View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8739_low_1 (Length: 308)

Name: NF8739_low_1
Description: NF8739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8739_low_1
NF8739_low_1
[»] chr2 (27 HSPs)
chr2 (16-185)||(3381492-3381661)
chr2 (213-267)||(9058520-9058574)
chr2 (209-267)||(10249388-10249446)
chr2 (213-267)||(19930826-19930880)
chr2 (209-267)||(32505654-32505712)
chr2 (213-267)||(13438383-13438437)
chr2 (213-267)||(28863495-28863549)
chr2 (209-267)||(4060721-4060779)
chr2 (213-267)||(7465741-7465795)
chr2 (213-267)||(17473060-17473114)
chr2 (213-267)||(27864744-27864798)
chr2 (213-267)||(33436106-33436160)
chr2 (209-267)||(40701514-40701572)
chr2 (216-267)||(3737986-3738037)
chr2 (213-256)||(38882831-38882874)
chr2 (213-267)||(5574494-5574548)
chr2 (209-267)||(28381661-28381719)
chr2 (223-267)||(20700865-20700909)
chr2 (221-267)||(30915511-30915557)
chr2 (213-267)||(40613908-40613962)
chr2 (214-263)||(38732395-38732444)
chr2 (221-267)||(2533171-2533217)
chr2 (221-267)||(38273148-38273194)
chr2 (213-267)||(42257233-42257287)
chr2 (214-263)||(2997497-2997546)
chr2 (214-263)||(43490162-43490211)
chr2 (223-263)||(3034993-3035033)
[»] scaffold0642 (1 HSPs)
scaffold0642 (16-185)||(7273-7443)
[»] scaffold0345 (1 HSPs)
scaffold0345 (16-185)||(17186-17356)
[»] scaffold0105 (1 HSPs)
scaffold0105 (16-185)||(21626-21796)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-185)||(50495-50665)
[»] chr8 (24 HSPs)
chr8 (16-185)||(44498903-44499073)
chr8 (213-267)||(40423949-40424003)
chr8 (209-267)||(504127-504185)
chr8 (213-267)||(12831087-12831141)
chr8 (213-267)||(14547962-14548016)
chr8 (213-267)||(15197373-15197427)
chr8 (209-267)||(23122603-23122661)
chr8 (213-267)||(1179946-1180000)
chr8 (213-267)||(8841438-8841492)
chr8 (213-267)||(10284637-10284691)
chr8 (213-267)||(37038519-37038573)
chr8 (213-267)||(5957870-5957924)
chr8 (213-267)||(34012302-34012356)
chr8 (221-265)||(44507095-44507139)
chr8 (221-267)||(9122233-9122279)
chr8 (221-267)||(15048188-15048234)
chr8 (222-262)||(17443874-17443914)
chr8 (216-267)||(15258935-15258986)
chr8 (216-267)||(42221558-42221609)
chr8 (213-267)||(10621093-10621147)
chr8 (214-256)||(14055609-14055651)
chr8 (213-267)||(43414587-43414641)
chr8 (214-263)||(16056411-16056460)
chr8 (214-263)||(16383418-16383467)
[»] chr4 (24 HSPs)
chr4 (209-267)||(41236383-41236441)
chr4 (213-267)||(48183055-48183109)
chr4 (213-267)||(50052434-50052488)
chr4 (213-267)||(480453-480507)
chr4 (213-267)||(11511468-11511522)
chr4 (213-267)||(29239926-29239980)
chr4 (221-267)||(42044373-42044419)
chr4 (213-267)||(54473539-54473593)
chr4 (224-267)||(29234251-29234294)
chr4 (213-267)||(3481694-3481748)
chr4 (213-267)||(6034084-6034138)
chr4 (213-267)||(24995113-24995167)
chr4 (221-267)||(29977933-29977979)
chr4 (221-267)||(41823930-41823976)
chr4 (213-267)||(23608275-23608329)
chr4 (213-267)||(31910232-31910286)
chr4 (223-265)||(53352574-53352616)
chr4 (222-267)||(28480274-28480319)
chr4 (222-267)||(28481149-28481194)
chr4 (222-267)||(28482024-28482069)
chr4 (214-263)||(47986249-47986298)
chr4 (213-266)||(50526178-50526231)
chr4 (214-263)||(17983753-17983802)
chr4 (214-263)||(50813902-50813951)
[»] chr7 (24 HSPs)
chr7 (16-180)||(30110572-30110731)
chr7 (209-267)||(3694403-3694461)
chr7 (213-267)||(7389429-7389483)
chr7 (209-267)||(19329878-19329936)
chr7 (213-267)||(38267080-38267134)
chr7 (211-267)||(3784033-3784089)
chr7 (209-267)||(4999520-4999578)
chr7 (209-267)||(19436193-19436251)
chr7 (217-267)||(32951499-32951549)
chr7 (213-267)||(36361919-36361973)
chr7 (213-267)||(36362066-36362120)
chr7 (223-267)||(38837267-38837311)
chr7 (213-267)||(3434602-3434656)
chr7 (213-267)||(8080389-8080443)
chr7 (213-263)||(8238253-8238303)
chr7 (213-267)||(35137573-35137627)
chr7 (214-263)||(38044238-38044287)
chr7 (221-267)||(40957755-40957801)
chr7 (214-267)||(16374830-16374883)
chr7 (214-262)||(40846124-40846172)
chr7 (209-263)||(7727942-7727996)
chr7 (221-267)||(35522924-35522970)
chr7 (221-267)||(46374808-46374854)
chr7 (214-267)||(36208214-36208267)
[»] chr5 (18 HSPs)
chr5 (213-267)||(42414308-42414362)
chr5 (213-267)||(13811692-13811746)
chr5 (213-267)||(18520890-18520944)
chr5 (217-267)||(40145451-40145501)
chr5 (213-267)||(2740314-2740368)
chr5 (213-267)||(36732948-36733002)
chr5 (209-267)||(6679734-6679792)
chr5 (213-267)||(14831854-14831908)
chr5 (213-267)||(15409616-15409670)
chr5 (221-267)||(31009036-31009082)
chr5 (219-265)||(31132390-31132436)
chr5 (213-267)||(33149644-33149698)
chr5 (209-267)||(35785235-35785293)
chr5 (213-267)||(28177815-28177869)
chr5 (213-267)||(35943898-35943952)
chr5 (227-264)||(41470425-41470462)
chr5 (214-263)||(2252178-2252227)
chr5 (214-263)||(3921275-3921324)
[»] chr3 (21 HSPs)
chr3 (213-267)||(27714897-27714951)
chr3 (213-267)||(31456729-31456783)
chr3 (213-267)||(33644240-33644294)
chr3 (213-267)||(53982051-53982105)
chr3 (213-267)||(8076433-8076487)
chr3 (209-267)||(17470441-17470499)
chr3 (213-267)||(52629340-52629394)
chr3 (209-267)||(54868901-54868959)
chr3 (213-267)||(49607454-49607508)
chr3 (216-267)||(26754738-26754789)
chr3 (209-267)||(47531901-47531959)
chr3 (222-267)||(11907420-11907465)
chr3 (213-258)||(36707439-36707484)
chr3 (213-267)||(9563039-9563093)
chr3 (213-267)||(11347928-11347982)
chr3 (221-267)||(26141538-26141584)
chr3 (221-267)||(30801739-30801785)
chr3 (213-263)||(48587101-48587151)
chr3 (213-246)||(11095380-11095413)
chr3 (214-267)||(13898061-13898114)
chr3 (214-263)||(36331339-36331388)
[»] chr1 (25 HSPs)
chr1 (209-267)||(38632327-38632385)
chr1 (213-267)||(48716288-48716342)
chr1 (213-267)||(2581955-2582009)
chr1 (216-266)||(11152385-11152435)
chr1 (209-267)||(27564741-27564799)
chr1 (213-267)||(43172-43226)
chr1 (213-267)||(3000359-3000413)
chr1 (213-267)||(8346394-8346448)
chr1 (213-267)||(9474882-9474936)
chr1 (213-267)||(38595194-38595248)
chr1 (221-267)||(44548382-44548428)
chr1 (221-267)||(50630506-50630552)
chr1 (213-267)||(51898689-51898743)
chr1 (213-267)||(13414801-13414855)
chr1 (213-267)||(41758845-41758899)
chr1 (213-267)||(47452326-47452380)
chr1 (213-267)||(49811533-49811587)
chr1 (216-267)||(48489343-48489394)
chr1 (209-263)||(5959010-5959064)
chr1 (221-267)||(32813295-32813341)
chr1 (214-267)||(44334176-44334229)
chr1 (216-267)||(3302539-3302590)
chr1 (213-263)||(26274472-26274522)
