View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8741_high_3 (Length: 579)

Name: NF8741_high_3
Description: NF8741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8741_high_3
NF8741_high_3
[»] chr7 (35 HSPs)
chr7 (1-568)||(4828664-4829231)
chr7 (50-380)||(30405518-30405849)
chr7 (111-400)||(24596843-24597135)
chr7 (106-282)||(17881457-17881635)
chr7 (142-376)||(29544533-29544771)
chr7 (59-237)||(37144851-37145029)
chr7 (95-374)||(7372434-7372710)
chr7 (60-211)||(9755732-9755883)
chr7 (60-211)||(9800529-9800679)
chr7 (60-237)||(7361638-7361816)
chr7 (142-308)||(3268898-3269066)
chr7 (142-376)||(23124914-23125152)
chr7 (142-284)||(1074466-1074611)
chr7 (59-171)||(8606001-8606112)
chr7 (142-308)||(1255145-1255314)
chr7 (146-412)||(18496583-18496852)
chr7 (143-232)||(22067817-22067906)
chr7 (60-308)||(4977752-4978004)
chr7 (191-380)||(8308895-8309083)
chr7 (144-308)||(20461580-20461746)
chr7 (65-123)||(21543071-21543129)
chr7 (146-232)||(21545810-21545896)
chr7 (145-308)||(7142115-7142281)
chr7 (236-379)||(3487228-3487370)
chr7 (153-268)||(5312758-5312875)
chr7 (142-375)||(20470674-20470911)
chr7 (323-376)||(20017151-20017204)
chr7 (336-375)||(7815534-7815573)
chr7 (323-374)||(21545692-21545743)
chr7 (323-376)||(22067666-22067719)
chr7 (336-376)||(315384-315424)
chr7 (194-283)||(12358719-12358810)
chr7 (142-237)||(315199-315294)
chr7 (194-308)||(9761347-9761464)
chr7 (143-231)||(46054713-46054801)
[»] chr8 (34 HSPs)
chr8 (60-459)||(30543695-30544095)
chr8 (59-378)||(11437350-11437673)
chr8 (142-378)||(29291785-29292023)
chr8 (115-356)||(13583403-13583637)
chr8 (95-232)||(24584735-24584872)
chr8 (142-231)||(14977118-14977208)
chr8 (151-368)||(14424684-14424904)
chr8 (142-376)||(16052140-16052378)
chr8 (146-380)||(22894391-22894627)
chr8 (142-380)||(32239301-32239543)
chr8 (170-412)||(5153800-5154045)
chr8 (142-376)||(12956503-12956733)
chr8 (198-308)||(28074583-28074695)
chr8 (143-285)||(35135376-35135522)
chr8 (146-298)||(10867006-10867160)
chr8 (59-279)||(31436410-31436632)
chr8 (142-380)||(27097661-27097902)
chr8 (151-285)||(28260245-28260381)
chr8 (142-379)||(28291961-28292200)
chr8 (145-277)||(6888156-6888287)
chr8 (142-372)||(28901217-28901441)
chr8 (151-278)||(12774805-12774935)
chr8 (60-237)||(30851105-30851282)
chr8 (342-400)||(12357696-12357754)
chr8 (342-400)||(12358824-12358882)
chr8 (323-376)||(16054492-16054545)
chr8 (143-226)||(5570158-5570241)
chr8 (323-374)||(13081800-13081851)
chr8 (333-380)||(31436678-31436724)
chr8 (323-376)||(11310120-11310172)
chr8 (142-230)||(24120245-24120334)
chr8 (142-231)||(28902103-28902192)
chr8 (323-376)||(28902287-28902340)
chr8 (335-379)||(30850960-30851004)
[»] chr3 (36 HSPs)
chr3 (59-358)||(28422384-28422685)
chr3 (132-413)||(18474175-18474458)
chr3 (110-356)||(11474828-11475078)
chr3 (142-308)||(26297763-26297929)
chr3 (110-263)||(26387822-26387977)
chr3 (60-308)||(21829065-21829315)
chr3 (144-379)||(19219071-19219310)
chr3 (323-413)||(19542950-19543040)
chr3 (142-308)||(8402484-8402651)
chr3 (151-308)||(25919403-25919556)
chr3 (151-295)||(33577757-33577903)
chr3 (151-257)||(19545967-19546075)
chr3 (158-256)||(30493249-30493349)
chr3 (143-307)||(33914500-33914662)
chr3 (142-230)||(1475293-1475381)
chr3 (205-284)||(26797205-26797285)
chr3 (142-237)||(11521154-11521248)
chr3 (145-231)||(13911282-13911368)
chr3 (159-380)||(23908130-23908354)
chr3 (323-376)||(25883301-25883354)
chr3 (151-226)||(27374468-27374543)
chr3 (323-380)||(5632402-5632459)
chr3 (162-286)||(5632496-5632614)
chr3 (186-231)||(25188815-25188860)
chr3 (145-237)||(23007071-23007163)
chr3 (236-308)||(26418830-26418902)
chr3 (329-376)||(18066001-18066048)
chr3 (339-374)||(19263769-19263804)
chr3 (323-376)||(1475143-1475196)
chr3 (60-105)||(5632628-5632673)
chr3 (323-376)||(10341985-10342038)
chr3 (112-298)||(19285084-19285271)
chr3 (143-231)||(2729630-2729718)
chr3 (333-377)||(8402413-8402457)
chr3 (336-376)||(11521376-11521416)
chr3 (196-304)||(27415236-27415347)
[»] chr1 (34 HSPs)
chr1 (60-380)||(52271104-52271426)
chr1 (75-398)||(26854161-26854485)
chr1 (151-380)||(19257665-19257895)
chr1 (145-379)||(15298731-15298967)
chr1 (110-380)||(25126462-25126735)
chr1 (151-380)||(26102080-26102312)
chr1 (151-376)||(11769857-11770086)
chr1 (142-376)||(23223425-23223665)
chr1 (142-371)||(25494357-25494580)
chr1 (142-376)||(30675498-30675735)
chr1 (99-413)||(21548619-21548936)
chr1 (142-376)||(26657490-26657727)
chr1 (152-358)||(25727790-25728000)
chr1 (152-358)||(25736198-25736408)
chr1 (110-295)||(18795163-18795350)
chr1 (146-232)||(19884190-19884276)
chr1 (158-307)||(27461114-27461266)
chr1 (316-379)||(23505947-23506010)
chr1 (151-300)||(25730511-25730663)
chr1 (142-231)||(50047195-50047284)
chr1 (194-350)||(31313618-31313777)
chr1 (142-237)||(8247663-8247758)
chr1 (142-224)||(12810336-12810418)
chr1 (146-232)||(18391100-18391186)
chr1 (323-376)||(12423778-12423831)
chr1 (154-248)||(15416966-15417062)
chr1 (336-376)||(30781971-30782011)
chr1 (333-380)||(25665629-25665676)
chr1 (153-231)||(12423926-12424004)
chr1 (191-233)||(23519768-23519810)
chr1 (323-376)||(9328365-9328418)
chr1 (323-376)||(23519632-23519685)
chr1 (112-192)||(21550930-21551010)
chr1 (336-376)||(50047386-50047426)
[»] chr5 (32 HSPs)
chr5 (114-374)||(19331497-19331759)
chr5 (59-237)||(23157794-23157975)
chr5 (60-294)||(20694572-20694808)
chr5 (145-379)||(7742730-7742967)
chr5 (145-412)||(19763713-19763988)
chr5 (142-308)||(26070488-26070656)
chr5 (142-302)||(24841767-24841930)
chr5 (194-376)||(26329933-26330116)
chr5 (204-376)||(11274193-11274369)
chr5 (145-237)||(18222510-18222602)
chr5 (110-247)||(20083448-20083586)
chr5 (205-368)||(25367671-25367836)
chr5 (151-376)||(17027550-17027778)
chr5 (142-376)||(25594556-25594793)
chr5 (143-375)||(16622541-16622767)
chr5 (142-301)||(24410869-24411030)
chr5 (148-237)||(25680616-25680705)
chr5 (145-237)||(16634063-16634155)
chr5 (142-226)||(17382052-17382136)
chr5 (194-380)||(18178166-18178357)
chr5 (60-183)||(22643924-22644047)
chr5 (142-237)||(24517368-24517463)
chr5 (289-379)||(18872912-18873002)
chr5 (154-228)||(24268581-24268655)
chr5 (154-228)||(24345210-24345284)
chr5 (143-237)||(15205658-15205752)
chr5 (63-129)||(25367555-25367621)
chr5 (323-398)||(22643746-22643821)
chr5 (142-231)||(12340026-12340115)
chr5 (169-237)||(11997900-11997968)
chr5 (342-374)||(18452677-18452709)
chr5 (339-375)||(30072330-30072366)
[»] chr2 (31 HSPs)
chr2 (60-308)||(19540969-19541219)
chr2 (60-211)||(29647577-29647728)
chr2 (142-303)||(21849011-21849174)
chr2 (60-237)||(27917989-27918165)
chr2 (146-412)||(18236130-18236399)
chr2 (72-308)||(24047326-24047564)
chr2 (205-375)||(17415028-17415201)
chr2 (71-263)||(22388735-22388924)
chr2 (116-227)||(17415211-17415322)
chr2 (142-237)||(21843008-21843103)
chr2 (95-284)||(22510914-22511104)
chr2 (203-380)||(27417122-27417303)
chr2 (151-380)||(34063700-34063937)
chr2 (154-379)||(18818723-18818956)
chr2 (236-380)||(14921898-14922043)
chr2 (142-226)||(21844646-21844730)
chr2 (146-285)||(17240812-17240950)
chr2 (146-301)||(21505078-21505236)
chr2 (142-237)||(35031716-35031811)
chr2 (142-227)||(17152167-17152252)
chr2 (155-380)||(24187993-24188224)
chr2 (194-247)||(30705268-30705321)
chr2 (236-378)||(1732661-1732804)
chr2 (155-295)||(39730474-39730616)
chr2 (145-375)||(30998788-30999021)
chr2 (323-376)||(16593614-16593667)
chr2 (323-380)||(22525679-22525736)
chr2 (110-230)||(32276526-32276646)
chr2 (142-232)||(28278434-28278524)
chr2 (323-376)||(25474235-25474288)
chr2 (203-231)||(15829205-15829233)
[»] chr4 (33 HSPs)
chr4 (203-379)||(17187250-17187427)
chr4 (95-379)||(19601765-19602052)
chr4 (205-380)||(31859760-31859938)
chr4 (60-380)||(29437401-29437716)
chr4 (151-380)||(23353646-23353873)
chr4 (154-308)||(10576479-10576635)
chr4 (110-399)||(21077215-21077507)
chr4 (142-308)||(9288224-9288392)
chr4 (110-279)||(21167711-21167883)
chr4 (142-376)||(34864159-34864392)
chr4 (194-376)||(15192269-15192454)
chr4 (60-259)||(22119578-22119779)
chr4 (142-237)||(1676301-1676396)
chr4 (142-237)||(1682829-1682924)
chr4 (142-295)||(17339760-17339914)
chr4 (142-302)||(25315169-25315332)
chr4 (146-376)||(27302796-27303028)
chr4 (167-378)||(13064465-13064679)
chr4 (142-232)||(9782994-9783084)
chr4 (194-376)||(17026560-17026745)
chr4 (145-284)||(26159773-26159914)
chr4 (146-285)||(46647214-46647354)
chr4 (205-380)||(33519107-33519285)
chr4 (250-376)||(47024629-47024755)
chr4 (155-376)||(1695710-1695935)
chr4 (171-237)||(10320225-10320291)
chr4 (194-237)||(1673826-1673869)
chr4 (142-214)||(12111360-12111433)
chr4 (155-232)||(18444277-18444354)
chr4 (335-376)||(18898192-18898233)
chr4 (323-376)||(51884800-51884853)
chr4 (323-371)||(5906631-5906679)
chr4 (169-263)||(20044219-20044315)
[»] scaffold0065 (2 HSPs)
scaffold0065 (59-182)||(12033-12156)
scaffold0065 (212-415)||(12328-12534)
[»] scaffold0190 (1 HSPs)
scaffold0190 (60-373)||(11564-11880)
[»] scaffold0337 (2 HSPs)
scaffold0337 (66-182)||(1604-1720)
scaffold0337 (325-415)||(2008-2098)
[»] chr6 (19 HSPs)
chr6 (66-182)||(24507645-24507761)
chr6 (151-376)||(17860312-17860540)
chr6 (205-380)||(26499706-26499884)
chr6 (194-279)||(9943111-9943198)
chr6 (142-263)||(26512755-26512878)
chr6 (142-263)||(26517871-26517994)
chr6 (325-415)||(24507267-24507357)
chr6 (323-376)||(15575122-15575175)
chr6 (206-350)||(9396496-9396642)
chr6 (151-284)||(16439482-16439616)
chr6 (142-286)||(14768223-14768369)
chr6 (265-375)||(30355456-30355567)
chr6 (142-301)||(32930412-32930573)
chr6 (142-227)||(13759467-13759552)
chr6 (194-308)||(12972317-12972433)
chr6 (323-376)||(15998708-15998761)
chr6 (146-231)||(20495806-20495890)
chr6 (326-422)||(14768093-14768189)
chr6 (205-278)||(22559176-22559250)
[»] scaffold0185 (2 HSPs)
scaffold0185 (142-299)||(1457-1616)
scaffold0185 (334-379)||(2709-2754)
[»] scaffold0171 (2 HSPs)
scaffold0171 (156-374)||(21425-21647)
scaffold0171 (145-214)||(6213-6282)
[»] scaffold0043 (1 HSPs)
scaffold0043 (71-414)||(58688-59038)
[»] scaffold0011 (1 HSPs)
scaffold0011 (132-379)||(228047-228295)
[»] scaffold0188 (1 HSPs)
scaffold0188 (191-375)||(26819-27007)
[»] scaffold1149 (2 HSPs)
scaffold1149 (335-378)||(1997-2040)
scaffold1149 (65-182)||(1723-1839)
[»] scaffold1026 (1 HSPs)
scaffold1026 (145-226)||(1850-1931)
[»] scaffold0386 (1 HSPs)
scaffold0386 (198-295)||(13016-13116)
[»] scaffold0836 (1 HSPs)
scaffold0836 (320-380)||(2803-2863)
[»] scaffold0282 (1 HSPs)
scaffold0282 (326-376)||(22477-22527)
[»] scaffold0362 (1 HSPs)
scaffold0362 (323-376)||(7817-7870)


Alignment Details
Target: chr7 (Bit Score: 536; Significance: 0; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 536; E-Value: 0
Query Start/End: Original strand, 1 - 568
Target Start/End: Original strand, 4828664 - 4829231
Alignment:
Q  1 aaatttagaataaaagtggagaattgttgaattttaactcaaagtttgatgttggtgcttgatgatggaataacatatgatatttttagctttattttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4828664 aaatttagaataaaagtggagaattgttgaattttaactcaaagtttgatgttggtgcttgatgatggaataacatatgatatttttagctttattttta 4828763  T
Q  101 gtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4828764 gtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaat 4828863  T
Q  201 ttacttttatcctaaatcatgcaactccatagttgttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgagga 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  4828864 ttacttttatcctaaatcatgcaactccatagttgttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatattacacgacggatcgagga 4828963  T
Q  301 taagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatg 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4828964 taagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaacg 4829063  T
Q  401 gccgaaaaagggtcgtaagctgctaaaatcgcacatgaggggagtgcctcatgagcccctgcggataaagccacacacccttcacatgggataatattgc 500  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||     
T  4829064 gccgaaaaagggtcgtaagctgctgaaatcgcacatgaggggagtgcctcatgagcctctgcggataaagccacccacccttcacatgggataatattgt 4829163  T
Q  501 ctacttccccacgtgcccctacgcaccaaaccatgtgcctcacgtatggacacggccttgatgtccat 568  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4829164 ctacttccccatgtgcccctacgcaccaaaccatgtgcctcacgtatggacacggccttgatgtccat 4829231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 50 - 380
Target Start/End: Original strand, 30405518 - 30405849
Alignment:
Q  50 tgttggtgcttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagtt 149  Q
    ||||||| | |||||||||||||||||||||||||||| ||| | ||| |||||||||| |||||||||||||| |||||  ||||| ||| ||||||||    
T  30405518 tgttggtacatgatgatggaataacatatgatattttttgctatgtttctagtgtaattctttgcatttgaaggtaaattagaagtcaattagaggagtt 30405617  T
Q  150 ttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttt 247  Q
     | ||||||||||||||||||||||||| |||||| | || ||||||||||| || ||||||||||| ||||||||||||||| ||  |||||| |||||    
T  30405618 gttaatggtttgaggaactttttgtattgtttttatttgactcattgtaattcac-tttatcctaaaccatgcaactccataggtgttttgagt-ttttt 30405715  T
Q  248 aatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatga-tcttagaagttatttgaagacaat 346  Q
    | |||||||||||||| ||||  |||| |||| ||||   ||||||||||||||| |||||   || |||||||| ||||||||| |||||||| |||||    
T  30405716 agtgagaaatcatgtaaatcggcaaaataagaaatcatgtgaaggatcgaggatatgaagattgaagttcaatgattcttagaaggtatttgaatacaat 30405815  T
Q  347 acaaagtgaagataattcatttcaagttccaagg 380  Q
    |||||||||| | ||||| ||| || ||||||||    
T  30405816 acaaagtgaatacaattcgtttgaaattccaagg 30405849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 111 - 400
Target Start/End: Complemental strand, 24597135 - 24596843
Alignment:
Q  111 ttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttat 210  Q
    |||||||||||||||||||  ||||| ||| || ||||| |||||||||||| | | |||||| ||| |||| |   || || |||||||| | ||||||    
T  24597135 ttgcatttgaaggaaaattagaagtcaattagaagagttgtcaatggtttgatggagtttttgcattgttttgatctgagtcgttgtaattcaattttat 24597036  T
Q  211 cctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    |||||||||||||||||| ||| ||  || |||||||||| ||||||||| |||| ||||  ||||||||| |||||  | | |||||||||||  ||||    
T  24597035 cctaaatcatgcaactccgtaggtgttttaagtctttttagtgagaaatcgtgtaaatcggcaaaacaagacatcacgtggaagatcgaggatataaaga 24596936  T
Q  309 cgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatg 400  Q
       || |||| | | || ||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||| |||  |||| |||||||||    
T  24596935 ttgaagttcagtggttcatagaagaaatttgaagacaatacaaagtgaagaaaattcatttgaagttccaaggcattgcaagacgaaagaatg 24596843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 106 - 282
Target Start/End: Complemental strand, 17881635 - 17881457
Alignment:
Q  106 attatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttact 205  Q
    |||||||||||||||||| |||||  |||||  ||  ||||||| |||||| ||| |||||||||||||||| |||| | |||| ||||||||||||| |    
T  17881635 attatttgcatttgaaggcaaattagaagtcatttaaaggagttgtcaatgattttaggaactttttgtattattttcattcgaatcattgtaatttaat 17881536  T
Q  206 tttatcctaaatcatgcaactccatag--ttgttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatat 282  Q
    |||||| ||||||||||||||  ||||   | ||||||||||||| |||||| ||||||| |||| |||||||||||||    
T  17881535 tttatcataaatcatgcaacttaataggtattttgagtctttttagtgagaagtcatgtaaatcggaaaaacaagatat 17881457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 142 - 376
Target Start/End: Original strand, 29544533 - 29544771
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 239  Q
    |||||||| ||||| ||||||||||| | ||||||| |||| | |||| || |||||||| |||||| ||||||||  ||||| ||||||  ||||  ||    
T  29544533 gaggagttgtcaatagtttgaggaacatattgtattgttttcactcgagtcgttgtaattcacttttctcctaaattgtgcaattccataagtgttttga 29544632  T
Q  240 gtctttttaa-tgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttattt 337  Q
    || ||||| | | || ||||||||| ||||| ||| ||||| |||||| |||||||| | |||| |||||   ||  |||||||| |||||||| | |||    
T  29544633 gtgttttttagtaaggaatcatgtaaatcgacaaaccaagacatcacatgaaggatcaaagatatgaagattgaagatcaatgattcttagaaggttttt 29544732  T
Q  338 gaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  29544733 gaagacaatacaaagtgaagaaaattcatttcaagttcc 29544771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 59 - 237
Target Start/End: Original strand, 37144851 - 37145029
Alignment:
Q  59 ttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggt 158  Q
    ||||||||||||||||||||||| | |||| || | |||||||| ||||| |||| ||||||||| |||||  ||||| ||| |||||||| ||| || |    
T  37144851 ttgatgatggaataacatatgatgtatttaactatgtttttagtataattctttggatttgaaggcaaatttgaagtcaattagaggagttgtcattgtt 37144950  T
Q  159 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    ||||  ||||||||||||| |||| | || | || ||||||| || |||||||||||||||||||||||| ||| ||||    
T  37144951 ttgaaaaactttttgtattattttcattcaagtcgttgtaatatatttttatcctaaatcatgcaactccgtaggtgtt 37145029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 95 - 374
Target Start/End: Complemental strand, 7372710 - 7372434
Alignment:
Q  95 tttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcat 194  Q
    |||||||||||||| |||||||||||||| |||||  ||    ||| |||||||| ||| |||||||| |||||||||||||| |||| | |||| || |    
T  7372710 tttttagtgtaattctttgcatttgaaggtaaattagaa----attagaggagttgtcattggtttgatgaactttttgtattgttttcattcgagtcgt 7372615  T
Q  195 tgtaatttacttttatc-ctaaatcatgcaactccatagttg--ttgagt-ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaa 290  Q
    ||||||| | ||||||| | ||||||||||||| ||||| ||  || |||  |||||| ||||||||| |||| |||   ||| ||||||||  || |||    
T  7372614 tgtaattcaattttatcacgaaatcatgcaacttcataggtgttttcagtgttttttagtgagaaatcttgtaaatcagcaaatcaagatat--catgaa 7372517  T
Q  291 ggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagtt 374  Q
    ||||| ||||||  |||  | || ||||||||||||||||| | ||| |||||||||| ||||||||| |||| ||||||||||    
T  7372516 ggatcaaggatataaagctggaagttcaatgatcttagaagatttttaaagacaatac-aagtgaagaaaatttatttcaagtt 7372434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 60 - 211
Target Start/End: Original strand, 9755732 - 9755883
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 159  Q
    |||||||| ||||||||||||||||| ||||| | |||||||| || ||  ||||||||||||| |||||  ||||| ||| ||||| || ||| | |||    
T  9755732 tgatgatgaaataacatatgatatttgtagctatgtttttagtatattttcttgcatttgaaggcaaattataagtcaattagaggaattgtcactagtt 9755831  T
Q  160 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatc 211  Q
    |||||||| ||||||||| |||| | |||| || ||||||||||||||||||    
T  9755832 tgaggaacgttttgtatttttttcactcgagtcgttgtaatttacttttatc 9755883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 60 - 211
Target Start/End: Original strand, 9800529 - 9800679
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 159  Q
    |||||||||||||||||||||||||| |||| |  |||||||| || ||  |||||||||||||||||||  ||||| ||| ||||| || ||| | |||    
T  9800529 tgatgatggaataacatatgatatttgtagcatg-tttttagtatattttcttgcatttgaaggaaaattataagtcaattagaggaattgtcactagtt 9800627  T
Q  160 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatc 211  Q
    |||||||| ||||||||| |||| | |||| || ||||||||||||||||||    
T  9800628 tgaggaacgttttgtatttttttcactcgagtcgttgtaatttacttttatc 9800679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 7361816 - 7361638
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 159  Q
    |||||||| ||  ||||||||| ||| || || | ||| |||||||||| ||||||||| |||| ||||| ||| |||||| |||||||| ||| |||||    
T  7361816 tgatgatgaaaatacatatgatctttctaactatgtttctagtgtaattctttgcattttaaggcaaattaaaaatctattagaggagttgtcattggtt 7361717  T
Q  160 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatc-ctaaatcatgcaactccatagttgtt 237  Q
     || |||||||||||| | |||| | |||| ||||||||| | ||||||||| ||||||||||||||||| ||| ||||    
T  7361716 cgatgaactttttgtaatgttttcattcgagtcattgtaactcacttttatcactaaatcatgcaactccgtagatgtt 7361638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 142 - 308
Target Start/End: Complemental strand, 3269066 - 3268898
