View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8731_low_3 (Length: 431)

Name: NF8731_low_3
Description: NF8731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8731_low_3
NF8731_low_3
[»] chr6 (12 HSPs)
chr6 (21-425)||(4801614-4802018)
chr6 (254-302)||(14350947-14350995)
chr6 (263-337)||(29283822-29283896)
chr6 (267-337)||(34701158-34701228)
chr6 (266-303)||(9444967-9445004)
chr6 (254-303)||(10320445-10320494)
chr6 (254-315)||(30374534-30374595)
chr6 (278-338)||(1606657-1606717)
chr6 (263-303)||(28757038-28757078)
chr6 (266-338)||(30613186-30613258)
chr6 (266-326)||(32053798-32053858)
chr6 (254-302)||(32193874-32193922)
[»] chr8 (15 HSPs)
chr8 (254-326)||(8828148-8828220)
chr8 (263-337)||(40167329-40167403)
chr8 (254-339)||(6109167-6109252)
chr8 (254-331)||(29716686-29716763)
chr8 (254-338)||(7553677-7553761)
chr8 (266-334)||(17704023-17704091)
chr8 (263-338)||(11104771-11104846)
chr8 (254-316)||(5448431-5448493)
chr8 (266-331)||(5179803-5179868)
chr8 (254-295)||(27134442-27134483)
chr8 (250-295)||(36919305-36919350)
chr8 (266-318)||(2508615-2508667)
chr8 (263-303)||(5155577-5155617)
chr8 (266-314)||(7204879-7204927)
chr8 (254-302)||(14303163-14303211)
[»] chr7 (12 HSPs)
chr7 (254-340)||(46675904-46675989)
chr7 (266-338)||(3883049-3883121)
chr7 (267-302)||(1052029-1052064)
chr7 (263-302)||(32862626-32862665)
chr7 (263-302)||(36341080-36341119)
chr7 (256-337)||(6565525-6565605)
chr7 (254-295)||(23198771-23198812)
chr7 (254-315)||(27993031-27993092)
chr7 (254-302)||(2916000-2916047)
chr7 (254-326)||(6579616-6579688)
chr7 (266-338)||(9522922-9522994)
chr7 (254-302)||(36428146-36428194)
[»] chr4 (10 HSPs)
chr4 (254-338)||(30380528-30380612)
chr4 (263-303)||(48317738-48317778)
chr4 (263-331)||(25754369-25754436)
chr4 (263-298)||(31604312-31604347)
chr4 (266-304)||(39411764-39411802)
chr4 (254-336)||(44200537-44200618)
chr4 (263-336)||(30780136-30780209)
chr4 (267-304)||(51004036-51004073)
chr4 (266-338)||(19332280-19332352)
chr4 (254-302)||(36662384-36662432)
[»] chr2 (13 HSPs)
chr2 (263-331)||(4897550-4897618)
chr2 (263-331)||(4944944-4945012)
chr2 (266-338)||(15346489-15346561)
chr2 (256-331)||(41859852-41859927)
chr2 (254-331)||(31812976-31813053)
chr2 (254-295)||(35327354-35327395)
chr2 (263-304)||(35727444-35727485)
chr2 (263-295)||(12757135-12757167)
chr2 (254-338)||(15251818-15251902)
chr2 (254-302)||(22558975-22559023)
chr2 (263-331)||(23250306-23250374)
chr2 (263-295)||(27314874-27314906)
chr2 (248-304)||(34364508-34364564)
[»] chr1 (15 HSPs)
chr1 (263-331)||(46334782-46334850)
chr1 (263-338)||(9265815-9265890)
chr1 (263-302)||(39949819-39949858)
chr1 (263-338)||(52262145-52262220)
chr1 (254-336)||(30678794-30678876)
chr1 (256-302)||(32962563-32962609)
chr1 (253-331)||(45773528-45773606)
chr1 (250-295)||(45701322-45701367)
chr1 (263-331)||(7454564-7454632)
chr1 (254-302)||(7550894-7550942)
chr1 (263-303)||(14983462-14983502)
chr1 (255-295)||(34707886-34707926)
chr1 (255-331)||(39302944-39303020)
chr1 (254-302)||(41032929-41032977)
chr1 (254-302)||(52267762-52267810)
[»] scaffold0122 (1 HSPs)
scaffold0122 (254-331)||(14172-14249)
[»] chr3 (14 HSPs)
chr3 (254-338)||(45309122-45309206)
chr3 (263-326)||(38573564-38573627)
chr3 (254-304)||(8127461-8127511)
chr3 (266-303)||(28148482-28148519)
chr3 (263-304)||(39100429-39100470)
chr3 (257-302)||(39869822-39869867)
chr3 (266-303)||(41291734-41291771)
chr3 (254-303)||(47377363-47377412)
chr3 (254-303)||(48517669-48517718)
chr3 (263-336)||(49604922-49604995)
chr3 (266-338)||(18870704-18870776)
chr3 (255-331)||(27397598-27397674)
chr3 (254-302)||(28244119-28244167)
chr3 (254-302)||(33771688-33771736)
[»] scaffold0568 (1 HSPs)
scaffold0568 (267-326)||(913-972)
[»] chr5 (10 HSPs)
chr5 (255-302)||(18278274-18278321)
chr5 (279-324)||(4040380-4040425)
chr5 (253-302)||(15725329-15725378)
chr5 (254-331)||(27903111-27903188)
chr5 (263-304)||(43135007-43135048)
chr5 (266-338)||(4262518-4262590)
chr5 (254-338)||(10032253-10032337)
chr5 (266-338)||(20175735-20175807)
chr5 (254-302)||(29178445-29178493)
chr5 (255-295)||(39917906-39917946)
[»] scaffold0777 (1 HSPs)
scaffold0777 (248-314)||(5425-5490)
[»] scaffold0154 (1 HSPs)
scaffold0154 (255-304)||(10770-10819)
[»] scaffold0262 (1 HSPs)
scaffold0262 (254-338)||(15909-15993)
[»] scaffold0198 (1 HSPs)
scaffold0198 (267-303)||(19250-19286)


Alignment Details
Target: chr6 (Bit Score: 325; Significance: 0; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 21 - 425
Target Start/End: Original strand, 4801614 - 4802018
Alignment:
Q  21 aaagacattccaacatgttctacatcgaacgtttgagagacttagagagtaaactatcattataaataaaaaacctaaagcctaaaacacactgtccggt 120  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4801614 aaagacattccaacatgttctacatcgaacgtttgagaggcttagagagtaaactatcattataaataaaaaacctaaagcctaaaacacactgtccggt 4801713  T
Q  121 aattcataagtgcattcagctttagtcggttcaaagaaggttgattaatgtttttcaaaaacattaaaagactagtttaatatttaaccttttgaactag 220  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4801714 aattcataagtgcattcagctttagtcggttcgaagaaggttgattaatgtttttcaaaaacattaaaaaactagtttaatatttaaccttttgaactag 4801813  T
Q  221 ttttggtggaatcaacatgtgtttaagaagttttcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccgg 320  Q
    ||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||| |||||| |||| |||||||| ||||| |||||||||||       
T  4801814 ttttggtggaatcaaccggtgtttaagaagtcttcgtgagcataactcagttggtaagtacaatgcataatatatacaaagtttaggattcaaactctaa 4801913  T
Q  321 ccaccataaaagaaaaaaccggtgtttaagaagagacttatgggttaacaaagtcttttccgtagatctaatatttaatcacatgcagcaacaatttcat 420  Q
    |||||||| || ||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4801914 ccaccatagaaaaaaaaaccgatgtttaaaaagagacttatgggttaactaagtcttttccgtagatctaatatttaatcacatgcagcaacaatttcat 4802013  T
Q  421 ctcac 425  Q
    |||||    
T  4802014 ctcac 4802018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 14350947 - 14350995
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||| ||||||||||| || |||||||| ||||||||||||||||    
T  14350947 tcgtgagtttaactcagttgatatgaacaatgcataaaatatacaaggt 14350995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 29283822 - 29283896
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaa 337  Q
    ||||||||||||||   ||||||||||| |||| |||||| || | ||||||||||| |||||| |||| |||||    
T  29283822 taactcagttggtagagacaatgtataatatatgcaaggtctagggttcaaactccgaccaccacaaaaaaaaaa 29283896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 337
Target Start/End: Original strand, 34701158 - 34701228
Alignment:
Q  267 tcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaa 337  Q
    |||||||||| |||||||| |||| |||| |||||| |  | |||||||||||||||||| |||| |||||    
T  34701158 tcagttggtaggaacaatgcataatatatgcaaggtctgaggttcaaactccggccaccacaaaaaaaaaa 34701228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 303
Target Start/End: Original strand, 9444967 - 9445004
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtt 303  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  9444967 ctcagttggtatgaacaatgtataaaatatgcaaggtt 9445004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 10320494 - 10320445
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtt 303  Q
    |||||||  |||||||||||||||||||||||||| | ||||| ||||||    
T  10320494 tcgtgagcttaactcagttggtaagaacaatgtatcatatatataaggtt 10320445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 30374595 - 30374534
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaac 315  Q
    |||||||| || |||| |||||||| ||||||||||| |||| ||||||||  |||||||||    
T  30374595 tcgtgagtttacctcaattggtaaggacaatgtataatatatgcaaggtttgggattcaaac 30374534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 338
Target Start/End: Original strand, 1606657 - 1606717
Alignment:
Q  278 gaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    |||||||||||||||||| |||| |    |||||||||||||||||||| |||| ||||||    
T  1606657 gaacaatgtataaaatatgcaagatccgagattcaaactccggccaccacaaaaaaaaaaa 1606717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 28757078 - 28757038
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtt 303  Q
    |||||||||||||||| ||||||||||| |||| |||||||    
T  28757078 taactcagttggtaaggacaatgtataatatatgcaaggtt 28757038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 30613186 - 30613258
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    ||||||||||||||||||| ||||  |||||||||||||  | ||| |||||||  ||||| |||| ||||||    
T  30613186 ctcagttggtaagaacaatatatattatatacaaggtttgaggttcgaactccgaacaccacaaaaaaaaaaa 30613258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 326
Target Start/End: Original strand, 32053798 - 32053858
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccacca 326  Q
    ||||||||||| | |||||| |||| |||| |||||||  || ||||||||||||||||||    
T  32053798 ctcagttggtatggacaatgcataatatatgcaaggttcgtggttcaaactccggccacca 32053858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 32193922 - 32193874
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||| || |||||||||||||||||||| |||| |||| ||||||    
T  32193922 tcgtgagtttagctcagttggtaagaacaatgcataatatatgcaaggt 32193874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 8828220 - 8828148
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccacca 326  Q
    |||||||| || |||||||| ||| |||||| |||||||||| ||||||||||| |||||| |||||||||||    