chr1 (213-267)||(37649238-37649292)
chr1 (214-263)||(50591010-50591059)
[»] chr6 (15 HSPs)
chr6 (213-267)||(32869718-32869772)
chr6 (211-267)||(17598592-17598648)
chr6 (213-267)||(11427658-11427712)
chr6 (213-267)||(22880664-22880718)
chr6 (213-267)||(23128133-23128187)
chr6 (213-259)||(31109414-31109460)
chr6 (213-267)||(6209471-6209525)
chr6 (214-267)||(28536494-28536545)
chr6 (209-267)||(29857863-29857921)
chr6 (221-263)||(4231596-4231638)
chr6 (221-267)||(31976296-31976342)
chr6 (214-263)||(15508034-15508083)
chr6 (213-262)||(15832617-15832666)
chr6 (214-263)||(15990052-15990101)
chr6 (214-263)||(30341370-30341419)
[»] scaffold0321 (1 HSPs)
scaffold0321 (213-267)||(10115-10169)
[»] scaffold0316 (1 HSPs)
scaffold0316 (216-267)||(17097-17148)
[»] scaffold1268 (1 HSPs)
scaffold1268 (217-267)||(935-985)
[»] scaffold1267 (1 HSPs)
scaffold1267 (217-267)||(935-985)
[»] scaffold0237 (1 HSPs)
scaffold0237 (209-267)||(4065-4123)
[»] scaffold0018 (1 HSPs)
scaffold0018 (214-262)||(152539-152587)


Alignment Details
Target: chr2 (Bit Score: 154; Significance: 1e-81; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 3381492 - 3381661
Alignment:
Q  16 taaaccatgtgaatctgtgatgccatttttatctttttatgaatagcggtgacatccggtgtgagttttctatatcaattcatgtttgctatttctcact 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  3381492 taaaccatgtgaatctgtgatgccatttttatctttttatgaatagcggtgacatccactttgagttttctatatcaattcatgtttgctatttctcact 3381591  T
Q  116 atcaactcatgttttatcgtataaattgtggtccatcatgaatacataattgtataatgtcagcgaacgt 185  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3381592 atcaactcattttttatcgtataaattgtggtccatcatgaatacataattgtataatgtcagcgaacgt 3381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 9058520 - 9058574
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9058520 tttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 9058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 10249446 - 10249388
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  10249446 accttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 10249388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 19930880 - 19930826
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19930880 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacaca 19930826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 32505712 - 32505654
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  32505712 accttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 13438383 - 13438437
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  13438383 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13438437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 28863495 - 28863549
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  28863495 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 28863549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 4060721 - 4060779
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||||||||||||| | ||||| |||||| |||||||    
T  4060721 accttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 7465795 - 7465741
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  7465795 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 7465741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 17473060 - 17473114
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  17473060 tttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 17473114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 27864744 - 27864798
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||| |||||||    
T  27864744 tttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcaca 27864798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 33436160 - 33436106
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  33436160 tttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 40701514 - 40701572
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||||||||| ||||    
T  40701514 accttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 40701572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 3737986 - 3738037
Alignment:
Q  216 gacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcaca 3738037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 38882874 - 38882831
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggacccc 256  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  38882874 tttgacatccacacaaaaatctgacacgtagtcacgtggacccc 38882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 5574548 - 5574494
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  5574548 tttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 5574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 28381719 - 28381661
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||| |||| ||||||||||||||||||||||||||  ||||| |||||||||||||    
T  28381719 acctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcaca 28381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 20700865 - 20700909
Alignment:
Q  223 acacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  20700865 acacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 30915511 - 30915557
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||| |||||||||||||||||||| |||||||||| |||||||||    
T  30915511 ccacataaaaatctgacacgtagtcacgtggaccccgtacaagcaca 30915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 40613962 - 40613908
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||||||||||||||||||| | ||  |||||||||||||||||||    
T  40613962 tttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 40613908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 38732395 - 38732444
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || ||||| |||||||||||||||    
T  38732395 ttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 38732444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 2533171 - 2533217
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||||| ||  | |||||||||||||||||    
T  2533171 ccacacaaaaatctgacacgtagccacatagaccccgcacaagcaca 2533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 38273194 - 38273148
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  38273194 ccacacaaaaatctgacacgtagccacatggaccccgcactagcaca 38273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 42257233 - 42257287