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttg--a 239  Q
    |||||||| ||| ||||||||| ||| ||||||||| ||||   | || |  |||||||| |||||||||||||||||||||||| | ||  ||||   |    
T  3269066 gaggagttgtcattggtttgagtaacattttgtattgttttcgtttgagttgttgtaattcacttttatcctaaatcatgcaacttcgtatgtgttttaa 3268967  T
Q  240 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    ||||||||| |||||||||||||| ||||  |||||||||||||||| |||||||| || ||| |||||    
T  3268966 gtctttttagtgagaaatcatgtaaatcggcaaaacaagatatcacatgaaggatcaagtatatgaaga 3268898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 142 - 376
Target Start/End: Original strand, 23124914 - 23125152
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 239  Q
    |||||||| | | |||| |||||||| | ||||||| |||| | |||| || |||||||| || ||||||| ||||||| |||||| |||| ||||  ||    
T  23124914 gaggagttgttagtggtctgaggaacatattgtattgttttcactcgagtcgttgtaattcacatttatccaaaatcatacaactctataggtgttttga 23125013  T
Q  240 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttattt 337  Q
    || |||| || |||||||||||||| |||||  || ||||| ||||   ||||||||||||||| |||||   || |||||| | ||||| ||| |  ||    
T  23125014 gtgttttctagtgagaaatcatgtaaatcgaccaatcaagacatcatgtgaaggatcgaggatatgaagattgaagttcaatggttcttataagattctt 23125113  T
Q  338 gaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
     |||||||||||||||||||| |||||||||||| ||||    
T  23125114 aaagacaatacaaagtgaagaaaattcatttcaaattcc 23125152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 142 - 284
Target Start/End: Original strand, 1074466 - 1074611
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 239  Q
    |||||||| |||||||||||||||||   ||||||| |||| | ||||||||||||||||| |||||||||||||| || ||||||||||  ||  |||     
T  1074466 gaggagttgtcaatggtttgaggaaccaattgtattattttcattcgattcattgtaatttgcttttatcctaaattatacaactccataagtgttttgt 1074565  T
Q  240 gtc-tttttaatgagaaatcatgtagatcgaaaaaacaagatatca 284  Q
    ||| |||||| |||||||||||||| || | |||| ||||| ||||    
T  1074566 gtcttttttagtgagaaatcatgtaaattggaaaagcaagacatca 1074611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 8606001 - 8606112
Alignment:
Q  59 ttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggt 158  Q
    ||||||||||||||||||||||| |||| |||| | ||||||||    |||||||| ||| ||||||||||  || || ||| |||||||||||||||||    
T  8606001 ttgatgatggaataacatatgatgtttt-agctatgtttttagttattttatttgcgtttaaaggaaaattagaaatcaattagaggagttttcaatggt 8606099  T
Q  159 ttgaggaactttt 171  Q
    |||||||||||||    
T  8606100 ttgaggaactttt 8606112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 308
Target Start/End: Complemental strand, 1255314 - 1255145
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 239  Q
    |||||||| ||||||||||||||||    ||||||| |||| | |||| ||||||||||| | |||||||||||||||||||||| ||||| ||  ||||    
T  1255314 gaggagttgtcaatggtttgaggaataaattgtattgttttcactcgagtcattgtaattcatttttatcctaaatcatgcaacttcataggtgttttga 1255215  T
Q  240 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    || |||| |||||| |||| || || ||| | ||| ||| | |||||| |||||||| |||||| |||||    
T  1255214 gtgttttgtaatgaaaaattatttaaatcaacaaatcaaaacatcacatgaaggatcaaggatacgaaga 1255145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 412
Target Start/End: Original strand, 18496583 - 18496852
Alignment:
Q  146 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtct 243  Q
    |||| ||||| |||||||||||| |||| ||| |||| | |||| ||||||||||| | |||||||||||||||||| ||| ||||| ||  ||||| ||    
T  18496583 agttgtcaattgtttgaggaactatttgaattgttttcattcgaatcattgtaattcatttttatcctaaatcatgcgacttcataggtgttttgagcct 18496682  T
Q  244 ttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga-cgaaaattcaatgatcttagaagttatttgaaga 342  Q
     |||  ||||| |||||||| |||| ||||||  || |||    |||||||| |||||| |||||  ||| | | |  | ||||||||  |  |||||||    
T  18496683 atttggtgagatatcatgtaaatcggaaaaacgggacatcgagtgaaggatcaaggatatgaagattgaagaataatggttcttagaatgttgttgaaga 18496782  T
Q  343 caatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaaggg 412  Q
     |||||||  |||||| ||||||||||||||||||||| |||  |||| | ||||| || ||||||||||    
T  18496783 aaatacaagatgaagaaaattcatttcaagttccaaggcatttcaagacgtaagaacggtcgaaaaaggg 18496852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 22067906 - 22067817
Alignment:
Q  143 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 232  Q
    ||||||| ||||||||||||||||| |  |||||| |||| | |||| ||||||||||| | |||||||||| |||||||||||||||||    
T  22067906 aggagttgtcaatggtttgaggaacataatgtattgttttcactcgagtcattgtaattcaattttatcctagatcatgcaactccatag 22067817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 308
Target Start/End: Complemental strand, 4978004 - 4977752
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatt--tgcatttgaaggaaaattgaaagtctatttgaggagttttcaatgg 157  Q
    |||||| |||||| || ||||||||||||||| | |||| ||| || || ||  ||||||| |||| |||||  ||||| |||  ||||||| ||| |||    
T  4978004 tgatgacggaataccacatgatatttttagctatgtttt-agtatattttttcttgcatttaaaggtaaattataagtcaattaaaggagttgtcattgg 4977906  T
Q  158 tttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgag---tctttttaatgaga 254  Q
    ||||| ||| |||||||||| || | | || | || |||||||| ||||||||||||||| |||||||| |||||  |||| |     ||| || |||||    
T  4977905 tttgaagaattttttgtatttttatcattcaagtcgttgtaattcacttttatcctaaattatgcaacttcatagaggttgtgagcggtttatagtgaga 4977806  T
Q  255 aatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    ||||||||| ||  | ||| ||||| |||||| ||||||||||||||| |||||    
T  4977805 aatcatgtaaatatacaaatcaagacatcacatgaaggatcgaggatatgaaga 4977752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 191 - 380
Target Start/End: Complemental strand, 8309083 - 8308895
Alignment:
Q  191 tcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacg 288  Q
    ||||||| ||||| |||||||||||||||||||||||||||  ||  ||||||||||||| | |||||||||||| |||   ||||||||| |||||  |    
T  8309083 tcattgtgatttagttttatcctaaatcatgcaactccatacatgttttgagtctttttagtaagaaatcatgtaaatcagcaaaacaagacatcacgtg 8308984  T
Q  289 aaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
    ||| ||| ||| || |  |  ||||  ||||| | ||||||||| | ||||||||||||||||| | ||||  |||||| |||||||||||||    
T  8308983 aagaatcaaggttatg--gtggaaa--tcaatggttcttagaaggtctttgaagacaatacaaaataaagaagattcatatcaagttccaagg 8308895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 144 - 308
Target Start/End: Complemental strand, 20461746 - 20461580
Alignment:
Q  144 ggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagt 241  Q
    |||||| |||||||||||||||||  |||||||| |||| | |||| || |||||| | | ||| ||||||||||| |||||   |||| ||||  ||||    
T  20461746 ggagttgtcaatggtttgaggaacaatttgtattgttttcattcgagtcgttgtaactcaatttcatcctaaatcacgcaacatgataggtgtttcgagt 20461647  T
Q  242 ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    ||||||| |||||||||||||| ||||  |||| |||| ||||   |||||||| |||||| |||||    
T  20461646 ctttttagtgagaaatcatgtaaatcggcaaaataagacatcaagtgaaggatcaaggatatgaaga 20461580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 21543129 - 21543071
Alignment:
Q  65 atggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaagg 123  Q
    ||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||    
T  21543129 atggaataacatatgatgtttttagctatgtttttagtgtaattattttcatttgaagg 21543071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 21545896 - 21545810
Alignment:
Q  146 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 232  Q
    |||| ||||||||||||||||| | ||||||| |||| | |||| || |||||| | |||||||||||||||||||||||| |||||    
T  21545896 agttgtcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaactcacttttatcctaaatcatgcaactacatag 21545810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 308
Target Start/End: Original strand, 7142115 - 7142281
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttg--agtc 242  Q
    ||||| |||||||||| |||||| | || ||||  ||| | |||| || |||||||| |||||||||| | ||||||||||||||||| ||||   |||     
T  7142115 gagttgtcaatggtttaaggaacatattttattgctttcactcgagtcgttgtaattcacttttatccaagatcatgcaactccataggtgttttaagtg 7142214  T
Q  243 tttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    |||| || |||||||||||||| ||||| ||| ||||| |||||  |||||||| | |||| |||||    
T  7142215 ttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatgaaga 7142281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 3487370 - 3487228
Alignment:
Q  236 ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga-cgaaaattcaatga-tcttagaagtt 333  Q
    |||||||||||||||||||||||||||  ||||  ||||||||| |||| | |||||||| | ||||  |||| |||| | |||| || ||| |||||      
T  3487370 ttgagtctttttaatgagaaatcatgtgaatcggcaaaacaagacatcaaatgaaggatcaatgatataaagatcgaaca-tcaacgactctcagaagac 3487272  T
Q  334 atttgaagacaatacaaagtgaagataattcatttcaagttccaag 379  Q
    |||| |||||||||||||||||||  ||||||||| ||||||||||    
T  3487271 attttaagacaatacaaagtgaag--aattcatttgaagttccaag 3487228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 5312875 - 5312758
Alignment:
Q  153 aatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaat 250  Q
    |||||| | ||||||| |||||||| |||| | | || || |||||||| ||||||||| || | ||||||||||||||| ||  ||||||||||||| |    
T  5312875 aatggtctaaggaactatttgtattgttttcatttgagtcgttgtaattcacttttatcttatagcatgcaactccataggtgttttgagtctttttagt 5312776  T
Q  251 gagaaatcatgtagatcg 268  Q
    || |||||||||| ||||    
T  5312775 gataaatcatgtaaatcg 5312758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 375
Target Start/End: Complemental strand, 20470911 - 20470674
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 239  Q
    |||||||| ||||||||||||||||| | || |||| |||| | |  | || |||||||| ||||| | ||||||||||||| || ||||| ||||  ||    
T  20470911 gaggagttgtcaatggtttgaggaacatattatattgttttcacttaagtcgttgtaattcactttcagcctaaatcatgcatctgcatagctgttttga 20470812  T
Q  240 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttattt 337  Q
    || |||| || ||| ||| |||||| ||||| ||| ||||| ||| || ||| |||| |||||  ||| |   || ||||||| | |||||||| |  ||    
T  20470811 gtgttttatagtgataaagcatgtaaatcgacaaatcaagacatcgcatgaacgatcaaggatgtgaatattgaagttcaatggttcttagaaggttctt 20470712  T
Q  338 gaagacaatacaaagtgaagataattcatttcaagttc 375  Q
    |||||||||||||| |||||| |||| |||||||||||    
T  20470711 gaagacaatacaaaatgaagaaaattgatttcaagttc 20470674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 20017151 - 20017204
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  20017151 tcttagaaggttcttgaagacaatacaaagtgaagaaaattcatttcaagttcc 20017204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 375
Target Start/End: Original strand, 7815534 - 7815573
Alignment:
Q  336 ttgaagacaatacaaagtgaagataattcatttcaagttc 375  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  7815534 ttgaagacaatacaaagtgaagaaaattcatttcaagttc 7815573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 323 - 374
Target Start/End: Complemental strand, 21545743 - 21545692
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagtt 374  Q
    ||||||||  ||||||||||||||| |||||||||| |||||||||||||||    
T  21545743 tcttagaaagtatttgaagacaataaaaagtgaagaaaattcatttcaagtt 21545692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 22067719 - 22067666
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  ||||||||||||||||||||| | |||||||||||||||||    
T  22067719 tcttagaaggttgttgaagacaatacaaagtgaaaagaattcatttcaagttcc 22067666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 315384 - 315424
Alignment:
Q  336 ttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  315384 ttgaagacaatacaaagtgaataaaattcatttcaagttcc 315424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 12358810 - 12358719
Alignment:
Q  194 ttgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatc 283  Q
    |||||||| | |||||||||||||||| ||||| ||||| ||  ||||||||||||| |||||||| || || |||| |||| ||| |||||    
T  12358810 ttgtaattcatttttatcctaaatcattcaacttcataggtgttttgagtctttttagtgagaaataatataaatcggaaaagcaaaatatc 12358719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 315199 - 315294
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    |||||||| |||||||||||| |||  | ||||||| || | | |||| | ||||| ||| | |||||||||| ||||||||||||||||| ||||    
T  315199 gaggagttgtcaatggtttgaagaatatattgtattattgtcactcgagttattgttattcagttttatcctagatcatgcaactccataggtgtt 315294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 308
Target Start/End: Complemental strand, 9761464 - 9761347
Alignment:
Q  194 ttgtaatttacttttatcctaaatcatgcaactccatagttgttgagtctttttaa---tgagaaatcatgtagatcgaaaaaacaagatatcacacgaa 290  Q
    |||||||| |||||||||||| || |||||| ||||||| ||||  |  |||||||   ||| |||||||||| ||||| ||| ||||| |||||  |||    
T  9761464 ttgtaattcacttttatcctagattatgcaattccataggtgttttgagtttttaatagtgataaatcatgtaaatcgacaaatcaagacatcacgtgaa 9761365  T
Q  291 ggatcgaggataagaaga 308  Q
    ||||| |||||| |||||    
T  9761364 ggatcaaggatatgaaga 9761347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 46054713 - 46054801
Alignment:
Q  143 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 231  Q
    ||||||| ||| || ||||||||||  ||| |||| |||| | || | || |||||||||||||||||  |||||||||||||| ||||    
T  46054713 aggagttgtcattgatttgaggaacaatttatattgttttaattcaagtcgttgtaatttacttttataataaatcatgcaacttcata 46054801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 9e-53; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 60 - 459
Target Start/End: Original strand, 30543695 - 30544095
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 159  Q
    ||||||||||| ||| |||||||||||||||| | |||||||| |  || |||||||||||||  ||||| |||||  ||| |||||||| |||||| ||    
T  30543695 tgatgatggaaaaacttatgatatttttagctatgtttttagtatttttttttgcatttgaagacaaattaaaagttaattagaggagttctcaatg-tt 30543793  T
Q  160 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaat 257  Q
    ||| |||||||| ||||| |||| | | || |  |||||||| |||||||||||||||||||||| |  |||| ||||  ||||||||||  ||||||||    
T  30543794 tgatgaactttt-gtattgttttcatttgagttgttgtaattcacttttatcctaaatcatgcaattatataggtgttttgagtctttttggtgagaaat 30543892  T
Q  258 catgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat--cttagaagttatttgaagacaatacaaagtga 355  Q
    |||||| ||||  |||||||||||||||| ||||||| ||||||| |||||   || ||||||| |   ||| ||| ||||| ||||||||| |||||||    
T  30543893 catgtaaatcggtaaaacaagatatcacatgaaggattgaggatatgaagattgaagttcaatggttctttaaaagatatttaaagacaatataaagtga 30543992  T
Q  356 agataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggtcgtaagctgctaaaatcgcacatgaggggagtgcctcatgag 455  Q
    ||| ||||||||||||||||||||| |||  |||  | |||||||   |||||||||||| || ||||| ||||||  |||||||||  ||||||||| |    
T  30543993 agaaaattcatttcaagttccaaggcattgcaaggcggaagaatgagtgaaaaagggtcgaaaactgctgaaatcgtgcatgagggg-ttgcctcatgtg 30544091  T
Q  456 cccc 459  Q
    ||||    
T  30544092 cccc 30544095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 59 - 378
Target Start/End: Original strand, 11437350 - 11437673
Alignment:
Q  59 ttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggt 158  Q
    |||||| ||||||||||| |||| |||||| || |  |||||||    || |||| |||| |||| |||||| ||||| ||| |||||||||||||||||    
T  11437350 ttgatgttggaataacatttgatgtttttacctatgcttttagttattttctttgtatttaaaggcaaattggaagtcaattagaggagttttcaatggt 11437449  T
Q  159 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata-gt-tgttgagtctttttaatgagaaa 256  Q
    | || ||| ||||||| || |||| | |||| || || ||||| | ||| ||| ||  ||||||||||||||| || | ||||||||||||| |||||||    
T  11437450 tcgaagaaatttttgtgttgttttcattcgagtcgttataattcagtttcatcataggtcatgcaactccatatgtattttgagtctttttagtgagaaa 11437549  T
Q  257 tcatgtagatcgaaaaaacaagatatcacacg-aaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtg 354  Q
    ||||||| ||||  ||||||||| ||||   | ||||||| |||||| ||| |   || |||||| | |||||||||  |||||||||||||||| ||||    
T  11437550 tcatgtaaatcggcaaaacaagacatcaagtgaaaggatcaaggatatgaaaattgaagttcaatggttcttagaagacatttgaagacaatacagagtg 11437649  T
Q  355 aagataattcatttcaagttccaa 378  Q
    |||||||||||||| |||||||||    
T  11437650 aagataattcatttgaagttccaa 11437673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 142 - 378
Target Start/End: Original strand, 29291785 - 29292023
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata-gt-tgttga 239  Q
    |||||||| |||||||||||||||| ||||| |||| |||| | | || || |||||||  | ||||||||||||||||||||||  ||| || | ||||    
T  29291785 gaggagttatcaatggtttgaggaattttttatatt-ttttcatttgagtcgttgtaatgcagttttatcctaaatcatgcaactttataagtattttga 29291883  T
Q  240 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttg 338  Q
    ||||||||| | |||||||||||| ||||  |||||||||||||||  |||| |||||||||| ||| |   ||  ||||| | ||||||||| | ||||    
T  29291884 gtctttttagtaagaaatcatgtaaatcggcaaaacaagatatcacgtgaagaatcgaggatatgaatattgaagatcaatggttcttagaaggtctttg 29291983  T
Q  339 aagacaatacaaagtgaagataattcatttcaagttccaa 378  Q
    ||||||| | |||||||| | |||||||||||| ||||||    
T  29291984 aagacaacagaaagtgaaaaaaattcatttcaaattccaa 29292023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 115 - 356
Target Start/End: Complemental strand, 13583637 - 13583403
Alignment:
Q  115 atttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatccta 214  Q
    |||| |||| |||||  ||||| ||| |||||||| | ||| || |||||||| |||| |||| |||||| |||| || |||||||| | ||||||||||    
T  13583637 attttaaggtaaattagaagtcaattagaggagttgttaatagtctgaggaaccttttctattgtttttattcgagtctttgtaattcagttttatccta 13583538  T
Q  215 aatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaa 312  Q
    ||||||          |||||  ||||||||||||| |||||||||||||| ||||| ||||||||| ||||   ||||||||||||||| || ||   |    
T  13583537 aatcat----------agttggtttgagtctttttagtgagaaatcatgtaaatcgacaaaacaagacatcaagtgaaggatcgaggatatgatgattga 13583448  T
Q  313 aattcaat-gatcttagaagttatttgaagacaatacaaagtgaa 356  Q
    | |||||| | ||||||||| ||||||||||||||||||||||||    
T  13583447 agttcaatggttcttagaagatatttgaagacaatacaaagtgaa 13583403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 95 - 232
Target Start/End: Complemental strand, 24584872 - 24584735
Alignment:
Q  95 tttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcat 194  Q
    |||||||| ||||| |||| ||||||||| |||||  ||||| ||| |||||||| |||  ||||||||||| |||||||||| |||| | |||| ||||    
T  24584872 tttttagtataattctttgtatttgaaggcaaattagaagtcaattagaggagttgtcatcggtttgaggaattttttgtattgttttcattcgagtcat 24584773  T
Q  195 tgtaatttacttttatcctaaatcatgcaactccatag 232  Q
    ||||||| | ||||||| ||||||||||||||| ||||    
T  24584772 tgtaattcatttttatcataaatcatgcaactctatag 24584735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 14977208 - 14977118
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaa-tcgattcattgtaatttacttttatcctaaatcatgcaactccata 231  Q
    |||||||| ||||||||||||||||| | ||||||| ||||| | |||| ||||||||||| |||||||||||||||||||||||||||||    
T  14977208 gaggagttgtcaatggtttgaggaacatattgtattgtttttcactcgagtcattgtaattcacttttatcctaaatcatgcaactccata 14977118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 151 - 368
Target Start/End: Complemental strand, 14424904 - 14424684
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttga--gtcttttta 248  Q
    |||||||||||||||||||||| |||  |||| | |||| || |||||||| | |||||||||||||||||||||||||||| ||||    || ||||||    
T  14424904 tcaatggtttgaggaactttttatatggttttcattcgagtcgttgtaattcagttttatcctaaatcatgcaactccataggtgttttaggttttttta 14424805  T
Q  249 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaata 347  Q
     |||||||||||||| ||||  ||||||||| | ||   |||||||  | ||||||||||   ||  ||||| | ||||||||| | |||||| |||||     
T  14424804 gtgagaaatcatgtaaatcggcaaaacaagacaacaagggaaggatatatgataagaagattgaagatcaatggttcttagaaggtttttgaacacaatt 14424705  T
Q  348 caaagtgaagataattcattt 368  Q
    ||| ||||||| |||||||||    
T  14424704 caatgtgaagaaaattcattt 14424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 142 - 376
Target Start/End: Complemental strand, 16052378 - 16052140
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 239  Q
    |||||||| ||||||||||||  ||| | || || | |||| | |||| || || ||||| || |||| | ||||||||||||||| |||| ||||  ||    