T  8828220 tcgtgagtttagctcagttgttaaaaacaatttataaaatatgcaaggtttatggttcaaagtccggccacca 8828148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 40167329 - 40167403
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaa 337  Q
    |||||||||||||| | |||||| |||| ||||||||||||   ||||||||| |||||||||| |||| |||||    
T  40167329 taactcagttggtatggacaatgcataatatatacaaggttcgggattcaaaccccggccaccacaaaaaaaaaa 40167403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 339
Target Start/End: Original strand, 6109167 - 6109252
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaac 339  Q
    |||||||| ||  ||||||| || | |||||| |||||||||||||||||  || |||||||||||||||||| || | |||||||    
T  6109167 tcgtgagtttatatcagttgatatggacaatgcataaaatatacaaggttcgtggttcaaactccggccaccacaacaaaaaaaac 6109252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 29716763 - 29716686
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    |||||||  |||||||||||||| |||||||  |||| |||| ||||||    |||||||||||||||||||||||||    
T  29716763 tcgtgagcttaactcagttggtaggaacaattcataatatatgcaaggtccgggattcaaactccggccaccataaaa 29716686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 7553677 - 7553761
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    |||||||| |||||||||||||| | |||||| |||| |||| ||||||  | | |||||||||||| ||||| |||| ||||||    
T  7553677 tcgtgagtttaactcagttggtagggacaatgcataatatatgcaaggtccaaggttcaaactccggacaccacaaaaaaaaaaa 7553761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 17704023 - 17704091
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaa 334  Q
    ||||||||||||| |||||| |||| |||| |||||| | ||||||||||  ||||||||| |||||||    
T  17704023 ctcagttggtaaggacaatgcataatatatgcaaggtctgtgattcaaacctcggccaccacaaaagaa 17704091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 11104771 - 11104846
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    |||||||||||||| |||||||| |||| ||||||||||||   ||||| ||| | |||||||| |||| ||||||    
T  11104771 taactcagttggtaggaacaatgcataatatatacaaggttcgggattcgaacccaggccaccagaaaaaaaaaaa 11104846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 5448493 - 5448431
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaact 316  Q
    |||||||  ||| |||||||||   ||||||| ||||||||||||||||||| ||||||||||    
T  5448493 tcgtgagcttaattcagttggttgaaacaatgcataaaatatacaaggtttaagattcaaact 5448431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 5179803 - 5179868
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    ||||||||||||| |||||| |||| ||||||||||||   | |||||||| ||||||||| ||||    
T  5179803 ctcagttggtaaggacaatgcataatatatacaaggttcggggttcaaacttcggccaccacaaaa 5179868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 27134483 - 27134442
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatat 295  Q
    |||||||| |||||||||||||| ||||||||||||| ||||    
T  27134483 tcgtgagtttaactcagttggtatgaacaatgtataatatat 27134442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 36919305 - 36919350
Alignment:
Q  250 gttttcgtgagtataactcagttggtaagaacaatgtataaaatat 295  Q
    |||| ||||||  |||||||||||||||||||||||||||| ||||    
T  36919305 gtttccgtgagcttaactcagttggtaagaacaatgtataatatat 36919350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 2508615 - 2508667
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactcc 318  Q
    ||||||||||  |||||||| ||||||||| ||||||  ||||||||||||||    
T  2508615 ctcagttggttggaacaatgcataaaatatgcaaggtccatgattcaaactcc 2508667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 5155617 - 5155577
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtt 303  Q
    ||||||||||| ||||||||||| ||||||||| |||||||    
T  5155617 taactcagttgataagaacaatgcataaaatatgcaaggtt 5155577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 7204879 - 7204927
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaa 314  Q
    ||||||| ||| ||||||||||||| |||| ||||||||| ||||||||    
T  7204879 ctcagttagtaggaacaatgtataatatatgcaaggtttaagattcaaa 7204927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 14303163 - 14303211
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||| || ||||||||||| | ||||||||||| |||||||||||    
T  14303163 tcgtgagtttagctcagttggtatggacaatgtataatatatacaaggt 14303211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 46675904 - 46675989
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaacc 340  Q
    |||||||  |||||||||||||||| |||||||||||||||| |||||| |||| || |||||||| ||||||  ||| ||||||||    
T  46675904 tcgtgagcgtaactcagttggtaaggacaatgtataaaatatgcaaggtctatg-tttaaactccgcccaccaccaaaaaaaaaacc 46675989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 3883121 - 3883049