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||| ||||||||||||||| | ||  |||||||||||||||||||    
T  42257233 tttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 2997546 - 2997497
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || | ||| |||||||||||||||    
T  2997546 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 43490162 - 43490211
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || | ||| |||||||||||||||    
T  43490162 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 43490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 3035033 - 3034993
Alignment:
Q  223 acacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||||||||||||| || ||||| |||||||||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaag 3034993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 7273 - 7443
Alignment:
Q  16 taaaccatgtgaatctgtgatgccatttttatctttttatgaatagcggtgacatccggtgt-gagttttctatatcaattcatgtttgctatttctcac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | |||||||| ||||||||||||||||||||||||||||    
T  7273 taaaccatgtgaatctgtgatgccatttttatctttttatgaatagcggtgacatccacttttgagttttccatatcaattcatgtttgctatttctcac 7372  T
Q  115 tatcaactcatgttttatcgtataaattgtggtccatcatgaatacataattgtataatgtcagcgaacgt 185  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  7373 tatcaactcattttttatcgtataaattgtggtccatcatgaatacataattgtattcagtcagcgaacgt 7443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 17186 - 17356
Alignment:
Q  16 taaaccatgtgaatctgtgatgccatttttatctttttatgaatagcggtgacatccggtgt-gagttttctatatcaattcatgtttgctatttctcac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | |||||||| ||||||||||||||||||||||||||||    
T  17186 taaaccatgtgaatctgtgatgccatttttatctttttatgaatagcggtgacatccacttttgagttttccatatcaattcatgtttgctatttctcac 17285  T
Q  115 tatcaactcatgttttatcgtataaattgtggtccatcatgaatacataattgtataatgtcagcgaacgt 185  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  17286 tatcaactcattttttatcgtataaattgtggtccatcatgaatacataattgtattcagtcagcgaacgt 17356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 21796 - 21626
Alignment:
Q  16 taaaccatgtgaatctgtgatgccatttttatctttttatgaatagcggtgacatccggtgt-gagttttctatatcaattcatgtttgctatttctcac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | |||||||| ||||||||||||||||||||||||||||    
T  21796 taaaccatgtgaatctgtgatgccatttttatctttttatgaatagcggtgacatccacttttgagttttccatatcaattcatgtttgctatttctcac 21697  T
Q  115 tatcaactcatgttttatcgtataaattgtggtccatcatgaatacataattgtataatgtcagcgaacgt 185  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  21696 tatcaactcattttttatcgtataaattgtggtccatcatgaatacataattgtattcagtcagcgaacgt 21626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 50665 - 50495
Alignment:
Q  16 taaaccatgtgaatctgtgatgccatttttatctttttatgaatagcggtgacatccggtgt-gagttttctatatcaattcatgtttgctatttctcac 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||| ||||||||    
T  50665 taaaccatgtgaatctctgatgccatttttatctttttatgaatagcggtgacatccacttttgagttttctatatcaattcatgtttgctgtttctcac 50566  T
Q  115 tatcaactcatgttttatcgtataaattgtggtccatcatgaatacataattgtataatgtcagcgaacgt 185  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  50565 tatcaactcattttttatcgtataaattgtggtccatcatgaatacataattgtattcagtcagcgaacgt 50495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 44498903 - 44499073
Alignment:
Q  16 taaaccatgtgaatctgtgatgccatttttatctttttatgaatagcggtgacatccggtgt-gagttttctatatcaattcatgtttgctatttctcac 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||| ||||||||    
T  44498903 taaaccatgtgaatctctgatgccatttttatctttttatgaatagcggtgacatccacttttgagttttctatatcaattcatgtttgctgtttctcac 44499002  T
Q  115 tatcaactcatgttttatcgtataaattgtggtccatcatgaatacataattgtataatgtcagcgaacgt 185  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  44499003 tatcaactcattttttatcgtataaattgtggtccatcatgaatacataattgtattcagtcagcgaacgt 44499073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 40424003 - 40423949
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40424003 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 40423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 504185 - 504127
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  504185 accttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 12831087 - 12831141
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  12831087 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 12831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 14547962 - 14548016
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  14547962 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 14548016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 15197373 - 15197427
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  15197373 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 15197427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 23122661 - 23122603
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||    
T  23122661 accttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 23122603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 1180000 - 1179946
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  1180000 tttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcaca 1179946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 8841492 - 8841438
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  8841492 tttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 10284691 - 10284637
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  10284691 tttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcaca 10284637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 37038519 - 37038573
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  37038519 tttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 37038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 5957870 - 5957924
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  5957870 tttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 34012356 - 34012302
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  34012356 tttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 34012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 44507139 - 44507095
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagca 265  Q
    |||||||||||||||||||||||||| |||||||||| |||||||    
T  44507139 ccacacaaaaatctgacacgtagtcacgtggaccccgtacaagca 44507095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 9122233 - 9122279