T  16052378 gaggagttgtcaatggtttgaataacatattttaatgttttcactcgagtcgttataattcacatttaccttaaatcatgcaactcaataggtgttttga 16052279  T
Q  240 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttattt 337  Q
    || |||| || ||||||||||| || ||| | ||| ||||| |||||| |||||||  |||||| |||||  |||   ||||||| |||||||| | |||    
T  16052278 gtgttttgtagtgagaaatcatctaaatcaacaaatcaagacatcacatgaaggataaaggatatgaagattaaagaccaatgattcttagaaggttttt 16052179  T
Q  338 gaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  16052178 gaagacaatacaaaatgaagaaaattcatttcaagttcc 16052140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 146 - 380
Target Start/End: Complemental strand, 22894627 - 22894391
Alignment:
Q  146 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag--ttgttgagtct 243  Q
    |||| |||||||||||||| || | |||||||||||  | |||| ||||||| ||| ||||||||| || ||||| |||||||||||   | || ||| |    
T  22894627 agttgtcaatggtttgaggtacatattgtattctttacactcgaatcattgtgattcacttttatcttagatcattcaactccataggtatttttagtgt 22894528  T
Q  244 t-tttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaa-tgatcttagaagttatttgaag 341  Q
    | | || |||||||||||||| |||| |||| |||||||||||| |||||||| | ||||  ||||    ||||||| || ||||||| | | |||||||    
T  22894527 tctatagtgagaaatcatgtaaatcg-aaaatcaagatatcacatgaaggatcaatgatataaaga-ttgaattcaattgttcttagatggtttttgaag 22894430  T
Q  342 acaatacaaagtgaagataattcatttcaagttccaagg 380  Q
    ||||||||||||||||| ||||| ||| |||||||||||    
T  22894429 acaatacaaagtgaagaaaattcttttgaagttccaagg 22894391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 142 - 380
Target Start/End: Original strand, 32239301 - 32239543
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 239  Q
    |||||||| ||||||||||||| ||| | ||||||| |||||| | || || ||| |||| ||||||||| |||||||||||||||||||  ||  ||||    
T  32239301 gaggagttgtcaatggtttgagtaacatattgtattgtttttacttgagtcgttgcaattcacttttatcttaaatcatgcaactccataaatgttttga 32239400  T
Q  240 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttattt 337  Q
    || |||| || ||||||||| |||| || || ||| | ||| |||||| |||||||  |||||| |||||   || |||||| | | ||| ||| |  ||    
T  32239401 gtgttttgtagtgagaaatcgtgtaaattgacaaatcgagacatcacatgaaggataaaggatatgaagattgaagttcaatggtttttataaggttctt 32239500  T
Q  338 gaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
     ||||||||| |||||||||| ||||||||||||||| |||||    
T  32239501 aaagacaataaaaagtgaagaaaattcatttcaagtttcaagg 32239543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 170 - 412
Target Start/End: Original strand, 5153800 - 5154045
Alignment:
Q  170 tttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatc 267  Q
    |||||||| |||| | |||| ||||||||||| | ||||||| |||||||| |||||| |||| ||  ||||||||||||| | |||||||||||| ||     
T  5153800 tttgtattattttcattcgagtcattgtaattcagttttatcttaaatcattcaactcgataggtgttttgagtctttttagtaagaaatcatgtaaata 5153899  T
Q  268 gaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatga-tcttagaagttatttgaagacaatacaaagtgaagataattcat 366  Q
    |  ||||||||| || |   ||||||||||||||| |||||   ||  ||||||| | || |||| | ||||||||||||| ||  |||| | |||||||    
T  5153900 ggcaaaacaagacataaagtgaaggatcgaggatatgaagattgaagatcaatgattattggaaggtttttgaagacaatataacatgaataaaattcat 5153999  T
Q  367 ttcaagttccaagggattaaaagatgaaagaatggccgaaaaaggg 412  Q
    |||||||||||||  |||  |||| | |||||||  ||||||||||    
T  5154000 ttcaagttccaagacattgcaagacggaagaatgctcgaaaaaggg 5154045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 376
Target Start/End: Original strand, 12956503 - 12956733
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagt 241  Q
    |||||||| ||||||||||||||||  | ||||||| |||| | |||| |||| |||||| ||||||||||||||||||| ||||| |||| |||         
T  12956503 gaggagttgtcaatggtttgaggaaaatattgtattgttttcactcgagtcatcgtaattcacttttatcctaaatcatgtaactctataggtgt----- 12956597  T
Q  242 ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagac-gaaaattcaatgatcttagaagttatttgaa 340  Q
     ||| || |||  |||||| || ||||| ||| |||||||||||| |||| ||| |||||| |||||| ||| ||  | || | || |||| | ||| ||    
T  12956598 -tttgtagtgaagaatcatataaatcgataaaccaagatatcacatgaagaatcaaggatatgaagactgaagatcaattgtttttggaaggttttttaa 12956696  T
Q  341 gacaatacaaagtgaaga-taattcatttcaagttcc 376  Q
    || |||||||||||||||  |||||||||||||||||    
T  12956697 gataatacaaagtgaagagaaattcatttcaagttcc 12956733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 308
Target Start/End: Original strand, 28074583 - 28074695
Alignment:
Q  198 aatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatc 295  Q
    |||| |||||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||||||| ||    ||||||||| |||| | ||||||||    
T  28074583 aattcacttttatcctaaatcatgcaactccataggtgtttcgagtctttttagtgagaaatcatgtaaatatgcaaaacaagacatcaaatgaaggatc 28074682  T
Q  296 gaggataagaaga 308  Q
     |||||| |||||    
T  28074683 aaggatatgaaga 28074695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 143 - 285
Target Start/End: Complemental strand, 35135522 - 35135376
Alignment:
Q  143 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgag 240  Q
    ||||||| |||| ||||| ||| || ||||||||| |||||| |||| ||||||||||| | ||||||||||||||||||||||||| |  ||  |||||    
T  35135522 aggagttgtcaaaggttttaggtacattttgtattgtttttactcgagtcattgtaattcatttttatcctaaatcatgcaactccacatgtgttttgag 35135423  T
Q  241 tctttttaat--gagaaatcatgtagatcgaaaaaacaagatatcac 285  Q
    |||||||  |  ||||||||| ||| ||||| ||||||||| |||||    
T  35135422 tctttttttttggagaaatcaggtaaatcgacaaaacaagacatcac 35135376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 146 - 298
Target Start/End: Original strand, 10867006 - 10867160
Alignment:
Q  146 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtct 243  Q
    |||| ||||||||||||||||  ||||||||| |||| | | || || |||||||| | |||||||  |||||||||||||||| || ||  |||| |||    
T  10867006 agttgtcaatggtttgaggaatattttgtattgttttcatttgagtcgttgtaattcagttttatctcaaatcatgcaactccaaaggtgctttgaatct 10867105  T
Q  244 ttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgag 298  Q
    ||||| ||||||||||||||  |||  ||||||||||| |||  |||||||||||    
T  10867106 ttttagtgagaaatcatgtaagtcggcaaaacaagataccacgtgaaggatcgag 10867160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 59 - 279
Target Start/End: Original strand, 31436410 - 31436632
Alignment:
Q  59 ttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggt 158  Q
    ||||||||||| || |||||||||||||   || ||||||||||    |||| |||||||||||| ||||   | ||   || |||||||| |||||| |    
T  31436410 ttgatgatggagtatcatatgatattttatactatatttttagttattttatctgcatttgaaggcaaataagatgtaatttagaggagttgtcaatgat 31436509  T
Q  159 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaa 256  Q
    ||||||||     | |||| |||| | |||| ||| ||||||||| |||||||||||||||||||||| ||||| ||  |||| |||||||| |||||||    
T  31436510 ttgaggaataaactatatttttttcattcgagtcagtgtaatttagttttatcctaaatcatgcaactacataggtgttttgaatctttttagtgagaaa 31436609  T
Q  257 tcatgtagatcgaaaaaacaaga 279  Q
    ||||||| ||| | |||||||||    
T  31436610 tcatgtaaatcaacaaaacaaga 31436632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 380
Target Start/End: Complemental strand, 27097902 - 27097661
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 239  Q
    ||||| || ||||||||||||||||| | ||| ||| |||| | | || || |||||||| | ||||||| |||||||||||||| ||||| ||||   |    
T  27097902 gaggaattgtcaatggtttgaggaacatgttgcattgttttcatttgagtcgttgtaattcagttttatcataaatcatgcaacttcataggtgtttaaa 27097803  T
Q  240 gtc--tttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatt 336  Q
    |||  |||||| |||||||||||||| ||||  ||||||||| |||||  || |||| ||  ||| |||||   ||  | ||| | ||||||||| | ||    
T  27097802 gtctttttttagtgagaaatcatgtaaatcggcaaaacaagacatcacgtgatggattgatcatatgaagattgaa--tgaatagttcttagaaggtctt 27097705  T
Q  337 tgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
    ||||||||||||||  |||||| |||||| ||||||||||||||    
T  27097704 tgaagacaatacaagttgaagaaaattcaattcaagttccaagg 27097661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 285
Target Start/End: Complemental strand, 28260381 - 28260245
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtcttttta 248  Q
    ||||||||| | ||||| ||||||||| |||| | |  | || ||||||||||  ||||||||||||||||  ||||||||| ||||  |||||||||||    
T  28260381 tcaatggttggtggaacattttgtattattttcattttagtcgttgtaatttaggtttatcctaaatcatgagactccataggtgttttgagtcttttta 28260282  T
Q  249 atgagaaatcatgtagatcgaaaaaacaagatatcac 285  Q
     |||||||||||||| |||   ||||||||| |||||    
T  28260281 gtgagaaatcatgtaaatcagcaaaacaagacatcac 28260245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 379
Target Start/End: Complemental strand, 28292200 - 28291961
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 239  Q
    |||||||| ||| ||||||||||||| |||| | ||||||| | | || |  || ||||| | ||||||||||| | |||||||| || |  ||||  |     
T  28292200 gaggagttgtcagtggtttgaggaacattttatgttcttttcatttgagttgttataattcagttttatcctaatttatgcaacttcacaagtgttttgt 28292101  T
Q  240 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagac-gaaaattcaatgatcttagaagttatttg 338  Q
    || |||||| |||||| ||||||| ||||  |||| |||| |||||| ||||||| ||||||| |||||  ||| ||| |  | ||||||||| | ||||    
T  28292100 gtttttttagtgagaa-tcatgtaaatcgccaaaataagacatcacatgaaggattgaggatatgaagattgaagattaatggttcttagaaggtctttg 28292002  T
Q  339 aagacaatacaaagtgaagataattcatttcaagttccaag 379  Q
    ||||||||||||| |||||| |||  |||||||||||||||    
T  28292001 aagacaatacaaaatgaagaaaataaatttcaagttccaag 28291961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 145 - 277
Target Start/End: Complemental strand, 6888287 - 6888156
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtctt 244  Q
    ||||| ||||||||| ||| ||| ||||||||| |||| | | || ||||||||||| | || ||||||||||||||||||||||    | ||||||| |    
T  6888287 gagttgtcaatggttagagaaacattttgtatt-ttttcatttgagtcattgtaattcagttctatcctaaatcatgcaactccaggtgttttgagtcat 6888189  T
Q  245 tttaatgagaaatcatgtagatcgaaaaaacaa 277  Q
    |||| |||||||||||||| ||| | |||||||    
T  6888188 tttagtgagaaatcatgtaaatcaacaaaacaa 6888156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 372
Target Start/End: Complemental strand, 28901441 - 28901217
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagt 241  Q
    |||||||| ||||||||||||||||| | ||||||| |||| | |||| || ||||||||   |||||||||| || |||||||||| ||| |||         
T  28901441 gaggagttgtcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaattcgtttttatcctagataatgcaactccttagatgt----- 28901347  T
Q  242 ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaa 340  Q
     ||| || ||| |||| ||||| ||||| ||| ||||| |||| | |||| ||| | |||| |||||    |||||||| | ||||| ||| | | ||||    
T  28901346 -tttgtagtgataaataatgtacatcgacaaatcaagacatcatatgaagaatcaatgatatgaaga-ttgaattcaatggttcttataaggtttctgaa 28901249  T
Q  341 gacaatacaaagtgaagataattcatttcaag 372  Q
    |||||||||||||||||| |||||||||||||    
T  28901248 gacaatacaaagtgaagaaaattcatttcaag 28901217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 278
Target Start/End: Complemental strand, 12774935 - 12774805
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagt-cttttt 247  Q
    |||||||||||| | || |||| |||| |||||| | || ||||||||||||| ||||||||||||||||||||  |||||| ||  || ||| ||||||    
T  12774935 tcaatggtttgacgtacattttatattatttttatttgagtcattgtaatttagttttatcctaaatcatgcaataccataggtgtttttagtacttttt 12774836  T
Q  248 aatgagaaatcatgtagatcgaaaaaacaag 278  Q
    | | |||||| ||||| |||| |||||||||    
T  12774835 agtaagaaataatgtaaatcggaaaaacaag 12774805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 30851282 - 30851105
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 159  Q
    |||||||||||   |||||||||||||| ||| | ||||||||    || |||  |||||||||||||||  |||||  ||  | ||||| |  ||||||    
T  30851282 tgatgatggaacgtcatatgatatttttggctatgtttttagttattttctttatatttgaaggaaaattagaagtcatttataagagttgttgatggtt 30851183  T
Q  160 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    ||||||| ||||| |||| |||| | |||| || |||||||| |  |||||||||||||||||||||| |||| ||||    
T  30851182 tgaggaagtttttatattattttcattcgaatcgttgtaattcagatttatcctaaatcatgcaactcaataggtgtt 30851105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 12357696 - 12357754
Alignment:
Q  342 acaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatg 400  Q
    |||||| |||||||||| |||||||||||| |||||||| |||| |||| |||||||||    
T  12357696 acaataaaaagtgaagaaaattcatttcaaattccaaggcattataagaggaaagaatg 12357754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Original strand, 12358824 - 12358882
Alignment:
Q  342 acaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatg 400  Q
    |||||| |||||||||| |||||||||||| |||||||| |||| |||| |||||||||    
T  12358824 acaataaaaagtgaagaaaattcatttcaaattccaaggcattataagaggaaagaatg 12358882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 16054492 - 16054545
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  ||||||| ||||||||||||||| |||||||||||||||||    
T  16054492 tcttagaaggttgttgaagaaaatacaaagtgaagaaaattcatttcaagttcc 16054545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 5570241 - 5570158
Alignment:
Q  143 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaact 226  Q
    ||||||| |||||  |||||||||| | ||||||| |||| | |||| |  |||||||| |||||||||||| |||||||||||    
T  5570241 aggagttgtcaatactttgaggaacatattgtattgttttcactcgagttgttgtaattcacttttatcctatatcatgcaact 5570158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 374
Target Start/End: Complemental strand, 13081851 - 13081800
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagtt 374  Q
    ||||||||| |  |||||||||||||||| |||||| |||||||||||||||    
T  13081851 tcttagaaggttgttgaagacaatacaaaatgaagaaaattcatttcaagtt 13081800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Original strand, 31436678 - 31436724
Alignment:
Q  333 tatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||    
T  31436678 tatttgaagacaatacaaagtgaaaaaaatt-atttcaagttccaagg 31436724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 11310172 - 11310120
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| | |||||| ||||||||||||||||| |||| ||||||||||||    
T  11310172 tcttagaaggtttttgaaaacaatacaaagtgaagaaaatt-atttcaagttcc 11310120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 230
Target Start/End: Original strand, 24120245 - 24120334
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcga-ttcattgtaatttacttttatcctaaatcatgcaactccat 230  Q
    |||||||| |||| |||||||||||  | ||||||| ||||| | | | ||| ||||| || ||||||||||||||| ||||||||||||    
T  24120245 gaggagttgtcaacggtttgaggaatatattgtattttttttcacccaattcgttgtagttaacttttatcctaaataatgcaactccat 24120334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 28902103 - 28902192
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 231  Q
    |||||||| | ||||||||||| ||| | ||||||| |||| | |||| || |||||||| |||||||||||| | || |||| ||||||    
T  28902103 gaggagttattaatggtttgagaaacatattgtattgttttcattcgagtcgttgtaattcacttttatcctataccacgcaaatccata 28902192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 28902287 - 28902340
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  ||||||||||||||||||||| | ||||||||| |||||||    
T  28902287 tcttagaaggttattgaagacaatacaaagtgaataaaattcattttaagttcc 28902340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 30851004 - 30850960
Alignment:
Q  335 tttgaagacaatacaaagtgaagataattcatttcaagttccaag 379  Q
    |||||| | ||||||||||||||| |||| |||||||||||||||    
T  30851004 tttgaatataatacaaagtgaagaaaattaatttcaagttccaag 30850960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 1e-51; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 59 - 358
Target Start/End: Original strand, 28422384 - 28422685
Alignment:
Q  59 ttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggt 158  Q
    |||||||| ||||||||||| || |||||  || |  ||||||||||||| ||||||||||||||||||||  ||||| ||| |||||||| ||  | ||    
T  28422384 ttgatgatagaataacatattatgttttttactatgcttttagtgtaattctttgcatttgaaggaaaattagaagtcaattagaggagttgtcgtttgt 28422483  T
Q  159 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-taatgagaa 255  Q
    |||||||| |||||||||| |||| | |||| ||||||||||| |||||||| |||||||||||||||| || | ||  |||| | |||| || ||||||    
T  28422484 ttgaggaattttttgtattgttttcattcgaatcattgtaattcacttttat-ctaaatcatgcaactcaattggtgttttgaatgttttgtagtgagaa 28422582  T
Q  256 atcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtga 355  Q
    |||||||||||||| ||| ||| | |||||  ||||||| ||||||| |||||   || ||||||||| ||||||| |||||||||||||||||||||||    
T  28422583 atcatgtagatcgacaaatcaatacatcacgtgaaggattgaggatatgaagattgaagttcaatgatgttagaaggtatttgaagacaatacaaagtga 28422682  T
Q  356 aga 358  Q
    |||    
T  28422683 aga 28422685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 132 - 413
Target Start/End: Original strand, 18474175 - 18474458
Alignment:
Q  132 aagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 231  Q
    ||||| ||| ||||| || ||||| ||||||||||||  ||||||| |||  | |||||||||||||||| ||| |||||||||||||||||||||||||    
T  18474175 aagtcaattagaggatttatcaatcgtttgaggaactgattgtattgtttc-attcgattcattgtaattcactgttatcctaaatcatgcaactccata 18474273  T
Q  232 gttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttag 328  Q
    | ||  ||||||||||| | |||||||||||||| ||||  || |||||| || ||| |||||||||| |||   ||||   || ||||||| | |||||    
T  18474274 ggtgttttgagtcttttcagtgagaaatcatgtaaatcgggaacacaagacattacatgaaggatcgaagatgtaaagattgaatttcaatggtacttag 18474373  T
Q  329 aagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggt 413  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||| | |||  |||| ||||||| |  |||||||||||    
T  18474374 aaggtatttgaagacaatacaaagtgaagaaaattcatttcaagttccaatgcattgcaagacgaaagaacgagcgaaaaagggt 18474458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 110 - 356
Target Start/End: Original strand, 11474828 - 11475078
Alignment:
Q  110 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 209  Q
    |||||| || ||||||||||| |||||  ||  |||| |  ||||||||||||||||||||||||||| |||| | |||| || |||||||| | |||||    
T  11474828 tttgcacttaaaggaaaattggaagtcgtttaaaggactagtcaatggtttgaggaactttttgtattattttcattcgactcgttgtaattcaatttta 11474927  T
Q  210 tcctaaatcatgcaactccatagttg--ttgagtc-tttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaa 306  Q
    ||||||||||||||||| ||||  ||  ||||||| |||||| |||||||||||||| ||||  ||||||||| |||||| |||||||||| |||| ||     
T  11474928 tcctaaatcatgcaacttcatatgtgttttgagtcttttttagtgagaaatcatgtaaatcggcaaaacaagacatcacatgaaggatcgaagatatgag 11475027  T
Q  307 gacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaa 356  Q
    ||   ||  | ||| | ||||||||| ||||||||||||||||||||||||    
T  11475028 gattcaagataaatggttcttagaagatatttgaagacaatacaaagtgaa 11475078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 142 - 308
Target Start/End: Original strand, 26297763 - 26297929
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagt 241  Q
    |||||||| | ||||||||||| |||||||| |||| |||| | |||| || |||||||| | |||||||||||||||||||||| ||||  ||||||||    
T  26297763 gaggagttgttaatggtttgagaaactttttatattgttttcattcgagtcgttgtaattcaattttatcctaaatcatgcaacttcatatgtgttgagt 26297862  T
Q  242 ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    || |||| ||| |||||||||| ||||  ||||||||| ||||   ||||||||||||||| |||||    
T  26297863 ctatttagtgataaatcatgtaaatcggcaaaacaagacatcaagtgaaggatcgaggatatgaaga 26297929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 110 - 263
Target Start/End: Complemental strand, 26387977 - 26387822
Alignment:
Q  110 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 209  Q
    |||||||||||||| |||||  ||||  ||| ||| |||| ||||||||||||| ||| |||||||||||||| | | |  || | |||||| | |||||    
T  26387977 tttgcatttgaaggcaaattagaagtaaattagagtagttgtcaatggtttgagaaacgttttgtattcttttcatttgtgtcgtagtaattaagtttta 26387878  T
Q  210 tcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgta 263  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  26387877 tcctaaatcatgcaactccatagatgttttgagtctttttaatgagaaatcatgta 26387822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 60 - 308