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    |||||||||||  |||||||||| | |||| |||| |||  |||| |||||||||||||||||||| ||||||    
T  3883121 ctcagttggtagaaacaatgtatgatatatgcaagatttgagatttaaactccggccaccataaaaaaaaaaa 3883049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 1052064 - 1052029
Alignment:
Q  267 tcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||||||||||||||||||| |||||||||||    
T  1052064 tcagttggtaagaacaatgtataatatatacaaggt 1052029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 302
Target Start/End: Original strand, 32862626 - 32862665
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  32862626 taactcagttggtaagaacaacgcataaaatatacaaggt 32862665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 302
Target Start/End: Complemental strand, 36341119 - 36341080
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  36341119 taactcagttggtatgaacaatgcataaaatatacaaggt 36341080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 337
Target Start/End: Original strand, 6565525 - 6565605
Alignment:
Q  256 gtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaa 337  Q
    ||||| |||||||| |||||| |||||||| ||||||||| |||||| |  | ||||| |||||||||||| |||| |||||    
T  6565525 gtgagcataactcaattggtatgaacaatgcataaaatatgcaaggtctggggttcaa-ctccggccaccacaaaaaaaaaa 6565605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 23198812 - 23198771
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatat 295  Q
    |||||||| |||||||||||||| |||||||| |||||||||    
T  23198812 tcgtgagtttaactcagttggtatgaacaatgcataaaatat 23198771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 27993092 - 27993031
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaac 315  Q
    |||||||  |||||||||||||| |||||||| ||||||||| |||||| || | |||||||    
T  27993092 tcgtgagcttaactcagttggtatgaacaatgcataaaatatgcaaggtctagggttcaaac 27993031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 2916000 - 2916047
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    ||||||||||| |||||||||| || ||||||||||| |||||||||||    
T  2916000 tcgtgagtatagctcagttggt-aggacaatgtataatatatacaaggt 2916047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 6579616 - 6579688
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccacca 326  Q
    |||||||  ||||||| |||||| | |||||||||||||||| |||||| || | ||||||| ||| ||||||    
T  6579616 tcgtgagcttaactcaattggtatggacaatgtataaaatatgcaaggtgtaaggttcaaaccccgaccacca 6579688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 9522922 - 9522994
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    ||||||||||| |||||||| |||| |||| ||||||||  | ||| ||| ||||||||||| ||| ||||||    
T  9522922 ctcagttggtatgaacaatgcataatatatgcaaggtttggggttcgaaccccggccaccattaaaaaaaaaa 9522994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 36428146 - 36428194
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||  |||||||||||||| | |||||||||||||||| ||||||    
T  36428146 tcgtgagcttaactcagttggtatggacaatgtataaaatatgcaaggt 36428194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 30380528 - 30380612
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    |||||||| |||||||||||||||| ||||||||||| |||| ||||||||  | ||| || |||| |||||| |||| ||||||    
T  30380528 tcgtgagtttaactcagttggtaaggacaatgtataatatatgcaaggtttggggttcgaattccgaccaccacaaaaaaaaaaa 30380612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 48317778 - 48317738
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtt 303  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  48317778 taactcagttggtaagaacagtgtataaaatatacaaggtt 48317738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 25754436 - 25754369
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    ||||| ||||||||||||||||| ||| |||||| || ||||| |||||||||||||| ||||| ||||    
T  25754436 taacttagttggtaagaacaatgcatataatatataaagttta-gattcaaactccggacaccacaaaa 25754369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 298
Target Start/End: Complemental strand, 31604347 - 31604312
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatataca 298  Q
    ||||||||||||||||||||||| ||||||||||||    
T  31604347 taactcagttggtaagaacaatgcataaaatataca 31604312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 304
Target Start/End: Original strand, 39411764 - 39411802
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggttt 304  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  39411764 ctcagttggtaagaacaatgtataatatatgcaaggttt 39411802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 44200618 - 44200537
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaa 336  Q
    |||||||| ||| |||||||||| ||  |||||||||||||| |||||| |||  ||||||| |||||||||| |||| ||||    
