View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8738_high_3 (Length: 247)
Name: NF8738_high_3
Description: NF8738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8738_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 42944509 - 42944737
Alignment:
| Q |
1 |
attgtgtggttgttcgattttgatataaaaatgcatatatagtatgaattgtaaattgtttatgccttatatctgagtgcattcaaacgtactcttttgc |
100 |
Q |
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| T |
42944509 |
attgtgtggttgttcgattttgatataaaaatgtatatataatatgaattgtaaattgtttatgccttatatctgagtgcattcaaacgtactcttttgc |
42944608 |
T |
|
| Q |
101 |
aagttgcaccttcttcccaatctcattaggcatcttctcctacacccccattagatagcatccaatggattttaatgcacacattatagatatggtaaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42944609 |
aagttgcaccttcttcccaatctcattaggcatctcctcctacacccccattagatagcatccaatggattttaatgcacacattatagatatggtaaag |
42944708 |
T |
|
| Q |
201 |
agtagtgctatttgcggcgagagatattt |
229 |
Q |
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|||| ||||||||| |||||||||||||| |
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| T |
42944709 |
agtattgctatttgtggcgagagatattt |
42944737 |
T |
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