggagaaaataaaaaagaac--aaattgaatgcaatttgcatttaatttta 30012074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 49080357 - 49080261
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||||||||| ||||||||||||||||   ||| |||  |  ||||||||| ||| |  |||||||||| | |||||||||||||||    
T  49080357 aagttttataggaagatgtaaaaacaattttcattggtagttgattacagggaaaatgaaaaagagatcaaattgaatgcactttgcatttaatttt 49080261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 40411199 - 40411104
Alignment:
Q  142 gttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    |||||||||||||||||| |||||||||| |||||   ||| |||  || ||||||||| ||| |  |||||||||| | ||| ||||||||||||    
T  40411199 gttttataggaagatgtaaaaacaatttttattggtagttgattacagagaaaatgaaaaagagatcaaattgaatgcagtttacatttaatttta 40411104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 32280105 - 32280151
Alignment:
Q  206 agaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||||||||||||||||||||| ||| || ||||||| |||||    
T  32280105 agaaaattgaatgtaatttgcatttagtttcatgagaataagcaaaa 32280151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 33
Target Start/End: Original strand, 13998921 - 13998950
Alignment:
Q  4 aatgtctaccatttatttttaagagacata 33  Q
    ||||||||||||||||||||||||||||||    
T  13998921 aatgtctaccatttatttttaagagacata 13998950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 33
Target Start/End: Original strand, 22747938 - 22747967
Alignment:
Q  4 aatgtctaccatttatttttaagagacata 33  Q
    ||||||||||||||||||||||||||||||    
T  22747938 aatgtctaccatttatttttaagagacata 22747967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 38140698 - 38140751
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgt 127  Q
    |||||||| |||||||||||||| ||| | ||||| ||||||||||| ||||||    
T  38140698 tcacacttattaagaaaactaaagcatgataattttgagtatagtttcttgtgt 38140751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 31532448 - 31532488
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagtttttt 123  Q
    |||||||||||||||||| | ||||| ||||||||||||||    
T  31532448 ttaagaaaactaaaacattacaatttagagtatagtttttt 31532488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 1e-81; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 74 - 263
Target Start/End: Complemental strand, 20644182 - 20643993
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  20644182 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 20644083  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  20644082 tggctattggttatggaaaaaatgaaagagagggaaaattgaatgtaatttgcatttaatttcatgagaataaacaaaagtttttcttgg 20643993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 43589955 - 43590127
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||| |||||||||||||    
T  43589955 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttgaaaaagttttatagggagatgtaaaaacaattttcat 43590054  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  43590055 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 43590127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 42273815 - 42273639
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| |||||||||||||    
T  42273815 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcat 42273716  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  42273715 tggctattggttatggagaaaatgaaagag--agaaaattgaatgcaatttgcatttaattttatgagaataaacaaaa 42273639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 6686553 - 6686380
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaa-gttttataggaagatgtagaaacaattttca 172  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||| ||||||||||||    
T  6686553 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatgtaaaaacaattttca 6686454  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  6686453 ttggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 6686380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 74 - 263
Target Start/End: Complemental strand, 20039270 - 20039081
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||  |||| |||||||||||||||||| || ||||||| ||    
T  20039270 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaggttttataggaagatgtaaaaccaatttttat 20039171  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  20039170 tggctattggttatgaaaaaaatgaaagagatagaaaattaaatgtaatttgcatttaattttatgagaattaacaaaagtttttcttgg 20039081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 75 - 262
Target Start/End: Complemental strand, 34425497 - 34425311
Alignment:
Q  75 cacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcatt 174  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||| ||||| ||||||||||||||    
T  34425497 cacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttataggaatatgtaaaaacaattttcatt 34425398  T
Q  175 ggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    |||||||| ||||||| ||||| ||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  34425397 ggctattgattatgga-aaaataaaagagagagaaaattgaatataatttgcatttaattttatgagaataaacaaaagtttttcttg 34425311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 37562754 - 37562933
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttag-aaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| | ||||||||||||||||||||||| ||||||||||||    
T  37562754 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttttttttggaaaaagttttataggaagatgtaaaaacaattttca 37562853  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    || ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  37562854 ttagctattgtttatggaaaaaatgaaagacagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 37562933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 83 - 261
Target Start/End: Original strand, 38130115 - 38130296
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagt---tttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggcta 179  Q
    ||||||||||||||||||||||||||||| ||||||   ||||||||| ||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  38130115 ttaagaaaactaaaacataagaatttggaatatagtagttttttgtgttttctttagaaaaagttttataggaatatgtaaaaataattttcattggcta 38130214  T
Q  180 ttggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  38130215 ttggttatggaaaaaatgaaagagagagaaaattgaatgtaatctacatttaattttatgagaataaacaaaagtttttctt 38130296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 11261877 - 11262055
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||| ||||||| |||| ||||||||||||||| |||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||    
T  11261877 tcacacttattaagtaaactaacacatgagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 11261976  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  11261977 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 11262055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 84 - 252
Target Start/End: Original strand, 37522592 - 37522761
Alignment:
Q  84 taagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattgg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||||||     
T  37522592 taagaaaactaaaacataagaatttggagtatagttttttgtgttttttttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgt 37522691  T
Q  184 ttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaa-ttttataagaataaacaaaa 252  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||| ||||||    
T  37522692 ttatggaaaaaatgaaagacagagaaaattgaatgtaatttgcatttaatttttatgagaatagacaaaa 37522761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 96 - 268
Target Start/End: Complemental strand, 8225608 - 8225437
Alignment:
Q  96 aacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaat-tttcattggctattggttatggaaaaa 194  Q
    |||| ||||||||||| ||||||||||||| | |||||| |||||||||||||||||| ||||| ||| ||  |||||||||||||||||||||||||||    
T  8225608 aacaaaagaatttggactatagttttttgtattttctttggaaaaagttttataggaaaatgtaaaaaaaaaatttcattggctattggttatggaaaaa 8225509  T
Q  195 atgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||  |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  8225508 atgaaagaga--gaaaattgaacgtaatttgcatttaattttatgagaataaacaaaagtttttcttggaaaag 8225437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 100 - 252
Target Start/End: Complemental strand, 32111144 - 32110992
Alignment:
Q  100 taagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaa 199  Q
    ||||||||||||||||| | |||||||| ||||||  ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||| |||||    
T  32111144 taagaatttggagtataatgttttgtgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcattgactattggttatggaaaatatgaa 32111045  T
Q  200 agagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||||||||    
T  32111044 agagagagaaaattaaatgtaatttgcatttaattttatgagaataaacaaaa 32110992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 25841032 - 25840838
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||| ||||| |||||| || |||||||||||||| |||||| ||| |||||| || |||||||||| |||||||||||||    
T  25841032 tcacacttattaagaaaactaaagcataaaaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 25840933  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    || | |||| ||||||||||||| ||||||| |||||||| ||||||||||||||||||||| || |||||||  |||||||||| |||| ||||    
T  25840932 tgacaattgtttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataagaaaaagtttttattggaaaag 25840838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 120 - 262
Target Start/End: Complemental strand, 38280969 - 38280827
Alignment:
Q  120 ttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgt 219  Q
    |||||||  ||||||  ||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |    
T  38280969 ttttgtgctttctttgaaaaaagttttataggaaaatgtaaaaacaattttcattggttattgattatggaaaaaatgaaagagagagaaaattgaatat 38280870  T
Q  220 aatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  38280869 aatttgcatttaattttatgagaataaacaaaagtttttcttg 38280827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 83 - 268
Target Start/End: Complemental strand, 19413300 - 19413115
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    ||||||||||||||  ||||||||||| || |||||||||||||| ||||||  || ||||||||| |||||||||| ||||||||||||||||| ||||    
T  19413300 ttaagaaaactaaagtataagaatttgtagcatagttttttgtgttttctttgaaataagttttatgggaagatgtaaaaacaattttcattggcaattg 19413201  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||||||||| |||||||  ||||||| ||||||||||||||||||||| || ||||||   |||||||||| |||| ||||    
T  19413200 gttatggaaaaaataaaagagagggaaaattaaatgtaatttgcatttaatttcatgagaatatgaaaaagtttttattggaaaag 19413115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 76 - 261
Target Start/End: Original strand, 43454318 - 43454503
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| ||||||||| ||||||||||||| ||| | ||||||||||||||| ||||||   | |||||||||||||| ||||| ||||||||||||||     
T  43454318 acacttattaagaaaattaaaacataagaacttgaaatatagttttttgtgttttctttgtcataagttttataggaatatgtaaaaacaattttcattt 43454417  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
     |||||||||| | | ||||| ||||||| ||||||||||||||||||| ||||||||| ||| ||| ||||||||||||||||||    
T  43454418 actattggttaagaagaaaataaaagagagagaaaattgaatgtaatttacatttaattctatgagattaaacaaaagtttttctt 43454503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 4463526 - 4463334
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||| |||||||||||| || || ||| |  |||| |||||| ||| ||| || || |||||||||| ||||||||||||     
T  4463526 tcacacttattaagaaaactaaagcataagaatttgtagcatggttgt--gtgttttctttggaataagcttcatgggaagatgtaaaaacaattttcac 4463429  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| || || |||| ||||||||||| |||| ||||    
T  4463428 tggctattggttatggaaaaaatgaaagagagagaaaattaaatgtaatttgcaattaatttcatgagtataagcaaaagtttttattggaaaag 4463334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 74 - 263
Target Start/End: Original strand, 9957428 - 9957598
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||               |||||||||| |||||||||||||    
T  9957428 tcacacttattaagaaaactaaaacatgagaatttggagtatagttttt-gtgttttcttt---------------ggaagatgtaaaaacaattttcat 9957511  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    ||||||||||||||| |||||||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9957512 tggctattggttatg-aaaaaatgaaagaga--gaaagttgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttgg 9957598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 39505225 - 39505419
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagtttttt-gtgtattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| |||| |||| ||||  ||||||||||| || |||||||||| |||| |||||| ||| ||||||||| | |||||||| ||||||||||||    
T  39505225 tcacacttattaaaaaaattaaagtataagaatttgtagcatagtttttttgtgttttctttggaataagttttatggtaagatgtaaaaacaattttca 39505324  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||| ||| ||||||| |||||| ||||||| |||||||| ||||||||||||||||||||| || |||||||  |||||||||| |||| ||||    
T  39505325 ttggcaattcgttatgg-aaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataagaaaaagtttttattggaaaag 39505419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 5984126 - 5984302
Alignment:
Q  99 ataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttc-------attggctattggttatggaa 191  Q
    |||||||||| |||||||||||||||||| |||||| ||| ||||||||||| || ||||| |||||||||||       ||||| |||||||||| ||     
T  5984126 ataagaatttagagtatagttttttgtgttttctttggaataagttttatagaaatatgtaaaaacaattttcattgactattggttattggttatagag 5984225  T
Q  192 aaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||| |||| ||| |||||||||| ||||||||||||| |||||||||||||||| ||||||| ||||    
T  5984226 aaaatgaaagagagagaatatttaatgtaatttacatttaattttatgagaataaacaaaagttgttcttggaaaag 5984302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 74 - 259
Target Start/End: Complemental strand, 17351556 - 17351371
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||||| || ||| || ||||||||||||||||| | | ||| || ||| ||||||||| | |||||||| |||||||||| ||    
T  17351556 tcacatttattaagaaaactaatacgtaaaaacttggagtatagttttttttattttcgttggaataagttttatggaaagatgtaaaaacaattttaat 17351457  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttc 259  Q
    ||||||||| ||||||| ||||||| | ||| ||||||||||||||||||| |||||||||| || ||||||| | ||||||||||    
T  17351456 tggctattgattatggagaaaatgacatagagagaaaattgaatgtaattttcatttaatttcatgagaataagctaaagtttttc 17351371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 135 - 252
Target Start/End: Complemental strand, 32017810 - 32017694
Alignment:
Q  135 agaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatt 234  Q
    |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||| |||| |||||||| ||||| |||||||||||||||||||||||    
T  32017810 agaaaacgttttataggaagatgtaaaaacaattttcattgtctattggttatgga-aaaacgaaagagagagaaagttgaatgtaatttgcatttaatt 32017712  T
Q  235 ttataagaataaacaaaa 252  Q
    |||| |||||||||||||    
T  32017711 ttatgagaataaacaaaa 32017694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 12912292 - 12912449
Alignment:
Q  78 acttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggc 177  Q
    |||| ||||||||||||||||||| | | ||||| |||||||||||||||  |||||  || |||||||||||||||||||| ||||||||||||||||     
T  12912292 acttattaagaaaactaaaacata-gtagttggaatatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattggt 12912390  T
Q  178 tattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||| | |||||||||||||||| || ||||| |||| | |||||||||||||||    
T  12912391 tattggttgttgaaaaaatgaaagagagagcaaattaaatgcactttgcatttaatttt 12912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 268
Target Start/End: Original strand, 41625517 - 41625697
Alignment:
Q  86 agaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggtt 185  Q
    |||||||||||||||||||||||  | ||||||||||||||| ||||||  || |||||| ||||||||||||| |||  ||||||||| ||||||| ||    
T  41625517 agaaaactaaaacataagaatttaaa-tatagttttttgtgttttctttgaaataagtttcataggaagatgtaaaaattattttcattcgctattgatt 41625615  T
Q  186 atggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    || ||||||||| ||||||  ||||||| ||||||||||| ||||||||| || | |||||||| |||||||| |||| ||||    
T  41625616 at-gaaaaaatggaagagagggaaaattaaatgtaatttgaatttaatttcatgaaaataaacataagtttttgttggaaaag 41625697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 93 - 263
Target Start/End: Original strand, 42104262 - 42104430
Alignment:
Q  93 taaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaa 192  Q
    |||||||||||||||||||||||| ||||  ||||  ||||| ||| |||||| || |||||||||| |||||||||||||||||||||  ||||||| |    
T  42104262 taaaacataagaatttggagtataatttt--gtgttctctttggaacaagtttcatgggaagatgtaaaaacaattttcattggctattaattatggaga 42104359  T
Q  193 aaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    ||||| |||||  | ||||||||||||| |||||||||||||| || ||  ||| |||||| |||||||||    
T  42104360 aaatggaagagtgataaaattgaatgtattttgcatttaatttcatgagtttaagcaaaaggttttcttgg 42104430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 104270 - 104403
Alignment:
Q  137 aaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaa--------agagaaagaaaattgaatgtaatttgcat 228  Q
    |||||||||||||| |||||||| |||||||||||||| |||||| |||||| ||||||||||        ||||| ||||||||||||||||| |||||    
T  104270 aaaaagttttatagaaagatgtaaaaacaattttcattagctattagttatgaaaaaaatgaaagagagagagagagagaaaattgaatgtaatatgcat 104369  T
Q  229 ttaattttataagaataaacaaaagtttttcttg 262  Q
    |||||||||| |||||| ||||||||||||||||    
T  104370 ttaattttatgagaatagacaaaagtttttcttg 104403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 204
Target Start/End: Original strand, 12792779 - 12792899
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| |||||||||||||||||| ||||||||||||||||||||| |||||         ||||||||||||| ||| | |||||||||||    
T  12792779 tcacacttattaaaaaaactaaaacataagaaattggagtatagttttttgtgttttctt---------ttttataggaaga-gtaaagacaattttcat 12792868  T
Q  174 tggctattggttatggaaaaaatgaaagaga 204  Q
    ||||||||||||||||| |||||||||||||    
T  12792869 tggctattggttatggagaaaatgaaagaga 12792899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 10153987 - 10154083
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||||||||| |||||||||||||||| ||||||| || || ||||||||||||| || |||||||||| | |||||||||||||||    
T  10153987 aagttttataggaagatgtaaaaacaattttcattggttattggtcattgagaaaatgaaagagatagcaaattgaatgcactttgcatttaatttt 10154083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 74 - 258
Target Start/End: Complemental strand, 23233579 - 23233383
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| || ||||| ||||||||||||||||||  |||||||||||||||| ||||||  ||| |  |||||||||| ||||| ||||| |||| ||    
T  23233579 tcacacttattgagaaatctaaaacataagaatttgacgtatagttttttgtgttttctttgaaaacaactttataggaatatgtaaaaacagtttttat 23233480  T
Q  174 tggctattggttatggaaaaaatgaaa------------gagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    |  |||||||||||||| |||||||||            |||| ||| | |||||||||||||||||||| |||||| ||||||||||| |||||||    
T  23233479 taactattggttatggagaaaatgaaagagagagagagagagagagagagttgaatgtaatttgcatttatttttatgagaataaacaagagttttt 23233383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 5369064 - 5369186
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaatt 213  Q
    ||||||||||||||  | |||| || |||||||||||||||||||| |||||||||||||||| | |||||||| || |||||||||||||  |   |||    
T  5369064 atagttttttgtgttatttttaaaataagttttataggaagatgtaaaaacaattttcattggttgttggttattgagaaaatgaaagagagggcttatt 5369163  T
Q  214 gaatgtaatttgcatttaatttt 236  Q
    ||||| | |||||||||||||||    
T  5369164 gaatgcactttgcatttaatttt 5369186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 204
Target Start/End: Original strand, 12729878 - 12729997
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| |||||||||||||||||| ||||||||||||||||||||| |||||         ||||||||||||| ||| | |||||||||||    
T  12729878 tcacacttattaa-aaaactaaaacataagaaattggagtatagttttttgtgttttctt---------ttttataggaaga-gtaaagacaattttcat 12729966  T
Q  174 tggctattggttatggaaaaaatgaaagaga 204  Q
    ||||||||||||||||| ||||||| |||||    
T  12729967 tggctattggttatggagaaaatgagagaga 12729997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 32019980 - 32019911
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttatagga 152  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| || ||||||||    