T  44200618 tcgtgagtttaattcagttggtaggat-aatgtataaaatatgcaaggtctatagttcaaacaccggccaccacaaaaaaaaa 44200537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 30780136 - 30780209
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaa 336  Q
    |||||||||||||| | |||||| |||||||||| ||||||   ||||||||| || ||||||| |||| ||||    
T  30780136 taactcagttggtatggacaatgcataaaatatataaggttcgggattcaaacccccgccaccacaaaataaaa 30780209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 304
Target Start/End: Complemental strand, 51004073 - 51004036
Alignment:
Q  267 tcagttggtaagaacaatgtataaaatatacaaggttt 304  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  51004073 tcagttggtaagaacaatgtataatatatgcaaggttt 51004036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 19332352 - 19332280
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    ||||| || |||| |||||| |||| |||| ||| ||| ||| |||||||| |||||||||||||| ||||||    
T  19332352 ctcagatgataaggacaatgcataatatatgcaaagttcatggttcaaacttcggccaccataaaaaaaaaaa 19332280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 36662432 - 36662384
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||| ||||||||||||||   |||||| ||||||||||||||||    
T  36662432 tcgtgagtttaactcagttggtatagacaatgcataaaatatacaaggt 36662384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 4897550 - 4897618
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    |||||||||||||||| |||||| |||| |||| ||||||||||| ||||||| | |||||||| ||||    
T  4897550 taactcagttggtaaggacaatgcataatatatgcaaggtttatggttcaaaccctggccaccacaaaa 4897618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 4944944 - 4945012
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    |||||||||||||||| |||||| |||| |||| ||||||||||| ||||||| | |||||||| ||||    
T  4944944 taactcagttggtaaggacaatgcataatatatgcaaggtttatggttcaaaccctggccaccacaaaa 4945012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 15346561 - 15346489
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    |||||||| |||||||| || |||| |||||||| ||||| ||||| |||||| |||||||||||| ||||||    
T  15346561 ctcagttgctaagaacagtgcataatatatacaaagtttaggattcgaactccagccaccataaaaaaaaaaa 15346489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 41859852 - 41859927
Alignment:
Q  256 gtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    |||||| |||||||||||||| | |||||| ||||||||| |||||| |  | ||||||| |||||||||||||||    
T  41859852 gtgagtttaactcagttggtatggacaatgcataaaatatgcaaggtctggggttcaaaccccggccaccataaaa 41859927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 31812976 - 31813053
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    |||| ||| |||||||||||||||||||| ||||||| |||| ||||||  | | |||||||  ||||||||| ||||    
T  31812976 tcgtaagtttaactcagttggtaagaacagtgtataatatatgcaaggtccaaggttcaaacatcggccaccacaaaa 31813053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 35327354 - 35327395
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatat 295  Q
    |||||||| ||||||||||| || ||||||||||||||||||    
T  35327354 tcgtgagtttaactcagttgatatgaacaatgtataaaatat 35327395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 35727444 - 35727485
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggttt 304  Q
    ||||||||||||||||||||||| |||| |||| ||||||||    
T  35727444 taactcagttggtaagaacaatgcataatatatgcaaggttt 35727485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 12757135 - 12757167
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatat 295  Q
    |||||||||||||||||||||||||||| ||||    
T  12757135 taactcagttggtaagaacaatgtataatatat 12757167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 15251902 - 15251818
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    ||||||| ||| || ||||| || | ||||| |||||||||| |||||||    ||||||||||||||||||| |||| ||||||    
T  15251902 tcgtgagcatagcttagttgatatggacaatatataaaatatgcaaggttcggaattcaaactccggccaccacaaaaaaaaaaa 15251818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 22558975 - 22559023
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||| |||||||||||||  | |||||| ||||||||||||||||    
T  22558975 tcgtgagtttaactcagttggtttggacaatgcataaaatatacaaggt 22559023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 23250374 - 23250306
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    ||||||||||||||||||||||| |||| |||| ||||||  | | ||||||| ||| |||||| ||||    
T  23250374 taactcagttggtaagaacaatgcataatatatgcaaggtccagggttcaaaccccgaccaccacaaaa 23250306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 27314874 - 27314906
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatat 295  Q
    ||||||||||||||||||||||| |||||||||    
