View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8730_low_7 (Length: 338)
Name: NF8730_low_7
Description: NF8730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8730_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 4 - 324
Target Start/End: Original strand, 25741897 - 25742217
Alignment:
| Q |
4 |
aacattttcactatgatacacccttttaggtttgagaaaagacttccgtgtccttgtgttccaacagtgtaggctgagtccattagaccggaggccgcag |
103 |
Q |
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| T |
25741897 |
aacattttcactatgatacacccttttaggtttgagaaaagacttccgtgtccttgtgttccaacagtgtaggctgagtccattagaccggaggccgcag |
25741996 |
T |
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| Q |
104 |
aagaagctccggccaccggatatggactgaaatgaaacgttggggagtattggtggaatgagttttttgttttggtagcattggatgtattggtagggct |
203 |
Q |
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| T |
25741997 |
aagaagctccggccaccggatatggactgaaatgaaacgttggggagtattggtggaatgagttttttgttttggtagcattggatgtattggtagggct |
25742096 |
T |
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| Q |
204 |
taccggcgactatgccgcagatggtggaggtgttgtggatgatggcggtagtggtggcggtgccgaggctgttgacggtggttatggtgaaaatgaagga |
303 |
Q |
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| T |
25742097 |
taccggcgactatgccgcagatggtggaggtgttgtggatgatggcggtagtggtggcggtgccgaggctgttgacggtggttatggtgaaaatgaagga |
25742196 |
T |
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| Q |
304 |
gaaaatgagtgttagtgatgt |
324 |
Q |
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||||||||||||||||||||| |
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| T |
25742197 |
gaaaatgagtgttagtgatgt |
25742217 |
T |
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