View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8737_high_11 (Length: 227)
Name: NF8737_high_11
Description: NF8737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8737_high_11 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 2907921 - 2907694
Alignment:
| Q |
1 |
atttcctattttgaattatgtgcctaatcaatttgtaaaagtagtaactagtgagatttgattctcaatcagtttgaattcataatcagatttgatgcta |
100 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |
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| T |
2907921 |
atttcctattttgaatcatgtgcctaatcaatttgtaaaagtagtaactagtgagatttgattctcaatcagtttgaattcatgatcagatttgatacta |
2907822 |
T |
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| Q |
101 |
acatattgctcaagcatgagtatataactaaaagactcaatcaggtttcaattcactatttacagttaaatatgtatatgaagccagagc-aaaggtaat |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
2907821 |
acatattgctcaagcatgagtatataactaaaagactcaatcaggtttcaattcactatttacagttaaatatgtatatgaagccagagcaaaaggtaat |
2907722 |
T |
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| Q |
200 |
tttggacagaagaaaactatttaatatt |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
2907721 |
cttggacagaagaaaactatttaatatt |
2907694 |
T |
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