View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8730_low_12 (Length: 254)
Name: NF8730_low_12
Description: NF8730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8730_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 25118271 - 25118224
Alignment:
| Q |
191 |
ataatatactcttttatggcaccaatcttcctagtcataagttttaat |
238 |
Q |
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| T |
25118271 |
ataatatactcttttatggcaccaatcttcctagtcattggttttaat |
25118224 |
T |
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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 25118332 - 25118304
Alignment:
| Q |
200 |
tcttttatggcaccaatcttcctagtcat |
228 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
25118332 |
tcttttatggcaccaatcttcctagtcat |
25118304 |
T |
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