Target Start/End: Complemental strand, 21829315 - 21829065
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 159  Q
    ||||||||| ||| ||||||||||||||  || |||||||| |    ||||||||||||||||||||||   | |||  || |||||||| |||||||||    
T  21829315 tgatgatgggatatcatatgatatttttgactatatttttatttattttatttgcatttgaaggaaaataagaggtcatttagaggagttgtcaatggtt 21829216  T
Q  160 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccat---agttgttgagtctttttaatgagaaa 256  Q
    |||||||| ||||||||| |||| | | || || |||||||| | |||||||||||||||| ||||| |||   |||| ||| ||||| ||| |||||||    
T  21829215 tgaggaacattttgtattattttcatttgagtcgttgtaattcagttttatcctaaatcatacaacttcatatgagtt-ttgggtcttgttagtgagaaa 21829117  T
Q  257 tcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    || |||| ||||   |||||||| |||||| |||| ||| |||||| |||||    
T  21829116 tcttgtaaatcgtcgaaacaagacatcacatgaagtatcaaggatatgaaga 21829065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 144 - 379
Target Start/End: Complemental strand, 19219310 - 19219071
Alignment:
Q  144 ggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagt 241  Q
    |||||| ||||||||||||||| | | || ||||  ||| | | || || |||||||| |||||||||| |||||||||||| |||||  ||||  ||||    
T  19219310 ggagttgtcaatggtttgaggagcatattttattactttcactagagtcgttgtaattcacttttatccaaaatcatgcaacaccataaatgttttgagt 19219211  T
Q  242 ctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttga 339  Q
     |||| || |||| ||||||||| |||   ||| ||||| |||||| |||||||| |||||| |||||   ||  |||||| | |||||||| | |||||    
T  19219210 gttttgtagtgaggaatcatgtaaatcttcaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatggttcttagaaggtttttga 19219111  T
Q  340 agacaatacaaagtgaagataattcatttcaagttccaag 379  Q
    ||||||||||||||||| | |||||||||||| |||||||    
T  19219110 agacaatacaaagtgaataaaattcatttcaaattccaag 19219071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 323 - 413
Target Start/End: Complemental strand, 19543040 - 19542950
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggt 413  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||  |||| ||||||  |  |||||||||||    
T  19543040 tcttagaaggtatttgaagacaatacaaagtgaagaaaattcatttcaagttccaaggcattgcaagacgaaagatagagcgaaaaagggt 19542950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 308
Target Start/End: Complemental strand, 8402651 - 8402484
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 239  Q
    |||||||| |||||||||||||||||  |||||||| |||| | |||| || |||||||| | ||||||| |||||||||||||||||||| ||  ||||    
T  8402651 gaggagttgtcaatggtttgaggaacaatttgtattgttttcattcgagtcgttgtaattcatttttatcttaaatcatgcaactccataggtgttttga 8402552  T
Q  240 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    ||| |||||  ||| |||| |||| ||||| | | ||||| ||||   ||||||||||||||| |||||    
T  8402551 gtc-ttttagcgaggaatcgtgtaaatcgatagatcaagacatcaagtgaaggatcgaggatatgaaga 8402484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 151 - 308
Target Start/End: Complemental strand, 25919556 - 25919403
Alignment:
Q  151 tcaatggtttgaggaactttt--tgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtcttttta 248  Q
    ||||||||||||||||| | |  ||| || |||||| | || |||| |||||| |||||||||||||||||||||||||||||| |||      ||| ||    
T  25919556 tcaatggtttgaggaacatatattgtgttgtttttacttgagtcatcgtaattcacttttatcctaaatcatgcaactccatagatgt------tttgta 25919463  T
Q  249 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
     |||| ||||||||| ||||| ||| |||||||||||| |||||||| |||||| |||||    
T  25919462 gtgaggaatcatgtaaatcgacaaaccaagatatcacatgaaggatcaaggatatgaaga 25919403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 33577757 - 33577903
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 248  Q
    |||||||||||| |||| ||||||||| |||||| | |||||||||||||| | || ||||||||||||||||||  ||| | ||  |||||||||||||    
T  33577757 tcaatggtttgaagaacgttttgtattgtttttatttgattcattgtaattcatttatatcctaaatcatgcaacctcattggtggtttgagtcttttta 33577856  T
Q  249 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatc 295  Q
    | || ||| |||||| ||||  |||  |||| |||||| ||||||||    
T  33577857 aagaaaaaacatgtaaatcggcaaagtaagacatcacatgaaggatc 33577903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 19546075 - 19545967
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 248  Q
    ||||||||||||||||||| ||||||| |||||| | || ||||||||||| ||| |||||||| |||||| || |  |||||||  |||||| ||||||    
T  19546075 tcaatggtttgaggaacttattgtattgtttttatttgagtcattgtaattcactattatcctatatcatgtaattttatagttgttttgagttttttta 19545976  T
Q  249 atgagaaat 257  Q
    |||||||||    
T  19545975 atgagaaat 19545967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 256
Target Start/End: Complemental strand, 30493349 - 30493249
Alignment:
Q  158 tttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaa 255  Q
    |||||| ||||||||||||| |||| | |||| || ||||| |||| |||||||||||||||||||| ||||| | ||  ||||||||||||| ||||||    
T  30493349 tttgagaaactttttgtattgttttcattcgagtcgttgtagtttagttttatcctaaatcatgcaaatccatgggtgttttgagtctttttagtgagaa 30493250  T
Q  256 a 256  Q
    |    
T  30493249 a 30493249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 307
Target Start/End: Complemental strand, 33914662 - 33914500
Alignment:
Q  143 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtc 242  Q
    ||||||| |||| |||||||||||| | ||||||| |||||| |||| || |||||||| ||  |||||| |||||||||||||| || ||| ||||||     
T  33914662 aggagttgtcaacggtttgaggaacatattgtattgtttttactcgagtcgttgtaattcac-gttatcccaaatcatgcaactctat-gtt-ttgagtg 33914566  T
Q  243 tttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaag 307  Q
    |||| || |||||||||||||| |||||  || ||||| |||||  |||||||| |||||| ||||    
T  33914565 ttttgtagtgagaaatcatgtaaatcgacgaatcaagacatcacgtgaaggatcaaggatatgaag 33914500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 230
Target Start/End: Complemental strand, 1475381 - 1475293
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccat 230  Q
    |||||||||||||||||||||||||  | ||||||| |||| | |||| || |||||||| | || ||||||| |||||||||||||||    
T  1475381 gaggagttttcaatggtttgaggaatatattgtattattttcactcgagtcgttgtaattcaattatatcctagatcatgcaactccat 1475293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 26797285 - 26797205
Alignment:
Q  205 ttttatcctaaatcatgcaactccatagttgtt-gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatca 284  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||  |||| |||||||| ||||| ||||||||| ||||    
T  26797285 ttttatcctaaatcatgcaacttcataggtgtttgagtctttttagagagatatcatgtaaatcgacaaaacaagacatca 26797205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 11521154 - 11521248
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    |||||||| ||||||||||||||||| | ||||||| |||||| | ||||   ||||||| | |||||||||| ||||||||| ||||||||||||    
T  11521154 gaggagttgtcaatggtttgaggaacatattgtattatttttacttgatt-tgtgtaattcagttttatcctagatcatgcaagtccatagttgtt 11521248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 13911282 - 13911368
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 231  Q
    ||||| ||||||||||||||||| | | ||||| |||| | | || ||||||||||| |||||||||||| ||||||||||| ||||    
T  13911282 gagttgtcaatggtttgaggaacatatggtattgttttcacttgaatcattgtaattcacttttatcctagatcatgcaacttcata 13911368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 380
Target Start/End: Complemental strand, 23908354 - 23908130
Alignment:
Q  159 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaa 256  Q
    ||||||||| ||||||||| |||| | ||||||| ||||||||  ||||||||| |||| |||||| | ||||| ||  |||||||||| ||  ||||||    
T  23908354 ttgaggaacattttgtattgttttcattcgattcgttgtaattcccttttatccaaaataatgcaatttcataggtgctttgagtctttctagggagaaa 23908255  T
Q  257 tcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtga 355  Q
    ||||||| | ||  ||| ||||| ||| || |||||||| || ||| |||||   ||  ||||| | | ||||||  | ||||||||||||||||| ||     
T  23908254 tcatgtaaagcggcaaagcaagacatctcatgaaggatcaagaatatgaagatttaagatcaatggtttttagaaagtttttgaagacaatacaaattgg 23908155  T
Q  356 agataattcatttcaagttccaagg 380  Q
     || |||||||| ||| ||||||||    
T  23908154 ggaaaattcattccaaattccaagg 23908130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 25883301 - 25883354
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  25883301 tcttagaaggttgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 25883354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 27374543 - 27374468
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaact 226  Q
    |||||||||| ||||| |||||||||| |||| | |||| ||||| ||||  | ||||||||||||||||||||||    
T  27374543 tcaatggtttaaggaagtttttgtattgttttcattcgagtcattataatccagttttatcctaaatcatgcaact 27374468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 5632459 - 5632402
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
    ||||| ||| |||||||||| |||| ||| |||||| |||||||||||||||||||||    
T  5632459 tcttataaggtatttgaagataataaaaattgaagaaaattcatttcaagttccaagg 5632402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 162 - 286
Target Start/End: Complemental strand, 5632614 - 5632496
Alignment:
Q  162 aggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtctttttaatgagaaatcatg 261  Q
    ||||| ||||||| || |||| | | ||||| |||||||| ||||||||| | |||||||||||||||||| |||      ||| || ||||||||||||    
T  5632614 aggaagtttttgtgttgttttcatttgattcgttgtaattcacttttatcttgaatcatgcaactccataggtgt------tttgtagtgagaaatcatg 5632521  T
Q  262 tagatcgaaaaaacaagatatcaca 286  Q
    || ||||| ||| ||||| ||||||    
T  5632520 taaatcgacaaaccaagacatcaca 5632496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 25188815 - 25188860
Alignment:
Q  186 tcgattcattgtaatttacttttatcctaaatcatgcaactccata 231  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||    
T  25188815 tcgaatcattgtaattcacttttatcataaatcatgcaactccata 25188860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 23007163 - 23007071
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    ||||| |||||| |||||||||  | ||||||| ||||   |||| ||||| ||| | |||||||||||||||||| ||||||||||| ||||    
T  23007163 gagttgtcaatgatttgaggaatatattgtattgttttccctcgagtcattataaatcacttttatcctaaatcatacaactccatagatgtt 23007071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 26418830 - 26418902
Alignment:
Q  236 ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    |||| |||||||| |||||||||||||| |||| ||||| |||| ||| || |||||||| |||||| |||||    
T  26418830 ttgaatctttttagtgagaaatcatgtaaatcggaaaaataagacatcgcatgaaggatcaaggatatgaaga 26418902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 376
Target Start/End: Original strand, 18066001 - 18066048
Alignment:
Q  329 aagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||| |||||||| ||||||||||||||| |||||||||||| ||||    
T  18066001 aagttttttgaagaaaatacaaagtgaagaaaattcatttcaacttcc 18066048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 374
Target Start/End: Complemental strand, 19263804 - 19263769
Alignment:
Q  339 aagacaatacaaagtgaagataattcatttcaagtt 374  Q
    |||||||||||||||||||| |||||||||||||||    
T  19263804 aagacaatacaaagtgaagaaaattcatttcaagtt 19263769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 1475196 - 1475143
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  ||||||| ||||||||||||||| |||| ||||||||||||    
T  1475196 tcttagaaggttattgaagataatacaaagtgaagaaaatttatttcaagttcc 1475143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 5632673 - 5632628
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgta 105  Q
    |||||||| ||||||||||||| |||||| |||| |||||||||||    
T  5632673 tgatgatgaaataacatatgatgtttttaactttgtttttagtgta 5632628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 10341985 - 10342038
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| | |||||||||||||||||||||  | || ||||||||||||||    
T  10341985 tcttagaaggtttttgaagacaatacaaagtgagaaaaactcatttcaagttcc 10342038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 298
Target Start/End: Original strand, 19285084 - 19285271
Alignment:
Q  112 tgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatc 211  Q
    ||||||||| || |||||  |||||  || |||||||| ||||| || |||| || |||| ||||| |||| | |||| || |||||||| | |||| ||    
T  19285084 tgcatttgagggtaaattagaagtcatttagaggagttgtcaatagtatgagaaaatttt-gtattattttcattcgagtcgttgtaattcaattttgtc 19285182  T
Q  212 ctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgag 298  Q
    |||||||  |||||||| ||| ||||  |||||| |||  ||||| ||| |||| |||  ||||||||||||||| | | |||||||||    
T  19285183 ctaaatccagcaactccttaggtgtttcgagtctctttcgtgagatatcgtgtaaatcagaaaaacaagatatcaaatgtaggatcgag 19285271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 2729718 - 2729630
Alignment:
Q  143 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 231  Q
    ||||||| |||||||||  |||||| | || |||| |||| | |||| || |||||||| | |||||||||||| ||||||||| ||||    
T  2729718 aggagttgtcaatggttcaaggaacatattatattgttttcactcgagtccttgtaattcatttttatcctaaaccatgcaacttcata 2729630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 377
Target Start/End: Complemental strand, 8402457 - 8402413
Alignment:
Q  333 tatttgaagacaatacaaagtgaagataattcatttcaagttcca 377  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||    
T  8402457 tatttgaagaaaatataaagtgaagaacattcatttcaagttcca 8402413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 11521376 - 11521416
Alignment:
Q  336 ttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||| ||||||||| ||||| |||||||||||||||||    
T  11521376 ttgaagataatacaaagcgaagaaaattcatttcaagttcc 11521416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 304
Target Start/End: Original strand, 27415236 - 27415347
Alignment:
Q  196 gtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaagg 292  Q
    |||||| ||||||||| |||||||||||||| ||||| ||  |||||| |||| || | |||||||||||| || ||  || ||||| ||||||  ||||    
T  27415236 gtaattcacttttatcgtaaatcatgcaacttcataggtgttttgagtgttttgtagtaagaaatcatgtaaatagaccaatcaagacatcacataaagg 27415335  T
Q  293 atcgaggataag 304  Q
    ||| ||||||||    
T  27415336 atcaaggataag 27415347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 60 - 380
Target Start/End: Complemental strand, 52271426 - 52271104
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 159  Q
    |||||||||||||||||||||| |||||| || | |||||||||||||| ||||||||| |||| ||| |   | || ||  |||||||| ||| |||||    
T  52271426 tgatgatggaataacatatgatgtttttaactatgtttttagtgtaattctttgcatttaaaggcaaaataggattcaata-gaggagttgtcattggtt 52271328  T
Q  160 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaat 257  Q
    ||||||| ||| |||| | |||| | |  | || |||| ||| |||||  |||||||| |||||||||||||| ||||  ||||||||||| ||||||||    
T  52271327 tgaggaaatttgtgtacttttttcatttaagtcgttgtcattcactttattcctaaattatgcaactccatagatgttttgagtctttttagtgagaaat 52271228  T
Q  258 catgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttgaagacaatacaaagtgaa 356  Q
     ||||| ||||  ||||||| |   |||  ||||||||||||||| |||||   || ||||||| | |||||||| ||||||||||||||||||||||||    
T  52271227 tatgtaaatcggcaaaacaaaacgccacgtgaaggatcgaggatatgaagattgaagttcaatggtacttagaaggtatttgaagacaatacaaagtgaa 52271128  T
Q  357 gataattcatttcaagttccaagg 380  Q
    || |||||||||||| ||||||||    
T  52271127 gaaaattcatttcaaattccaagg 52271104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 75 - 398
Target Start/End: Complemental strand, 26854485 - 26854161
Alignment:
Q  75 atatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgt 174  Q
    ||||||| ||||||||| ||||||||||    |||||||||||| ||   ||| |  ||||| ||| ||| |||| | |||| |||||||||||||||||    
T  26854485 atatgatgtttttagctatatttttagttattttatttgcatttaaaaacaaaatataagtcaattagagaagttgttaatgttttgaggaactttttgt 26854386  T
Q  175 attctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaa 272  Q
    |||||||| | || | || |||||||| | ||||||||||| |||| ||||| ||||| ||  |||||||||||||  ||||||||||||| | ||  ||    
T  26854385 attcttttcattcaagtcgttgtaattcaattttatcctaattcatacaacttcatagatgttttgagtcttttta--gagaaatcatgtaaaccggcaa 26854288  T
Q  273 aacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaa 371  Q
    ||||||| || |   |||||||| | |||| |||||   || |||||| | ||||||||| |||||||||||||||||||||||||| ||||||||| ||    
T  26854287 aacaagacattaagtgaaggatcaatgatatgaagattgaagttcaatggttcttagaagatatttgaagacaatacaaagtgaagaaaattcatttgaa 26854188  T
Q  372 gttccaagggattaaaagatgaaagaa 398  Q
    ||||||||| |||  |||||| |||||    
T  26854187 gttccaaggcattgcaagatggaagaa 26854161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 151 - 380
Target Start/End: Complemental strand, 19257895 - 19257665
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 248  Q
    |||||| ||||||||||||| |||||| |||| | || | |||||||||||   |||||||||||||||||||| ||| ||| ||  |||||| ||||||    
T  19257895 tcaatgatttgaggaactttctgtattgttttcattctagtcattgtaattcgattttatcctaaatcatgcaagtccttaggtgttttgagtattttta 19257796  T
Q  249 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatac 348  Q
     ||||||||| |||| || |  | ||||||| |||||| ||| ||||||||||| |||||   ||  |||| | ||||||||| | ||||||||||||||    
T  19257795 gtgagaaatcgtgtaaattggcataacaagacatcacatgaaagatcgaggatatgaagattgaacatcaa-gttcttagaaggtctttgaagacaatac 19257697  T
Q  349 aaagtgaagataattcatttcaagttccaagg 380  Q
    |||||||||| |||| ||||||| ||||||||    
T  19257696 aaagtgaagaaaatttatttcaatttccaagg 19257665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 145 - 379
Target Start/End: Complemental strand, 15298967 - 15298731
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtc 242  Q
    ||||| |||||||||||||||| |||||||||| | || | | || ||||||||||| | |||||||| ||||||||||||| ||||| ||  ||| |||    
T  15298967 gagttgtcaatggtttgaggaagtttttgtattgtattcatttgaatcattgtaattaagttttatccaaaatcatgcaacttcataggtgttttgtgtc 15298868  T
Q  243 tttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaag 341  Q
    | |||| ||| |||||||||| ||||  ||||||||| ||||    |||||||||||||| |||||   ||  ||||| | ||||| |||||||||||||    
T  15298867 tatttagtgataaatcatgtaaatcggcaaaacaagaaatcatgtaaaggatcgaggatatgaagattcaagatcaatggttcttaaaagttatttgaag 15298768  T
Q  342 acaatacaaagtgaagataattcatttcaagttccaag 379  Q
     |||||||| ||||| | ||||||||||||||||||||    
T  15298767 -caatacaatgtgaataaaattcatttcaagttccaag 15298731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 110 - 380
Target Start/End: Original strand, 25126462 - 25126735
Alignment:
Q  110 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 209  Q
    |||||||||||||| ||| |  |||||  || |||||||| ||||||||||||| || |||||||||| |||||| | || || | |||||| | |||||    
T  25126462 tttgcatttgaaggcaaaatagaagtcatttggaggagttgtcaatggtttgagaaattttttgtattgtttttatttgagtcgtggtaattcagtttta 25126561  T
Q  210 tcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaag 307  Q
    ||||||||||||  | |  |||  ||||  |||||||||||||||||||||||||| ||   ||||| |||| |||||  ||||||| ||||||| || |    
T  25126562 tcctaaatcatgtgattatatatgtgttttgagtctttttaatgagaaatcatgtaaattagaaaaataagacatcacgtgaaggattgaggatatgacg 25126661  T
Q  308 acgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
    || | |  ||||| | ||||||||  | |||||| |||||||||| |||||| |||||||||||||||||||||    
T  25126662 actacagatcaatagttcttagaaaatctttgaatacaatacaaaatgaagaaaattcatttcaagttccaagg 25126735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 151 - 380
Target Start/End: Original strand, 26102080 - 26102312
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 248  Q
    ||||||||||||||| | ||||||||| |||| | |||| |  |||||||| |||||||||||||||||||||||||||| | ||  |||||||||||||    
T  26102080 tcaatggtttgaggaccattttgtattgttttcattcgagttgttgtaattcacttttatcctaaatcatgcaactccatgggtgttttgagtcttttta 26102179  T
Q  249 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatga-tcttagaagttatttgaagacaata 347  Q
     ||||| ||| || | ||||| ||||||||| |||||  ||| |||| |||||| |||||   ||  ||||||| | ||||||| | |||||||||||||    
T  26102180 gtgagatatcgtgcaaatcgacaaaacaagacatcacgtgaatgatcaaggatatgaagaatgaagatcaatgatttttagaaggtttttgaagacaata 26102279  T
Q  348 caaagtgaagataattcatttcaagttccaagg 380  Q
    |||  ||| || ||||||| ||||||| |||||    