T  32019980 ttaagaaaactaaaacataagaatttggagtatagttttctgtgttttctttagaaaacgtcttatagga 32019911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 262
Target Start/End: Complemental strand, 7071342 - 7071218
Alignment:
Q  138 aaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    |||||||| || |||| ||||| ||| ||||||||||| |||||| ||| ||| |||||| |||||   ||||||||||||||||||| ||||||||| |    
T  7071342 aaaagtttcatgggaaaatgtaaaaataattttcattgactattgattacggagaaaatggaagagcgtgaaaattgaatgtaatttgtatttaatttca 7071243  T
Q  238 taagaataaacaaaagtttttcttg 262  Q
    | |||||||  ||||||||||||||    
T  7071242 tgagaataagtaaaagtttttcttg 7071218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 1238596 - 1238507
Alignment:
Q  172 attggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
    |||| ||||||||||| || ||||||   |||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||    
T  1238596 attgcctattggttatagagaaaatgggggagaaagaaaattgaatgtaatttgtttttaattttataagaataagtaaaagtttttctt 1238507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 11858402 - 11858295
Alignment:
Q  160 gaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttc 259  Q
    ||||||||||| ||||| ||||| ||||||| |||||| || ||| | ||||||||| |||||||| |||||| || || |||||||||||||||||||     
T  11858402 gaaacaatttttattggttattgattatggagaaaatggaaaagagaaaaaattgaacgtaatttgtatttaagttcatgagaataaacaaaagtttttt 11858303  T
Q  260 ttgggaaa 267  Q
    || |||||    
T  11858302 tttggaaa 11858295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 30893243 - 30893365
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||| | ||||||||||||||||| |||||| ||  ||||||  | |||||| | |||||||| ||| |||||| ||    
T  30893243 tcacacttattaagaaaactaaaacatgataatttggagtatagtttcttgtgtttttcttagaattaattttatggaaagatgtaaaaataatttttat 30893342  T
Q  174 tggctattggttatggaaaaaat 196  Q
    ||| |||| ||||| || |||||    
T  30893343 tggttatttgttatagataaaat 30893365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 12730099 - 12730151
Alignment:
Q  200 agagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  12730099 agagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 12730151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 236
Target Start/End: Original strand, 3463853 - 3463970
Alignment:
Q  119 tttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatg 218  Q
    |||||||||  |||||  || ||||||||||||||||| || |||||||||| |||||   ||| |||| || ||||||||| ||| || ||||||||||    
T  3463853 tttttgtgttatctttgaaataagttttataggaagatataaaaacaatttttattggtagttgattatagagaaaatgaaaaagagagcaaattgaatg 3463952  T
Q  219 taatttgcatttaatttt 236  Q
     | |||||||||||||||    
T  3463953 cactttgcatttaatttt 3463970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 8506597 - 8506443
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| |||||||||||||||||||  | |||| |  ||||||| || |||  || ||  || ||||||||||| |||||||| |||||||||||||||    
T  8506597 acacttattaagaaaactaaaacatagtagtttgcaacatagtttcttatgttatccttgaaataagttttatagaaagatgtaaaaacaattttcattg 8506498  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
          |||||| || ||||||||||| | || |||||||||| | |||||||||||||||    
T  8506497 ------ggttattgagaaaatgaaagatagagcaaattgaatgcactttgcatttaatttt 8506443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 29307221 - 29307282
Alignment:
Q  115 tagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattgg 176  Q
    |||||||||||||| |||||| || |||||||||||||||||||| ||| ||||||||||||    
T  29307221 tagttttttgtgtaatctttaaaataagttttataggaagatgtaaaaataattttcattgg 29307282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 236
Target Start/End: Original strand, 16153353 - 16153500
Alignment:
Q  88 aaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttat 187  Q
    ||||||||||||||| | |||| |  ||||||||||||||  |||||  || |||||||||||||||||||| |||| |||||||||||   ||| ||||    
T  16153353 aaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaac-attttcattggtagttgattat 16153451  T
Q  188 ggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
     || ||| ||||| ||| || ||||| |||| | |||| ||||||||||    
T  16153452 agagaaagtgaaaaagagagcaaattaaatgcactttgtatttaatttt 16153500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 237
Target Start/End: Complemental strand, 24439738 - 24439575
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgt-attctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| |||| |||  |||||||| | ||||||   |||| |||||||||| ||||||  ||| |||||| || | |||||||| |||||||| |||    
T  24439738 tcacacttattaaaaaagttaaaacattataatttgagatataattttttgtgttattcttg-gaataagtttcatggaaagatgtaaaaacaattatca 24439640  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    ||||||| |  ||||||||||||| |||  || |  |||||||||| ||||||||||||||||||    
T  24439639 ttggctaattattatggaaaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 24439575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 12792929 - 12792972
Alignment:
Q  209 aaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  12792929 aaattgaatgtaatttgcatttaattttatgagaataaacaaaa 12792972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 5736233 - 5736395
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| |||||||||  | |||| |  |||||||||| |||  |||||  || || |||||||||||| |||| |||||||||||||    
T  5736233 tcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttatgttatctttgaaataaattttataggaagttgtaaaaacaattttcat 5736332  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    | |   ||| |||  || |||||||||| || || |||||||| | | |||||||||||||||    
T  5736333 ttgtcgttgattacagagaaaatgaaagggagagcaaattgaacgcattttgcatttaatttt 5736395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 176
Target Start/End: Original strand, 1144493 - 1144586
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattgg 176  Q
    |||||||||||||| ||||  | |||| |  ||||||||||||||  |||||| || || ||||||||||| ||||| ||||||||||||||||    
T  1144493 ttaagaaaactaaaccatagtagtttgtaacatagttttttgtgttatctttaaaataaattttataggaatatgtaaaaacaattttcattgg 1144586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 6391997 - 6391876
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaatt 213  Q
    |||||||||||| |  |||||  || |||||| |||| |||||||| |||||| ||| ||||| |||| ||||| || |||||||||||||||| | | |    
T  6391997 atagttttttgtatcatctttgaaataagtttcatagaaagatgtaaaaacaacttttattggttattagttatagagaaaatgaaagagaaagtataat 6391898  T
Q  214 gaatgtaatttgcatttaattt 235  Q
     |||| |||||||| |||||||    
T  6391897 aaatgcaatttgcaattaattt 6391876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 8959767 - 8959646
Alignment:
Q  115 tagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattg 214  Q
    |||||||||||||  |||||  || |||||||||||||||||||| |||||||||||||||    ||| |||| || |||||| || ||| || ||||||    
T  8959767 tagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattgatagttgattatagagaaaatggaaaagagagcaaattg 8959668  T
Q  215 aatgtaatttgcatttaatttt 236  Q
    || | | ||| |||||||||||    
T  8959667 aacgcactttacatttaatttt 8959646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 5659584 - 5659676
Alignment:
Q  145 ttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatg-aaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||||||||||||||| |||||||||| |||||   ||| |||| ||||||||| ||| |||||| |||||||||| | ||| |||||||||||    
T  5659584 ttataggaagatgtaaaaacaatttttattggtagttgattatagaaaaaatgaaaaaagaaagcaaattgaatgcactttacatttaatttt 5659676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 235
Target Start/End: Complemental strand, 32079670 - 32079512
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| |||||||||||||||||| | |||||||| ||||||||||| |||  || ||  ||  ||||| || | |||||||| ||||||||||||| |    
T  32079670 acacttattaagaaaactaaaacattataatttggattatagttttttatgttctccttgaaattagtttaatggaaagatgtaaaaacaattttcatcg 32079571  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
      ||||  |||  || ||||||| || || || ||||| |||| ||||||||||||||||    
T  32079570 attatttattacagagaaaatgagagggagag-aaattaaatgcaatttgcatttaattt 32079512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 235
Target Start/End: Complemental strand, 8146860 - 8146730
Alignment:
Q  104 aatttggagtatagttttttgtgtattctt-tagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaaga 202  Q
    ||||||||||||||||| ||||||  |||| | ||| ||||||||| | || || || ||  |||||||||||| |||  |||||||| ||||||| ||     
T  8146860 aatttggagtatagtttcttgtgt--tcttctggaataagttttatggaaaaatttaaaataaattttcattggttatctgttatggagaaaatgagagg 8146763  T
Q  203 gaaagaaaattgaatgtaatttgcatttaattt 235  Q
    || || ||||| | |||||||||||||||||||    
T  8146762 gagagcaaattaattgtaatttgcatttaattt 8146730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 245
Target Start/End: Original strand, 15006289 - 15006458
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    ||||||||||||||||  |||| || | |||||  |||||| ||||||||||  | | ||||| || ||| ||  |||||||||  ||||||||| |||     
T  15006289 acacttgttaagaaaatcaaaatatcataatttaaagtataattttttgtgttctttatagaataaatttcatgagaagatgtaataacaattttgattt 15006388  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaata 245  Q
      |||||| ||| |||||  ||| |  || |  |||||||||| |||||| |||||||||||||||||||    
T  15006389 attattgggtatagaaaatttgataaggataacaaattgaatgcaatttgtatttaattttataagaata 15006458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 29493592 - 29493669
Alignment:
Q  161 aaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttat 238  Q
    |||||||||| ||||  ||||||||||||| |||||   |||||  | ||||||||| ||||||||||| ||||||||    
T  29493592 aaacaatttttattgattattggttatggagaaaataggagagagtgtaaattgaatataatttgcattcaattttat 29493669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 30703725 - 30703640
Alignment:
Q  118 ttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagag 203  Q
    ||||||||||  |||||  || || ||||||||||||||||| ||| || ||||||||| ||||| ||||  | ||||||||||||    
T  30703725 ttttttgtgttatctttgaaataaattttataggaagatgtataaaaaagtttcattggttattgattattcagaaaatgaaagag 30703640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 446000 - 446060
Alignment:
Q  192 aaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||| | ||||||||||| ||||| |||||||||| || | |||||| ||||    
T  446000 aaaatgaaagagagaaaaaattgaatgcaattttcatttaatttcatgataataaaaaaaa 446060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 17825326 - 17825354
Alignment:
Q  209 aaattgaatgtaatttgcatttaatttta 237  Q
    |||||||||||||||||||||||||||||    
T  17825326 aaattgaatgtaatttgcatttaatttta 17825354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 3e-79; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 75 - 268
Target Start/End: Complemental strand, 6785622 - 6785430
Alignment:
Q  75 cacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcatt 174  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||| ||||||||||||||    
T  6785622 cacacttattaagaaaactaaaacataagaatt-ggagtatagttttttgtgttttcttttgaaaaagttttatatgaagatgtaaaaacaattttcatt 6785524  T
Q  175 ggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  6785523 ggctattggttatggaaaaaatgaaagagagagaaaattgaatgtagtttgcatttaattttatgagaataaacaaaagtttttcttggaaaag 6785430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 74 - 263
Target Start/End: Original strand, 15959633 - 15959822
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||||||||||||||||||||||||||||||||| |||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||    
T  15959633 tcacatttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 15959732  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15959733 tggctattggttatggaaaaaattaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttgg 15959822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 6787006 - 6786812
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| | |||||||||||    
T  6787006 tcacacttattaagaaaactaaaacatgagaatttggagtatagttttttgtgttttctttggaaaaagttttatatgaagatgtaaacacaattttcat 6786907  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  6786906 tggctattggttatggaaaaaatgaaagagagtgaaaattgaatgtagtttgcatttaattttatgagaataaacaaaagtttttcttggaaaag 6786812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 33369718 - 33369527
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||| | ||||||| |||||||||||||    
T  33369718 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttatatg-agatgtaaaaacaattttcat 33369620  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  33369619 tggctattggttatggaaaaaatgaaagag--agaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttggaaaag 33369527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 32623998 - 32624176
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||    
T  32623998 tcacaattattaagaaaactaaaacataagaatttggagtgtagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 32624097  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  32624098 tggccattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 32624176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 45226306 - 45226112
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||| ||| | ||||||  ||||||||||||||||||| ||| |||||||||||||    
T  45226306 tcacacttattaagaaaactaaaacataataatttagagtatagttttatgtattttctttgaaaaaagttttataggaagacgtaaaaacaattttcat 45226207  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  45226206 tgactattggttatggaaaaaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttggaaaag 45226112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 2126206 - 2126028
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  2126206 tcacatttattaagaaaactaaaacataagaatttggaatatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 2126107  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| || ||||| |||||||    
T  2126106 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttaatgagaatgaacaaaa 2126028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 39555579 - 39555757
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||  |||||||||||||| |||||||| |||||||||||||    
T  39555579 tcacacttattaagaaaattaaaacataagaatttggagtataggtttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaacaattttcat 39555678  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||    
T  39555679 tggctattggttatggaaaaaatgaaagagagagaacattgaatgtaatttgcatttaattttatgagaataaacaaaa 39555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 24190637 - 24190466
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||||||| |||||||||||||    
T  24190637 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatacggagatgtaaaaacaattttcat 24190538  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| |||||||    
T  24190537 tggctattggttatggaaaaaatgaaagaaagagaaaatt-aatgtaatttgcatttaattttatgagaataa 24190466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 28016739 - 28016931
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||| |||| ||||||  |||| |||||||||||||||||| |||||||||||||    
T  28016739 tcacacttattaagaaaactaaaacataagaatttagagtatagtttttggtgttttctttgaaaaatgttttataggaagatgtaaaaacaattttcat 28016838  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||  ||||||| ||||||  |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||    
T  28016839 tggctattggttataaaaaaaataaaagag--agaaaattgaatgtaacttgcatttaattttatgagaataaacaaaagtttttcttggaaaag 28016931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 78 - 252
Target Start/End: Original strand, 42965813 - 42965985
Alignment:
Q  78 acttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggc 177  Q
    |||| |||||||||||||||||||| |||||| ||| ||||||||||||| |||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  42965813 acttattaagaaaactaaaacataaaaatttgaagtttagttttttgtgttttctttggaaaaa-ttttataggaagatgtaaaaacaattttcattggc 42965911  T
Q  178 tattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42965912 tattggttatggaaaa-atgaaagagagagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 42965985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 83 - 252
Target Start/End: Original strand, 12448970 - 12449138
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  12448970 ttaagaaaattaaaa-ataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggccattg 12449068  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  12449069 gttatggaaaaaatcaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 12449138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 83 - 268
Target Start/End: Original strand, 47600038 - 47600226
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagtttttt--gtgtattctttagaaaa-agttttataggaagatgtagaaacaattttcattggcta 179  Q
    |||| |||| |||||||||||||||| ||||||||||||||  ||||| |||| | |||| ||||||||||||||||||| |||||||||||||||||||    
T  47600038 ttaaaaaaattaaaacataagaatttagagtatagttttttttgtgtaatcttaaaaaaaaagttttataggaagatgtaaaaacaattttcattggcta 47600137  T
Q  180 ttggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  47600138 ttgtttatgaaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttggaaaag 47600226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 74 - 261
Target Start/End: Original strand, 13136547 - 13136730
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||   ||||||||||||||| ||||||||| |||    
T  13136547 tcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttcttta-aaaaaaaattataggaagatgtaaaaacaatttccat 13136645  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
    ||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  13136646 tggctattggttatggaaaaaatgaaagag--agaaaattgaatataatttgcatttaattttat-agaataaacaaaagtttttctt 13136730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 40718846 - 40718669
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||| ||||||||||| |||| |||||||||||||||||||||||| ||||||  ||||||||||||| |||| ||||||||||||||||||    
T  40718846 tcacacttattacgaaaactaaaatataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatatgaagttgtagaaacaattttcat 40718747  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaa 251  Q
    ||||||||||| || |||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||    
T  40718746 tggctattggtaatagaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaa 40718669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 7467958 - 7468144
Alignment:
Q  77 cacttgttaagaaaactaaaacataagaatttggagta-tagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    ||||| ||||||||||||||||||||||||||| |||| || |||||||||| |||||| |||||||||||| ||||||||||| | |||||||||||||    
T  7467958 cacttattaagaaaactaaaacataagaatttgaagtaataattttttgtgttttctttggaaaaagttttaaaggaagatgtaaatacaattttcattg 7468057  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    ||||||| ||| |  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  7468058 gctattgattaagagaaaaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagttttgcttg 7468144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 32983165 - 32983341
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||| |||| | ||||||||||||||||| |||||| ||||| |||||||| ||||||||| |||||||||||||    
T  32983165 tcacacttattaagaaaactaaaacataaaaattggaagtatagttttttgtgttttctttggaaaa-gttttataagaagatgtaaaaacaattttcat 32983263  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||    
T  32983264 tggc-attggttatggaaaaaatgaaagagagagaaaattgaatataatttgcatttaattttatgagaataaacaaaa 32983341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 85 - 262
Target Start/End: Original strand, 39932576 - 39932753
Alignment:
Q  85 aagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||  || |||||||||| |||||| || |||||||||| |||||||||||||    
T  39932576 aagaaaactaaaacataagaatttggagtatagttttttgtgttttttttttaataagttttataagaagatataaaaacaatttttattggctattggt 39932675  T
Q  185 tatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
     ||||| ||||| ||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  39932676 catggagaaaataaaagagagagaaaattgaatgtaatttgtatttaattttatgagaataaacaaaagtttttcttg 39932753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 3875012 - 3875208
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||  |||| || ||| |||||||||||||||||| ||||| |||||||||| ||    
T  3875012 tcacacttattaagaaaagtaaaacataagaatttgaagtatagtttt--gtgtttttttttgaaaaagttttataggaatatgtaaaaacaatttttat 3875109  T