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  9122233 ccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 9122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 15048234 - 15048188
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||    
T  15048234 ccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15048188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 17443874 - 17443914
Alignment:
Q  222 cacacaaaaatctgacacgtagtcatgtggaccccgcacaa 262  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  17443874 cacacaaaaatctgacatgtagtcatgtggaccccacacaa 17443914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 15258986 - 15258935
Alignment:
Q  216 gacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||| |||||||||||| || |||| |||||||| |||||||||||    
T  15258986 gacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcaca 15258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 42221558 - 42221609
Alignment:
Q  216 gacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||| |||||||||||||||||||||| |||| ||||||||  |||||||||    
T  42221558 gacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 42221609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 10621147 - 10621093
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||||||||||||||||||||| ||  | || ||||||||||||||    
T  10621147 tttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcaca 10621093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 14055651 - 14055609
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggacccc 256  Q
    ||||||||||||||||||||| ||| ||||||| |||||||||    
T  14055651 ttgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 43414641 - 43414587
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||| |||||| ||||  |||| ||||||||||||||    
T  43414641 tttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 16056460 - 16056411
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || | ||| |||||||||||||||    
T  16056460 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16056411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 16383418 - 16383467
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || | ||| |||||||||||||||    
T  16383418 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16383467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 41236383 - 41236441
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41236383 accttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 41236441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 48183109 - 48183055
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  48183109 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 50052488 - 50052434
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  50052488 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 480507 - 480453
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||    
T  480507 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 11511522 - 11511468
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  11511522 tttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 11511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 29239926 - 29239980
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  29239926 tttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 29239980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 42044419 - 42044373
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  42044419 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 54473593 - 54473539
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  54473593 tttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 54473539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 267
Target Start/End: Complemental strand, 29234294 - 29234251
Alignment:
Q  224 cacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  29234294 cacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 29234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 3481694 - 3481748
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  3481694 tttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcaca 3481748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 6034084 - 6034138
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  6034084 tttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 6034138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 24995167 - 24995113
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||| |||||| ||||||||||||| ||||||||||||||||||||    
T  24995167 tttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 29977933 - 29977979
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  29977933 ccacacaaaaatctgacacgtagtcatatggaccccacacaagcaca 29977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 41823930 - 41823976
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  41823930 ccacacaaaaatctgacacgtagtcacatggaccccgcacaagcaca 41823976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 23608275 - 23608329
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||| || || ||||||||||    
T  23608275 tttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcaca 23608329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 31910232 - 31910286
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||||||||||||||||| ||| ||  |||||||||||||||||||    
T  31910232 tttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcaca 31910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 53352616 - 53352574
Alignment:
Q  223 acacaaaaatctgacacgtagtcatgtggaccccgcacaagca 265  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  53352616 acacaaaaatctgacacgtagttaagtggaccccgcacaagca 53352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 28480319 - 28480274
Alignment:
Q  222 cacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  28480319 cacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28480274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 28481194 - 28481149
Alignment:
Q  222 cacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  28481194 cacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28481149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 28482069 - 28482024
Alignment:
