View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8732_low_3 (Length: 203)
Name: NF8732_low_3
Description: NF8732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8732_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 17639132 - 17638960
Alignment:
| Q |
19 |
ttggatgcagtggagttgttaatgttattagcatttatatcctcaaaagttgaggcaaccatctaattctacaacatgtgcagattttttggtagatcat |
118 |
Q |
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| T |
17639132 |
ttggatgcagtggagttgttaatgttattagcatttatatcctcaaaagttgaggcaaccatctaattctacaacatgtgcagattttttggtagatcat |
17639033 |
T |
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| Q |
119 |
atttccccaactcttggtgaaaatataatgctcacccaactttaataatgaaatcacatactgacatacctct |
191 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
17639032 |
atttccccaactcttggtgaaaatataatgcttacccaactttaataatgaaatcacatactgacatacctct |
17638960 |
T |
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