T  27314874 taactcagttggtaagaacaatgcataaaatat 27314906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 34364564 - 34364508
Alignment:
Q  248 aagttttcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggttt 304  Q
    ||||| |||||||| ||||| |||||||| ||| |||| |||| |||||||||||||    
T  34364564 aagttctcgtgagtttaacttagttggtaggaataatgcataatatatacaaggttt 34364508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 46334782 - 46334850
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    ||||||||||| ||||||||||| |||||||||||||||| |  ||||||||| |||  ||||||||||    
T  46334782 taactcagttgataagaacaatgcataaaatatacaaggtctgagattcaaaccccgatcaccataaaa 46334850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 338
Target Start/End: Complemental strand, 9265890 - 9265815
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    |||||||||||||| | ||||||||||| | || |||||| |  ||||||||| |||||||||| |||| ||||||    
T  9265890 taactcagttggtatggacaatgtataatacatgcaaggtctgggattcaaaccccggccaccacaaaaaaaaaaa 9265815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 302
Target Start/End: Original strand, 39949819 - 39949858
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  39949819 taactcagttggtaagaacaatgcataatatatacaaggt 39949858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 338
Target Start/End: Complemental strand, 52262220 - 52262145
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    |||||||||||||| |||||||| ||||||||| ||| |||   | ||||||||||| |||||| |||| ||||||    
T  52262220 taactcagttggtatgaacaatgcataaaatatgcaaagttcgaggttcaaactccgaccaccacaaaaaaaaaaa 52262145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 30678876 - 30678794
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaa 336  Q
    |||||||  |||||||||||||| | |||||| |||| ||||  |||||| ||| |||||||| ||||||||| |||| ||||    
T  30678876 tcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggttcatggttcaaacttcggccaccacaaaaaaaaa 30678794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 32962563 - 32962609
Alignment:
Q  256 gtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    ||||| ||||||||||||||| |||||||| ||||||||| ||||||    
T  32962563 gtgagcataactcagttggtatgaacaatgcataaaatatgcaaggt 32962609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 331
Target Start/End: Complemental strand, 45773606 - 45773528
Alignment:
Q  253 ttcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    |||| ||| ||||||||||||||| | |||||| |||||||||||||| | | || ||||||| ||||| |||| ||||    
T  45773606 ttcgagagcataactcagttggtacggacaatgcataaaatatacaagatctgtggttcaaaccccggctaccaaaaaa 45773528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 45701322 - 45701367
Alignment:
Q  250 gttttcgtgagtataactcagttggtaagaacaatgtataaaatat 295  Q
    |||||||||||| || ||||||||||| |||||||| |||||||||    
T  45701322 gttttcgtgagtttagctcagttggtatgaacaatgcataaaatat 45701367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 7454632 - 7454564
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    ||||||| ||||||   ||||||||||| |||| ||||||| ||||||||||| ||| |||||| ||||    
T  7454632 taactcaattggtatcgacaatgtataatatatgcaaggttcatgattcaaaccccgaccaccacaaaa 7454564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 7550894 - 7550942
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||  ||||||||||| || |||||||| ||||||||||||||||    
T  7550894 tcgtgagcttaactcagttgatatgaacaatgcataaaatatacaaggt 7550942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 14983502 - 14983462
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtt 303  Q
    |||||||||||||||| | |||| |||||||||||||||||    
T  14983502 taactcagttggtaaggaaaatgcataaaatatacaaggtt 14983462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 34707926 - 34707886
Alignment:
Q  255 cgtgagtataactcagttggtaagaacaatgtataaaatat 295  Q
    |||||| ||||||||||||||||| |||||| |||||||||    
T  34707926 cgtgagcataactcagttggtaaggacaatgcataaaatat 34707886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 331
Target Start/End: Original strand, 39302944 - 39303020
Alignment:
Q  255 cgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    |||||| ||| ||||||||||||| |||||  ||||||||| ||||||   || ||||||| |||||||||| ||||    
T  39302944 cgtgagcatagctcagttggtaaggacaatacataaaatatgcaaggtcggtggttcaaaccccggccaccacaaaa 39303020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 41032929 - 41032977
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||  ||||||||||| || |||||||| ||||||||||||||||    
T  41032929 tcgtgagcttaactcagttgatatgaacaatgcataaaatatacaaggt 41032977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 52267762 - 52267810