Q  222 cacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  28482069 cacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28482024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 47986249 - 47986298
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    ||||||||||||||||||||||||| || | ||| |||||||||||||||    
T  47986249 ttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaag 47986298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 50526231 - 50526178
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcac 266  Q
    ||||||| ||||||||||||||||||||| |||| |||||  ||||||||||||    
T  50526231 tttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 17983802 - 17983753
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || | ||| |||||||||||||||    
T  17983802 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 17983753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 50813951 - 50813902
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || ||||| || ||||||||||||    
T  50813951 ttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaag 50813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 30110731 - 30110572
Alignment:
Q  16 taaaccatgtgaatctgt-gatgccatttttatctttttatgaatagcggtgacatccggtgtgagttttctatatcaattcatgtttgctatttctcac 114  Q
    |||||||||||||| ||| ||||||||||||||||||||  ||||||  | |||||||  || |   |||||   ||||||||||||||||||||||||     
T  30110731 taaaccatgtgaatatgtagatgccatttttatcttttttagaataggagcgacatccactgag---tttcttactcaattcatgtttgctatttctcag 30110635  T
Q  115 tatcaactcatgttttatcgtataaattgtggtccatcatgaatacataattgtataatgtcagcg 180  Q
    ||||   |||| ||||| ||||| |||||||||||||||||| | ||||| |||||||||||||||    
T  30110634 tatc---tcattttttagcgtatcaattgtggtccatcatgagtgcataactgtataatgtcagcg 30110572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 3694403 - 3694461
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  3694403 accttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcaca 3694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 7389429 - 7389483
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  7389429 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 7389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 19329878 - 19329936
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  19329878 accttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 19329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 38267080 - 38267134
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  38267080 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 3784033 - 3784089
Alignment:
Q  211 cttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  3784033 cttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 3784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 4999578 - 4999520
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  4999578 accttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacaca 4999520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 19436251 - 19436193
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| |||||| |||||||    
T  19436251 accttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcaca 19436193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 32951549 - 32951499
Alignment:
Q  217 acatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  32951549 acatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 32951499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 36361973 - 36361919
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  36361973 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 36362066 - 36362120
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  36362066 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36362120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 38837267 - 38837311
Alignment:
Q  223 acacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  38837267 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 3434602 - 3434656
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  3434602 tttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcaca 3434656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 8080443 - 8080389
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||||||||||||||    
T  8080443 tttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 8080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 8238253 - 8238303
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    ||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  8238253 tttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaag 8238303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 35137573 - 35137627
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  35137573 tttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 38044238 - 38044287
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||    
T  38044238 ttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaag 38044287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 40957755 - 40957801
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||| ||||| |||| |||||||||    
T  40957755 ccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcaca 40957801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 16374883 - 16374830
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||||| |||| ||||| | | ||||||||||    
T  16374883 ttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcaca 16374830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 40846172 - 40846124
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaa 262  Q
    ||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  40846172 ttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaa 40846124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 7727942 - 7727996
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||| ||||||| |||| |||||||||||| || ||||| |||||||||||||||    
T  7727942 acctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaag 7727996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 35522924 - 35522970
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||| | ||| |||| ||||||||||||||    
T  35522924 ccacacaaaaatctgacacgtggccatatggatcccgcacaagcaca 35522970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 46374854 - 46374808
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||| | ||  |||||||||||||||||||    
T  46374854 ccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 36208214 - 36208267