Q  174 tggctat----tggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  3875110 tggctatatattggttatggaaaaaatgaaagagagagaaaattgaatgaaatttgcatttaattttatgagaataaacaaaagttttacttggaaaag 3875208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 75 - 262
Target Start/End: Original strand, 47014487 - 47014671
Alignment:
Q  75 cacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcatt 174  Q
    |||||||  |||| |||||||||||||||||| |||||||  ||||||||||| ||| ||  ||||||||||||||||| ||||| ||||||||||||||    
T  47014487 cacacttactaagtaaactaaaacataagaatctggagta--gttttttgtgttttcgttgaaaaaagttttataggaaaatgtaaaaacaattttcatt 47014584  T
Q  175 ggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    | |||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  47014585 gactattggttatggaaaaaatgaaagagagagaaaattgaatgt-atttacatttaattttatgagaataaacaaaagtttttcttg 47014671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 74 - 253
Target Start/End: Original strand, 28120748 - 28120927
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||||| | |||||||| |||||||||||||||||||| || |||| ||  | |||||| |||||||||| |||||||||||||    
T  28120748 tcacatttattaagaaaactaagaaataagaatgtggagtatagttttttgtgttttttttaaaatgaattttatgggaagatgtaaaaacaattttcat 28120847  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaag 253  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||    
T  28120848 tggctattgattatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgtgaataaacaaaag 28120927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 35691546 - 35691388
Alignment:
Q  89 aaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatg 188  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||  ||||||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  35691546 aaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaatttttattggctattggttatg 35691447  T
Q  189 gaa-aaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||| ||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  35691446 gaaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 35691388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 83 - 263
Target Start/End: Complemental strand, 46543141 - 46542963
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| ||||||  |||||  |||||||||||||| | ||||||||| ||||||||||||    
T  46543141 ttaaaaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaaaatttataggaagatgaaaaaacaatttccattggctattg 46543042  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    ||| |||| ||||||||||||  |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  46543041 gttgtggagaaaatgaaagag--agaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagtttttcttgg 46542963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 33431727 - 33431535
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||| | |||||||||||| || |||||||||||||| || |||  |||||||||||||||| |||| | |||||||||||||    
T  33431727 tcacacttattaagaaaactagatcataagaatttgtagcatagttttttgtgtttttttttaaaaaagttttataggaggatggaaaaacaattttcat 33431628  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||||||||| || ||||||||||||  |||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||| ||||    
T  33431627 tggctattggttatagagaaaatgaaagag--agaaaattaaatgtaatttgtatttcattttatgagaataaacaaaagtttttcttggaaaag 33431535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 43667296 - 43667472
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||| ||| ||||||||||||  |||||| |||||||||| ||||||  ||||||||||||||||||| ||| |||||||||||||    
T  43667296 tcacatttattaagaaaattaagacataagaatttaaagtataattttttgtgttttctttgaaaaaagttttataggaagacgtaaaaacaattttcat 43667395  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  43667396 tggccattggttatggaaaaaatgaaagag--agaaaattgaatgtaatttacatttaattttatgagaataaacaaaa 43667472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 83 - 268
Target Start/End: Complemental strand, 1820574 - 1820389
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagtttt-ttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctatt 181  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||  || ||| |||||||||||||||||||||||| ||| ||| |||||| ||| ||    
T  1820574 ttaagaaaactaaaacataagaatttggaatatagttttattgtgctttttttggaaaaagttttataggaagatgtaaaaa-aatattcattagctttt 1820476  T
Q  182 ggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||| || ||| |||||||||    
T  1820475 ggttatgaaaaaaatgaaagagagaaaaaattgaatgtaatttgcatttaattttatgagaataaacaaaggtcttttttgggaaag 1820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 74 - 263
Target Start/End: Complemental strand, 3076463 - 3076274
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| |||| |||||||||||| || |||||||||||||| || ||| ||| ||||||||| |||||||||| ||| |||||||||    
T  3076463 tcacacttattaagaaaattaaagcataagaatttgtagcatagttttttgtgttttatttggaataagttttatgggaagatgtaaaaataattttcat 3076364  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    |||| |||||||||||||||||| |||| || |||||||| ||||||||||||||||||||| || |||||||  |||||||||| ||||    
T  3076363 tggcaattggttatggaaaaaataaaagtgagagaaaattaaatgtaatttgcatttaatttcatgagaataagaaaaagtttttattgg 3076274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 74 - 258
Target Start/End: Original strand, 24728619 - 24728804
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagtttttt-gtgtattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| ||||||||||||||||||||||||||| || |||||||||| |||| |||||| ||| |||||| || |||||||||| ||||||||||||    
T  24728619 tcacacttattaagaaaactaaaacataagaatttgtagcatagtttttttgtgttttctttcgaataagtttcatgggaagatgtaaaaacaattttca 24728718  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    ||||| |||| ||||||||||||| ||||||| |||||||| ||||||||||||||||||||| |  |||||||  ||||||||||    
T  24728719 ttggcaattgattatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcacgagaataagaaaaagttttt 24728804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 74 - 260
Target Start/End: Complemental strand, 11241195 - 11241025
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| |||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| || ||||||||||    
T  11241195 tcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaccaattttcat 11241096  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttct 260  Q
    |||||||||||||||||||                |||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  11241095 tggctattggttatggaaa----------------aaattgaatgtaatttacatttaattttatgagaataaacaaaagtttttct 11241025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 85 - 252
Target Start/End: Original strand, 3861699 - 3861864
Alignment:
Q  85 aagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggt 184  Q
    |||||||||||||||||| |||||| |||||| |||||| ||| |||||||||| ||||||||| | |||||||| |||||||||||||||||||||| |    
T  3861699 aagaaaactaaaacataataatttgaagtataattttttatgttttctttagaataagttttattgaaagatgtaaaaacaattttcattggctattgat 3861798  T
Q  185 tatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||| |||||||||||| || | |||||| ||| ||||||||||||||||||||||||||||| ||||    
T  3861799 tatgaaaaaaatgaaag-gaga-aaaattaaatataatttgcatttaattttataagaataaaaaaaa 3861864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 76 - 252
Target Start/End: Original strand, 46818497 - 46818673
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| |||||||||  |||||||||||||||  ||||||||||||||| | ||||||  |||||||||||||||||||| || |||||||||||||||    
T  46818497 acacttattaagaaaagaaaaacataagaatttaaagtatagttttttgtattttctttgaaaaaagttttataggaagatataaaaacaattttcattg 46818596  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||| | |||||||| |||||||||  || |||||| |||| |||||||| |||||||||||| |||||||| ||||    
T  46818597 gctaatagttatggagaaaatgaaattgagagaaaactgaacgtaatttgtatttaattttatgagaataaataaaa 46818673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 93 - 259
Target Start/End: Original strand, 37735395 - 37735561
Alignment:
Q  93 taaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaa 192  Q
    |||||||||||||| || ||||||||||||||| | |||||| ||| |||||| || |||||| ||| |||||||||| ||||||||||| ||||||| |    
T  37735395 taaaacataagaatctgaagtatagttttttgtattttctttggaataagtttcatgggaagaagtaaaaacaatttttattggctattgattatggaga 37735494  T
Q  193 aaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttc 259  Q
    ||||| || ||| |||||||||||||||||||||||||||||| ||  ||||||||||||| |||||    
T  37735495 aaatggaaaagagagaaaattgaatgtaatttgcatttaatttcatgtgaataaacaaaagcttttc 37735561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 44148829 - 44148997
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||| |||||||||| |||||||||||| || |||||||||||||| |||||| ||| |||||| || |||||||||| |||||||||||||    
T  44148829 tcacacttattacgaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 44148928  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    |||| ||||||||||||||||||  |||||  |||||||| || |||||||||||||||||| || |||||||    
T  44148929 tggcaattggttatggaaaaaat--aagag--agaaaattaaacgtaatttgcatttaatttcatgagaataa 44148997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 93 - 251
Target Start/End: Original strand, 2246026 - 2246184
Alignment:
Q  93 taaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaa 192  Q
    |||||||| | ||||| |||||||||||||||||| ||||||  || |||||||||||||| ||||| ||| ||||||||||||||||| ||| |||  |    
T  2246026 taaaacattaaaatttagagtatagttttttgtgttttctttgaaataagttttataggaatatgtaaaaagaattttcattggctattcgttgtgggga 2246125  T
Q  193 aaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaa 251  Q
    || || |||||| |||||||| |||||||||||||||||||||||| ||||||||||||    
T  2246126 aagtggaagagagagaaaattaaatgtaatttgcatttaattttatgagaataaacaaa 2246184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 50012685 - 50012565
Alignment:
Q  147 ataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||| || || ||| |||||||||||| |||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50012685 ataggaatatataaaaataattttcattgg-tattagttatagaaaaaataaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 50012587  T
Q  247 acaaaagtttttcttgggaaag 268  Q
    ||||||||||||||||| ||||    
T  50012586 acaaaagtttttcttggaaaag 50012565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 74 - 263
Target Start/End: Complemental strand, 1035023 - 1034837
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||| |||||||||||||||||| |||| |||||  |||| |||||| ||| |||||||||  |||||| || |||||||||||||    
T  1035023 tcacatttattaagaaaattaaaacataagaatttggcgtattgtttt--gtgttttctttggaataagttttatgagaagatataaaaacaattttcat 1034926  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
     | ||||||||||  || |||||  | |||||| |||||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  1034925 cgactattggttacagagaaaatagatgagaaa-aaaattgaatgtaattcgcatttaatttcatgagaataaacaaaagtttttcttgg 1034837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 43765438 - 43765301
Alignment:
Q  99 ataagaatttggagtatagtttttt-gtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatg 197  Q
    |||| |||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||| |||||||||| |||| |||||| | ||||||    
T  43765438 ataaaaatttgtagtatagtttttttgtgttttctttagaataagttttataggaagatgtaaaaacatttttcattggttatttgttatgcagaaaatg 43765339  T
Q  198 aaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
     ||||||||||||||||||| |||||||||| ||||||    
T  43765338 gaagagaaagaaaattgaatttaatttgcatctaattt 43765301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 52985101 - 52984979
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||| |||||| |  |||||||||| |||||||||||||    
T  52985101 tcacacttattaagaaaactaatacataagaatttggagtatagttttttgtgttttctttggaataagtttcacgggaagatgtaaaaacaattttcat 52985002  T
Q  174 tggctattggttatggaaaaaat 196  Q
    ||||||||| ||| ||| |||||    
T  52985001 tggctattgattagggataaaat 52984979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 6787050 - 6787166
Alignment:
Q  141 agttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataa 240  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||  |    
T  6787050 agttttataggaagatgtaaaaataatttttattggctattggttatggaaaaaatgaaagagagag-aaattgaatgtagtttgcatttatttttacga 6787148  T
Q  241 gaataaacaaaagttttt 258  Q
    ||||||| ||||||||||    
T  6787149 gaataaataaaagttttt 6787166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 99 - 252
Target Start/End: Complemental strand, 25391824 - 25391674
Alignment:
Q  99 ataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatga 198  Q
    ||||||||||| |||||| |||||||||| ||||||||| || |||||||| ||| ||||| ||||||||||||||||||| | |||||||| ||  ||     
T  25391824 ataagaatttgaagtataattttttgtgttttctttagataa-gttttatatgaaaatgtaaaaacaattttcattggctaatagttatggagaag-tgg 25391727  T
Q  199 aagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  25391726 aagagata-aaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 25391674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 50370066 - 50369942
Alignment:
Q  137 aaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatg----taatttgcatttaa 232  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||||| |||||||||||||||| |||||||||||||    ||||||| ||||||    
T  50370066 aaaaagttttataggaagatgtaaaaacaatttctattggctattggttat-gaaaaaatgaaagagagagaaaattgaatgtaattaatttgtatttaa 50369968  T
Q  233 ttttataagaataaacaaaagttttt 258  Q
    |||||| |||||||| ||||||||||    
T  50369967 ttttatgagaataaaaaaaagttttt 50369942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 137 - 252
Target Start/End: Complemental strand, 16854245 - 16854131
Alignment:
Q  137 aaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||| ||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||| | |||||| ||||||||||||||||||||||    
T  16854245 aaaaagttttattggaaggtgtaaaaacaatttttattggctattggttatggagaaaatgaaagagagataaaattaaatgtaatttgcatttaatttt 16854146  T
Q  237 ataagaataaacaaaa 252  Q
    || |||| ||||||||    
T  16854145 atgagaa-aaacaaaa 16854131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 32742195 - 32742342
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| ||||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||  || || || |||||||||||||    
T  32742195 tcacacttattaaaaaaactaaagcataagaattttgagtatagttttttgtgttttctttaaaaaaagttttataaaaaaatataaaaacaattttcat 32742294  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaa 221  Q
    |    |||| ||||||||||||||||||| | |||||||| |||||||    
T  32742295 taatcattgattatggaaaaaatgaaagaaagagaaaattaaatgtaa 32742342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 80 - 252
Target Start/End: Original strand, 47302907 - 47303077
Alignment:
Q  80 ttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggcta 179  Q
    |||||||||||||||||| ||||||| |||||||||| ||||  |||| || ||  ||| |||||| ||||||||||||| ||| |||||||||||||||    
T  47302907 ttgttaagaaaactaaaatataagaaattggagtataatttt--gtgtttttttaggaataagtttcataggaagatgta-aaataattttcattggcta 47303003  T
Q  180 ttggttatggaaaaaatgaaagagaa-agaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||| ||||| | ||||||||| | || |||||| ||||||||||||||||||||||| || ||||||| |||||    
T  47303004 ttgattatgtagaaaatgaaaaaaaatagaaaactgaatgtaatttgcatttaatttcatgagaataagcaaaa 47303077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 74 - 230
Target Start/End: Original strand, 7875933 - 7876091
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagtttt---ataggaagatgtagaaacaatttt 170  Q
    |||||||| ||||||||| ||||| |||| |||||| | ||||||||||||||| |||||| |||    ||||   |||| |||||||| ||| ||||||    
T  7875933 tcacacttattaagaaaattaaaatataaaaatttgaattatagttttttgtgttttcttt-gaatttttttttttatagaaagatgtaaaaataatttt 7876031  T
Q  171 cattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcattt 230  Q
     |||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  7876032 tattgactattggttatggaaaaaataaaagagagagaaaattgaatgtaatttgcattt 7876091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 258
Target Start/End: Original strand, 23392214 - 23392342
Alignment:
Q  129 ttctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcat 228  Q
    |||||| ||| ||||||||||| || || || ||| ||||||||||| |||||||||||||| |||||| |||| | |||||||| ||||||||||||||    
T  23392214 ttctttggaataagttttatagaaaaatataaaaataattttcattgactattggttatggagaaaatggaagaaagagaaaatt-aatgtaatttgcat 23392312  T
Q  229 ttaattttataagaataaacaaaagttttt 258  Q
    ||||||| || |||||||||||||||||||    
T  23392313 ttaatttcatgagaataaacaaaagttttt 23392342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 121 - 245
Target Start/End: Original strand, 10558796 - 10558920
Alignment:
Q  121 tttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgta 220  Q
    ||||||| |||||| ||| || |||||| |||||||||| |||||||||||||||||||||| ||||||| |||||| |||||| | |||||| ||||||    
T  10558796 tttgtgttttctttggaataatttttatgggaagatgtaaaaacaattttcattggctattgattatggagaaaatggaagagagaaaaaatttaatgta 10558895  T
Q  221 atttgcatttaattttataagaata 245  Q
    |||| |||||||||| || ||||||    
T  10558896 atttacatttaatttcatgagaata 10558920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 30221893 - 30221771
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||  ||||||||| ||||||||||||| ||||| |||| |||||||||| ||||||| || ||||||||| |||||||||| ||||| |||| ||    
T  30221893 tcacactaattaagaaaattaaaacataagaacttggaatataattttttgtgttttctttaaaataagttttatgggaagatgtaaaaacattttttat 30221794  T
Q  174 tggctattggttatggaaaaaat 196  Q
    ||| ||||||||||||| |||||    
T  30221793 tggatattggttatggagaaaat 30221771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 5858430 - 5858526
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||| || ||||||||| ||| || |||||||||| | |||||||||||||||    
T  5858430 aagttttataggaagatataaaaacaattttcattggctattggttattgagaaaatgaaacagagagcaaattgaatgcactttgcatttaatttt 5858526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 45840059 - 45840220
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||| | |||| |  ||||||||||||||  | |||  || | |||||||||||||||| | |||||||||||||    
T  45840059 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatttttgaaatatgttttataggaagatgaa-aaacaattttcat 45840157  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||   ||| |||| |||||||||||| ||| || |||||||||| | |||||||||||||||    
T  45840158 tggtagttgattatagaaaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 45840220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 5950541 - 5950445
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||||| |||||||||||||||| || ||||| |||| | ||| |||||||||||    
T  5950541 aagttttataggaagatgtaaaaacaattttcattggtcattggttattgaaaaaatgaaagagagagcaaattaaatgcactttacatttaatttt 5950445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 47026736 - 47026655
Alignment:
Q  154 gatgtagaaacaattttcattggcta-ttggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatt 234  Q
    |||||| ||| ||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  47026736 gatgtataaataattttcattggctaattggttaaggaaaaaatgaaagagaaaaaaatttgaatgtaatttgcatttaatt 47026655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 83 - 224
Target Start/End: Original strand, 298670 - 298812
Alignment:
Q  83 ttaagaaaactaaaacataaga--atttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctat 180  Q
    |||||||||||||||||||| |  | ||| ||||||||||  ||||| |||||||||| |||||| || |||||||||| |||  ||||| |||||||||    
T  298670 ttaagaaaactaaaacataaaataacttgaagtatagtttgatgtgttttctttagaataagttt-atgggaagatgtaaaaattattttaattggctat 298768  T
Q  181 tggttatggaaaaaatgaaagagaaagaaaattgaatgtaattt 224  Q
    || ||||||| |||||| |||| | |||||||| ||||||||||    
T  298769 tgattatggagaaaatggaagaaagagaaaattaaatgtaattt 298812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 16688238 - 16688142
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||||||||| |||||||||||||||| | |||||||| || ||||||||||| |||| | ||| |||| | |||||||||||||||    
T  16688238 aagttttataggaagatgtaaaaacaattttcattggttgttggttattgagaaaatgaaagaaaaagcatattaaatgaactttgcatttaatttt 16688142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 41063910 - 41063747
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgt-attctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| |||||||||| ||||||||  | |||| |  |||||||||||||| |||||| | | ||  |||||||| |||||||| ||| ||||||||    
