View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8732_12 (Length: 335)
Name: NF8732_12
Description: NF8732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8732_12 |
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Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 28139603 - 28139294
Alignment:
| Q |
1 |
atagtcaacatcagattatactgtggatcaccttgatagatggtctacaatgtatgtcgacactttaaaaagtagaagttcacaatcatacttatcatta |
100 |
Q |
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| T |
28139603 |
atagtcaacatcagattatactgtggatcaccttgatagatggtctacaatgtatgtcgacactttaaaaagtagaagttcacaatcatacttatcttta |
28139504 |
T |
|
| Q |
101 |
tacaagtgagatagtgactagatatttgacaaaatcaaaagaaaatgagagtttgttgagttgagtcactcannnnnnnnnnncaaaaattgacaacaat |
200 |
Q |
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| T |
28139503 |
tacaagtgagatagtgacttgatatttgacaaaatcaaaagaaaatgagagtttgttgagttgagtcactcatttttttttt--aaaaattgacaacaat |
28139406 |
T |
|
| Q |
201 |
tatgttaccacgtcactcgttagaatgatgctgatcgtgaacttcttcttccaaaatataccttgagtacattttaagtgttagtctatggcggacacct |
300 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
28139405 |
tatgttaccacgtcactcgttagaatgatgctgatcatgaacttcttcttccaaaatataccttgagtacattttaagtgttagtctatggtggacacct |
28139306 |
T |
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| Q |
301 |
atcaaaatgatg |
312 |
Q |
| |
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|||||||||||| |
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| T |
28139305 |
atcaaaatgatg |
28139294 |
T |
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