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||| ||||||||||| |||||| || |||| |||||||| |||||||||||    
T  36208214 ttgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcaca 36208267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 42414362 - 42414308
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42414362 tttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 42414308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 13811692 - 13811746
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  13811692 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13811746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 18520944 - 18520890
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  18520944 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 40145451 - 40145501
Alignment:
Q  217 acatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40145451 acatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 40145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 2740314 - 2740368
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  2740314 tttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 2740368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 36733002 - 36732948
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  36733002 tttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcaca 36732948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 6679734 - 6679792
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| ||||||||||||||||||||| ||||  |||||||||||||| ||||    
T  6679734 accttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 6679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 14831854 - 14831908
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  14831854 tttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 14831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 15409670 - 15409616
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||||||||||||||||||||| ||  |||||||||||||||||||    
T  15409670 tttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 31009036 - 31009082
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  31009036 ccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 31009082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 31132390 - 31132436
Alignment:
Q  219 atccacacaaaaatctgacacgtagtcatgtggaccccgcacaagca 265  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  31132390 atccacacaaaaatctgacaagtagtcacgtggaccccgcacaagca 31132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 33149698 - 33149644
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||    
T  33149698 tttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 33149644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 35785235 - 35785293
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| |||||||||||||||||||||||| | ||||| ||||||||| ||||    
T  35785235 accttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcaca 35785293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 28177815 - 28177869
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||||||||||||||||||| ||||  |||||||||||||| ||||    
T  28177815 tttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 28177869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 35943952 - 35943898
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||| | ||||| ||| ||||||||||    
T  35943952 tttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcaca 35943898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 41470462 - 41470425
Alignment:
Q  227 aaaaatctgacacgtagtcatgtggaccccgcacaagc 264  Q
    |||||||||||||||||||| |||||||||||||||||    
T  41470462 aaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 2252227 - 2252178
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || | ||| |||||||||||||||    
T  2252227 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2252178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 3921324 - 3921275
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || | ||| |||||||||||||||    
T  3921324 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 3921275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 27714951 - 27714897
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27714951 tttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 27714897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 31456729 - 31456783
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31456729 tttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 33644240 - 33644294
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  33644240 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 33644294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 53982051 - 53982105
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  53982051 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53982105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 8076433 - 8076487
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  8076433 tttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8076487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 17470441 - 17470499
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  17470441 accttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 17470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 52629340 - 52629394
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||    
T  52629340 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 52629394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 54868959 - 54868901
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||||||||| ||||    
T  54868959 accttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 54868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 49607454 - 49607508
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  49607454 tttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 49607508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 26754738 - 26754789
Alignment:
Q  216 gacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||||| || ||||  |||||||||||||||||||    
T  26754738 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 47531901 - 47531959
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||| |||||||||||| | ||| || ||||||||||||||||    