T  26102280 caagttgaggaaaattcatctcaagtttcaagg 26102312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 151 - 376
Target Start/End: Complemental strand, 11770086 - 11769857
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgt--tgagtcttttta 248  Q
    |||||||||| |||||| | ||||||| |||| | |||  || |||||||| ||||||||||||||||||| |||| ||| | |||  ||||| ||||      
T  11770086 tcaatggtttaaggaacatattgtattgttttcactcgtgtcgttgtaattcacttttatcctaaatcatgaaacttcatgggtgtgttgagtgttttgc 11769987  T
Q  249 a-tgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttgaagacaat 346  Q
    | |||||||||||||| ||||||||| ||||| |||||| ||| |||| | |||| |||||   ||   ||||| | |||||||| | ||||||||||||    
T  11769986 agtgagaaatcatgtaaatcgaaaaatcaagacatcacatgaatgatcaaagatatgaagattgaagaccaatggttcttagaaggtttttgaagacaat 11769887  T
Q  347 acaaagtgaagataattcatttcaagttcc 376  Q
    |||||||||||| |||||||||||||||||    
T  11769886 acaaagtgaagaaaattcatttcaagttcc 11769857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 142 - 376
Target Start/End: Original strand, 23223425 - 23223665
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaa-tcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttg 238  Q
    |||||||| |||||||||||||||||   ||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||| || ||  ||     
T  23223425 gaggagttgtcaatggtttgaggaacacattgtattttttttcactcgattcgttgtaatttacttttatcctaaatcatgcaactccaaaggtgttttt 23223524  T
Q  239 agtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatga-tcttagaa-gttat 335  Q
    | | |||| || |||||||||||||| ||| | ||  ||||| ||| || ||||  || |||||| |||||   |||  |||| | || ||||| ||| |    
T  23223525 aatgttttgtagtgagaaatcatgtaaatcaacaagtcaagacatcgcatgaagattcaaggatatgaagattgaaaaccaataattcatagaaggtttt 23223624  T
Q  336 ttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  23223625 ttgaagacaatacaaagtgaaaaaaattcatttcaagttcc 23223665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 142 - 371
Target Start/End: Complemental strand, 25494580 - 25494357
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagt 241  Q
    |||||||| ||||||||||||||||| | |||| || ||||   | || || ||||||||||||||||||||||||||||||||| ||||| |||         
T  25494580 gaggagttgtcaatggtttgaggaacatattgtcttgttttctcttgagtccttgtaatttacttttatcctaaatcatgcaactacataggtgt----- 25494486  T
Q  242 ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaa 340  Q
     ||| || |||||||||||||| ||||| ||| ||||| ||||||  ||||| | | |||| |||||   ||   |||| | ||||||||| | ||||||    
T  25494485 -tttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacattaaggagc-aagatatgaagattgaagaccaatggttcttagaaggtttttgaa 25494388  T
Q  341 gacaatacaaagtgaagataattcatttcaa 371  Q
    |||||||||||||||||| ||||||||||||    
T  25494387 gacaatacaaagtgaagaaaattcatttcaa 25494357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 142 - 376
Target Start/End: Original strand, 30675498 - 30675735
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 239  Q
    |||||||| ||||||||||||||||| | ||||||| |||| | |||| || |||||||  |||||| ||||| ||||||||||||||||| ||  ||||    
T  30675498 gaggagttgtcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaatacacttttgtcctatatcatgcaactccataggtgttttga 30675597  T
Q  240 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttattt 337  Q
    || |||| || |||||||||||||| ||||  ||   |||| ||||   |||||||| || ||  |||||   ||| ||||| | ||||||||| | |||    
T  30675598 gtgttttatagtgagaaatcatgtaaatcggcaatttaagacatcatgtgaaggatcaagaatgtgaagattgaaa-tcaatggttcttagaaggttttt 30675696  T
Q  338 gaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  30675697 gaagataatacaaagtgaagaaaattcatttcaagttcc 30675735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 99 - 413
Target Start/End: Original strand, 21548619 - 21548936
Alignment:
Q  99 tagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgta 198  Q
    ||||||| |||||||||| |||||| |||||   |||| |||  |||||||    |||||||||| |||||||| |||| |||| | |||| || |||||    
T  21548619 tagtgtatttatttgcatatgaaggcaaattagtagtccattaaaggagttgatgatggtttgagaaactttttatattgttttcattcgagtcgttgta 21548718  T
Q  199 atttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcg 296  Q
    ||| | ||||||||||||  |||||||||||||  ||||  |||||||| || || ||||||| ||| |||| |||||||||| |||||   ||| || |    
T  21548719 attcagttttatcctaaaaaatgcaactccataagtgtttggagtctttctagtgtgaaatcaagtaaatcggaaaaacaagacatcacgtaaagaattg 21548818  T
Q  297 aggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaa 395  Q
     ||||| |||||   ||  | ||| | |||||||||  ||||||||| |||||||  |||| | ||||||||| ||||||||||| |||| |||| ||||    
T  21548819 tggatatgaagattgaagctaaatggttcttagaagacatttgaagataatacaagttgaaaaaaattcatttgaagttccaaggcattacaagacgaaa 21548918  T
Q  396 gaatggccgaaaaagggt 413  Q
    |||||   ||||||||||    
T  21548919 gaatgctagaaaaagggt 21548936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 142 - 376
Target Start/End: Original strand, 26657490 - 26657727
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 239  Q
    |||||||| ||||||||||||||||  |  |||||| |||| | ||||||| |||||||| |||||||||||| |||| |||||||||||| ||  ||||    
T  26657490 gaggagttgtcaatggtttgaggaatataatgtattgttttcactcgattcgttgtaattcacttttatcctagatcacgcaactccataggtgttttga 26657589  T
Q  240 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga-cgaaaattcaat-gatcttagaagttatt 336  Q
    || |||| || ||| |||||||||| ||||| ||| ||||| || |   |||||||| ||| || ||| | ||  || ||||| | ||||| ||| | ||    
T  26657590 gtgttttgtagtgaaaaatcatgtaaatcgacaaatcaagacattaggtgaaggatcaaggctatgaaaatcg--aagtcaatagttcttataaggtttt 26657687  T
Q  337 tgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  26657688 tgaagacaaaacaaagtgaagaaaattcatttcaagttcc 26657727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 152 - 358
Target Start/End: Complemental strand, 25728000 - 25727790
Alignment:
Q  152 caatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-ta 248  Q
    ||||||||| |||||  | ||||||| |||| | || | || |||||||| ||||||||||||||||||||||||| |||| ||  |||||| |||| ||    
T  25728000 caatggtttaaggaatgtattgtattgttttcactctaatcgttgtaattcacttttatcctaaatcatgcaactcaataggtgttttgagtgttttgta 25727901  T
Q  249 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaata 347  Q
     |||||||||||||| ||||| ||| ||| |||||||| |||||||  |||||| |||||   ||  ||||| | |||| |||| | ||||||||||||     
T  25727900 gtgagaaatcatgtaaatcgacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaagacaatc 25727801  T
Q  348 caaagtgaaga 358  Q
    |||||||||||    
T  25727800 caaagtgaaga 25727790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 152 - 358
Target Start/End: Complemental strand, 25736408 - 25736198
Alignment:
Q  152 caatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-ta 248  Q
    ||||||||| |||||  | ||||||| |||| | || | || |||||||| ||||||||||||||||||||||||| |||| ||  |||||| |||| ||    
T  25736408 caatggtttaaggaatgtattgtattgttttcactctaatcgttgtaattcacttttatcctaaatcatgcaactcaataggtgttttgagtgttttgta 25736309  T
Q  249 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaata 347  Q
     |||||||||||||| ||||| ||| ||| |||||||| |||||||  |||||| |||||   ||  ||||| | |||| |||| | ||||||||||||     
T  25736308 gtgagaaatcatgtaaatcgacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaaggtttttgaagacaatc 25736209  T
Q  348 caaagtgaaga 358  Q
    |||||||||||    
T  25736208 caaagtgaaga 25736198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 110 - 295
Target Start/End: Original strand, 18795163 - 18795350
Alignment:
Q  110 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 209  Q
    |||||||||||||||||||   | |||  || ||||| || ||||||||||||||||| ||||||||  |||| | | || | |||||||||||||||||    
T  18795163 tttgcatttgaaggaaaataagaggtcatttagaggatttatcaatggtttgaggaacattttgtatcgttttcatttgagtaattgtaatttactttta 18795262  T
Q  210 tcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatc 295  Q
    |||||| |||| || || ||||| ||  ||||||| ||||| ||||||||| |||| |||   ||||||||| |||||| || |||||    
T  18795263 tcctaagtcatacagcttcataggtgttttgagtcattttagtgagaaatcgtgtaaatcagcaaaacaagacatcacatgatggatc 18795350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 19884190 - 19884276
Alignment:
Q  146 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 232  Q
    |||| ||||||||||||||||| |||| |||| |||| | |||||||  |||||||  |||||||||||||||||||||||||||||    
T  19884190 agttatcaatggtttgaggaaccttttatattgttttcattcgattcgatgtaattctcttttatcctaaatcatgcaactccatag 19884276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 158 - 307
Target Start/End: Complemental strand, 27461266 - 27461114
Alignment:
Q  158 tttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaa 255  Q
    |||||||||| ||||||||| |||| | || | |  || ||||| ||||||||||||||| |||||||| ||||| ||||   |||||||||| | ||||    
T  27461266 tttgaggaacattttgtattgttttcattcaagttgttataattcacttttatcctaaattatgcaacttcataggtgtttgtagtctttttagtaagaa 27461167  T
Q  256 atcatgtagatc-gaaaaaacaagatatcacacgaaggatcgaggataagaag 307  Q
    ||||||||  || |||||||||||| |||||| ||| ||||||||||| ||||    
T  27461166 atcatgtaagtcggaaaaaacaagacatcacatgaaagatcgaggatatgaag 27461114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 23505947 - 23506010
Alignment:
Q  316 tcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaag 379  Q
    |||||| |||| ||||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  23505947 tcaatggtcttggaagacatttgaagacaatacaaagtgaagaaaattcatttcaagttccaag 23506010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 300
Target Start/End: Complemental strand, 25730663 - 25730511
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttt-t 247  Q
    ||||||| ||||||| | | ||||||| |||| | || | |||||| |||| | |||||||||||||||||||||| || || ||||  |||| |||| |    
T  25730663 tcaatggcttgaggagcgtattgtattgttttcattcaaatcattgaaattcaattttatcctaaatcatgcaacttcacaggtgttttgagtgttttgt 25730564  T
Q  248 aatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgagga 300  Q
    |  ||||||||||||| ||||| ||| |||||||||||| |||||||| ||||    
T  25730563 agcgagaaatcatgtaaatcgacaaatcaagatatcacatgaaggatcaagga 25730511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 50047195 - 50047284
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 231  Q
    |||||||| |||||| |||||| ||| | ||||||| |||| | |||| |||| |||||| |||||||||||||||||| ||||||||||    
T  50047195 gaggagttgtcaatgatttgagaaacatattgtattgttttcactcgagtcatggtaattcacttttatcctaaatcatacaactccata 50047284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 194 - 350
Target Start/End: Original strand, 31313618 - 31313777
Alignment:
Q  194 ttgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaag 291  Q
    |||||||| |||||||||||||||||||||||| ||||| ||  |||||| |||||| | |||||||||||| || | |||||||| | |||||  ||||    
T  31313618 ttgtaattcacttttatcctaaatcatgcaacttcataggtgttttgagtttttttagtaagaaatcatgtaaattggaaaaacaatacatcacgtgaag 31313717  T
Q  292 gatcgaggataagaagacgaaaattcaatga-tcttagaagttatttgaagacaatacaa 350  Q
    |||  || ||| |||||   ||  ||||||| ||||| ||| | ||||||||||||||||    
T  31313718 gattaagaatatgaagaatgaagatcaatgattcttataaggtttttgaagacaatacaa 31313777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 8247758 - 8247663
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    |||||| | ||||||||||||||||| | || |||| |||| | | || ||||||||||||  ||||| |||| ||||||||||||||||| ||||    
T  8247758 gaggagatatcaatggtttgaggaacatattttattattttcacttgagtcattgtaattttgttttaccctagatcatgcaactccataggtgtt 8247663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 12810336 - 12810418
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaa 224  Q
    |||||||| ||||||||||||||||| | ||||||| |||| | || | || |||||||| | |||||||||| |||||||||    
T  12810336 gaggagttgtcaatggtttgaggaacatattgtattgttttcattcaagtcgttgtaattcatttttatcctagatcatgcaa 12810418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 18391100 - 18391186
Alignment:
Q  146 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 232  Q
    |||| ||||||||||||| ||| |||| |||| |||| | | || || |||||||| |||||||||||| ||||||||| |||||||    
T  18391100 agttgtcaatggtttgagtaacattttatattattttcatttgagtcgttgtaattaacttttatcctagatcatgcaattccatag 18391186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 12423831 - 12423778
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  ||||||||||||||||||||||  |||||||||||||||||    
T  12423831 tcttagaaggttgttgaagacaatacaaagtgaaggaaattcatttcaagttcc 12423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 248
Target Start/End: Complemental strand, 15417062 - 15416966
Alignment:
Q  154 atggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 248  Q
    |||||||||| ||| |||| |||| |||| | || ||||||| ||||| ||||||||| ||||||||||||||  |||| ||  |||||||||||||    
T  15417062 atggtttgagaaacattttttattgttttcattcaattcattttaattcacttttatcttaaatcatgcaactgtataggtgttttgagtcttttta 15416966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 30781971 - 30782011
Alignment:
Q  336 ttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  30781971 ttgaagacaatacaaagtgaagaaaattgatttcaagttcc 30782011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 25665676 - 25665629
Alignment:
Q  333 tatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
    ||||| |||||||||||||||||||| || |||||| |||||||||||    
T  25665676 tatttaaagacaatacaaagtgaagaaaaatcatttgaagttccaagg 25665629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 12424004 - 12423926
Alignment:
Q  153 aatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 231  Q
    ||||||||||||||| | |  |||| |||| | |||| ||||||||||| | ||||||| || ||||||||||||||||    
T  12424004 aatggtttgaggaacatatgatattgttttcactcgagtcattgtaattcagttttatcttagatcatgcaactccata 12423926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 23519810 - 23519768
Alignment:
Q  191 tcattgtaatttacttttatcctaaatcatgcaactccatagt 233  Q
    ||||||||||| |||||||||||| |||||||||||| |||||    
T  23519810 tcattgtaattcacttttatcctagatcatgcaactctatagt 23519768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 9328365 - 9328418
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| | |||||||||||||| ||||||||| |||||| | ||||||||    
T  9328365 tcttagaaggtttttgaagacaatactaagtgaagaaaattcagtccaagttcc 9328418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 23519685 - 23519632
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  |||||||||||| |||||||||| |||| ||||||||||||    
T  23519685 tcttagaaggttgttgaagacaatagaaagtgaagaaaatttatttcaagttcc 23519632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 21551010 - 21550930
Alignment:
Q  112 tgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattc 192  Q
    |||||||||||| ||||   | ||| ||| |||||||| || |||||||||||||| ||||||||| |||| | |||||||    
T  21551010 tgcatttgaaggcaaatcagaggtcaattagaggagttgtctatggtttgaggaacattttgtattgttttcattcgattc 21550930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 50047386 - 50047426
Alignment:
Q  336 ttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    |||||||||||||||| |||||| ||||||||| |||||||    
T  50047386 ttgaagacaatacaaaatgaagaaaattcattttaagttcc 50047426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 2e-41; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 114 - 374
Target Start/End: Original strand, 19331497 - 19331759
Alignment:
Q  114 catttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcct 213  Q
    ||||||||||||||||  || || ||| |||||||| ||||| ||||||| ||||||||||||| | || | |||| || |||||||||| |||||||||    
T  19331497 catttgaaggaaaattagaattcaattagaggagttgtcaattgtttgagaaactttttgtattgtgttcattcgagtcgttgtaatttagttttatcct 19331596  T
Q  214 aaatcatgcaactccatagttgttgagtctttttaatgagaaatcatgtagatcg-aaaaaacaagatatcacacgaaggatcgaggataagaagacgaa 312  Q
    ||||||||||| |||||   | ||||||||||||  |||||||||||||| ||||  ||||||||   ||||   ||||||||||||||| |||||   |    
T  19331597 aaatcatgcaattccatgtgttttgagtcttttttgtgagaaatcatgtaaatcgttaaaaacaaagcatcaagtgaaggatcgaggatatgaagattga 19331696  T
Q  313 aattcaatga-tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagtt 374  Q
    |||||||||| | |||||||  ||||||||||||||||| |||||||||| |||||| |||||    
T  19331697 aattcaatgatttttagaagacatttgaagacaatacaatgtgaagataagtcatttgaagtt 19331759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 59 - 237
Target Start/End: Complemental strand, 23157975 - 23157794
Alignment:
Q  59 ttgatgatggaataacatatgatatttttagct---ttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaat 155  Q
    ||||||||||||||||||||||| ||||| |||   || ||||||||    || ||||||||||||||||||||  ||||| ||| |||||||| |||||    
T  23157975 ttgatgatggaataacatatgatgttttttgctatgttttttttagttattttctttgcatttgaaggaaaattagaagtcaattagaggagttgtcaat 23157876  T
Q  156 ggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    |||||||||||||||| ||||| |||| | | || || |||||||| ||||||||| |||||||||||| | ||||| ||||    
T  23157875 ggtttgaggaacttttggtattgttttcatttgagtcgttgtaattcacttttatcataaatcatgcaaatgcataggtgtt 23157794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 60 - 294
Target Start/End: Original strand, 20694572 - 20694808
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctattt-gaggagttttcaatggt 158  Q
    |||| |||||| | ||||||||| ||| |||| | ||||||||    |||||||||||| |||||||||| ||||  ||||| ||||| || ||||||||    
T  20694572 tgataatggaacatcatatgatactttaagctatgtttttagttattttatttgcatttaaaggaaaattaaaaga-tatttagaggatttgtcaatggt 20694670  T
Q  159 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaa 256  Q
    ||||||||||||||||||| |||| | |||| ||||||||||| | |||||||| |||| || ||||| ||||  ||  ||||||||||||| | |||||    
T  20694671 ttgaggaactttttgtattgttttcattcgagtcattgtaattcagttttatcccaaattattcaactgcatatgtgttttgagtctttttagtaagaaa 20694770  T
Q  257 tcatgtagatcgaaaaaacaagatatcacacgaaggat 294  Q
    ||||||| ||||  ||||||||| |||| | |||||||    
T  20694771 tcatgtaaatcggcaaaacaagacatcatatgaaggat 20694808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 145 - 379
Target Start/End: Complemental strand, 7742967 - 7742730
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtc 242  Q
    ||||| |||||||||||| |||| ||||||||| ||||   |||| || |||||||| ||||||||||||||||||| ||   ||||  ||||  ||||     
T  7742967 gagttgtcaatggtttgaagaacattttgtattgttttcgttcgagtctttgtaattcacttttatcctaaatcatgtaaaatcatatgtgttttgagtt 7742868  T
Q  243 tttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttgaag 341  Q
    ||||||||||||||||||||| |||   ||||||| | |||||  |||| ||||| |||| ||||||  ||  |||||| | |||||||| | |||||||    
T  7742867 tttttaatgagaaatcatgtaaatcagtaaaacaaaacatcacgtgaagaatcgaagatatgaagactgaagatcaatggttcttagaaggtctttgaag 7742768  T
Q  342 acaatacaaagtgaagataattcatttcaagttccaag 379  Q
    ||||||||||||||||| || || ||||||||| ||||    
T  7742767 acaatacaaagtgaagaaaaatcgtttcaagtttcaag 7742730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 145 - 412
Target Start/End: Complemental strand, 19763988 - 19763713
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtctt 244  Q
    ||||| |||| |||||| ||||||||||||||| |||| | | ||  || |||| || | |||||||||||||||||||||| |||   | |||||||||    
T  19763988 gagttctcaagggtttgtggaactttttgtattgttttcatttgaggcaatgtagttcagttttatcctaaatcatgcaacttcatgtgttttgagtctt 19763889  T
Q  245 tttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagac-gaaaattcaat-------gatcttagaagttatt 336  Q
    |||| |||||||||||||| ||||  ||||| ||| ||||   |||| ||| |||| | |||||  ||| ||| ||        | ||||||||| | ||    
T  19763888 tttagtgagaaatcatgtaaatcggcaaaacgagacatcaagtgaagaatcaaggaaatgaagattgaagattgaagatcaagggttcttagaaggtttt 19763789  T
Q  337 tgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaaggg 412  Q
    |||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||| ||||| |  ||||||||||    
T  19763788 tgaagataatacaaagtgaagaaaattcatttcaagttccaaaggattgaaagatggaagaacgctcgaaaaaggg 19763713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 142 - 308
Target Start/End: Original strand, 26070488 - 26070656
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 239  Q
    |||||||| |||||  |||||||||  ||| ||||| |||| | |||| | | ||||||| | ||||||| |||||||||||||||||||  ||||  ||    