T  41063910 tcacacttattaagaaaaccaaaacatagtagtttgcaacatagttttttgtgttattcttaaaataagcttttatagaaagatgtaaaaataattttca 41063811  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||| |||| ||||| || ||||| ||||||| |  |||||||||| | |||||||||||||||    
T  41063810 ttggttatttgttattgagaaaatcaaagagagaacaaattgaatgcactttgcatttaatttt 41063747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 4672998 - 4672924
Alignment:
Q  75 cacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttata 149  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||||||  |||||||||||||    
T  4672998 cacacttattaagaaaactaaaatataagaatttggagtatagttttttgtattttctttgaaaaaagttttata 4672924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 7397874 - 7397712
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| |||||||||| |||  | |||| |  ||||||||||||||  |||||  || || ||||||||||||||||| |||||||||||||    
T  7397874 tcacacttattaaaaaaactaaaatatagtagtttgtaacatagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaattttcat 7397775  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||   ||| |||| || ||||||||| | | || |||||||||| | |||||||||||||||    
T  7397774 tggtatttgattatagagaaaatgaaaaaaagagcaaattgaatgcactttgcatttaatttt 7397712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 37538977 - 37538815
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| ||||| |||  | |||| |  ||||||| ||||||  || ||  || |||||||||||||||||||| | |||||||||||    
T  37538977 tcacacttattaagaaaattaaaatatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaagacaattttcat 37538878  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||| | |||||||| || ||||||||||||  || |||||||||| | |||||| ||||||||    
T  37538877 tggttgttggttatcgagaaaatgaaagagggagcaaattgaatgcactttgcagttaatttt 37538815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 32318566 - 32318683
Alignment:
Q  88 aaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaa-aagttttataggaagatgtagaaacaattttcattggctattggtta 186  Q
    |||| ||||| |||| ||||||||||||| |||||| | | || |||  ||| ||||||||| |||||||||| |||||||||||||||| |||||||||    
T  32318566 aaaattaaaatataaaaatttggagtataattttttcttttttgtttttaaataagttttattggaagatgtaaaaacaattttcattggttattggtta 32318665  T
Q  187 tggaaaaaatgaaagaga 204  Q
    |||| ||||||| |||||    
T  32318666 tggagaaaatgagagaga 32318683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 35366198 - 35366358
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| |||||||||||||||||||  | |||| |  ||||||| ||||||  || ||  || || |||||||| |||||||| |||||||||| ||||    
T  35366198 acacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatcgttgaaataaattttatagaaagatgtaaaaacaattttaattg 35366297  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    | |||||||||| ||  |||||| ||||| || |||||||||| | |||| ||||||||||    
T  35366298 gttattggttattgatcaaatgatagagatagcaaattgaatgcactttgaatttaatttt 35366358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 14087030 - 14086966
Alignment:
Q  162 aacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcat 228  Q
    |||||||||||||||||||| |||||||||||||| ||||||  |||||||||||||||||||||||    
T  14087030 aacaattttcattggctattagttatggaaaaaataaaagag--agaaaattgaatgtaatttgcat 14086966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 50665315 - 50665237
Alignment:
Q  190 aaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||| || ||||||| ||||||||||| |||| ||||    
T  50665315 aaaaaatgaaagagagagaaaattaaatgtaatttgcaattaatttcatgagaataagcaaaagtttttattggaaaag 50665237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 25185300 - 25185459
Alignment:
Q  78 acttgttaagaaaactaaaacataagaatttggagtatagtttttt-gtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattgg 176  Q
    |||| |||||||||||||||||||  | |||| |  |||||||||| ||||  |||||  || |||||||||||||||||||  |||||| |||||||||    
T  25185300 acttattaagaaaactaaaacatagtagtttgtaacatagtttttttgtgttatctttgaaataagttttataggaagatgtgaaaacaactttcattgg 25185399  T
Q  177 ctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
       ||| |||| || ||||||||| ||| |  |||||||||| | |||||||||||||||    
T  25185400 tagttgattatagagaaaatgaaaaagagaacaaattgaatgcactttgcatttaatttt 25185459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 8889756 - 8889845
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||||||||| |||||||||||       ||||||||| || ||||||||||||| ||||||||||||| | ||| |||||||||||    
T  8889756 aagttttataggaagatgtaaaaacaattttc-------attggttattgagaaaatgaaagagagagaaaattgaatgcactttacatttaatttt 8889845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 220
Target Start/End: Original strand, 30701378 - 30701524
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| ||||||||||||||  | |||| |  ||| ||||||||||  |||||  || |||||||||||||||||||  ||| |||||||||    
T  30701378 tcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttgaaataagttttataggaagatgtgaaaataattttcat 30701477  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgta 220  Q
    |||   ||| |||| || ||||||||| ||| || ||||||||||||    
T  30701478 tggtagttgattatagagaaaatgaaaaagagagcaaattgaatgta 30701524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 44510212 - 44510374
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||| |||  | |||  |  ||||||||||||||  | |||  || || |||||||||||| |||| |||||||||||||    
T  44510212 tcacacttcttaagaaaactaaaatatagtagtttataacatagttttttgtgttatttttgaaataaattttataggaagttgtaaaaacaattttcat 44510311  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||   |||| |||| || |||||||||  || || |||||||||| | |||||||||||||||    
T  44510312 tgataattgattatagagaaaatgaaaaggagagcaaattgaatgcactttgcatttaatttt 44510374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 235
Target Start/End: Original strand, 52841438 - 52841599
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||||||||| || | |||| |||||||||| |||| |  || ||| || |||||| |||| |||||||  |||||||||||||    
T  52841438 tcacatttattaagaaaactaaaacacaatagtttgtagtatagtttcttgtcttatccttaaaataagtttcatagaaagatgttaaaacaattttcat 52841537  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    ||| |||| ||||| |  ||||||||||  | || ||| ||| || |||||||| |||||||    
T  52841538 tggttattagttatagggaaaatgaaaggaagagcaaaatgattgcaatttgcacttaattt 52841599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 15912300 - 15912204
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||||||||| |||||||||||||||  | ||| |||  || |||||||||  || || |||||||||| | |||||||||||||||    
T  15912300 aagttttataggaagatgtaaaaacaattttcattgattgttgattacagagaaaatgaaaaggagagcaaattgaatgcagtttgcatttaatttt 15912204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 13351785 - 13351686
Alignment:
Q  137 aaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||||||||||||||||||||||| ||||||||||||||||   ||| |||| || |||||||||  || |  |||||||||| | |||||||||| ||||    
T  13351785 aaaaagttttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaaaggagaacaaattgaatgcactttgcatttagtttt 13351686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 237
Target Start/End: Complemental strand, 36384092 - 36383929
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||  |||||||| | ||||||   |||| ||||||||||  | ||| ||| || ||| || | ||||| || |||||||| ||||    
T  36384092 tcacacttattaagaaagttaaaacattataatttgagatataattttttgtgttatttttggaataaatttcatggaaagatataaaaacaattatcat 36383993  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    |||||| |  ||||||| ||||| |||  ||||  |||||||||| ||||||||||||||||||    
T  36383992 tggctaattattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcatttaatttta 36383929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 50176690 - 50176588
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||||||||||||||||||  | |||| |  ||||||||||||||  |||||  || || ||||||||||||||||| |||||||||| ||    
T  50176690 tcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaatttttat 50176591  T
Q  174 tgg 176  Q
    |||    
T  50176590 tgg 50176588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 39151242 - 39151315
Alignment:
Q  163 acaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||| |||| ||||| || ||||||||||| |||| |||||||||| | ||| |||||||||||    
T  39151242 acaattttcattggttattagttattgataaaatgaaagataaagcaaattgaatgcactttacatttaatttt 39151315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 30221777 - 30221721
Alignment:
Q  206 agaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    |||||||||||  ||| |||||||||||||||||||||||| ||| |||||||||||    
T  30221777 agaaaattgaaattaaattgcatttaattttataagaataagcaacagtttttcttg 30221721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 23873823 - 23873986
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||| || ||   |||||  ||||| ||||||||||  || || ||| |||||| || | |||||||| ||| |||||||||    
T  23873823 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 23873922  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    ||| ||    ||||||| ||||| ||| ||| |  ||||| |||| ||||||||||||||||||    
T  23873923 tggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaatttgcatttaatttta 23873986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 34102053 - 34102127
Alignment:
Q  161 aaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||||| |||||||||| || ||| ||||||||| || |||||| ||| | |||||||||||||||    
T  34102053 aaacaattttcattggttattggttattgagaaagtgaaagagagagcaaattg-atgcactttgcatttaatttt 34102127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 52984921 - 52984870
Alignment:
Q  213 tgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttggg 264  Q
    ||||||||||||| ||||||||| || ||||||| |||||||||||||||||    
T  52984921 tgaatgtaatttgtatttaatttcatgagaataagcaaaagtttttcttggg 52984870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 42724185 - 42724101
Alignment:
Q  151 gaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    ||||||||| |||||||||| ||| | |||| |||||| | ||||||| || || || ||||| |||| ||||||||||||||||    
T  42724185 gaagatgtaaaaacaatttttattagttatttgttatgaagaaaatgatagggagagcaaattaaatgcaatttgcatttaattt 42724101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 43359740 - 43359696
Alignment:
Q  192 aaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||||||||||||| || |||||||||||| |||||||||||||||    
T  43359740 aaaatgaaagagagagcaaattgaatgtactttgcatttaatttt 43359696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 48566156 - 48566203
Alignment:
Q  214 gaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||    
T  48566156 gaatgtaatttacatttaattt-atgagaataaacaaaagtttttcttg 48566203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 4672915 - 4672873
Alignment:
Q  226 catttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||| ||||||||||||||||||| |||| ||||    
T  4672915 catttaattttatgagaataaacaaaagttttttttggaaaag 4672873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 7190824 - 7190771
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgt 127  Q
    |||||||| |||| ||||||||||||| | ||||| ||||||||||| ||||||    
T  7190824 tcacacttattaaaaaaactaaaacatgataatttagagtatagtttcttgtgt 7190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 33
Target Start/End: Original strand, 26027682 - 26027711
Alignment:
Q  4 aatgtctaccatttatttttaagagacata 33  Q
    ||||||||||||||||||||||||||||||    
T  26027682 aatgtctaccatttatttttaagagacata 26027711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 46804612 - 46804685
Alignment:
Q  162 aacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    ||||||||| | ||| |||| ||||| || |||||||||||||||| | | |||||| || |||||||||||||    
T  46804612 aacaatttttactggttattagttatagagaaaatgaaagagaaagcataatgaatgcaaattgcatttaattt 46804685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 50012732 - 50012687
Alignment:
Q  88 aaaactaaaacataagaatttggagtatagttttttgtgtattctt 133  Q
    |||| ||||| ||| ||||||||||||||||||||||||| |||||    
T  50012732 aaaattaaaatataggaatttggagtatagttttttgtgttttctt 50012687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 51338956 - 51339052
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatgga-aaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    |||||| |||| |||||||| || ||||||||||||| |||| ||||| || |||| |||||||||||  | | | |||| || |||||||||||||    
T  51338956 aagtttcatagaaagatgtaaaatcaattttcattggttattagttatagagaaaattgaaagagaaaacatagtaaatgcaaattgcatttaattt 51339052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 2e-77; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 74 - 263
Target Start/End: Complemental strand, 19264268 - 19264078
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||| ||||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  19264268 tcacacttattaagaaaactaaaacataagaatttagagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 19264169  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaa-tttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  19264168 tggctattggttatggaaaaaattaaagagagagaaaattgaatgtaattttgcatttaattttatgagaataaacaaaagtttttcttgg 19264078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 6110191 - 6110371
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||  |||||||||||||||||||||||| |||||||||||||    
T  6110191 tcacacttattaagaaaactaaaacataagaatttggagtatagctttttgtgttttcttcggaaaaagttttataggaagatgtaaaaacaattttcat 6110290  T
Q  174 tggctattggttatggaaaaaatgaa--agagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  6110291 tggctattggttatggaaaaaatgaaagagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 6110371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 76 - 252
Target Start/End: Original strand, 28599142 - 28599318
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| ||| |||||||||||    
T  28599142 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagatttataggaagatgtaaaaataattttcattg 28599241  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  28599242 gctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatatgcatttaattttatgagaataaacaaaa 28599318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 3201494 - 3201316
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||||||||||| |||||| ||||||||||||||| |||||||| |||||||||||||    
T  3201494 tcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcat 3201395  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| |||||||||||||    
T  3201394 tggctattggttatggaaaaaatgaaagaaagataaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 3201316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 45085425 - 45085247
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||| | ||||||  ||||||||||||||||||||||| |||||||||||||    
T  45085425 tcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 45085326  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    | || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  45085325 tagccattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 45085247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 35517291 - 35517119
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||| ||| |||||||||    
T  35517291 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtgagatgtaaaaataattttcat 35517192  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  35517191 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 35517119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 28858480 - 28858283
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagta---tagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaatttt 170  Q
    |||||| | ||||||||||||||||||||||||||  | ||   ||||||||||||| ||||||  |||||||||||||| |||||||| ||| ||||||    
T  28858480 tcacacatattaagaaaactaaaacataagaatttaaaatatagtagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataatttt 28858381  T
Q  171 cattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28858380 cattggctattggttattgtaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttgggaaag 28858283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 45660536 - 45660355
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaat---ttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaatttt 170  Q
    ||||| || ||||||||||||||||||||||||   ||||||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||    
T  45660536 tcacatttattaagaaaactaaaacataagaataatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttt 45660437  T
Q  171 cattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||||||||||||||| ||||||||||||| | |||||| |||||||||||||||||||||||| |||||||||||||    
T  45660436 cattggctattggttatggagaaaatgaaagagagataaaattaaatgtaatttgcatttaattttatgagaataaacaaaa 45660355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 11617192 - 11616998
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||| || | ||||||  ||||||||||||||||||||||| |||||||||||||    
T  11617192 tcacacttattaagaaaattaaaacataagaatttggagtatagtttttggtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 11617093  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||||||||| | |||||| ||||||| ||||||||||||| ||||||||||| ||||||| | ||||| |||||||||||||||| ||||    
T  11617092 tggctattggttatagtaaaaataaaagagagagaaaattgaatgaaatttgcattttattttatgaaaataagcaaaagtttttcttggaaaag 11616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 75 - 252
Target Start/End: Original strand, 33198624 - 33198801
Alignment:
Q  75 cacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcatt 174  Q
    ||||||| ||||||||||||||| ||||||||||||| | ||||||||||||| ||||||| || |||||||||||||||||||| |||||||||| |||    
T  33198624 cacacttattaagaaaactaaaatataagaatttggactctagttttttgtgttttctttaaaagaagttttataggaagatgtaaaaacaattttgatt 33198723  T
Q  175 ggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    || ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  33198724 ggttattggttatggagaaaatgaaagagagagaaaattgaatgtaatttgcatttaattctatgagaataaacaaaa 33198801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 74 - 262
Target Start/End: Complemental strand, 12938410 - 12938222
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||  || ||||||||||||||  |||| |||||||||||||    
T  12938410 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgctttctttgaaataagttttataggaaagtgtaaaaacaattttcat 12938311  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    ||||||||| ||||||| ||||| ||||||| | |||  ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  12938310 tggctattgattatggagaaaataaaagagagataaatatgaatgtaatttgcatttaatttcatgagaataaacaaaagtttttcttg 12938222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 41528425 - 41528246
Alignment:
Q  74 tcacacttgttaagaaaactaaaa-cataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||| ||||||  ||    ||||||||||||||||| ||||||||||||    
T  41528425 tcacacttattaagaaaattaaaaacataagaatttgaagtatagttttttgtgttttctttgaaattttttttataggaagatgtaaaaacaattttca 41528326  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  41528325 ttggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 41528246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 74 - 263
Target Start/End: Original strand, 29524033 - 29524222
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||| |||||||||| |||||||||||| || ||| |||||||||| |||||| ||| |||||| || |||||||||| |||||||||||||    
T  29524033 tcacacttattatgaaaactaaagcataagaatttgtagcataattttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 29524132  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    |||| |||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| || |||||||  |||||||||| ||||    
T  29524133 tggcaattggttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataagaaaaagtttttattgg 29524222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 9864710 - 9864903
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatag-ttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||||| || |||||| ||| ||||||||||||    
T  9864710 tcacacttattaagaaaactaaaacataagaatttggagtatagtttttttgtgttttctttggaataagtttcatgggaagaggtaaaaacaattttca 9864809  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||| |||| ||||||| |||||| |||||  | |||||||||||||||||||||||||||| || ||||||| |||| ||||||||||| ||||    
T  9864810 ttggcaattgattatggagaaaatggaagag--ataaaattgaatgtaatttgcatttaatttcatgagaataagcaaatgtttttcttggaaaag 9864903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 83 - 262