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||  |||||||||||||||| |||||| ||||||||| ||||||    
T  52267762 tcgtgagcttaactcagttggtaaggacaatgcataaaatatgcaaggt 52267810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 14249 - 14172
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    |||||||| |||||||||||||| |||||||| |||| |||| |||||| | || ||||||| ||| |||||| ||||    
T  14249 tcgtgagtttaactcagttggtatgaacaatgcataatatatgcaaggtatgtggttcaaaccccgaccaccacaaaa 14172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 45309206 - 45309122
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    |||||||  ||||||||||||||  |||||| ||||| |||||||||||||  | ||| |||| ||||||||| |||| ||||||    
T  45309206 tcgtgagcttaactcagttggtataaacaatttataatatatacaaggtttgaggttcgaacttcggccaccacaaaaaaaaaaa 45309122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 326
Target Start/End: Complemental strand, 38573627 - 38573564
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccacca 326  Q
    ||||||||||| ||||||||||| |||| ||||||||||| || ||||| ||| |||| |||||    
T  38573627 taactcagttgataagaacaatgcataatatatacaaggtctaggattcgaaccccggacacca 38573564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 8127461 - 8127511
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggttt 304  Q
    |||||||  |||||||||||||||| |||||| ||||||||| ||||||||    
T  8127461 tcgtgagcttaactcagttggtaaggacaatgcataaaatatgcaaggttt 8127511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 303
Target Start/End: Complemental strand, 28148519 - 28148482
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtt 303  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  28148519 ctcagttggtaagaataatgtataaaatatgcaaggtt 28148482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 39100470 - 39100429
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggttt 304  Q
    ||||||||||| ||||||||||| |||| |||||||||||||    
T  39100470 taactcagttgataagaacaatgcataatatatacaaggttt 39100429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 39869867 - 39869822
Alignment:
Q  257 tgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    ||||| |||||||||||||||| |||||| |||| |||||||||||    
T  39869867 tgagtttaactcagttggtaaggacaatgcataatatatacaaggt 39869822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 303
Target Start/End: Original strand, 41291734 - 41291771
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtt 303  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  41291734 ctcagttggtaagaacaatgaataaaatatgcaaggtt 41291771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 47377412 - 47377363
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtt 303  Q
    |||||||  |||||||||||||||| |||||| |||| ||||||||||||    
T  47377412 tcgtgagcttaactcagttggtaaggacaatgcataatatatacaaggtt 47377363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 48517669 - 48517718
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtt 303  Q
    |||||||| ||||||||||| || |||||||| |||| ||||||||||||    
T  48517669 tcgtgagtttaactcagttgataggaacaatgcataatatatacaaggtt 48517718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 49604995 - 49604922
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaa 336  Q
    |||||||||||| ||| ||||||||||| |||| |||||| ||   ||||||| |||||||||| |||| ||||    
T  49604995 taactcagttggcaaggacaatgtataatatatgcaaggtatagtgttcaaaccccggccaccacaaaaaaaaa 49604922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 18870776 - 18870704
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    ||||||||||| | |||||| |||| |||| ||||||  |||||||||||  ||||||||| |||| ||||||    
T  18870776 ctcagttggtagggacaatgcataatatatgcaaggtccatgattcaaacctcggccaccacaaaaaaaaaaa 18870704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 331
Target Start/End: Complemental strand, 27397674 - 27397598
Alignment:
Q  255 cgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    ||||||| |||||||||||||| | ||||||||||| |||| |||||| || | ||| ||| |||| ||||| ||||    
T  27397674 cgtgagtttaactcagttggtatggacaatgtataatatatgcaaggtctaaggttcgaaccccggacaccacaaaa 27397598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 28244167 - 28244119
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||  |||||||||||||| |||||||| ||||||||| ||||||    
T  28244167 tcgtgagcttaactcagttggtatgaacaatgcataaaatatgcaaggt 28244119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 33771688 - 33771736
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||  |||||||||||||||| ||||||||||| |||| ||||||    
T  33771688 tcgtgagcttaactcagttggtaaggacaatgtataatatatgcaaggt 33771736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0568 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0568