T  26070488 gaggagttgtcaatcatttgaggaaaatttagtattgttttcattcgagttaatgtaattcagttttatcataaatcatgcaactccataagtgttttga 26070587  T
Q  240 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    ||||||||| |||||||||||||| || |  ||||||||| |||||| |||||||| |||||| |||||    
T  26070588 gtctttttagtgagaaatcatgtaaattggcaaaacaagacatcacatgaaggatcaaggatatgaaga 26070656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 142 - 302
Target Start/End: Original strand, 24841767 - 24841930
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttg--a 239  Q
    |||||||||||||||||||||||||| | ||||||| |||| | |||| || |||||| | |||||||||||| |||||| |||||||||| ||||   |    
T  24841767 gaggagttttcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaagtcacttttatcctagatcatggaactccataggtgttttta 24841866  T
Q  240 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 302  Q
    || |||| || |||||||||||||| || |||||| ||||| | |||  |||||||| ||||||    
T  24841867 gtgttttgtagtgagaaatcatgtaaattgaaaaatcaagacaacacgtgaaggatcaaggata 24841930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 194 - 376
Target Start/End: Complemental strand, 26330116 - 26329933
Alignment:
Q  194 ttgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaag 291  Q
    ||||||||  ||||||||||| ||||||||||| ||||| ||||  |||| ||||  | | ||||||||||| || |||||| ||||| |||||| ||||    
T  26330116 ttgtaattcccttttatcctagatcatgcaacttcataggtgttttgagtgttttgta-gtgaaatcatgtaaattgaaaaatcaagacatcacatgaag 26330018  T
Q  292 gatcgaggataagaagacgaaaattcaatgatc-ttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    |||| |||||| |||||   || | ||||| || ||||||| | ||| |||||||||||||||||||| |||||||||||||||||    
T  26330017 gatcaaggatatgaagattgaagt-caatggtccttagaaggttttttaagacaatacaaagtgaagaaaattcatttcaagttcc 26329933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 376
Target Start/End: Complemental strand, 11274369 - 11274193
Alignment:
Q  204 cttttatcctaaatcatgcaactccatagttg--ttgagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgagga 300  Q
    ||||||||||||||||||||||||||||| ||  |||||| |||| || | |||||||||||| ||||| ||| ||||| |||||| |||||||| ||||    
T  11274369 cttttatcctaaatcatgcaactccataggtgttttgagtgttttgtagtaagaaatcatgtatatcgacaaatcaagacatcacatgaaggatcaagga 11274270  T
Q  301 taagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    || |||||   ||   |||| | ||||||||| | ||||||||||||||||  ||| || | |||||||||||||||    
T  11274269 tatgaagattgaagaccaatggttcttagaaggtctttgaagacaatacaagatgatgaaatttcatttcaagttcc 11274193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 18222510 - 18222602
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    ||||| ||||||||||||| ||| | ||||||| |||| | |||| ||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  18222510 gagttgtcaatggtttgagaaacatattgtattgttttaactcgagtcattgtaattcacttttatcctaaatcatgcaaatccataggtgtt 18222602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 110 - 247
Target Start/End: Original strand, 20083448 - 20083586
Alignment:
Q  110 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 209  Q
    |||||||||||||| ||||| ||| | |||| |||||||| ||||| ||||||||||| |||| |||| |||||| |||| |  |||||||| | || ||    
T  20083448 tttgcatttgaaggcaaattaaaaat-tattagaggagttgtcaatagtttgaggaacattttttattgtttttattcgagtatttgtaattcagttcta 20083546  T
Q  210 tcctaaatcatgcaactccatagttg--ttgagtcttttt 247  Q
    ||||||||||||||| ||||||| ||  ||||||||||||    
T  20083547 tcctaaatcatgcaattccataggtgttttgagtcttttt 20083586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 205 - 368
Target Start/End: Original strand, 25367671 - 25367836
Alignment:
Q  205 ttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 302  Q
    ||||||| |||||||||||||| ||||| ||||  ||||||||||| |||||||||||||| |||| ||||  |||  |||||| |||  ||||| ||||    
T  25367671 ttttatcataaatcatgcaacttcataggtgttttgagtctttttagtgagaaatcatgtaaatcggaaaagaaaggcatcacatgaaatatcgatgata 25367770  T
Q  303 agaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcattt 368  Q
     |||||  ||| |||||| | |||||||||  ||||||||| |||| |||||||||| |||||||||    
T  25367771 cgaagattaaagttcaatggttcttagaagacatttgaaga-aatagaaagtgaagaaaattcattt 25367836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 151 - 376
Target Start/End: Original strand, 17027550 - 17027778
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtcttttt--- 247  Q
    |||| |||||||||||| | ||| ||| |||| | | || || |||||||| ||||||||||||||||| |||||||||||| ||||  | || |||       
T  17027550 tcaagggtttgaggaacatattgaattgttttcacttgagtcgttgtaattcacttttatcctaaatcacgcaactccataggtgttttgactgttttgc 17027649  T
Q  248 aatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatg-atcttagaagttatttgaagacaat 346  Q
     ||||||||||||||| ||||||||| ||||| |||||  | | |||| | |||| |||||   || || ||||  ||||||||| |  |||||||||||    
T  17027650 catgagaaatcatgtaaatcgaaaaatcaagacatcacgtgcaagatcaaagatatgaagattgaagtt-aatgcttcttagaaggttcttgaagacaat 17027748  T
Q  347 acaaagtgaagataattcatttcaagttcc 376  Q
    |||||||||||| |||| ||||||| ||||    
T  17027749 acaaagtgaagaaaattaatttcaatttcc 17027778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 142 - 376
Target Start/End: Complemental strand, 25594793 - 25594556
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 239  Q
    ||||| || ||||||||||||||||| | ||||||| |||| | | || |  ||||| || | ||||||||||||| |||||||| ||||  ||||  ||    
T  25594793 gaggatttctcaatggtttgaggaacatattgtattgttttcactggagttgttgtatttcatttttatcctaaatgatgcaacttcatatgtgttttga 25594694  T
Q  240 gtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttattt 337  Q
    || |||| || |||||||||||||| |||||||||  |||| |||||| ||| |||| |||||| |||||   ||  ||||| ||| ||||||| | |||    
T  25594693 gtgttttatagtgagaaatcatgtaaatcgaaaaattaagacatcacatgaacgatcaaggatatgaagattgaatatcaatggatattagaaggttttt 25594594  T
Q  338 gaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    | ||| ||| ||||||||||| |||||| ||||||||||    
T  25594593 gtagataatgcaaagtgaagaaaattca-ttcaagttcc 25594556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 143 - 375
Target Start/End: Complemental strand, 16622767 - 16622541
Alignment:
Q  143 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtc 242  Q
    ||||||| ||||||||||||||||| | ||||||| | || | || |||  |||||||  |||||||||||| ||||||||||| ||||| |||          
T  16622767 aggagttgtcaatggtttgaggaacatgttgtattgtattcactctatttgttgtaatacacttttatcctagatcatgcaacttcataggtgt------ 16622674  T
Q  243 tttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaag 341  Q
    |||  | |||||||||||||| || || ||| ||||| |||||| |||||||  |||||| |||||   ||   || | | ||||||||| | |||||||    
T  16622673 tttgcagtgagaaatcatgtaaattgacaaatcaagacatcacatgaaggattaaggatatgaagattgaagaccagtggttcttagaaggt-tttgaag 16622575  T
Q  342 acaatacaaagtgaagataattcatttcaagttc 375  Q
    |||||||||| |||||| ||||||||||||||||    
T  16622574 acaatacaaattgaagaaaattcatttcaagttc 16622541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 301
Target Start/End: Complemental strand, 24411030 - 24410869
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 239  Q
    |||||||| ||||||||||||||||  ||||||||| |||| | | || || |||||||| | |||||||||||||| |||||||    || ||  ||||    
T  24411030 gaggagttgtcaatggtttgaggaaaattttgtattgttttcatttgagtcgttgtaattcagttttatcctaaatcgtgcaacttgcgaggtgttttga 24410931  T
Q  240 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggat 301  Q
    || |||||| |||||||||||||  || |  |||| |||| |||||| ||||||||||||||    
T  24410930 gtatttttagtgagaaatcatgtcaattggcaaaataagacatcacatgaaggatcgaggat 24410869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 25680616 - 25680705
Alignment:
Q  148 ttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    |||||||||||||||||||| | ||||||| |||| | |||| || |||||||| | |||||| ||||||||||||||| ||||| ||||    
T  25680616 ttttcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaattcaattttattctaaatcatgcaacttcataggtgtt 25680705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 16634063 - 16634155
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    ||||| ||||||||||||| ||| | ||||||| |||| | |||| || |||||||| |||||||| |||||||||||||||| |||| ||||    
T  16634063 gagttgtcaatggtttgagaaacatattgtattgttttcactcgagtcgttgtaattcacttttattctaaatcatgcaactctataggtgtt 16634155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 17382136 - 17382052
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaact 226  Q
    |||||||| ||||||||||||||||| | ||||||| |||| | || | || ||||| || ||||||||||||||||||||||||    
T  17382136 gaggagttgtcaatggtttgaggaacatattgtattgttttcactcaaatcgttgtatttcacttttatcctaaatcatgcaact 17382052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 194 - 380
Target Start/End: Original strand, 18178166 - 18178357
Alignment:
Q  194 ttgtaatttacttttatcctaaatcat-gcaactccatagttgttg--agtctttttaatgagaaatcatgtaga-tcgaaaaaacaagatatcacacga 289  Q
    |||||||| | |||||||||||||||| |||||| ||||| | ||   |||||||||| |||||||||||||| | | |||||||||||| | | || ||    
T  18178166 ttgtaattcagttttatcctaaatcattgcaacttcataggtatttttagtctttttagtgagaaatcatgtaaattggaaaaaacaagacaccgcatga 18178265  T
Q  290 aggatcgaggataagaaga-cgaaaattcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
    ||||||||||||| |||||  ||| |   | || |||| |||| | |||||||| |||||||| |||| | ||||||| |||||||||||||    
T  18178266 aggatcgaggatatgaagattgaagaccaattgttcttggaaggtctttgaagataatacaaattgaataaaattcatctcaagttccaagg 18178357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 183
Target Start/End: Complemental strand, 22644047 - 22643924
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 159  Q
    ||||||| ||||||||||| |||||||||| | ||||||||||    || |||| |||||||||||||||  |||||  || |||||||| |||||||||    
T  22644047 tgatgattgaataacatataatatttttaggtatatttttagttattttctttgtatttgaaggaaaattagaagtcatttagaggagttgtcaatggtt 22643948  T
Q  160 tgaggaactttttgtattcttttt 183  Q
    |||  |||||| ||| || |||||    
T  22643947 tgattaactttgtgtttttttttt 22643924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 24517368 - 24517463
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    |||||||| ||||||||||||||||| | ||||||| |||| |  ||| || |||||||| || |||||||| ||||||| |||||||||| ||||    
T  24517368 gaggagttgtcaatggtttgaggaacatattgtattgttttcacccgagtcgttgtaattcacatttatccttaatcatgtaactccataggtgtt 24517463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 18873002 - 18872912
Alignment:
Q  289 aaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaag 379  Q
    |||||| ||||||| ||||| | || ||||||||  ||||| | || |||||||||||||||| |||||| ||||||||| ||||||||||    
T  18873002 aaggatggaggatatgaagatggaagttcaatgagtttagacggtagttgaagacaatacaaattgaagaaaattcatttgaagttccaag 18872912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 24268581 - 24268655
Alignment:
Q  154 atggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactcc 228  Q
    |||||||||||||| | ||||||| |||| | |||| ||||| ||||| |||||||||||| |||||||||||||    
T  24268581 atggtttgaggaacatcttgtattgttttcactcgagtcattataattcacttttatcctagatcatgcaactcc 24268655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 24345210 - 24345284
Alignment:
Q  154 atggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactcc 228  Q
    |||||||||||||| | ||||||| |||| | |||| ||||| ||||| |||||||||||| |||||||||||||    
T  24345210 atggtttgaggaacatcttgtattgttttcactcgagtcattataattcacttttatcctagatcatgcaactcc 24345284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 15205658 - 15205752
Alignment:
Q  143 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    ||||||| ||| ||||||||||||| | ||||||| |||| | |||| || |||||||| | |||| ||||| ||||||||| ||||||| ||||    
T  15205658 aggagttgtcagtggtttgaggaacatattgtattgttttcactcgagtcgttgtaattcagttttctcctagatcatgcaattccataggtgtt 15205752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 25367555 - 25367621
Alignment:
Q  63 tgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaatt 129  Q
    ||||||||||||||||||  |||||| || | |||||||| || || ||||||||||||||||||||    
T  25367555 tgatggaataacatatgacgtttttaactatgtttttagtatatttctttgcatttgaaggaaaatt 25367621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 398
Target Start/End: Complemental strand, 22643821 - 22643746
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaa 398  Q
    ||||| ||| |||||||| |||||||||| |||||| ||||||||||||  ||||||| |||  |||| |||||||    
T  22643821 tcttaaaaggtatttgaatacaatacaaactgaagaaaattcatttcaaactccaaggtattgcaagacgaaagaa 22643746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 12340115 - 12340026
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 231  Q
    |||||||| ||||||||||||||||| | || |||| |||| | | |  ||||||||||| | |||||| ||| ||||||||||| ||||    
T  12340115 gaggagttgtcaatggtttgaggaacatattatattattttcacttgtgtcattgtaattcagttttatactagatcatgcaacttcata 12340026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 11997968 - 11997900
Alignment:
Q  169 ttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    ||||||||| |||||| ||   |||||| ||||| ||||||| ||||||||||||||| ||||| ||||    
T  11997968 ttttgtattgtttttattcaggtcattgcaatttccttttatactaaatcatgcaacttcataggtgtt 11997900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 342 - 374
Target Start/End: Complemental strand, 18452709 - 18452677
Alignment:
Q  342 acaatacaaagtgaagataattcatttcaagtt 374  Q
    ||||||||||||||||| |||||||||||||||    
T  18452709 acaatacaaagtgaagaaaattcatttcaagtt 18452677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 375
Target Start/End: Original strand, 30072330 - 30072366
Alignment:
Q  339 aagacaatacaaagtgaagataattcatttcaagttc 375  Q
    |||||||||||||||||||| | ||||||||||||||    
T  30072330 aagacaatacaaagtgaagaaatttcatttcaagttc 30072366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 8e-38; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 60 - 308
Target Start/End: Original strand, 19540969 - 19541219
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaatt-gaaagtctatttgaggagttttcaatggt 158  Q
    ||||||||||| | ||||||| ||||||  || | ||||||||    || |||||||||||||||||||| |||  | ||| | ||||||| | ||||||    
T  19540969 tgatgatggaacatcatatgagatttttgcctatgtttttagttattttctttgcatttgaaggaaaattagaatttatatat-aggagttgttaatggt 19541067  T
Q  159 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaa 256  Q
    |||||||||||||||||||  ||| |||||| ||||||||||| | |||||||||||||||||||||||||||| ||  |||||||||| || |||||||    
T  19541068 ttgaggaactttttgtatttatttcaatcgagtcattgtaattcagttttatcctaaatcatgcaactccataggtgttttgagtctttctagtgagaaa 19541167  T
Q  257 tcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    ||||||| ||||  |||| |||| ||||   ||||||||||||||| |||||    
T  19541168 tcatgtaaatcggcaaaataagacatcaagtgaaggatcgaggatatgaaga 19541219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 60 - 211
Target Start/End: Complemental strand, 29647728 - 29647577
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 159  Q
    |||||||||||||||||||||| ||||||||| | || |||||||||||||||||||||||||| |||||  ||||| ||| ||| |||| ||| || ||    
T  29647728 tgatgatggaataacatatgatgtttttagctatgttgttagtgtaattatttgcatttgaaggcaaattagaagtcaattagagtagttgtcattgatt 29647629  T
Q  160 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatc 211  Q
    ||||||||||||| |||| |||| | | || || |||||||| |||||||||    
T  29647628 tgaggaactttttatattgttttcatttgagtcgttgtaattcacttttatc 29647577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 142 - 303
Target Start/End: Complemental strand, 21849174 - 21849011
Alignment:
Q  142 gaggagttt-tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag--ttgttg 238  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||   | || ||||||||||| | ||||||| ||||||||||||||||||||  || |||    
T  21849174 gaggagtttgtcaatggtttgaggaacattttgtattgttttcttt-gagtcattgtaattcagttttatcataaatcatgcaactccataggatttttg 21849076  T
Q  239 agtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataa 303  Q
    |||||||||| |||||||| ||||| |||| || ||||||| |||||| |||||||| |||||||    
T  21849075 agtctttttagtgagaaataatgtaaatcggaagaacaagacatcacatgaaggatcaaggataa 21849011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 27918165 - 27917989
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 159  Q
    |||||||||||||||||||||||||||||||| | |||| | ||||||| |||||||||||||| |||||  || || | |  ||||||| ||| |||||    
T  27918165 tgatgatggaataacatatgatatttttagctatgttttaa-tgtaattctttgcatttgaaggcaaattagaattcaactataggagttgtcattggtt 27918067  T
Q  160 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    |||||||| ||  ||||| |||| | | || || |||||||| |||||||| ||||||||||||||||||||| ||||    
T  27918066 tgaggaacgttgggtattgttttcatttgagtcgttgtaattcacttttatactaaatcatgcaactccataggtgtt 27917989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 146 - 412
Target Start/End: Complemental strand, 18236399 - 18236130
Alignment:
Q  146 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata-gt-tgttgagtct 243  Q
    |||| ||||||||||||| |||  ||| |||| |||| | |||| |  || ||||| ||||||||| ||||||||||||||||||| || | ||||||||    
T  18236399 agttgtcaatggtttgagaaacaatttatattgttttcattcgagttgttataattcacttttatcttaaatcatgcaactccataagtattttgagtct 18236300  T
Q  244 ttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaaga 342  Q
    ||||| ||||||||||||||  |||  ||||||||| |||||| ||||||||    ||| |||||   ||   |||| | ||||||||| |  |||||||    
T  18236299 ttttagtgagaaatcatgtaactcggcaaaacaagacatcacatgaaggatcacaaatatgaagattgaaggccaatggttcttagaaggttgttgaaga 18236200  T
Q  343 caatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaaggg 412  Q
    ||||||||  |||||| |||||||||||||||| |||| ||| ||||| | |||||||  ||||||||||    
T  18236199 caatacaagatgaagaaaattcatttcaagttcaaaggcatttaaagacggaagaatgatcgaaaaaggg 18236130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 308
Target Start/End: Original strand, 24047326 - 24047564
Alignment:
Q  72 aacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctattt-gaggagttttcaatggtttgaggaacttt 170  Q
    |||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||   | || ||||| ||| | || |||||||||| |||||| ||    
T  24047326 aacatatgatattttaggctatgtttttagttattttatttgcatttgaaggaaaataagaggt-tatttagagaaattgtcaatggtttaaggaacatt 24047424  T
Q  171 ttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag--ttgttgagtctttttaatgagaaatcatgtagatcg 268  Q
    ||||||| |||| | |||| ||||||||||| ||||||||||||||| ||||||||||||||   | ||| ||| ||||| ||||||||| |  | ||||    
T  24047425 ttgtattgttttcattcgagtcattgtaattcacttttatcctaaattatgcaactccataggcattttgggtcattttagtgagaaatcctacaaatcg 24047524  T
Q  269 aaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
      ||||||||| ||| || |||||||| |||||| |||||    
T  24047525 gcaaaacaagacatcccatgaaggatcaaggatatgaaga 24047564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 205 - 375
Target Start/End: Complemental strand, 17415201 - 17415028
Alignment:
Q  205 ttttatcctaaatcatgcaactc-catagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggat 301  Q
    ||||||| ||||| ||||||||| ||||| ||||  ||||||||||| ||||||||| |||| ||||  ||||||||| |||||  |||||||||||||     
T  17415201 ttttatcgtaaataatgcaactctcataggtgttttgagtctttttagtgagaaatcgtgtaaatcggcaaaacaagacatcacgtgaaggatcgaggac 17415102  T
Q  302 aagaagacgaaaattcaatgat-cttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttc 375  Q
    | |||||   |||| ||||| | ||||| |||||||||||||||| | |||||||||| ||||||||||||||||    
T  17415101 atgaagattgaaat-caatggttcttaggagttatttgaagacaacaaaaagtgaagaaaattcatttcaagttc 17415028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 71 - 263
Target Start/End: Complemental strand, 22388924 - 22388735
Alignment:
Q  71 taacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaacttt 170  Q
    ||||||||||| ||||||||| | |||||||     || |||||||||||||| |||||  ||||| ||| |||||||| |||||  |||||||||||||    
T  22388924 taacatatgatgtttttagctatgtttttagatattttctttgcatttgaaggcaaattagaagtcaattagaggagttgtcaataatttgaggaacttt 22388825  T
Q  171 ttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtctttttaatgagaaatcatgta 263  Q
    || |||| |||| | | || ||||||||||  | ||||||||| |||||||||||| |||  || ||||||||||| | ||||||||||||||    