Target Start/End: Complemental strand, 5963359 - 5963181
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    ||||||||||||||| |||||||||| |||| || |||||||||| |||||||||| ||||||||| ||| |||||| ||| |||||| |||||||||||    
T  5963359 ttaagaaaactaaaatataagaatttagagtctaattttttgtgttttctttagaataagttttatggga-gatgtaaaaataatttttattggctattg 5963261  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    |||||| | |||||| |||||| |||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  5963260 gttatgaagaaaatggaagagagagaaaattgaatgtaatttgcatttaatgtcataagaataaagaaaagtttttcttg 5963181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 8701770 - 8701576
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||| ||| |||||||||||||||||||| |||||| || |||||||||| ||| |||||| ||| |||||| || |||||||||| |||||||||||||    
T  8701770 tcacgcttattaagaaaactaaaacataaaaatttgtagcatagttttttatgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 8701671  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||||||||||||||||||| |||||| |||||||| |||| |||||| ||||||||| || |||| || ||||||||||| |||| ||||    
T  8701670 tggctattggttatggaaaaaatggaagagagagaaaattaaatgaaatttgtatttaatttcatgagaacaagcaaaagtttttattggaaaag 8701576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 25572213 - 25572036
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||| |||||||||||| || |||||||||||||| |||||| ||| |||||| || |||||||||| |||||||||||||    
T  25572213 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 25572114  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||| ||||||||||||| |||||| |||||| |||||||| ||||||||||||||||||||| || ||||||| |||||    
T  25572113 tggatattggttatgga-aaaatggaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataagcaaaa 25572036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 74 - 258
Target Start/End: Original strand, 6765925 - 6766110
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| |||||||||| |||||| ||||||||||||| ||| ||| || ||| || ||||||||||||||||| |||||||||| ||    
T  6765925 tcacacttattaagaaaattaaaacataaaaatttgaagtatagttttttatgttttcattggaataaattttataggaagatgtaaaaacaatttttat 6766024  T
Q  174 tggctattggttatgg-aaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    || ||||||||||||| |||||||| |||||| ||||||||||||||||||| |||||||||| || |||||||||||||| ||||    
T  6766025 tgactattggttatggaaaaaaatggaagagagagaaaattgaatgtaatttacatttaatttaatgagaataaacaaaagctttt 6766110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 74 - 262
Target Start/End: Complemental strand, 33677651 - 33677463
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||| ||| ||| |||||||||||||||| |||||| || |||||||||| ||| || |||  |  |||||||||||||||||||| |||||||||||||    
T  33677651 tcacgcttattacgaaaactaaaacataaaaatttgaagaatagttttttatgttttttttttactaagttttataggaagatgtaaaaacaattttcat 33677552  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    || |||||||||||||| |||||  ||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||||||||||    
T  33677551 tgactattggttatggagaaaattgaagagaaagaaaattgaatgttattagcatttaatttcatgagaataaacaaaagtttttcttg 33677463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 120 - 262
Target Start/End: Original strand, 40584436 - 40584578
Alignment:
Q  120 ttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgt 219  Q
    |||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||| | |||||||||| |||||||||||||| ||||||||||||||    
T  40584436 ttttgtgttttctttagaataagttttatgggaagatgtaaaaacaattttcattggttgttggttatgggaaaaatgaaagagagagaaaattgaatgt 40584535  T
Q  220 aatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    |||||||||||||||| || | |||||||||||||||||||||    
T  40584536 aatttgcatttaatttcatgaaaataaacaaaagtttttcttg 40584578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 100 - 252
Target Start/End: Complemental strand, 14874105 - 14873952
Alignment:
Q  100 taagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaa 199  Q
    ||||| |||||||||||||||||||||| ||||||  ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  14874105 taagagtttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaataattttcattggctattggttatggagaaaatgaa 14874006  T
Q  200 agagaaagaaaattgaatgtaatttgca-tttaattttataagaataaacaaaa 252  Q
    ||||| | |||||| ||||||||||||| ||||||| ||| |||||||||||||    
T  14874005 agagagataaaattaaatgtaatttgcattttaattatatgagaataaacaaaa 14873952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 85 - 262
Target Start/End: Original strand, 24204532 - 24204709
Alignment:
Q  85 aagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggt 184  Q
    |||||||||||||| ||||||||||||||||| ||| |||||| |||||| ||| |||||||||||||| ||||| || |||||||||||||||||||||    
T  24204532 aagaaaactaaaacctaagaatttggagtataatttattgtgttttctttggaataagttttataggaatatgtaaaatcaattttcattggctattggt 24204631  T
Q  185 tatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    |||| | |||||| |||||| |||||||||||| |||||| |||||||| | || ||||||||| ||| |||||||||    
T  24204632 tatgaagaaaatggaagagagagaaaattgaatataatttacatttaatatcatgagaataaactaaattttttcttg 24204709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 7645219 - 7645400
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||||||||||| | |||||||| ||| |||||| || ||| || |||| ||||| |||||||||||||    
T  7645219 tcacacttattaagaaaactaaaacataagaatttggagtataatattttgtgttttccttagaataaatttcatgggaacatgtaaaaacaattttcat 7645318  T
Q  174 tggctattggttatggaaaaaatg---aaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||  ||||||| ||||||   ||  | | |||||||||||||||||||||||||||||| || |||||||||||||    
T  7645319 tggctattaattatggagaaaatggttaattatagagaaaattgaatgtaatttgcatttaatttcatgagaataaacaaaa 7645400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 35023066 - 35022871
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||| || ||| ||  |||||| ||||||||||||| |||||||||||||    
T  35023066 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgt-ttttttggagtaagtttcataggaagatgtaaaaacaattttcat 35022968  T
Q  174 tggc--tattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    | ||  ||||| ||| ||| ||||||  ||||| ||||||||||||  |||||||||||||||| || |||  ||||||||| |||| |||| ||||    
T  35022967 ttgctatattgtttaaggagaaaatggtagagagagaaaattgaatacaatttgcatttaatttaatgagataaaacaaaagattttgttggaaaag 35022871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 35115795 - 35115943
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaa-aagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||| || |||   || ||||||||||| |||||||| ||||||||||||    
T  35115795 tcacacttattaagagaactaaaacataagaatttggagtatagttttttgtgtttttttttttaataagttttatagaaagatgtaaaaacaattttca 35115894  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaa 221  Q
    || | ||||||||||||| |||||| ||||||  |||||||||||||||    
T  35115895 tttgttattggttatggagaaaatggaagagagtgaaaattgaatgtaa 35115943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 83 - 261
Target Start/End: Complemental strand, 44455148 - 44454972
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| || ||| ||| |||||| || |||| | ||| ||| ||||  ||||||||||||    
T  44455148 ttaagaaaactaaaatatatgaatttggagtatagttttttgtgttttattttgaataagtttcatgggaaaacgtaaaaaaaatt--cattggctattg 44455051  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
     |||| || |||||| ||||||   |||||||||||||||||||||||||||| || ||||||| ||| ||||||||||    
T  44455050 attatagagaaaatggaagagaggaaaaattgaatgtaatttgcatttaatttcatgagaataagcaagagtttttctt 44454972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 74 - 204
Target Start/End: Original strand, 40808712 - 40808841
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||| |||||||||||| || |||||||||||||| |||||| ||| |||||| || |||||||||| |||||||||||||    
T  40808712 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcat-ggaagatgtaaaaacaattttcat 40808810  T
Q  174 tggctattggttatggaaaaaatgaaagaga 204  Q
    | || |||||||| ||||||||| |||||||    
T  40808811 tagcaattggttagggaaaaaataaaagaga 40808841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 43415569 - 43415468
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||||||  |||||||||||||| ||||||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  43415569 tcacacttactaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttaaaaaaagttttataggaagatgtaaaaacaattttcat 43415470  T
Q  174 tg 175  Q
    ||    
T  43415469 tg 43415468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 83 - 258
Target Start/End: Original strand, 30830597 - 30830772
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    ||||||||| ||||||||||||| |||||||||   ||||||||| || |||  || |||||| ||  |||||| || ||| || ||||||||| |||||    
T  30830597 ttaagaaaattaaaacataagaaattggagtatgtctttttgtgttttttttgaaataagtttcatgagaagatttaaaaaaaaatttcattggttattg 30830696  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
     |||| || ||||||||| ||| ||||||||| |||||||||||||||||||| || ||||||| ||||| |||||    
T  30830697 attattgagaaaatgaaaaagagagaaaattgtatgtaatttgcatttaatttcatgagaataatcaaaaattttt 30830772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 26998485 - 26998323
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||||||||||   | |||| |  ||||||||||||||  |||||| || |||||||||||||||||||| |||||||||||||    
T  26998485 tcacatttattaagaaaactaaaacatggtagtttgtaagatagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcat 26998386  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||   ||| |||| || ||||||||| ||| || |||||||||| | |||||||||||||||    
T  26998385 tggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 26998323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 32010270 - 32010108
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||| |||||  | |||| | |||||||||||||||  |||||  || |||||||||||||||||||| ||| |||||||||    
T  32010270 tcacacttattaagaaaactaatacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcat 32010171  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||   ||| |||| || ||||||||| ||| || ||||| |||| | |||||||||||||||    
T  32010170 tggtagttgattatagagaaaatgaaaaagagagcaaattaaatgcactttgcatttaatttt 32010108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 30421232 - 30421352
Alignment:
Q  132 tttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcattta 231  Q
    |||| ||||||||||||| ||||||||| |||||||||| || |  ||||  || |  ||||||||||||| | |||||||| |||||||||| ||||||    
T  30421232 tttaaaaaaagttttataagaagatgtaaaaacaatttttatcgattattaatttttaaaaaaatgaaagaaagagaaaattaaatgtaatttacattta 30421331  T
Q  232 attttataagaataaacaaaa 252  Q
    |||||||||||||||||||||    
T  30421332 attttataagaataaacaaaa 30421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 32273841 - 32273677
Alignment:
Q  76 acacttgttaagaaaactaaaacata--ag--aatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttc 171  Q
    |||||| |||||||||||||||||||  ||  |||||| |  ||||||||||||||  |||||  || ||||||||||||||||| || |||||||||||    
T  32273841 acacttattaagaaaactaaaacatagtagtcaatttgtaacatagttttttgtgttatctttgaaataagttttataggaagatataaaaacaattttc 32273742  T
Q  172 attggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||   ||| |||| || ||||||||| ||| || |||||||||| | ||| |||||||||||    
T  32273741 attggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttacatttaatttt 32273677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 5280592 - 5280642
Alignment:
Q  167 ttttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaat 217  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5280592 ttttcattggctattggttatggaaaaaatgaaagagagagaaaattgaat 5280642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 9709615 - 9709526
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatt 229  Q
    |||||||||||||||||||  |||||||||||||| | ||||| |||| || ||||||||||||| |  |||||||||| ||||||||||    
T  9709615 aagttttataggaagatgtgaaaacaattttcatttgttattgattattgagaaaatgaaagagagaacaaattgaatgcaatttgcatt 9709526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 258
Target Start/End: Original strand, 39696878 - 39696975
Alignment:
Q  161 aaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    |||||||||||||| ||||||| | || || |||||| |||| | |||||||| |||||||||||||||||||||  | |||||||||||| ||||||    
T  39696878 aaacaattttcattagctattgatcatagagaaaatggaagaaagagaaaattaaatgtaatttgcatttaatttcgtgagaataaacaaacgttttt 39696975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 32428025 - 32427963
Alignment:
Q  206 agaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||||||||||||||  ||||||||| | ||||||||||||||||||||||||| ||||    
T  32428025 agaaaattgaatgtaatttatatttaatttaacaagaataaacaaaagtttttcttggaaaag 32427963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 8032726 - 8032823
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaa-gagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||||||||| |||||||||| ||||| |  | ||||| || ||||||||| |||| || |||||||||| | |||||||||||||||    
T  8032726 aagttttataggaagatgtaaaaacaatttttattggttgctagttattgagaaaatgaaaggagagagcaaattgaatgcattttgcatttaatttt 8032823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 236
Target Start/End: Complemental strand, 38071154 - 38071002
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    ||||||||||||||||||   | |||| |  ||||||||||||||  |||||  || |||||||| ||||||||||| ||||||||||||||||   |||    
T  38071154 ttaagaaaactaaaacatggtagtttgtaacatagttttttgtgttatctttgaaataagttttacaggaagatgtaaaaacaattttcattggtagttg 38071055  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
     |||| || ||||||||| | | || |||||||||| | ||| |||||||||||    
T  38071054 attatagagaaaatgaaa-atagagcaaattgaatgcactttacatttaatttt 38071002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 236
Target Start/End: Complemental strand, 44442286 - 44442137
Alignment:
Q  88 aaaactaaaacataagaatttggagtatagttt-tttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggtta 186  Q
    ||||||||||||||| | |||| |  ||||||| |||||||  | |||| || || ||||||| ||||||||| |||||||||||||||    ||| |||    
T  44442286 aaaactaaaacataatagtttgtaacatagtttatttgtgttatttttaaaataaattttatatgaagatgtaaaaacaattttcattgatagttgatta 44442187  T
Q  187 tggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    | || ||||||||| ||| || |||||||||| | |||||||||||||||    
T  44442186 tagagaaaatgaaaaagatagcaaattgaatgcactttgcatttaatttt 44442137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 4707558 - 4707482
Alignment:
Q  105 atttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctatt 181  Q
    ||||||||||||||||||||||| ||| |||||| |||||| |  |||||||||  |||||||||||||||| ||||    
T  4707558 atttggagtatagttttttgtgttttccttagaataagtttaacgggaagatgttaaaacaattttcattggttatt 4707482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 11030978 - 11031077
Alignment:
Q  130 tctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatt 229  Q
    |||||| || ||||||||||| ||||| || ||||||||||       |||||||||| || ||||||||||||| || |||||||||| | ||||||||    
T  11030978 tctttaaaataagttttatagaaagatataaaaacaatttt-------tattggttattgagaaaatgaaagagagagcaaattgaatgcactttgcatt 11031070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 18833902 - 18834065
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgt-attctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| |||||||| |||||| ||   ||||||  ||||| |||||||||| ||||||  ||| |||||| || | |||||||| |||||||| |||    
T  18833902 tcacacttattaagaaagctaaaatattgtaatttgaggtataattttttgtgttattcttg-gaataagtttcatggaaagatgtaaaaacaattatca 18834000  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    |||| || |  ||||||| ||||| |||  || |  |||||||||| ||||||||||||||||||    
T  18834001 ttggttaattattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 18834065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 4891630 - 4891793
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagtttttt-gtgtattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    ||||| || ||||||||||||||| |||  | |||| |  |||||||||| ||||  |||||  || |||||||||||||||||||| |||||||||| |    
T  4891630 tcacatttattaagaaaactaaaatatagtagtttgtaacatagtttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttta 4891729  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||||   ||| ||||  | ||||||||| ||| || | |||||||| | ||| |||||||||||    
T  4891730 ttggtagttgattataaagaaaatgaaaaagagagcagattgaatgcactttacatttaatttt 4891793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 5280536 - 5280595
Alignment:
Q  88 aaaactaaaacataagaatttggagtatag-ttttttgtgtattctttagaaaaagtttt 146  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||  |||||||||||    
T  5280536 aaaactaaaacataagaatttggactatagtttttttgtgttttcttgggaaaaagtttt 5280595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 20380251 - 20380129
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaatt 213  Q
    ||||||||||||||  |||||  || |||||||||||||| ||||| ||| ||  ||||||||   ||| |||| || |||||||||  || || |||||    
T  20380251 atagttttttgtgttatctttgaaataagttttataggaaaatgtaaaaaaaaaattcattggtagttgattatagagaaaatgaaaacgagagcaaatt 20380152  T
Q  214 gaatgtaatttgcatttaatttt 236  Q
    ||||| | |||||||||||||||    
T  20380151 gaatgcactttgcatttaatttt 20380129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 23987141 - 23987189
Alignment:
Q  206 agaaaattgaatgtaatttgcatttaattttataagaataaacaaaagt 254  Q
    |||| |||||||  ||||| |||||||||||||||||||||||||||||    
T  23987141 agaagattgaattcaatttacatttaattttataagaataaacaaaagt 23987189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 32428133 - 32428029
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtg-tattctttagaaaaagttttataggaagatgtagaaacaattttcattggctatt 181  Q
    |||| |||||||||||||||||||||||||||||||  || ||| | || |||| || |||||| || | || ||||| ||| ||||||||||| |||||    
T  32428133 ttaaaaaaactaaaacataagaatttggagtatagtccttggtgtttttttttataataagtttcatggaaacatgtaaaaataattttcattgactatt 32428034  T
Q  182 ggtta 186  Q
    | |||    
T  32428033 gatta 32428029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 175
Target Start/End: Original strand, 16494984 - 16495019
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||||||||||||||||| |||||||||||||||    
T  16494984 aagttttataggaagatgtaaaaacaattttcattg 16495019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 11825351 - 11825385
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaattt 108  Q
    |||||||| ||||||||||||||||||||||||||    
T  11825351 tcacacttattaagaaaactaaaacataagaattt 11825385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 43075836 - 43075751
Alignment:
Q  152 aagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    |||||||| ||| |||||||||||| ||    ||||||| ||||| |||  ||||  |||||||||| ||||||||||||||||||    
T  43075836 aagatgtaaaaataattttcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcatttaatttta 43075751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 74 - 263
Target Start/End: Original strand, 14752160 - 14752349
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| || ||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||  |||||||||||||||| |||||||||||||    
T  14752160 tcacacttatttagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaaaatttataggaagatgtaaaaacaattttcat 14752259  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  14752260 tgactattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaagaaaagtttttcttgg 14752349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 74 - 261
Target Start/End: Complemental strand, 28875578 - 28875391
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||||||||||||| |||||||||||||| ||||||| ||||||| |||||| |||||||||||||| ||||||||| |||||||||||||    
T  28875578 tcacatttattaagaaaactaaagcataagaatttggactatagttatttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcat 28875479  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  28875478 tggctattggttatggagaaaatgaaagaaaaagaaaattgaatgtaatttgtatttaattttatgagaataaacaaaagtttttctt 28875391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 74 - 262
Target Start/End: Complemental strand, 6075253 - 6075065
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||  |||||||||||||||||| |||||||||| |||||| |||||||| ||| ||||||| ||| |||||||||||||    