T  47531901 accttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcaca 47531959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 11907420 - 11907465
Alignment:
Q  222 cacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||    
T  11907420 cacacaaaaatctgacatgtggtcatatggaccccgcacaagcaca 11907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 36707484 - 36707439
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgc 258  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||    
T  36707484 tttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 9563039 - 9563093
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| | |||||||||||||||||||| ||||| || |||||| ||||    
T  9563039 tttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacaca 9563093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 11347982 - 11347928
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||||||||||| | ||  ||||||| ||| |||||||    
T  11347982 tttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcaca 11347928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 26141584 - 26141538
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||| ||||  |||||||| ||||||||||    
T  26141584 ccacacaaaaatctgacacgtggtcacatggaccccacacaagcaca 26141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 30801785 - 30801739
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||| ||||| |||||||| |||||||| ||||||||||    
T  30801785 ccacacaaaaatatgacatgtagtcatatggaccccacacaagcaca 30801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 48587151 - 48587101
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    ||||||| | ||| |||||||||||||||||||| ||||| ||||||||||    
T  48587151 tttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaag 48587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 11095413 - 11095380
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtca 246  Q
    ||||||| ||||||||||||||||||||||||||    
T  11095413 tttgacacccacacaaaaatctgacacgtagtca 11095380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 13898114 - 13898061
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||| ||||| |||||||||||||||  ||||||||||| | ||||||||||    
T  13898114 ttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcaca 13898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 36331388 - 36331339
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || | ||| |||||||||||||||    
T  36331388 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 36331339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 38632385 - 38632327
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38632385 accttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 48716342 - 48716288
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48716342 tttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 2581955 - 2582009
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  2581955 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 2582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 11152435 - 11152385
Alignment:
Q  216 gacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcac 266  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11152435 gacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 27564799 - 27564741
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  27564799 accttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 27564741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 43172 - 43226
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| |||||| |||||||||||||    
T  43172 tttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcaca 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 3000359 - 3000413
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||    
T  3000359 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 3000413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 8346448 - 8346394
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||    
T  8346448 tttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 9474936 - 9474882
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  9474936 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacaca 9474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 38595194 - 38595248
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||    
T  38595194 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 44548428 - 44548382
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  44548428 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 44548382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 50630506 - 50630552
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  50630506 ccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 51898743 - 51898689
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  51898743 tttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 51898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 13414801 - 13414855
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  13414801 tttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 41758845 - 41758899
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||    
T  41758845 tttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacaca 41758899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 47452380 - 47452326
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  47452380 tttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcaca 47452326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 49811587 - 49811533
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||||||||||||| ||| | ||| |||||||||||||    
T  49811587 tttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcaca 49811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 48489343 - 48489394
Alignment:
Q  216 gacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||||| || |||| ||||| ||||||||||||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcaca 48489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 5959064 - 5959010
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||| |||||| |||||||||||||||||| || ||||| |||||||||||||||    
T  5959064 acctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 5959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 32813295 - 32813341
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||    
T  32813295 ccacacaaaaatctgacacgtggtcacatggaccccgcacaagcaca 32813341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 44334229 - 44334176