T  22388824 tt-tattgttttcatttgagtcattgtaatccagttttatcctgaatcatgcaacttcat--tttttgagtcttttcagtgagaaatcatgta 22388735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 17415322 - 17415211
Alignment:
Q  116 tttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaa 215  Q
    ||||||||||||||  |||||  || |||||||| ||||||| |||||||| |||||||||| |||| | |||||| ||||||||||| ||||||| |||    
T  17415322 tttgaaggaaaattagaagtcatttagaggagttgtcaatgggttgaggaaatttttgtattgttttcattcgattgattgtaatttagttttatcgtaa 17415223  T
Q  216 atcatgcaactc 227  Q
    || |||||||||    
T  17415222 ataatgcaactc 17415211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 21843103 - 21843008
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    ||||||||  ||||||||| |||||| | ||||||| |||| | |||| ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  21843103 gaggagttgccaatggttttaggaacatgttgtattgttttcattcgagtcattgtaatttacttttatcctaaatcatgcaactctataggtgtt 21843008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 95 - 284
Target Start/End: Original strand, 22510914 - 22511104
Alignment:
Q  95 tttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcat 194  Q
    |||||||||||||| |||||||||||||| |||||  ||||  ||| |||||| || || |||||| |||||| ||||||||| |||| | |||| ||      
T  22510914 tttttagtgtaattttttgcatttgaaggcaaattataagtaaattagaggagcttccattggttttaggaac-ttttgtatttttttcattcgagtcgc 22511012  T
Q  195 tgtaatttacttttatcctaaatcatgcaactccatagt-tgttgagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatca 284  Q
    |||||||||| ||||||||||||  |||||||  ||||| | |||| | |||| || |||||||||||||| ||||||||| ||||| ||||    
T  22511013 tgtaatttacgtttatcctaaattgtgcaactatatagtgttttgattgttttgtagtgagaaatcatgtaaatcgaaaaatcaagacatca 22511104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 203 - 380
Target Start/End: Complemental strand, 27417303 - 27417122
Alignment:
Q  203 acttttatcctaaatcatgcaactccatagttgttg--agtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgagg 299  Q
    |||||||||||||||||||||||||||||| ||||   ||| |||| || |||||||||||||| ||||| ||| ||||| |||||| |||||||| | |    
T  27417303 acttttatcctaaatcatgcaactccataggtgttttaagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaatg 27417204  T
Q  300 ataagaa-gacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
    ||| ||| |  ||| |  |||| | ||| ||||| | |||||| ||||||||||||||||| |||||||||||||||||||||    
T  27417203 atatgaatgttgaaga-ccaatggttctaagaaggtttttgaaaacaatacaaagtgaagaaaattcatttcaagttccaagg 27417122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 151 - 380
Target Start/End: Complemental strand, 34063937 - 34063700
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttt- 247  Q
    ||||||||||| ||||||||||||||| |||| | |||| |  |||||||| ||| ||||||||||||||||||||||| |  ||  |||||| |||||     
T  34063937 tcaatggtttgtggaactttttgtattgttttcattcgagttgttgtaattcactattatcctaaatcatgcaactccacaagtgttttgagtttttttt 34063838  T
Q  248 ----aatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaaga 342  Q
        | |||||| ||||||| ||||  ||||||||| |||    |||||||||| |||| |||||   || ||  || | | |||||||  |||||||||    
T  34063837 tttgagtgagaattcatgtaaatcggcaaaacaagacatcgtgtgaaggatcgacgatatgaagatttaattttgatggttattagaagacatttgaaga 34063738  T
Q  343 caatacaaagtgaagataattcatttcaagttccaagg 380  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  34063737 caatacaaagtgaagaaaattcatttgaagttccaagg 34063700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 379
Target Start/End: Original strand, 18818723 - 18818956
Alignment:
Q  154 atggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttg--agtctttttaatg 251  Q
    ||||||| |||||| |||| |||| |||| | | || || ||| |||||| ||||||| |||||||||||| |||||||  |||   |||||||||| ||    
T  18818723 atggtttaaggaacattttatattgttttcatttgagtcgttgaaatttagttttatcataaatcatgcaagtccatagacgttttcagtctttttattg 18818822  T
Q  252 agaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataaga-----agac-gaaaattcaatgatcttagaagttatttgaagacaa 345  Q
    |||||||||||| ||||  ||||||||  |||||  |||||||  |||||| ||     | || ||| ||| |  | ||||||||| | |||||||||||    
T  18818823 agaaatcatgtaaatcggcaaaacaaggcatcacgtgaaggattaaggataggatatgaaaactgaagattaatggttcttagaaggtctttgaagacaa 18818922  T
Q  346 tacaaagtgaagataattcatttcaagttccaag 379  Q
    ||||||||||||| |||||| |||||||||||||    
T  18818923 tacaaagtgaagaaaattcaattcaagttccaag 18818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 236 - 380
Target Start/End: Complemental strand, 14922043 - 14921898
Alignment:
Q  236 ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagtta 334  Q
    ||||||||||||  |||||||||||||| |||| |||||||| | ||||   |||| |||||||||| |||||   || ||||||| | |||||||| ||    
T  14922043 ttgagtctttttcgtgagaaatcatgtaaatcggaaaaacaatacatcatgtgaagaatcgaggatatgaagattgaagttcaatggttcttagaaggta 14921944  T
Q  335 tttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
    | || ||||||||||||||||||| || |||||| || ||||||||    
T  14921943 tatgtagacaatacaaagtgaagaaaaatcatttgaatttccaagg 14921898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 21844730 - 21844646
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaact 226  Q
    |||||||| |||||||||| |||||| | || |||| |||| | |||| ||||||||||||||| ||||||||||||||||||||    
T  21844730 gaggagttgtcaatggttttaggaacatgttatattgttttcattcgagtcattgtaatttactcttatcctaaatcatgcaact 21844646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 17240950 - 17240812
Alignment:
Q  146 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagtcttt 245  Q
    |||| ||||| ||||||||| |||||| |||| |||| | |||| || | |||||||| |||||| ||||||||||||||| ||||| |||||||| |||    
T  17240950 agttgtcaatagtttgagga-ctttttctattgttttcattcgagtcgtcgtaatttagttttattctaaatcatgcaacttcataggtgttgagtgttt 17240852  T
Q  246 ttaatgagaaatcatgtagatcgaaaaaacaagatatcac 285  Q
    ||| ||| ||||||| || || |  ||||||||| |||||    
T  17240851 ttagtgaaaaatcatataaattggcaaaacaagacatcac 17240812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 146 - 301
Target Start/End: Complemental strand, 21505236 - 21505078
Alignment:
Q  146 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtct 243  Q
    |||| ||||||||||||||| | | ||||||| |||| | |||| || || |||||||||||||||||||||||||||||| | ||| ||  |||||| |    
T  21505236 agttgtcaatggtttgaggagcatattgtattgttttcactcgagtctttataatttacttttatcctaaatcatgcaacttcttagatgttttgagtgt 21505137  T
Q  244 ttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggat 301  Q
    ||| || |||| ||||||||| ||||| |||  |||| |||||| ||| |||| |||||    
T  21505136 tttgtagtgaggaatcatgtaaatcgataaattaagacatcacatgaaagatcaaggat 21505078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 35031716 - 35031811
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    |||||||| | ||||||||||||||| | ||||||| |||| | |||| || |||||| |||||||||||||| ||||||||| ||||||| ||||    
T  35031716 gaggagttgttaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaacttacttttatcctagatcatgcaattccataggtgtt 35031811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 17152167 - 17152252
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactc 227  Q
    |||||||| ||||||||||||||||  ||||||||| |||| | |||| || |||||||| ||||||||| ||| |||||||||||    
T  17152167 gaggagttgtcaatggtttgaggaatattttgtattattttcattcgagtcgttgtaattaacttttatcgtaattcatgcaactc 17152252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 380
Target Start/End: Original strand, 24187993 - 24188224
Alignment:
Q  155 tggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaat---catgcaactccatagttgtt--gagtctttt-ta 248  Q
    |||||| |||||||||||||||| | || | |||| ||||||| ||| |||||||||||||||   ||| |||||||| |  ||||  |||| |||| ||    
T  24187993 tggtttaaggaactttttgtattgtattcattcgagtcattgtgattcacttttatcctaaatattcattcaactccaaatgtgttttgagtattttgta 24188092  T
Q  249 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagac-gaaaattcaat-gatcttagaagttatttgaagacaat 346  Q
     |||||||||||||| |||||  || ||||  |||||| |||||||| || ||| |||||  ||| |  |||| ||||||||||  | ||||||||||||    
T  24188093 gtgagaaatcatgtaaatcgaccaatcaaggcatcacatgaaggatcaagaatatgaagattgaaga--caatagatcttagaaagtttttgaagacaat 24188190  T
Q  347 acaaagtgaagataattcatttcaagttccaagg 380  Q
    ||||||||||||  ||||||| ||||| ||||||    
T  24188191 acaaagtgaagaagattcattccaagtgccaagg 24188224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 30705268 - 30705321
Alignment:
Q  194 ttgtaatttacttttatcctaaatcatgcaactccatagttgttgagtcttttt 247  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  30705268 ttgtaatttacttttatcctaaatcatgcaacttcataggtgttgagtcgtttt 30705321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 378
Target Start/End: Original strand, 1732661 - 1732804
Alignment:
Q  236 ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagtta 334  Q
    ||||||||||||  | |||||||||||| || || ||||||||| |||||| |||||||  || ||| |||||   ||  |||||||| |||||||  ||    
T  1732661 ttgagtctttttggtaagaaatcatgtaaattgacaaaacaagacatcacatgaaggattaagaatatgaagattgaagatcaatgattcttagaatata 1732760  T
Q  335 tttgaagacaatacaaagtgaagataattcatttcaagttccaa 378  Q
    ||||||| ||||||||| |||| | |||| ||||||||||||||    
T  1732761 tttgaaggcaatacaaaatgaataaaatttatttcaagttccaa 1732804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 295
Target Start/End: Original strand, 39730474 - 39730616
Alignment:
Q  155 tggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatga 252  Q
    |||||| |||||| |||| |||  |||||| || | || |||||||| |||||||||||||||||||||||||   || ||  |||||| |||||| |||    
T  39730474 tggtttaaggaacattttctatagtttttattcaagtcgttgtaattcacttttatcctaaatcatgcaactctgcaggtgttttgagtatttttagtga 39730573  T
Q  253 gaaatcatgtagatcgaaaaaacaagatatcacacgaaggatc 295  Q
    |||||||| || |||   ||||||||| |||||| ||||||||    
T  39730574 gaaatcatataaatcagcaaaacaagacatcacatgaaggatc 39730616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 145 - 375
Target Start/End: Original strand, 30998788 - 30999021
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtc 242  Q
    ||||| ||||||||||||||||| | ||||||| |||| | | || || ||||| || | |||||||||| ||||| ||||||||||| ||  ||||||     
T  30998788 gagttgtcaatggtttgaggaacatattgtattgttttcacttgagtcgttgtacttcagttttatcctagatcatacaactccataggtgttttgagtg 30998887  T
Q  243 tttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaag 341  Q
    |||| || |||  | | ||||| ||||| ||| ||||||||||   |||||||| |||||| | |   ||| ||  |  | ||||||||| |  ||||||    
T  30998888 ttttgtagtgaagagtgatgtaaatcgacaaatcaagatatcaagtgaaggatcaaggatatgtaattgaagatcaagggttcttagaaggttgttgaag 30998987  T
Q  342 acaatacaaagtgaagataattcatttcaagttc 375  Q
    ||||||||||||| ||| ||||||||||||||||    
T  30998988 acaatacaaagtggagaaaattcatttcaagttc 30999021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 16593667 - 16593614
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  16593667 tcttagaaggttgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 16593614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 22525736 - 22525679
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
    ||||||||| ||||||||||||| |||||||||||| |||| |||||||||| |||||    
T  22525736 tcttagaaggtatttgaagacaacacaaagtgaagaaaatttatttcaagtttcaagg 22525679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 32276646 - 32276526
Alignment:
Q  110 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 209  Q
    |||||||||||||||||||   | |||  ||  ||||| | |||||||||||| |||| ||||| ||| |||||| |||| ||||||||||| |  ||||    
T  32276646 tttgcatttgaaggaaaataagaggtcatttaaaggagatgtcaatggtttgaagaacattttgcattgtttttattcgagtcattgtaattgaagttta 32276547  T
Q  210 tcctaaatcatgcaactccat 230  Q
    | ||||||||| |||||||||    
T  32276546 ttctaaatcattcaactccat 32276526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 28278524 - 28278434
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 232  Q
    ||||| || |||||||||||| |||| |  |||||| |||| | | || || |||||||| |||||||||||| |||||||||||||||||    
T  28278524 gaggatttctcaatggtttgaagaacatagtgtattattttcacttgagtcgttgtaattcacttttatcctagatcatgcaactccatag 28278434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 25474235 - 25474288
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  |||||||||||| |||||||||| ||||||||||| |||||    
T  25474235 tcttagaaggttgttgaagacaatataaagtgaagaaaattcatttcaggttcc 25474288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 203 - 231
Target Start/End: Original strand, 15829205 - 15829233
Alignment:
Q  203 acttttatcctaaatcatgcaactccata 231  Q
    |||||||||||||||||||||||||||||    
T  15829205 acttttatcctaaatcatgcaactccata 15829233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 203 - 379
Target Start/End: Original strand, 17187250 - 17187427
Alignment:
Q  203 acttttatcctaaatcatgcaactccatagttgttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 302  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| ||| |||||||||| ||||| |||| || | ||||   ||| ||| |||||||    
T  17187250 acttttatcctaaatcatgcaacttcataggtgttgagtctttttagtgataaatcatgtaaatcgacaaaataacacatcaagtgaatgattgaggata 17187349  T
Q  303 agaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaag 379  Q
     |||||   || |||| | | ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  17187350 tgaagattgaagttcagtggttcttagaagttatttgaagacaatacaaagtaaagaaaattcatttcaagtttcaag 17187427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 95 - 379
Target Start/End: Original strand, 19601765 - 19602052
Alignment:
Q  95 tttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcat 194  Q
    |||||||||||||| ||||||||| |||| ||||| |||||| ||| |||||||| ||| |||||||||||||||||| |||| |||| | || | |  |    
T  19601765 tttttagtgtaattctttgcatttaaaggcaaattaaaagtcaattagaggagttgtcattggtttgaggaactttttctatttttttcattcaaattgt 19601864  T
Q  195 tgtaatttacttttatcctaaatcatgcaactccatag--ttgttgagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaag 291  Q
    ||||||| ||||||||||||||||||||||||||||||   | || ||  |||| || |||||||||||||| ||| | ||| ||||| |||||  |||     
T  19601865 tgtaattcacttttatcctaaatcatgcaactccataggtatttttagcgttttctagtgagaaatcatgtaaatcaacaaatcaagacatcacgtgaaa 19601964  T
Q  292 gatcgaggataagaaga-cgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaag 379  Q
    ||||||||||| || ||  ||| |  |||| | ||||| ||| | ||||||||||||| |||||| ||| ||||||||||| ||||||||    
T  19601965 gatcgaggatatgatgattgaaga--caatggttcttaaaaggtttttgaagacaataaaaagtggagaaaattcatttcatgttccaag 19602052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 205 - 380
Target Start/End: Complemental strand, 31859938 - 31859760
Alignment:
Q  205 ttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 302  Q
    |||||||||||||||||||||| ||||| ||||  ||||||||||| |||||||||||||| |||   ||||||||| | ||   |||||||||||||||    
T  31859938 ttttatcctaaatcatgcaactgcataggtgttttgagtctttttagtgagaaatcatgtaaatcagcaaaacaagacaccaggtgaaggatcgaggata 31859839  T
Q  303 agaagacgaaaattcaatgat-cttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
     ||| |   ||  |||||| | |||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  31859838 tgaatattgaagatcaatggttcttagaaggtatttgaagacaatacaaagtgaagaaaatttatttcaagttccaagg 31859760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 60 - 380
Target Start/End: Original strand, 29437401 - 29437716
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 159  Q
    |||||||  ||||||||||||| ||||| |  || ||||||||    || |||| ||||||||| |||||  || || ||| || ||||| ||||| |||    
T  29437401 tgatgatataataacatatgatgttttttgggttgtttttagttattttctttgtatttgaaggcaaattagaactcaattagatgagttgtcaatagtt 29437500  T
Q  160 tgaggaactttttgtattcttttt--aatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaa 255  Q
    ||||||| ||||||  || |||||  | |||| |  | |||||| | |||||||||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  29437501 tgaggaattttttgattttttttttcattcgagtattcgtaattcagttttatcctaaatcatgcaacttcatagctgttttgagtctttttaatgagaa 29437600  T
Q  256 atcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtga 355  Q
    |||||||| ||||  || |||||| |||||  ||||||||||||||| |||||   || |||||||         ||| || ||||||||||||||||||    
T  29437601 atcatgtaaatcggcaagacaagacatcacgtgaaggatcgaggatatgaagattgaagttcaatg---------gttcttagaagacaatacaaagtga 29437691  T
Q  356 agataattcatttcaagttccaagg 380  Q
    ||| | ||||||| |||||||||||    
T  29437692 agaaacttcatttgaagttccaagg 29437716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 151 - 380
Target Start/End: Original strand, 23353646 - 23353873
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccat-agt-tgttgagtcttttta 248  Q
    |||||||||| |||||||||||||||| |||| | |||| || |||||||| | ||||||  |||||| ||||  | ||| ||| | |||||||||||||    
T  23353646 tcaatggtttaaggaactttttgtattgttttcattcgagtcgttgtaattcaattttata-taaatcgtgcacattcatgagtgttttgagtcttttta 23353744  T
Q  249 atgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatac 348  Q
     |||||||||||||| ||||  ||||||||| |||||| |||||| | |||||| |||||  |||  |||||  |  |||||| | ||| ||||||||||    
T  23353745 gtgagaaatcatgtaaatcggcaaaacaagacatcacatgaagga-caaggatatgaagattaaagatcaatagt--tagaaggtcttttaagacaatac 23353841  T
Q  349 aaagtgaagataattcatttcaagttccaagg 380  Q
    |||||||||| |||||||||||||||||||||    
T  23353842 aaagtgaagaaaattcatttcaagttccaagg 23353873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 154 - 308
Target Start/End: Original strand, 10576479 - 10576635
Alignment:
Q  154 atggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatg 251  Q
    ||||||||| |||| ||||||||| |||| | |||| ||||||||||| |||||||| |||||| || ||||| ||||| ||  |||| ||||| || ||    
T  10576479 atggtttgaagaacattttgtattgttttcattcgagtcattgtaattcacttttattctaaattatacaacttcataggtgttttgattctttctagtg 10576578  T
Q  252 agaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    |||||| ||||| |||| |||||||||| ||||   ||||||||||||||| |||||    
T  10576579 agaaattatgtaaatcggaaaaacaagacatcatgtgaaggatcgaggatatgaaga 10576635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 110 - 399
Target Start/End: Original strand, 21077215 - 21077507
Alignment:
Q  110 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 209  Q
    |||||||||||||| |||||  |||||  || |||||||| ||||||||||||| ||| ||||||||| |||||| |||| || ||||| || | |||||    
T  21077215 tttgcatttgaaggcaaattagaagtcatttagaggagttgtcaatggtttgagaaaccttttgtattatttttattcgagtcgttgtagttcaatttta 21077314  T
Q  210 tcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaag 307  Q
    ||  |||||||  || ||||||| ||  ||  ||||||||| ||| |||||||||| || |  ||||||||| | ||   | |||||||| | || || |    
T  21077315 tcacaaatcatcaaattccataggtgtttttggtctttttagtgaaaaatcatgtaaattggcaaaacaagacaccaagtggaggatcgaagttatgagg 21077414  T
Q  308 acgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaat 399  Q
    |   ||  ||||| | ||||||||| || | |||||||||||||| |||| | ||||||||||||||||||||| ||| ||||||| ||||||    
T  21077415 attgaatatcaatggttcttagaaggtaatcgaagacaatacaaattgaataaaattcatttcaagttccaaggcattgaaagatggaagaat 21077507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 308
Target Start/End: Original strand, 9288224 - 9288392
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata--gttgttga 239  Q
    ||||||||||||||||||||||||||   ||||||| |||| | | || ||||| ||||| | ||||||| ||||||||| | |||||||   || || |    
T  9288224 gaggagttttcaatggtttgaggaacaaattgtattgttttcatttgagtcattataattcatttttatcataaatcatgtacctccatatgttttttta 9288323  T
Q  240 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    ||||||||| |||||||||||||| ||||  ||||||||| ||||   |||||||| |||||| |||||    
T  9288324 gtctttttagtgagaaatcatgtaaatcggcaaaacaagacatcaagtgaaggatcaaggatatgaaga 9288392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 279
Target Start/End: Original strand, 21167711 - 21167883
Alignment:
Q  110 tttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttactttta 209  Q
    |||||||||||||||||||   | |||  || |||||||| || ||| ||| |||||| ||||||||| |||| | |||| |  ||||||||||||||||    
T  21167711 tttgcatttgaaggaaaataagacgtcatttagaggagttgtccatgttttaaggaacattttgtattgttttcattcgagttgttgtaatttactttta 21167810  T