T  6075253 tcacacttattaagaaaactaaagtataagaatttggagtataattttttgtgttttctttggaaaaagtgttacaggaagaagtaaaaacaattttcat 6075154  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6075153 tggccattggttatgcaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaagtttttcttg 6075065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 74 - 262
Target Start/End: Original strand, 7866435 - 7866623
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||| | | ||||||  ||||||||||||| ||||||||| |||||||||||||    
T  7866435 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttttattttctttgaaaaaagttttataagaagatgtaaaaacaattttcat 7866534  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    || |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  7866535 tgactattggttatggaaaaaataaaagagatagaaaattgaatgtaattttcatttaattttatgagaataaacaaaagtttttcttg 7866623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 37042369 - 37042541
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||| || |||||||||||||||||||||||| |||||||||||||    
T  37042369 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttcgttggaaaaagttttataggaagatgtaaaaacaattttcat 37042468  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  37042469 tggctattgattatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 37042541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 74 - 261
Target Start/End: Complemental strand, 35963324 - 35963137
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||| | |||||||||| ||    
T  35963324 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttgtttggaaaaagttttataggaagatggaaaaacaatttttat 35963225  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
    ||| ||||||||||||| ||||||||||||| |||||||| |||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  35963224 tggttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaacaaaagtatttctt 35963137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 46711610 - 46711803
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||| ||||||||||||||||||||||| |||||||||| ||||||  ||||||||||||||||||||||| ||||||| |||||    
T  46711610 tcacacttattaagaaaacgaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatattcat 46711709  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||||||||| |||||||||||||||| ||||| |||||||||||||| |||||||||||| | |||||||||||||||||||||| ||||    
T  46711710 tggctattggttat-gaaaaaatgaaagagagagaaatttgaatgtaatttgtatttaattttatgaaaataaacaaaagtttttcttggaaaag 46711803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 74 - 267
Target Start/End: Original strand, 54464848 - 54465040
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||||||||||||||||||| |||||| |||||||||| ||||||| |||||  || ||||||||||||| ||||||||||| |    
T  54464848 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttaaaaaaaaatt-ataggaagatgtaaaaacaattttcgt 54464946  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaa 267  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  54464947 tggctattggttatggaaaaagtgaaagagagagaaaattgaatgtaatttgcgtttaattttatgagaataaacaaaagtttttcttgggaaa 54465040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 579097 - 579284
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||       |||||||||| ||||||  |||||||||||||||||||| || |||||||||||||    
T  579097 tcacacttattaagaaaactaaaacataagaatttgg-------ttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcat 579189  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||    
T  579190 tggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagattaaacaaaagtttttcttggaaaag 579284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 50650989 - 50651166
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||| | ||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||    
T  50650989 tcacacttattaagaaaactaaaacataagaatttgaaatatagttttttgtgttttctttgcaaaaagttttataggaagatgtaaaaacaattttcat 50651088  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaa 251  Q
    || |||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  50651089 tgactattggttatggagaaaataaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataatcaaa 50651166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 36546714 - 36546536
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||||||| | |||||| |||||||||| ||||||||||||| || ||||||||||    
T  36546714 tcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttcat 36546615  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||||||    
T  36546614 tggctattggttatagaaaaaatgaaagagagagagaatttaatgtaatttgcatttaattttatgagaataaacaaaa 36546536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 36561601 - 36561779
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||||||| | |||||| |||||||||| ||||||||||||| || ||||||||||    
T  36561601 tcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttcat 36561700  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||||||    
T  36561701 tggctattggttatagaaaaaatgaaagagagagagaatttaatgtaatttgcatttaattttatgagaataaacaaaa 36561779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 47864363 - 47864185
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||||||||||||||||| |||||||||||||||||||||||  | ||||||  ||||||||||||||||||||||| |||||||||||||    
T  47864363 tcacatttattaagaaaactaaaacatgagaatttggagtatagttttttgcattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 47864264  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    || |||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  47864263 tgactattgattatgaaaaaaatgaaagagagaaaaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 47864185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 78 - 246
Target Start/End: Original strand, 11054267 - 11054432
Alignment:
Q  78 acttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaa-agttttataggaagatgtagaaacaattttcattgg 176  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| || ||||||||||||||||    
T  11054267 acttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatttaaaaacaattttcattgg 11054366  T
Q  177 ctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||| |||||||    
T  11054367 ctattggttatggaaaaaatgaaag----agaaaattgaatgtaatttgcatttaattttatgagaataa 11054432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 23311554 - 23311717
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||| ||||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  23311554 ttaagaaaactaaaacataaaaatttagagtatagttttgtgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggctattg 23311653  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    |||||||||||||||||||| | ||||||||||||||||| | ||||||||||||| |||||||    
T  23311654 gttatggaaaaaatgaaagaaagagaaaattgaatgtaatatacatttaattttatgagaataa 23311717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 30189743 - 30189570
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||    
T  30189743 tcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 30189644  T
Q  174 tggctattggttatggaa-aaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    |||||||||||||||||| ||||||||||| | |||| |||||||||||||| ||||||||||||  |||||||    
T  30189643 tggctattggttatggaaaaaaatgaaagaaagagaatattgaatgtaatttacatttaattttacgagaataa 30189570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 78 - 252
Target Start/End: Complemental strand, 37075128 - 37074952
Alignment:
Q  78 acttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggc 177  Q
    |||| |||| |||||||||||||||||||||| |||||| |||||||||| |||||| |||||||||||||||||||||||| | |||||||||||||||    
T  37075128 acttattaaaaaaactaaaacataagaatttgaagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaacacaattttcattggc 37075029  T
Q  178 tattggttatggaaaaaatg--aaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||||| |||||||||  ||||||  | ||||||||||||||||||||||||||||||| |||||||||||||    
T  37075028 tattggttatagaaaaaatgaaaaagagcgataaaattgaatgtaatttgcatttaattttatgagaataaacaaaa 37074952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 100 - 252
Target Start/End: Complemental strand, 6438229 - 6438077
Alignment:
Q  100 taagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaa 199  Q
    |||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  6438229 taagaatttggagtatagttttttgtgttttctttgaaaaaagctttataggaagatgtaaaaacaattttcattggctattggttatggagaaaatgaa 6438130  T
Q  200 agagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||| | |||||| |||||||||||||||||||||||| |||||||||||||    
T  6438129 agagagataaaattaaatgtaatttgcatttaattttatgagaataaacaaaa 6438077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 29235359 - 29235187
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| |||| ||||||||||||| ||| |||||||||    
T  29235359 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtattttctttagaaaacgtttaataggaagatgtaaaaataattttcat 29235260  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||||||||||||||||      ||||||||||||||| |||||||||| || | |||||||||||    
T  29235259 tggctattggttatggaaaaaatgaaagag------aattgaatgtaatttacatttaatttaatgataataaacaaaa 29235187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 74 - 262
Target Start/End: Original strand, 41476287 - 41476469
Alignment:
Q  74 tcacacttgttaagaaaactaaaa-cataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||  |||||||||||||| |||||||| ||| ||||||||    
T  41476287 tcacacttattaagaaaactaaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttca 41476386  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    |||||       || |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  41476387 ttggc-------tagggaaaaaatgaaagggaaagaaaattgaatctaatttgcatttaattttatgagaataaacaaaagtttttcttg 41476469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 75 - 262
Target Start/End: Complemental strand, 19464248 - 19464059
Alignment:
Q  75 cacacttgttaagaaaactaaaacataagaatttggagtata--gttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    ||||||| |||| |||||||||||||||||||||||||||||  ||||||||||| ||||||  ||||||||||||||||||||  | ||||||||||||    
T  19464248 cacacttattaacaaaactaaaacataagaatttggagtatatagttttttgtgttttctttgaaaaaagttttataggaagattgaaaaacaattttca 19464149  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    ||   |||||||||||| |||||||||||||| | ||| ||||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  19464148 tttattattggttatgggaaaaatgaaagagagaaaaagttgaatgtaatttgcatttcagtttatgagaataaacaaaagtttttcttg 19464059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 53270406 - 53270227
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||  ||||||||| |||| |||||||||||||||||||||||||||||| ||||||  ||||||||| |||| |||||| | ||| |||||||||    
T  53270406 tcacactcattaagaaaattaaa-cataagaatttggagtatagttttttgtgttttctttgaaaaaagtttcatagaaagatgaaaaaataattttcat 53270308  T
Q  174 tggctattggttatggaaaaaatgaaa--gagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    || ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  53270307 tgcctattggttatggaaaaaatgaaagagagaaagaaaattgaatgtaatttgtatttaattttatgagaataaacaaaa 53270227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 74 - 250
Target Start/End: Complemental strand, 8703277 - 8703105
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||| |||| || ||| ||||||  |||||||||||||||| ||||||||| |||    
T  8703277 tcacacttattaaaaaaactaaaacataagaatttggagtatagttttt-gtgtgtt-tttggaaaaaaatttataggaagatgtaaaaacaattt-cat 8703181  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaa 250  Q
    ||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  8703180 tggctattgattatggaaaaa-tgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataaacaa 8703105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 74 - 250
Target Start/End: Complemental strand, 9055164 - 9054992
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||| |||| || ||| ||||||  |||||||||||||||| ||||||||| |||    
T  9055164 tcacacttattaaaaaaactaaaacataagaatttggagtatagttttt-gtgtgtt-tttggaaaaaaatttataggaagatgtaaaaacaattt-cat 9055068  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaa 250  Q
    ||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  9055067 tggctattgattatggaaaaa-tgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataaacaa 9054992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 2927462 - 2927267
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagtttttt-gtgtattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    ||||| || ||||||||||||||||||||||||||| || |||||||||| || | |||||| ||| ||||||||| |||||||||| ||| ||||||||    
T  2927462 tcacatttattaagaaaactaaaacataagaatttgtagcatagtttttttgtattttctttggaataagttttatgggaagatgtaaaaataattttca 2927363  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||||||||||| |||||||  |||||| |||||||| ||||||||||| ||||||||| || ||||||| ||||||||||| |||| ||||    
T  2927362 ttggctattggttatgaaaaaaatagaagagagagaaaattaaatgtaatttgtatttaatttcatgagaataagcaaaagtttttattggaaaag 2927267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 50730281 - 50730103
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagtttttt-gtgtattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||||| ||| ||  | ||    
T  50730281 tcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaaaaaaat-ca 50730183  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||| |||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||  |||||||||||||    
T  50730182 ttgactattggttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaattttaagagaataaacaaaa 50730103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 50782573 - 50782751
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagtttttt-gtgtattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||||| ||| ||  | ||    
T  50782573 tcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaaaaaaat-ca 50782671  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||| |||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||  |||||||||||||    
T  50782672 ttgactattggttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaattttaagagaataaacaaaa 50782751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 74 - 262
Target Start/End: Complemental strand, 26208186 - 26207998
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||| || | | ||| |||||| || | |||||||| |||||||||||||    
T  26208186 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttgtctggaataagtttcatggtaagatgtaaaaacaattttcat 26208087  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    ||||||||  || |||| |||||| |||| | |||||||||||||||||| |||||| | ||||| ||||||| |||||||||||||||    
T  26208086 tggctatttattgtggagaaaatggaagaaagagaaaattgaatgtaattggcatttgaatttatgagaataagcaaaagtttttcttg 26207998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 74 - 262
Target Start/End: Original strand, 20847222 - 20847408
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| ||||||| |||| |||||||||||||||||||||||| ||||| |||| |||||| ||| |||||| ||||||||||||  |||||||||||||    
T  20847222 tcacaattgttaa-aaaattaaaacataagaatttggagtataattttt-gtgttttctttggaataagtttcataggaagatgtgcaaacaattttcat 20847319  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    |||  |||| ||||||| |||||||||||||   ||||||||||||||||||||||||||||||| ||||||   ||||||||||||||    
T  20847320 tggtaattgattatggagaaaatgaaagagaggaaaaattgaatgtaatttgcatttaattttatgagaatatgtaaaagtttttcttg 20847408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 78 - 261
Target Start/End: Original strand, 26724947 - 26725130
Alignment:
Q  78 acttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggc 177  Q
    |||| ||||||||||||||| ||||||||||| |||||| |||||||||| |||||| ||| ||||||| |  ||||||||| ||||||||||||||||     
T  26724947 acttattaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttggaataagttttctgagaagatgtaaaaacaattttcattggt 26725046  T
Q  178 tattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
    ||||| ||||||| |||||  |||||| | |||| |||||||||||||||| |||||| || |||||||| |||||||||||||    
T  26725047 tattgattatggagaaaatagaagagagataaaactgaatgtaatttgcatataatttcatgagaataaataaaagtttttctt 26725130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 252
Target Start/End: Original strand, 32619790 - 32619960
Alignment:
Q  83 ttaagaaaactaa-aacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctatt 181  Q
    ||||||||||||  ||||| ||||||||||||||| | |||||||| |||||| ||| | |||||||| ||||||||| ||| |||||||||||||||||    
T  32619790 ttaagaaaactatgaacatgagaatttggagtataatattttgtgttttctttggaataggttttataagaagatgtaaaaataattttcattggctatt 32619889  T
Q  182 ggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||| ||| ||  | ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  32619890 ggttatggagaaattgggatagagagaaaattgaatgtaatttgcatttaattttattagaataaacaaaa 32619960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 74 - 193
Target Start/End: Original strand, 23910465 - 23910584
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| |||||||||||||||| |||||||| ||||||||| ||||||  ||||||||||||||||||||||| ||| |||||||||    
T  23910465 tcacacttattaagaaaattaaaacataagaatttagagtatagctttttgtgttttctttgtaaaaagttttataggaagatgtaaaaataattttcat 23910564  T
Q  174 tggctattggttatggaaaa 193  Q
    ||||||||||||||||||||    
T  23910565 tggctattggttatggaaaa 23910584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 74 - 204
Target Start/End: Complemental strand, 31837091 - 31836961
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||| | |||||| |||||||||||||||||| ||| | |||||||||||||    
T  31837091 tcacacttattaagaaaactaaaacataagaagttggagtatagttttttgtattttctttggaaaaagttttataggaatatgcaaaaacaattttcat 31836992  T
Q  174 tggctattggttatggaaaaaatgaaagaga 204  Q
    || ||||||||| |||| |||||||| ||||    
T  31836991 tgactattggttgtggagaaaatgaatgaga 31836961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 74 - 187
Target Start/End: Complemental strand, 9264723 - 9264610
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||||||||| ||||||  ||||||||||||| ||||||||| |||||||||||||    
T  9264723 tcacacttattaagaaaactaaaacatatgaattttgagtatagttttttgtgttttctttgaaaaaagttttatatgaagatgtaaaaacaattttcat 9264624  T
Q  174 tggctattggttat 187  Q
    |||||||| |||||    
T  9264623 tggctattcgttat 9264610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 34722623 - 34722721
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttat 238  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||  || ||||||||||||||||||| |||||||||||||    
T  34722623 aagttttataagaagatgtaaaaacaattttcattggctattggttatgcaaaaaatgaaaaggagagaaaattgaatgtaatttacatttaattttat 34722721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 33974614 - 33974698
Alignment:
Q  177 ctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| | ||||||    
T  33974614 ctattggttatggaaaaaatgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataaacaaaaatctttctt 33974698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 152 - 262
Target Start/End: Complemental strand, 6752764 - 6752654
Alignment:
Q  152 aagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaa 251  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| |||||| || ||| ||||||||||||||||||||||| || | ||||| ||||    
T  6752764 aagatgtaaaaacaattttaattggctattggttatggagaaaatggaagagagaggaaaatgaatgtaatttgcatttaatttcatgaaaataagcaaa 6752665  T
Q  252 agtttttcttg 262  Q
    |||||||||||    
T  6752664 agtttttcttg 6752654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 8096970 - 8097132
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||  | |||| |  ||||||| ||||||  || ||  || |||||||||||||||||||| ||| |||||||||    
T  8096970 tcacacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaataattttcat 8097069  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||| ||||| |||| || ||||||||||||| || |||||||||| | |||||||||||||||    
T  8097070 tggttattgcttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 8097132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 46557244 - 46557342
Alignment:
Q  165 aattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||| |||||||||| || ||||||| ||||||||||| ||||    
T  46557244 aattttcattggctattagttatggaaaaaatgaaagagagagaaaattaaatgtaatttacatttaatttcatgagaataagcaaaagtttttattgg 46557342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 3972402 - 3972275
Alignment:
Q  118 ttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaat 217  Q