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||||||||||||| ||||||||||||||  ||||||| |||||| ||||    
T  44334229 ttgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacaca 44334176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 3302590 - 3302539
Alignment:
Q  216 gacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||| |||||||||||||||||||||| |||| ||||||||  |||||||||    
T  3302590 gacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 3302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 26274472 - 26274522
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    ||||||||||||| ||||||||||||| |||||| ||||| || |||||||    
T  26274472 tttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaag 26274522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 37649238 - 37649292
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||||||||||||||||||||| |||| ||| |  |||||||||||||    
T  37649238 tttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 50591059 - 50591010
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || | ||| |||||||||||||||    
T  50591059 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 50591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 32869718 - 32869772
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  32869718 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32869772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 17598592 - 17598648
Alignment:
Q  211 cttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  17598592 cttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 11427658 - 11427712
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  11427658 tttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 11427712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 22880718 - 22880664
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  22880718 tttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcaca 22880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 23128187 - 23128133
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  23128187 tttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 23128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 31109460 - 31109414
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgca 259  Q
    |||||||||||||||||||||||||||||||||| || |||||||||    
T  31109460 tttgacatccacacaaaaatctgacacgtagtcacgtagaccccgca 31109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 6209525 - 6209471
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||||  |||||||||||||| |||||||||| ||||||||||||| ||||||    
T  6209525 tttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcaca 6209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 28536545 - 28536494
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    |||||| ||||||||||||||||||||  |||||||||||||| ||||||||||    
T  28536545 ttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcaca 28536494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 29857863 - 29857921
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||| |||||||||||||||||||||||| | ||||| |||||| |||||||    
T  29857863 accttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 29857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 4231596 - 4231638
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    ||||||||||||||||||||| | ||| |||||||||||||||    
T  4231596 ccacacaaaaatctgacacgtggccatatggaccccgcacaag 4231638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 31976296 - 31976342
Alignment:
Q  221 ccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||| ||||  || ||||||||||||||||    
T  31976296 ccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcaca 31976342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 15508083 - 15508034
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || | ||| |||||||||||||||    
T  15508083 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 15832617 - 15832666
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaa 262  Q
    ||||||| |||||||||||| ||||||||||||| ||||| || ||||||    
T  15832617 tttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 15990101 - 15990052
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || | ||| |||||||||||||||    
T  15990101 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15990052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 30341419 - 30341370
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaag 263  Q
    |||||| |||||||||||||||||| || | ||| |||||||||||||||    
T  30341419 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 30341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 10169 - 10115
Alignment:
Q  213 tttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||| |||||||||||||||||||| ||||||| || |||||||||    
T  10169 tttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcaca 10115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 17097 - 17148
Alignment:
Q  216 gacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||||||||||| || ||||  |||||||||||||||||||    
T  17097 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 17148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 985 - 935
Alignment:
Q  217 acatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||| |||||||||||||| ||| | ||||||||||||||    
T  985 acatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 985 - 935
Alignment:
Q  217 acatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||||||||||| |||||||||||||| ||| | ||||||||||||||    
T  985 acatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

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Target: scaffold0237 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 4065 - 4123
Alignment:
Q  209 accttttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 267  Q
    ||||||| ||| |||||||||||||||||||||||| | ||||| |||||| |||||||    
T  4065 accttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4123  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 152539 - 152587
Alignment:
Q  214 ttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaa 262  Q
    |||||| |||||||||||||||||| || ||||| |||| |||||||||    
T  152539 ttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaa 152587  T

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