Description:

Target: scaffold0568; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 972 - 913
Alignment:
Q  267 tcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccacca 326  Q
    |||||||||| ||||||| |||||||||| |||||||   |||| |||||||||||||||    
T  972 tcagttggtatgaacaatatataaaatatgcaaggttcgagatttaaactccggccacca 913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 18278321 - 18278274
Alignment:
Q  255 cgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    ||||||| ||||||||||||||||||||||| |||| |||| ||||||    
T  18278321 cgtgagtttaactcagttggtaagaacaatgcataatatatgcaaggt 18278274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 4040425 - 4040380
Alignment:
Q  279 aacaatgtataaaatatacaaggtttatgattcaaactccggccac 324  Q
    ||||||| |||||||||||||| |||  ||||||||||||||||||    
T  4040425 aacaatgcataaaatatacaagatttgagattcaaactccggccac 4040380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 15725378 - 15725329
Alignment:
Q  253 ttcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    ||||||||  |||||||||| ||| ||||||||||||| |||||||||||    
T  15725378 ttcgtgagcttaactcagttagtatgaacaatgtataatatatacaaggt 15725329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 27903111 - 27903188
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaa 331  Q
    |||||||| ||  |||||||||| |||||||| |||| |||| |||||||   | ||||||||||| |||||||||||    
T  27903111 tcgtgagtttagttcagttggtatgaacaatgcataatatatgcaaggttcggggttcaaactccgaccaccataaaa 27903188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 43135007 - 43135048
Alignment:
Q  263 taactcagttggtaagaacaatgtataaaatatacaaggttt 304  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||    
T  43135007 taactcagttggttagaacaatgcataaaatatgcaaggttt 43135048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 4262590 - 4262518
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    |||||||| |||||||||||||||| | ||| |||||||| | || |||||| | |||||| |||| ||||||    
T  4262590 ctcagttgataagaacaatgtataatacatataaggtttaaggtttaaactctgaccaccacaaaaaaaaaaa 4262518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 10032337 - 10032253
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    |||||||  |||||||||||||| | |||||| |||| |||| ||||||||  | ||  |||||||||||||| |||| ||||||    
T  10032337 tcgtgagcttaactcagttggtatggacaatgcataacatatgcaaggtttggggtttgaactccggccaccacaaaaaaaaaaa 10032253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 20175735 - 20175807
Alignment:
Q  266 ctcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    ||||||||||| | ||||||||||| ||||||||| || |   ||| |||||||||||||| |||| ||||||    
T  20175735 ctcagttggtatggacaatgtataatatatacaagattcagagttcgaactccggccaccacaaaaaaaaaaa 20175807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 29178445 - 29178493
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggt 302  Q
    |||||||  |||||||||||||| | |||||| ||||||||||||||||    
T  29178445 tcgtgagcttaactcagttggtatggacaatgcataaaatatacaaggt 29178493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 39917946 - 39917906
Alignment:
Q  255 cgtgagtataactcagttggtaagaacaatgtataaaatat 295  Q
    ||||||| ||||||||||||||||||||||| |||| ||||    
T  39917946 cgtgagtttaactcagttggtaagaacaatgcataatatat 39917906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0777 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 5490 - 5425
Alignment:
Q  248 aagttttcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaa 314  Q
    ||||| |||||||  || ||||||||||| ||| |||| |||||||||||||||||| |||||||||    
T  5490 aagttatcgtgagcttagctcagttggta-gaaaaatgcataaaatatacaaggtttgtgattcaaa 5425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 10819 - 10770
Alignment:
Q  255 cgtgagtataactcagttggtaagaacaatgtataaaatatacaaggttt 304  Q
    ||||||| || ||||||||||||| |||||| ||||||||| ||||||||    
T  10819 cgtgagtttagctcagttggtaaggacaatgcataaaatatgcaaggttt 10770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 338
Target Start/End: Complemental strand, 15993 - 15909
Alignment:
Q  254 tcgtgagtataactcagttggtaagaacaatgtataaaatatacaaggtttatgattcaaactccggccaccataaaagaaaaaa 338  Q
    |||||||  ||||||| |||||||| ||||||||||| |||| |||||| |  | ||||||| || ||||||| |||| ||||||    
T  15993 tcgtgagcttaactcaattggtaaggacaatgtataatatatgcaaggtctggggttcaaaccccagccaccacaaaaaaaaaaa 15909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 303
Target Start/End: Original strand, 19250 - 19286
Alignment:
Q  267 tcagttggtaagaacaatgtataaaatatacaaggtt 303  Q
    |||||||||| |||||||| |||||||||||||||||    
T  19250 tcagttggtaggaacaatgcataaaatatacaaggtt 19286  T

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