    |||||||||| |||||| ||| ||||||||| |||||||||| |||||||||||||| ||||||||||| | | |||||| |||||| |  |||||||||    
T  3972402 ttttttgtgttttcttt-gaataagttttatgggaagatgtaaaaacaattttcattagctattggttaggaagaaaatggaagagagaacaaattgaat 3972304  T
Q  218 gtaatttgcatttaattttataagaataa 246  Q
    |||||||||||||||||| || |||||||    
T  3972303 gtaatttgcatttaatttcatgagaataa 3972275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 3997476 - 3997603
Alignment:
Q  118 ttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaat 217  Q
    |||||||||| |||||| ||| ||||||||| |||||||||| |||||||||||||| ||||||||||| | | |||||| |||||| |  |||||||||    
T  3997476 ttttttgtgttttcttt-gaataagttttatgggaagatgtaaaaacaattttcattagctattggttaggaagaaaatggaagagagaacaaattgaat 3997574  T
Q  218 gtaatttgcatttaattttataagaataa 246  Q
    |||||||||||||||||| || |||||||    
T  3997575 gtaatttgcatttaatttcatgagaataa 3997603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 38674955 - 38674853
Alignment:
Q  161 aaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttct 260  Q
    ||||||||||||||| |||||| ||||| | ||||||||||||| |||||||||||| ||||||| ||||||||| |||||||||| | |||||||||||    
T  38674955 aaacaattttcattgactattgattatgaagaaaatgaaagagagagaaaattgaatctaatttgtatttaatttcataagaataagctaaagtttttct 38674856  T
Q  261 tgg 263  Q
    |||    
T  38674855 tgg 38674853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 47116021 - 47115843
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||| ||||||||||||||||||||| ||||||| |||||||||| |  ||||||| || |||||| | |||||||| || |||||||| |    
T  47116021 tcacatttattaaaaaaactaaaacataagaatttagagtataattttttgtgtttgttttagaataaattttatggaaagatgtaaaagcaattttctt 47115922  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||| ||||| ||||||| |||||| || | | |||||||| |||| |||||  ||||||||| || ||||||| |||||    
T  47115921 tggttattgattatggataaaatggaaaaaagagaaaattaaatgaaatttatatttaatttcatgagaataagcaaaa 47115843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 16033005 - 16033094
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatt 229  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||| | ||||||||    
T  16033005 aagttttataggaagatgtaaaaacaattttcattggttattagttattgaaaaaatgaaagagaaagcaaattgaatgcactttgcatt 16033094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 34194988 - 34194892
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||||||||| || ||| |||||| | |||||||||||||||    
T  34194988 aagttttataggaagatgtaaaaacaattttcattggttattggttattgagaaaatgaaagagagagcaaactgaatgcactttgcatttaatttt 34194892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 77 - 236
Target Start/End: Original strand, 22479009 - 22479168
Alignment:
Q  77 cacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattgg 176  Q
    ||||| |||||||||||||||||||  | |||| |  ||||||||||||||  |||||  || |||||||||||||||||||| ||||| ||||||||||    
T  22479009 cacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacacttttcattgg 22479108  T
Q  177 ctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
       ||| |||| || ||||||||| ||| || |||||||||| | |||||||||||||||    
T  22479109 tagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 22479168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 84 - 236
Target Start/End: Original strand, 30454687 - 30454838
Alignment:
Q  84 taagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattgg 183  Q
    ||||||||||||||||||  | |||| |  ||||||| ||||||  || ||  || ||||||||||| |||||||| |||||||||| ||||| ||||||    
T  30454687 taagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttatagaaagatgtaaaaacaatttt-attggttattgg 30454785  T
Q  184 ttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||| || ||||||||||||| || |||||||||| | |||||||||||||||    
T  30454786 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 30454838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 74 - 182
Target Start/End: Original strand, 33973518 - 33973627
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatag-ttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    |||||||| |||| |||||||||| |||| |||||||||||||| |||||||||| ||||||| |||||||||||||| |||| ||  ||| ||||||||    
T  33973518 tcacacttattaacaaaactaaaatataaaaatttggagtatagtttttttgtgttttctttaaaaaaagttttatagaaagacgtcaaaataattttca 33973617  T
Q  173 ttggctattg 182  Q
     |||||||||    
T  33973618 gtggctattg 33973627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 47866941 - 47867026
Alignment:
Q  150 ggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattt 235  Q
    |||| ||||| |||| ||||||||||||||||| ||||||| ||| || |||||| ||||||||||||||||||||||||||||||    
T  47866941 ggaatatgtaaaaaccattttcattggctattgattatggagaaagtggaagagagagaaaattgaatgtaatttgcatttaattt 47867026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 7886573 - 7886731
Alignment:
Q  78 acttgttaagaaaactaaaacataagaatttggagtatagttttttgtgt-attctttagaaaaagttttataggaagatgtagaaacaattttcattgg 176  Q
    |||| |||||||||||||||||||  | ||||    ||||||| |||||| |||||| | | ||| |||||||| |||||||| ||||||||||||||||    
T  7886573 acttattaagaaaactaaaacatagtagtttgtgacatagtttcttgtgttattcttgaaataaa-ttttatagaaagatgtaaaaacaattttcattgg 7886671  T
Q  177 ctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
     |||| ||||| || ||||||||||||| || |||||||||| | ||||||||| |||||    
T  7886672 ttattagttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttgatttt 7886731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 10115077 - 10114915
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||  | |||| |  ||| |||||||| |  |||||  || |||||||||||||||||||| |||||||||||||    
T  10115077 tcacacttattaagaaaactaaaacatagtagtttgtaacataattttttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10114978  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||   ||| |||| || ||||||||| | | || |||||||||| | ||||| |||||||||    
T  10114977 tggtagttgattatagagaaaatgaaaaatagagcaaattgaatgcactttgcttttaatttt 10114915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 46918205 - 46918327
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaatt 213  Q
    ||||||| ||||||  || ||| || ||||||||||||||||| || |||||||||||||||| |||||||||| || |||||||||||||  | ||||     
T  46918205 atagtttcttgtgttatccttaaaataagttttataggaagatctaaaaacaattttcattggttattggttattgagaaaatgaaagagagtgcaaatg 46918304  T
Q  214 gaatgtaatttgcatttaatttt 236  Q
    ||||| | |||||| ||||||||    
T  46918305 gaatgcactttgcacttaatttt 46918327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 48802548 - 48802610
Alignment:
Q  190 aaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||    
T  48802548 aaaaaatgaaagagagagaaaattgaatgtaatttgcatttacttttatgagaataaacaaaa 48802610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 3084135 - 3084256
Alignment:
Q  77 cacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattgg 176  Q
    ||||| ||||||||||||||| || |||||||| |||||| ||| ||||||  || ||| ||  |||||||| |||||||||| ||||||| ||||||||    
T  3084135 cactttttaagaaaactaaaatatgagaatttgaagtataatttcttgtgtcctccttaaaattagttttatgggaagatgtaaaaacaatattcattgg 3084234  T
Q  177 ctattggttatggaaaaaatga 198  Q
     |||| |||||||| |||||||    
T  3084235 ttatttgttatggagaaaatga 3084256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 22455969 - 22456122
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||||||||||||||||||  | |||| |  ||||||||||||||   ||||  || ||||||||||||||||| || |||||||||| |||||   |||    
T  22455969 ttaagaaaactaaaacatagtagtttgtaacatagttttttgtgttaactttgaaataagttttataggaagatataaaaacaattttgattggtagttg 22456068  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
     |||| || ||||||||| ||| || |||||||||| | |||||||||||||||    
T  22456069 attatagagaaaatgaaaaagagagcaaattgaatgcattttgcatttaatttt 22456122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 38401550 - 38401384
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggag----tatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattt 169  Q
    |||||||| |||||||||||||||||||  | |||| |     |||||||||||||||  |||||  || |||||||||||| ||||||| ||| |||||    
T  38401550 tcacacttattaagaaaactaaaacatagtagtttgtaacatatatagttttttgtgttatctttgaaataagttttatagggagatgtaaaaataattt 38401451  T
Q  170 tcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||   ||  |||| || ||||||||| ||| |||||||| |||||| |||||||||||||||    
T  38401450 tcattggtagttaattatagagaaaatgaaaaagagagaaaattaaatgtactttgcatttaatttt 38401384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 8769531 - 8769651
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||||| |||| || |||  |||||| || || ||||| |||| ||| |||||| ||    
T  8769531 tcacacttattaagaaaactaaaacataacaattaggagtatagtttttggtgtttttttt--aaaaagattcatgggaagttgtaaaaataatttttat 8769628  T
Q  174 tggctattggttatggaaaaaat 196  Q
    |||||| || ||||||| |||||    
T  8769629 tggctaatgattatggagaaaat 8769651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 10252177 - 10252015
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||  | |||| |  ||| || ||||| |  |||||  || |||||||||||||||||||| |||||||||||||    
T  10252177 tcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10252078  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||   ||| |||| || ||||||||| | | || |||||||||| | ||||| |||||||||    
T  10252077 tggtagttgattatagagaaaatgaaaaatagagcaaattgaatgcactttgcttttaatttt 10252015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 47443935 - 47444087
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||||||||||||||||||  | |||| |  ||||||||||||||  |||||  || || |||||||| |||||||| |||||||||||| |||   |||    
T  47443935 ttaagaaaactaaaacatattagtttgtaacatagttttttgtgttatctttgaaataaattttatag-aagatgtaaaaacaattttcactggtagttg 47444033  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
     |||| || ||||||||| ||| || |||||||||| | |||||||||||||||    
T  47444034 attatagagaaaatgaaaaagatagcaaattgaatgcactttgcatttaatttt 47444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 10014435 - 10014273
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||  | |||| |  ||| || ||||| |  |||||  || |||||||||||||||||||| |||||||||||||    
T  10014435 tcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10014336  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||   ||| |||| || ||||| ||| | | || |||||||||| | ||||| |||||||||    
T  10014335 tggtagttgattatagagaaaataaaaaatagagtaaattgaatgcactttgcttttaatttt 10014273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 21214367 - 21214245
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaatt 213  Q
    ||||||||||||||  | |||  || ||||||||||| |||||||| ||||||||||||||||   ||| |||| || ||||| ||| ||| || |||||    
T  21214367 atagttttttgtgttatttttgaaataagttttatagaaagatgtaaaaacaattttcattggtagttgattattgagaaaataaaaaagagagcaaatt 21214268  T
Q  214 gaatgtaatttgcatttaatttt 236  Q
    ||||| | |||||||||||||||    
T  21214267 gaatgcactttgcatttaatttt 21214245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 9264071 - 9264002
Alignment:
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||| ||| ||||||||||||| | ||||||  ||||||||||||||||||||||| |||||||||||||    
T  9264071 gttacggagaaaatgaaagagagataaaattagatgtaatttgcatttaattttatgagaataaacaaaa 9264002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 25242130 - 25242227
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttc 171  Q
    |||||||| |||||||||||||||||||  | |||| |  ||||||||||||||  |||||| || ||||||||||| |||||| | |||||||||||    
T  25242130 tcacacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttaaaataagttttatagaaagatgaaaaaacaattttc 25242227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 8764631 - 8764744
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||| ||||||||||||||| |||| ||||||||| ||||||||| || |||| |||||  || || ||||| |||| ||| |||||| ||    
T  8764631 tcacacttattaaaaaaactaaaacataacaattaggagtatagctttttgtgttttttttaaaaaaa--ttcatgggaagttgtaaaaataatttttat 8764728  T
Q  174 tggctattggttatgg 189  Q
    |||||| || ||||||    
T  8764729 tggctaatgattatgg 8764744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 2994367 - 2994532
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtg-tattctttagaaaaagttttat----aggaagatgtagaaacaatt 168  Q
    |||||||| ||||||||||||||| |||  | |||| |  ||||||||||||| ||| ||| | || |||||||||    ||||||||||| ||||||||    
T  2994367 tcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgttatgcttga-aataagttttataggaaggaagatgta-aaacaatt 2994464  T
Q  169 ttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||||||||   ||| |||| || ||||||||| ||| || |||||||||| | |||||||||||||||    
T  2994465 ttcattggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 2994532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 23910580 - 23910625
Alignment:
Q  207 gaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||    
T  23910580 gaaaattgaatgtaatttgcatttaattatatgagaataaacaaaa 23910625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 48291931 - 48291826
Alignment:
Q  131 ctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcattt 230  Q
    ||||| || ||||||||||||||| |||| ||| ||||||||||||   ||| |||  |||||||||||| ||| || |||||||||| | ||| |||||    
T  48291931 ctttaaaataagttttataggaaggtgtaaaaataattttcattggtagttgattacagaaaaaatgaaaaagagagcaaattgaatgcactttccattt 48291832  T
Q  231 aatttt 236  Q
    ||||||    
T  48291831 aatttt 48291826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 41936195 - 41936335
Alignment:
Q  119 tttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatg 218  Q
    ||||||||| || ||||||| |||||| || |||||||||| || ||||||| |||||       ||||||| ||||||  |||||  ||||||||||||    
T  41936195 tttttgtgttttatttagaataagtttcatgggaagatgtaaaatcaattttaattgg-------ttatggagaaaatgggagaga--gaaaattgaatg 41936285  T
Q  219 taatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
     |||||||||||| ||| || |||||||  |||||||||| |||| ||||    
T  41936286 caatttgcatttagtttcatgagaataagtaaaagtttttattggaaaag 41936335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 46557122 - 46557219
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatag-ttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttc 171  Q
    ||||| || |||||||||||||| |||||||||||  |  |||| |||||||||| |||||||||| |||||| || |||||||||| ||| |||||||    
T  46557122 tcacatttattaagaaaactaaagcataagaattt-tatcatagtttttttgtgttttctttagaataagtttcatgggaagatgtaaaaataattttc 46557219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 54725628 - 54725670
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||||||||||||||||||| |||||||||||||||| |||||    
T  54725628 aagttttataggaagatgtaaaaacaattttcattggttattg 54725670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 34722600 - 34722567
Alignment:
Q  205 aagaaaattgaatgtaatttgcatttaattttat 238  Q
    ||||||||||||||||||||||||||||||||||    
T  34722600 aagaaaattgaatgtaatttgcatttaattttat 34722567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 47866876 - 47866921
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagtt 119  Q
    |||||||| |||| || |||||||||||||||||||||||||||||    
T  47866876 tcacacttattaaaaagactaaaacataagaatttggagtatagtt 47866921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 17587862 - 17587779
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgt-attctttagaaaaagttttataggaagatgtagaaacaa 166  Q
    |||||||||||||||||||  |||||| | |||||||| || ||| |||||| | || |||||||||||||||||||| ||||||    
T  17587862 ttaagaaaactaaaacatagtaatttgcaatatagtttcttttgttattcttga-aataagttttataggaagatgtaaaaacaa 17587779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 31181066 - 31181015
Alignment:
Q  207 gaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    ||||||| |||||||||| |||||||||| || |||||| ||||||||||||    
T  31181066 gaaaattaaatgtaatttacatttaatttcatgagaatagacaaaagttttt 31181015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 30612343 - 30612221
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||| |||| |||  |||||    |||| |||||| |||  |||||| ||  ||||| |||| |||||||| |||||||| ||||    
T  30612343 tcacacttattaagaaaacaaaaatatagtaatttaagatataattttttatgttctctttaaaatgagtttcatagaaagatgtaaaaacaattctcat 30612244  T
Q  174 tggctattggttatggaaaaaat 196  Q
    ||| || || |||||||||||||    
T  30612243 tggttaatgattatggaaaaaat 30612221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 36151077 - 36150967
Alignment:
Q  88 aaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaa-acaattttcattggctattggtta 186  Q
    ||||||||||| ||  ||||| |||| ||||||||||  | ||  |||||| ||||||||| |||||||||| || | |||||| ||||| ||||| |||    
T  36151077 aaaactaaaacctagtaatttcgagtgtagttttttgcttttttcttagaataagttttatgggaagatgtaaaacataatttttattggttattgatta 36150978  T
Q  187 tggaaaaaatg 197  Q
    |||| ||||||    
T  36150977 tggagaaaatg 36150967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 27875882 - 27875935
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgt 127  Q
    |||||||||||||||||||||||||||   | |||| |||||||||||| ||||    
T  27875882 tcacacttgttaagaaaactaaaacattgtagtttgtagtatagtttttggtgt 27875935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 187
Target Start/End: Complemental strand, 31292777 - 31292664
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| || | |||||||||||||   |||||| |||||| ||| || |||  || || |||  |||| ||| |||||||||| |||||||||||||    
T  31292777 tcacacttattgaaaaaactaaaacatggtaatttgaagtataatttcttttgttctccttggaattagttctatgggaagatgtaaaaacaattttcat 31292678  T
Q  174 tggctattggttat 187  Q
    ||| |||| |||||    
T  31292677 tggttatttgttat 31292664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 6784450 - 6784390
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcatt 174  Q
    ||||||||||||||  |||||  || || ||||||||||||||||| ||| ||||||||||    
T  6784450 atagttttttgtgttatctttcaaataaattttataggaagatgtaaaaataattttcatt 6784390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 237
Target Start/End: Complemental strand, 51426649 - 51426621
Alignment:
Q  209 aaattgaatgtaatttgcatttaatttta 237  Q
    |||||||||||||||||||||||||||||    
T  51426649 aaattgaatgtaatttgcatttaatttta 51426621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 8e-74; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 74 - 246
Target Start/End: Complemental strand, 21542586 - 21542414
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||    
T  21542586 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 21542487  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  21542486 tggctattggttatggaaaaaatgaaagaaaaagaaaattgaatgtaatttgcatttaatattatgagaataa 21542414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 76 - 246
Target Start/End: Original strand, 11082240 - 11082410
Alignment:
Q  76 acacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattg 175  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||| |||||||||||||||    
T  11082240 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagggagatgtaaaaacaattttcattg 11082339  T
Q  176 gctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  11082340 gctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 11082410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 35129047 - 35129220
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgt-agaaacaattttca 172  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||    
T  35129047 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaataaacaattttca 35129146  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  |||||||    
T  35129147 ttggttattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttacgagaataa 35129220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 7274868 - 7275062
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||| || |||||||||||| | |||||| ||| |||||| || |||||||||| |||||||||||||    
T  7274868 tcacacttattaagaaaactaaaacataagaatttgtagcatagttttttgtattttctttggaataagtttcatgggaagatgtaaaaacaattttcat 7274967  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| || ||||||| ||||||||||| |||| ||||    
T  7274968 tggctattggttatggaaaaaatgaaagagagagaaaattaaatgtaatttgtatttaatttcatgagaataagcaaaagtttttattggaaaag 7275062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 34177634 - 34177806
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| |||||| ||||||  |||||||| ||||||| |||||||||||||    
T  34177634 tcacacttattaagaaaattaaaacataagaatttggaatatagttttttgtgttttctttggaaaaaaatttatagggagatgtaaaaacaattttcat 34177733  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||| |||||||    
T  34177734 tggctattggttatggaaaaaatgaaagaaagagataattgaatgtaatttgcatttaattttatgagaataa 34177806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 3095722 - 3095884
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  3095722 ttaagaaaactaaagcataaaaatttggagtatagttttttgtgttttctttggaaaa-gttttataggaagatgtaaaaacaattttcattggctattg 3095820  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
     ||||||||||||||||| | | ||||||||||||||||||||||||||||||||| |||||||    
T  3095821 attatggaaaaaatgaaataaagagaaaattgaatgtaatttgcatttaattttatgagaataa 3095884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 74 - 261
Target Start/End: Original strand, 17751737 - 17751924
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||  ||||||| |   || ||||| ||||| |  ||||    
T  17751737 tcacacttattaagaaaattaaaatataagaatttggagtatagttttttgtgttttctttagattaagtttttttaaaaaatgtaaaaacagtgctcat 17751836  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttctt 261  Q
    ||||||||| ||||||| |||||| |||||| | |||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  17751837 tggctattgattatggagaaaatggaagagagaaaaaattgaatgtaatttgcatttagtttcataagaataaacaaaagtttttctt 17751924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 74 - 258
Target Start/End: Original strand, 12461422 - 12461606
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagtttt-ataggaagatgtagaaacaattttca 172  Q
    ||||| || |||||||||||||||||| |||||||||| ||||||||||| | | ||||||  || ||||||| |||| |||||||| ||||||||||||    
T  12461422 tcacatttattaagaaaactaaaacatgagaatttggaatatagtttttt-tattttctttgaaataagtttttatagaaagatgtaaaaacaattttca 12461520  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    |||||||||||||||||| |||||  |||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||||    
T  12461521 ttggctattggttatggagaaaatagaagagacagaaaattgaatgtaatttggatttaatttcatgagaataaacaaaagttttt 12461606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 83 - 252
Target Start/End: Original strand, 30794194 - 30794363
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    ||||||||||||||| ||||||||||| |||||| |||||| ||| || ||| ||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  30794194 ttaagaaaactaaaatataagaatttgaagtataattttttatgttttatttggaataagttttataggaagatgtaaaaacatttttcattggctattg 30794293  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    || ||||| |||||  |||||| |||||||| ||| ||||||||||||||||| || |||||||| ||||    
T  30794294 gtgatggagaaaatagaagagagagaaaattaaatctaatttgcatttaatttcatgagaataaaaaaaa 30794363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 112 - 252
Target Start/End: Complemental strand, 31107320 - 31107181
Alignment:
Q  112 gtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaa 211  Q
    |||||||||||||||| ||||||  |||||  |||||| ||| ||||| |||  ||||| |||| |||||| |||| ||||||||||||||||||||||     
T  31107320 gtatagttttttgtgttttctttgaaaaaaaatttataagaaaatgtaaaaatgatttttattgactattgattatagaaaaaatgaaagagaaagaaa- 31107222  T
Q  212 ttgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31107221 ttgaatgtaatttgcatttaattttataagaataaacaaaa 31107181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 9428844 - 9428754
Alignment:
Q  168 tttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||| ||| ||||||||||| |||||||| ||||||||||||| |||||    
T  9428844 tttcattggctattggttatagaaaaaataaaagagagagaaaattaaatataatttgcattaaattttatgagaataaacaaaaattttt 9428754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 4032156 - 4031991
Alignment:
Q  74 tcacacttgttaagaaaactaaaacata--agaa-tttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaatttt 170  Q
    |||||||| |||||||||||||||||||  || | |||| |  ||||||||||||||  |||||  || ||||||||| |||||||||| ||||||||||    
T  4032156 tcacacttattaagaaaactaaaacatagtagtagtttgtaacatagttttttgtgttatctttgaaataagttttatcggaagatgtaaaaacaatttt 4032057  T
Q  171 cattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||||||   ||| |||| || ||||||||| ||| || |||||||||| | |||||||||||||||    
T  4032056 cattggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 4031991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 4988069 - 4987947
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaatt 213  Q
    ||||||||||||||  |||||  || |||||||||||||||||||| ||| ||||||||||||   ||| |||| || |||||||||  || || |||||    
T  4988069 atagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcattggtagttgattatagagaaaatgaaaatgagagcaaatt 4987970  T
Q  214 gaatgtaatttgcatttaatttt 236  Q
    ||||| | |||||||||||||||    
T  4987969 gaatgcattttgcatttaatttt 4987947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 16524505 - 16524384
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaatt 213  Q
    ||||||||||||||  |||||  || |||||||||||||||||||| ||||||||||||||||   ||| |||| || ||||||||| ||| |  |||||    
T  16524505 atagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaa-agagaacaaatt 16524407  T
Q  214 gaatgtaatttgcatttaatttt 236  Q
    ||||| | |||||||||||||||    
T  16524406 gaatgcactttgcatttaatttt 16524384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 74 - 258
Target Start/End: Original strand, 14573121 - 14573305
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || ||||||||||||||| ||| ||||||||||||||  ||||||| | ||||||  || |||| |||| ||| |||||| ||| |||||||||    
T  14573121 tcacatttattaagaaaactaaaatatatgaatttggagtata-atttttgtattttctttgaaataagtattatgggatgatgtaaaaataattttcat 14573219  T
Q  174 tggctattggttatggaaaaaatgaaagaga-aagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
    ||  | ||| ||||||| ||||||  ||||| || |||||| ||| ||||||  ||||||||| || || ||||| ||||||||||    
T  14573220 tgtttgttgattatggagaaaatggtagagagaaaaaaatttaatataatttaaatttaatttcatgagtataaataaaagttttt 14573305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 3888527 - 3888431
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||||||||||||||||||||||||||||||||| ||   ||| |||| || ||||||||| ||| |  |||||||||| | |||||||||||||||    
T  3888527 aagttttataggaagatgtagaaacaattttcatgggtagttgattatagagaaaatgaaaaagagaacaaattgaatgcactttgcatttaatttt 3888431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 16013465 - 16013583
Alignment:
Q  114 atagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaatt 213  Q
    |||||||||||| |  |||||  || |||||||||||||||||||| ||||||||||||||||   ||| |||| || ||||||||| ||| || |||||    
T  16013465 atagttttttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaaaagagagcaaatt 16013564  T
Q  214 gaatgtaatttgcatttaa 232  Q
    ||||| | ||| |||||||    
T  16013565 gaatgcatttttcatttaa 16013583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 5822027 - 5822123
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaatttt 170  Q
    |||||||| ||||||||||||||| || | | |||| |||||| ||| ||||||  ||||| ||| |||||| |||| |||||||| ||||||||||    
T  5822027 tcacacttattaagaaaactaaaatattatagtttgtagtataatttcttgtgttatctttggaataagtttcatagaaagatgtaaaaacaatttt 5822123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 9428913 - 9428846
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaa 141  Q
    ||||| || |||| |||||||||||||||||||||| |||||| |||||||||| || |||| |||||    
T  9428913 tcacatttattaataaaactaaaacataagaatttgaagtataattttttgtgttttttttaaaaaaa 9428846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 237
Target Start/End: Complemental strand, 21964121 - 21963958
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||||||  ||| ||||||||||||||  |||| |   |||| ||||||||||  || ||| || ||||||||| | |||||||| ||| |||||| ||    
T  21964121 tcacacttactaataaaactaaaacatagtaattagagatataattttttgtgttctccttaaaataagttttatggaaagatgtaaaaataatttttat 21964022  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
    ||| ||||| | ||||| ||||| ||| ||| |  |||||| ||| ||||| ||||||||||||    
T  21964021 tggttattgatcatggagaaaataaaaaagagaacaaattgtatgaaatttacatttaatttta 21963958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 5300659 - 5300701
Alignment:
Q  140 aagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||||||||||||||||||| |||||||||||||||| |||||    
T  5300659 aagttttataggaagatgtaaaaacaattttcattggttattg 5300701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 17598448 - 17598294
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    ||||||||| ||| || |||  |||||  ||||| ||||||||||  ||||| ||| || |||||| | |||||||| ||| |||| ||||||| ||       
T  17598448 ttaagaaaattaacacttaatgatttgaggtataattttttgtgttctctttggaataaattttatggaaagatgtaaaaataattctcattggttaaaa 17598349  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttta 237  Q
     ||||||| ||||| ||| ||| |  |||||||||| ||||||||||||||||||    
T  17598348 attatggagaaaataaaaaagagaataaattgaatgcaatttgcatttaatttta 17598294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 3102862 - 3102786
Alignment:
Q  178 tattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagt 254  Q
    ||||||||||||| |  ||| || ||| ||||||| |||||||||| | |||||||||| || ||||||||||||||    
T  3102862 tattggttatggagatcatggaaaagagagaaaatggaatgtaattagaatttaattttttatgaataaacaaaagt 3102786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 15830861 - 15830760
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||| ||||||||||||||| | |||  |  ||| ||||||||||  | |||| || |||||| ||||||||||||| ||| |||||||||    
T  15830861 tcacatttattaaaaaaactaaaacataatagtttctaacataattttttgtgttatttttaaaataagtttaataggaagatgtaaaaaaaattttcat 15830762  T
Q  174 tg 175  Q
    ||    
T  15830761 tg 15830760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 33
Target Start/End: Complemental strand, 17271305 - 17271277
Alignment:
Q  5 atgtctaccatttatttttaagagacata 33  Q
    |||||||||||||||||||||||||||||    
T  17271305 atgtctaccatttatttttaagagacata 17271277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 78 - 252
Target Start/End: Complemental strand, 10209 - 10035
Alignment:
Q  78 acttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggc 177  Q
    |||| ||||||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  10209 acttattaagaaaattaaaacataagaatttggaatgtagttttttgtgttttctttagaaaaagttttataggaagatgtaaaaacaattttcattgac 10110  T
Q  178 tattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  10109 tattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattgtatgagaataaacaaaa 10035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 566 - 738
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||||| ||||||| |||||||||||||    
T  566 tcacacttattaagaaaactaaaacataagaatttggagtatagttttatgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcat 665  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 246  Q
    ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| |||||||    
T  666 tggctattggttatggaaaaaatgaaagaaagataaaattgaatgtaatttgcatttaattttatgagaataa 738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 74 - 262
Target Start/End: Original strand, 44764 - 44952
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    ||||| || |||||||||||||||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||  | |||||||||||||    
T  44764 tcacatttattaagaaaactaaaacataataatttggagtatatttttttgtgttttctttggaaaaagttttataggaatattaaaaaacaattttcat 44863  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttg 262  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  44864 tggctattggttatggaaaaaatgaaagagagggaaaattaaatgtaatttgcatttaattttacgagaataaacaaaagtttttcttg 44952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 78125 - 77947
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||  |||||||| |||||||||||||| |||||||||||||    
T  78125 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttgtataggaagatgtaaaaacaattttcat 78026  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||| |||||||||||||||||||||||| |  |||||||||||||||||| ||||||||||||| |||||||||||||    
T  78025 tggccattggttatggaaaaaatgaaagaaagtgaaaattgaatgtaatttacatttaattttatgagaataaacaaaa 77947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 100 - 250
Target Start/End: Original strand, 3447 - 3597
Alignment:
Q  100 taagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaa 199  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  3447 taagaatttggagtatagttttttgtgttttcttttgaaaaagttttataggaagatgtaaaaataattttcattggctattggttatggaaaaaatgaa 3546  T
Q  200 agagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaa 250  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  3547 agagagagaaaattgaatgtaatttgcatttaattgtatgagaataaacaa 3597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 117; Significance: 2e-59; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 88 - 268
Target Start/End: Complemental strand, 1166 - 986
Alignment:
Q  88 aaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttat 187  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||  |||||||||||||| |||||||| ||||| |||||||||  ||||||||||    
T  1166 aaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcattgagtattggttat 1067  T
Q  188 ggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||||  |||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  1066 ggaaaaaatgaaagagggagaaaattcaatgtaatttgcgtttaattttatgagaataaacaaaagtttttcttgggaaag 986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 88 - 268
Target Start/End: Complemental strand, 9126 - 8946
Alignment:
Q  88 aaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttat 187  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||  |||||||||||||| |||||||| ||||| |||||||||  ||||||||||    
T  9126 aaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcattgagtattggttat 9027  T
Q  188 ggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    ||||||||||||||||  |||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  9026 ggaaaaaatgaaagagggagaaaattcaatgtaatttgcgtttaattttatgagaataaacaaaagtttttcttgggaaag 8946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 78 - 258
Target Start/End: Complemental strand, 157958 - 157778
Alignment:
Q  78 acttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggc 177  Q
    |||| |||||||||||||| |||||||||||| || |||||||||||||| |||||| ||| |||||| || || ||||||| |||||||||||||||||    
T  157958 acttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggggagatgtaaaaacaattttcattggc 157859  T
Q  178 tattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagttttt 258  Q
     |||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| || |||||||  ||||||||||    
T  157858 aattggttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataagaaaaagttttt 157778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 52676 - 52789
Alignment:
Q  155 atgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagt 254  Q
    ||||| ||||||||||||||| |||||| ||||||| |||||  |||||| |||||||| ||||||||| ||||||||||| || | ||||| |||||||    
T  52676 atgtaaaaacaattttcattgactattgattatggagaaaatagaagagagagaaaattaaatgtaattcgcatttaatttcatgaaaataagcaaaagt 52775  T
Q  255 ttttcttgggaaag 268  Q
    ||||||||| ||||    
T  52776 ttttcttggaaaag 52789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 83 - 252
Target Start/End: Complemental strand, 155019 - 154851
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||||||||||||||||||||||| || | |||||||||| || | ||||||  |||||||||||||| |||||||| ||||||||| ||||||||||||    
T  155019 ttaagaaaactaaaacataagaatctgaaatatagttttt-gtattttctttgaaaaaagttttatagaaagatgtaaaaacaatttacattggctattg 154921  T
Q  183 gttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||||||||||||||| | |||||||| |||||||||||||||||||||||| |||||||| ||||    
T  154920 gttatggaaaaaatgaaagatagagaaaatttaatgtaatttgcatttaattttatgagaataaaaaaaa 154851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 263
Target Start/End: Complemental strand, 40321 - 40159
Alignment:
Q  99 ataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatga 198  Q
    ||||||||||| ||||||| ||||||||| |||||| ||| || |||||||| ||| |||| ||||||||||||||||||||||||||| |||||||||     
T  40321 ataagaatttg-agtatagctttttgtgttttctttggaataaattttatagaaagttgtaaaaacaattttcattggctattggttatagaaaaaatgg 40223  T
Q  199 aagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    | |||| ||||| |||||||||||||||||||||||| || |||||||| ||| |||||||||||    
T  40222 atgagagagaaagttgaatgtaatttgcatttaatttcatgagaataaa-aaaggtttttcttgg 40159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 116 - 268
Target Start/End: Complemental strand, 160376 - 160224
Alignment:
Q  116 agttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattggttatggaaaaaatgaaagagaaagaaaattga 215  Q
    |||||||||||| |||||| ||| ||  || || |||||||||| || || ||||||||||||||||||||||| ||||||| |||| | ||||||||||    
T  160376 agttttttgtgttttctttggaataaaattcatgggaagatgtaaaaccagttttcattggctattggttatgggaaaaatggaagaaagagaaaattga 160277  T
Q  216 atgtaatttgcatttaattttataagaataaacaaaagtttttcttgggaaag 268  Q
    |||||||||  ||||||||| |||||||||| |||||| ||||||||| ||||    
T  160276 atgtaatttatatttaatttcataagaataagcaaaaggttttcttggaaaag 160224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 5868 - 6030
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| |||||||||  | |||| | |||||||||||||||  || ||  || |||||||||||||||||||| ||||||||||| |    
T  5868 tcacacttattaagaaaattaaaacatagtagtttgtaatatagttttttgtgttatcattgaaataagttttataggaagatgtaaaaacaattttcct 5967  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    ||    ||| |||| |||||||||||| ||| || |||||||||| | |||||||||||||||    
T  5968 tgatagttgattatagaaaaaatgaaaaagagagtaaattgaatgcactttgcatttaatttt 6030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 233480 - 233658
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtatt-ctttagaaaaagttttataggaagatgtagaaacaattttca 172  Q
    ||||| || ||||||||||||||| ||||||||||    ||||||| ||||||| || ||||| || |||||| || |||||||||| ||||| ||||||    
T  233480 tcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttttctttaaaataagtttcatgggaagatgtaaaaaca-ttttca 233578  T
Q  173 ttggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataaacaaaa 252  Q
    |||||||| | |||   | |||||| ||||||  || |||||||||||||||||||||||||| || ||||||| |||||    
T  233579 ttggctatggattaaaaagaaaatggaagagagtgataattgaatgtaatttgcatttaatttcatgagaataagcaaaa 233658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 3336 - 3174
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| |||||||||  | |||| |  ||||||||||||||  |||||  || ||||||||||||||||| || ||||||||| |||    
T  3336 tcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatctaaaaacaatttccat 3237  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaatttt 236  Q
    |||   ||| |||| || ||||||||| |||||  |||||||||| | ||||||| |||||||    
T  3236 tggtagttgattatagagaaaatgaaaaagaaaacaaattgaatgcactttgcatataatttt 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 899 - 843
Alignment:
Q  206 agaaaattgaatgtaatttgcatttaattttataagaataaacaaaagtttttcttgg 263  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  899 agaaaatt-aatgtaatttgcatttaatttcatgagaataaacaaaagttttttttgg 843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 196
Target Start/End: Complemental strand, 997 - 893
Alignment:
Q  83 ttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcattggctattg 182  Q
    |||| |||| ||||||||||||||||| |||||||||||         |||| ||| ||||||||||| ||||| || ||| ||||||||||| ||||||    
T  997 ttaaaaaaattaaaacataagaatttgaagtatagtttt---------ctttggaataagttttatagaaagatataaaaataattttcattgactattg 907  T
Q  183 gttatggaaaaaat 196  Q
    |||||||| |||||    
T  906 gttatggagaaaat 893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 215
Target Start/End: Original strand, 160912 - 161053
Alignment:
Q  74 tcacacttgttaagaaaactaaaacataagaatttggagtatagttttttgtgtattctttagaaaaagttttataggaagatgtagaaacaattttcat 173  Q
    |||||||| ||||||||| |||||||||  | |||| |  ||||||| ||||||  || ||  || |||||| |||| ||| |||| |||||||||||||    
T  160912 tcacacttattaagaaaattaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagtttgatagaaagttgtaaaaacaattttcat 161011  T
Q  174 tggctattggttatggaaaaaatgaaagagaaagaaaattga 215  Q
    ||| |||| ||||| || ||||||||||| | || |||||||    
T  161012 tggttatttgttattgagaaaatgaaagaaagagcaaattga 161053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University