Q  210 tcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatc-gaaaaaacaaga 279  Q
    |||||||  ||| |||| ||||| ||  ||||| ||||||| |||||||||||||| ||| ||||||||||||    
T  21167811 tcctaaaatatgtaacttcataggtgttttgagactttttagtgagaaatcatgtaaatcggaaaaaacaaga 21167883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 376
Target Start/End: Complemental strand, 34864392 - 34864159
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgagt 241  Q
    |||||||| ||||||||||||||||| | |  |||| |||| | |||  ||||||||||| ||||||||||||||| ||| ||||||||   | ||||||    
T  34864392 gaggagttgtcaatggtttgaggaacgtatcatattgttttcactcg--tcattgtaattcacttttatcctaaattatgaaactccatgtgttttgagt 34864295  T
Q  242 ctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttga 339  Q
     |||| || |||||||||||||| ||||| ||| ||||| |||||  |||||||| | |||| | |||    || ||||| | ||||||||| | ||||     
T  34864294 gttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatggaga-ttgaagtcaatggttcttagaaggtttttgt 34864196  T
Q  340 agacaatacaaagtgaagataattcatttcaagttcc 376  Q
    |||||||||||| |||||| ||||||||| |||||||    
T  34864195 agacaatacaaaatgaagaaaattcatttaaagttcc 34864159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 194 - 376
Target Start/End: Original strand, 15192269 - 15192454
Alignment:
Q  194 ttgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaa 290  Q
    |||||||| |||||||||||| ||| |||| |||||||| ||||  |||| |||| || |||||||||||||| ||||| ||| ||||| |||||  |||    
T  15192269 ttgtaattcacttttatcctagatcgtgcagctccataggtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaaccaagacatcacgtgaa 15192368  T
Q  291 ggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||| |||||| |||   ||| |  |||| | ||||||||| |  ||||||||||| ||||||||||| |||||||||||||||||    
T  15192369 ggatcaaggatatgaaattgaaga-ccaatggttcttagaaggttgttgaagacaattcaaagtgaagacaattcatttcaagttcc 15192454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 60 - 259
Target Start/End: Original strand, 22119578 - 22119779
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttg-aggagttttcaatggt 158  Q
    ||||||| ||| | |||||||||||||  ||| | ||||||||    || |||||||||||||| |||||  |||| |||||  ||||||| ||||||||    
T  22119578 tgatgatagaacatcatatgatattttatgctatgtttttagttattttctttgcatttgaaggcaaattagaagt-tatttataggagttgtcaatggt 22119676  T
Q  159 ttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag--ttgttgagtctttttaatgagaaa 256  Q
    |||||||||   ||||| | ||||   |||| ||||||||||||||||||| || ||||||||||||| |||||   | ||||||||||||| |||||||    
T  22119677 ttgaggaacaaattgtaatgttttcgttcgagtcattgtaatttacttttacccaaaatcatgcaactacataggtattttgagtctttttagtgagaaa 22119776  T
Q  257 tca 259  Q
    |||    
T  22119777 tca 22119779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 1676396 - 1676301
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    |||||||| ||||||||||||||||| | ||||| | |||| | |||| |  |||||||| | |||||||||| ||||||||||||||||||||||    
T  1676396 gaggagttgtcaatggtttgaggaacatattgtaatgttttcattcgagtttttgtaattcaattttatcctatatcatgcaactccatagttgtt 1676301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 1682924 - 1682829
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    |||||||| ||||||||||||||||| | ||||| | |||| | |||| |  |||||||| | |||||||||| ||||||||||||||||||||||    
T  1682924 gaggagttgtcaatggtttgaggaacatattgtaatgttttcattcgagtttttgtaattcaattttatcctatatcatgcaactccatagttgtt 1682829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 295
Target Start/End: Complemental strand, 17339914 - 17339760
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 239  Q
    |||||||| || |||| ||||||||| ||||||||  |||| | || | || |||||||| | |||||||||||||||||||| | ||||| ||  ||||    
T  17339914 gaggagttatccatggattgaggaacattttgtatctttttcattctagtctttgtaattcaattttatcctaaatcatgcaatttcataggtgttttga 17339815  T
Q  240 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatc 295  Q
      ||||||| ||||| ||| |||| ||||| ||| |||||||||||| ||||||||    
T  17339814 agctttttagtgagagatcgtgta-atcgacaaagcaagatatcacatgaaggatc 17339760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 302
Target Start/End: Complemental strand, 25315332 - 25315169
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata--gttgttga 239  Q
    |||||||| |||||| |||||||||| | ||||||| |||| | | || || |||||||| | |||||||||| ||||||||||||||||  | | ||||    
T  25315332 gaggagttgtcaatgctttgaggaacatattgtattgttttcacttgagtcgttgtaattaagttttatcctagatcatgcaactccatatgggttttga 25315233  T
Q  240 gt-ctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 302  Q
    ||  ||| || |||| ||||||||| ||||| ||| ||||| ||| || |||||||| ||||||    
T  25315232 gtaatttgtagtgaggaatcatgtaaatcgacaaatcaagacatcgcatgaaggatcaaggata 25315169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 376
Target Start/End: Original strand, 27302796 - 27303028
Alignment:
Q  146 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagt-tgttgagtctt 244  Q
    |||| ||||||||||||||||| ||||||||| |||| | |||| ||||||||||| | || ||| ||| ||||||||||| ||| || | || ||| ||    
T  27302796 agttgtcaatggtttgaggaacattttgtattgttttcactcgagtcattgtaattcaattatatactagatcatgcaacttcatggtgtttttagtatt 27302895  T
Q  245 tt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagac 343  Q
    || || |||  ||||||||| ||||| |||  |||| |||||  | | |||| |||||| |||   ||| ||| |  | ||||||||| | |||||||||    
T  27302896 ttgtagtgatgaatcatgtaaatcgacaaattaagacatcacgtgcaagatcaaggatatgaaattgaacattaagggttcttagaaggtttttgaagac 27302995  T
Q  344 aatacaaagtgaagataattcatttcaagttcc 376  Q
    | || |||||||||| ||||||||| |||||||    
T  27302996 attataaagtgaagaaaattcattttaagttcc 27303028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 378
Target Start/End: Original strand, 13064465 - 13064679
Alignment:
Q  167 ctttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtag 264  Q
    |||||| |||| |||||| || ||||||  ||| | ||||||||  |||||||||||| |  |||| ||||  ||||| ||||| | ||||||||||||     
T  13064465 ctttttttattgtttttattcaattcataataaatcacttttattataaatcatgcaattttataggtgttttgagtcattttagtaagaaatcatgtaa 13064564  T
Q  265 atcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttgaagacaatacaaagtgaagataatt 363  Q
    || |  ||| ||||| |||||  |||||||| ||||||||| ||   || ||||||| | |||||| | |||||||||||||| ||||||||| | | ||    
T  13064565 attggcaaatcaagacatcacgtgaaggatcaaggataagacgattgaagttcaatggttcttagagggtatttgaagacaattcaaagtgaacaaattt 13064664  T
Q  364 catttcaagttccaa 378  Q
     ||||||||||||||    
T  13064665 gatttcaagttccaa 13064679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 9783084 - 9782994
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 232  Q
    |||||||| ||||| ||||||||||| | ||||||| |||| | || ||||||||||||| | ||||||  || |||||||||||||||||    
T  9783084 gaggagttgtcaatagtttgaggaacatattgtattgttttcactcaattcattgtaattcagttttattttagatcatgcaactccatag 9782994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 194 - 376
Target Start/End: Complemental strand, 17026745 - 17026560
Alignment:
Q  194 ttgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaa 290  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||  |||| |||| || | | |||||||||| ||||| |||  |||| |||||| |||    
T  17026745 ttgtaattcacttttatcctagatcatgcaactccataggtgttttgagtgttttgtagtcataaatcatgtaaatcgacaaattaagacatcacatgaa 17026646  T
Q  291 ggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||| || ||| ||  |   || || |  | ||||| ||  | |||||||||||||||||||||||| |||| ||||||||||||    
T  17026645 ggatcaagtatatgagaatttaagttaatggttcttaaaaagtttttgaagacaatacaaagtgaagaaaattaatttcaagttcc 17026560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 145 - 284
Target Start/End: Original strand, 26159773 - 26159914
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtc 242  Q
    ||||| ||||| |||| || ||| ||||||||| |||| | |||| || |||||||||| |||| |||||||| || ||||| ||||  ||||  |||||    
T  26159773 gagttgtcaatagtttaagaaacattttgtattgttttcattcgagtcgttgtaatttagttttgtcctaaattatccaacttcatatgtgttttgagtc 26159872  T
Q  243 tttttaatgagaaatcatgtagatcgaaaaaacaagatatca 284  Q
    |||||| ||| ||||||||||||||   ||||||||| ||||    
T  26159873 tttttagtgaaaaatcatgtagatcagcaaaacaagacatca 26159914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 46647214 - 46647354
Alignment:
Q  146 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgttgag-tctt 244  Q
    |||| |||||||||| | |||  ||||||||| |||| | || | ||  ||||||| |||||||||||||||||||||||||||||  ||||||| | ||    
T  46647214 agttgtcaatggtttcaagaatattttgtattgttttcattctagtcggtgtaattcacttttatcctaaatcatgcaactccataagtgttgagttatt 46647313  T
Q  245 tttaatgagaaatcatgtagatcgaaaaaacaagatatcac 285  Q
    ||||  |||||||||| || |||   ||||||||| |||||    
T  46647314 tttatcgagaaatcatataaatcagcaaaacaagacatcac 46647354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 205 - 380
Target Start/End: Original strand, 33519107 - 33519285
Alignment:
Q  205 ttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 302  Q
    ||||||| |||||||||||||| | ||| ||||  ||||||||||| |||||||||||||  ||||  ||| ||| | ||| |  |||| || |||||||    
T  33519107 ttttatcttaaatcatgcaacttcgtaggtgttttgagtctttttagtgagaaatcatgtgaatcggcaaatcaaaacatctcttgaagaattgaggata 33519206  T
Q  303 agaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
     || ||   ||  ||||| | ||||||||| | ||||||||||||||||  |||||| |||||||||||| ||||||||    
T  33519207 tgacgattgaagatcaatcgttcttagaaggtctttgaagacaatacaagttgaagaaaattcatttcaaattccaagg 33519285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 250 - 376
Target Start/End: Complemental strand, 47024755 - 47024629
Alignment:
Q  250 tgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatgat-cttagaagttatttgaagacaatac 348  Q
    |||||||||||||| ||||||||| ||||| ||| || |||||||| |||| | |||||   || | ||||| | |||||||| | |||||| ||| |||    
T  47024755 tgagaaatcatgtaaatcgaaaaatcaagacatcgcatgaaggatcaaggacatgaagattgaagt-caatggttcttagaaggtttttgaaaacagtac 47024657  T
Q  349 aaagtgaagataattcatttcaagttcc 376  Q
    |||||||||| |||| ||||||||||||    
T  47024656 aaagtgaagagaatttatttcaagttcc 47024629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 376
Target Start/End: Complemental strand, 1695935 - 1695710
Alignment:
Q  155 tggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatga 252  Q
    |||||| |||||| | |||||||  ||||| | || || |||||||| | |||||||||| ||||||||||||||||||| ||  |||  ||| || |||    
T  1695935 tggtttcaggaacatattgtattggttttatttgagtctttgtaattcaattttatcctagatcatgcaactccatagttattttgagggtttgtagtga 1695836  T
Q  253 g-aaatcatgtagatcgaaaaaa-caagatatcacacgaaggatcgaggataagaagacgaaaattcaatgatcttagaagttatttgaagacaatacaa 350  Q
    | |||||||| | ||| |||||| ||||| ||||   ||| |||| | |||| |||||   ||||  ||   ||||||||| |  |||||||||||||||    
T  1695835 ggaaatcatgaaaatcaaaaaaatcaagacatcatgtgaatgatcaacgatatgaagattgaaataaaacattcttagaaggttgttgaagacaatacaa 1695736  T
Q  351 agtgaagataattcatttcaagttcc 376  Q
    |||||| | |||||||||||||||||    
T  1695735 agtgaataaaattcatttcaagttcc 1695710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 10320291 - 10320225
Alignment:
Q  171 ttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    |||||||||||| | |||| || |||||||| |||||||||||| | ||||||||||||||| ||||    
T  10320291 ttgtattcttttcactcgagtcgttgtaattcacttttatcctagaccatgcaactccataggtgtt 10320225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 1673869 - 1673826
Alignment:
Q  194 ttgtaatttacttttatcctaaatcatgcaactccatagttgtt 237  Q
    |||||||| | |||||||||| ||||||||||||||||||||||    
T  1673869 ttgtaattcaattttatcctatatcatgcaactccatagttgtt 1673826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 12111433 - 12111360
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattcttttt-aatcgattcattgtaatttacttttatccta 214  Q
    |||||||| ||||||||||||||||| | ||||||| ||||| |  ||| || |||||||| ||||||||||||    
T  12111433 gaggagttgtcaatggtttgaggaacatattgtattttttttcacacgagtcgttgtaattcacttttatccta 12111360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 18444277 - 18444354
Alignment:
Q  155 tggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatag 232  Q
    |||||||||||||| |||||| | |||| | ||||  |  ||||||| | ||||||||||||||| ||||||||||||    
T  18444277 tggtttgaggaactctttgtaatgttttcattcgagccgctgtaattcagttttatcctaaatcacgcaactccatag 18444354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 18898192 - 18898233
Alignment:
Q  335 tttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    |||||| |||||||||||| |||| |||||||||||||||||    
T  18898192 tttgaatacaatacaaagtaaagaaaattcatttcaagttcc 18898233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 51884800 - 51884853
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  ||||| ||||||||||||||||| |||| ||||||||||||    
T  51884800 tcttagaagattgttgaatacaatacaaagtgaagaaaattaatttcaagttcc 51884853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 5906679 - 5906631
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaa 371  Q
    ||||||||| | |||||||| |||||||||| |||| ||||||||||||    
T  5906679 tcttagaaggtttttgaagataatacaaagttaagaaaattcatttcaa 5906631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 20044219 - 20044315
Alignment:
Q  169 ttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata-gt-tgttgagtctttttaatgagaaatcatgta 263  Q
    |||| |||| |||| | |||| ||||||||||| | |||  |||| ||||||||||||||||| || | ||||||||||||| ||| ||||||||||    
T  20044219 ttttatattgttttcattcgagtcattgtaattcaatttcttccttaatcatgcaactccatatgtattttgagtctttttattgaaaaatcatgta 20044315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 12033 - 12156
Alignment:
Q  59 ttgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggt 158  Q
    ||||| ||||| ||||||||||| | ||||||| | ||||||||||||||||||||||||||||| |||||  ||||||||| ||||| || ||||| ||    
T  12033 ttgataatggattaacatatgatgtctttagctatgtttttagtgtaattatttgcatttgaaggtaaattagaagtctattagaggaattgtcaatagt 12132  T
Q  159 ttgaggaactttttgtattctttt 182  Q
    ||||||||||||||||||| ||||    
T  12133 ttgaggaactttttgtattgtttt 12156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 212 - 415
Target Start/End: Original strand, 12328 - 12534
Alignment:
Q  212 ctaaatcatgcaactccatagttgtt--gagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaaga 308  Q
    ||||||||||||||||||||| ||||  |||| |||| || |||||||||||||| ||||| ||| ||||| |||||  ||||||| || |||| |||||    
T  12328 ctaaatcatgcaactccataggtgttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggattgacgatatgaaga 12427  T
Q  309 -cgaaaattcaatgatc-ttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaa 406  Q
     |||| |  ||||| |  ||||||||| | |||||| ||||||||||||||| |||| ||||||||||||||||  | | |||||| ||||| |||||||    
T  12428 tcgaaga--caatggttgttagaagttttatgaagaaaatacaaagtgaagaaaatttatttcaagttccaaggcgtcacaagatggaagaagggccgaa 12525  T
Q  407 aaagggtcg 415  Q
    |||||||||    
T  12526 aaagggtcg 12534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 60 - 373
Target Start/End: Complemental strand, 11880 - 11564
Alignment:
Q  60 tgatgatggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtt 159  Q
    ||||||| ||| | |||||||||||||  ||| | ||||||||    ||||||||||||||||| ||| |  |||||  || |||||||| |||||| ||    
T  11880 tgatgattgaacatcatatgatattttaggctatgtttttagttattttatttgcatttgaaggcaaaatagaagtcatttagaggagttgtcaatgatt 11781  T
Q  160 tgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaat 257  Q
    ||| |||||||||||||  |||| | | || || |||||||| | |||| ||||||||||||||||| ||| | ||  |||||||||||   |  |||||    
T  11780 tgatgaactttttgtatagttttcatttgaatcgttgtaattcagttttgtcctaaatcatgcaactacatgggtgttttgagtcttttccgtacgaaat 11681  T
Q  258 catgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaatga-tcttagaagttatttgaagacaatacaaagtgaa 356  Q
    |||||| ||||| ||||||||| ||||    |||||| ||| ||  |||||   ||  ||||||| ||||| ||| ||||||||||||||||||||||||    
T  11680 catgtaaatcgacaaaacaagacatcaagttaaggattgagaatttgaagattgaatatcaatgattcttataaggtatttgaagacaatacaaagtgaa 11581  T
Q  357 gataattcatttcaagt 373  Q
    || ||||||||||||||    
T  11580 gaaaattcatttcaagt 11564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 1604 - 1720
Alignment:
Q  66 tggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgagga 165  Q
    |||| ||||||||||| | ||||||| | ||||||||||||||||||||||||||||| |||||  ||||||||| ||||| || ||||| |||||||||    
T  1604 tggattaacatatgatgtctttagctatgtttttagtgtaattatttgcatttgaaggtaaattagaagtctattagaggaattgtcaatagtttgagga 1703  T
Q  166 actttttgtattctttt 182  Q
    |||||||||||| ||||    
T  1704 actttttgtattgtttt 1720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 415
Target Start/End: Original strand, 2008 - 2098
Alignment:
Q  325 ttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggtcg 415  Q
    ||||||||| | |||||| ||||||||||||||| |||| ||||||||||||||||  | | |||||| ||||| ||||||||||||||||    
T  2008 ttagaagttttatgaagaaaatacaaagtgaagaaaatttatttcaagttccaaggcgtcacaagatggaagaagggccgaaaaagggtcg 2098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 3e-28; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 24507761 - 24507645
Alignment:
Q  66 tggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgagga 165  Q
    |||| ||||||||||| | ||||||| | ||||||||||||||||||||||||||||| |||||  ||||||||| ||||| || ||||| |||||||||    
T  24507761 tggattaacatatgatgtctttagctatgtttttagtgtaattatttgcatttgaaggtaaattagaagtctattagaggaattgtcaatagtttgagga 24507662  T
Q  166 actttttgtattctttt 182  Q
    |||||||||||| ||||    
T  24507661 actttttgtattgtttt 24507645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 151 - 376
Target Start/End: Complemental strand, 17860540 - 17860312
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-t 247  Q
    ||||||||||||||||| ||||||||| |||| | |||| ||||||| ||||||||||||| |||||||||||||||||||  ||  |||||| |||| |    
T  17860540 tcaatggtttgaggaacattttgtattattttcactcgagtcattgtcatttacttttatcttaaatcatgcaactccatacgtgctttgagtgttttgt 17860441  T
Q  248 aatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaat 346  Q
    | ||||||||||||||  || | ||| || || |||||  |||||||  || ||||||| |   ||   |||| | ||||||||| | |||| |||||||    
T  17860440 agtgagaaatcatgtaattcaacaaatcaggacatcacgtgaaggataaagtataagaa-attgaaggacaatggttcttagaaggtttttgtagacaat 17860342  T
Q  347 acaaagtgaagataattcatttcaagttcc 376  Q
    |||||||||||| |||||||||||||||||    
T  17860341 acaaagtgaagaaaattcatttcaagttcc 17860312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 205 - 380
Target Start/End: Complemental strand, 26499884 - 26499706
Alignment:
Q  205 ttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggata 302  Q
    ||||||||||||||||| || | ||||| ||||  |||| |||||| |||||||||||| | ||||  ||||||||||| |||  ||| |||||||||||    
T  26499884 ttttatcctaaatcatgtaatttcataggtgttatgagtgtttttagtgagaaatcatgcaaatcggcaaaacaagataccacgtgaaagatcgaggata 26499785  T
Q  303 agaagacgaaaattcaatgat-cttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
     |||||   ||  |||||| | |||||||| | ||||||||||||||||||| |||| ||||||||||||||| |||||    
T  26499784 tgaagattgaagatcaatggttcttagaaggtttttgaagacaatacaaagtaaagaaaattcatttcaagtttcaagg 26499706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 194 - 279
Target Start/End: Complemental strand, 9943198 - 9943111
Alignment:
Q  194 ttgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaaga 279  Q
    |||||||| |||||||||||||||||||||||||||||| ||  || ||| |||||| |||||||||||||| |||| ||||||||||    
T  9943198 ttgtaattcacttttatcctaaatcatgcaactccataggtgtttttagtatttttattgagaaatcatgtaaatcggaaaaacaaga 9943111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 263
Target Start/End: Complemental strand, 26512878 - 26512755
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 239  Q
    |||||||| ||||||||||| | ||| ||||||||| |||| | ||||||| |||||||| ||||||| |||| |||||||||| | |||| ||  ||||    
T  26512878 gaggagttgtcaatggtttgtgtaacattttgtattgttttcattcgattcgttgtaattcacttttaacctagatcatgcaacccgatagctgttttga 26512779  T
Q  240 gtctttttaatgagaaatcatgta 263  Q
    |||||  || ||||||||||||||    
T  26512778 gtcttcctagtgagaaatcatgta 26512755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 263
Target Start/End: Complemental strand, 26517994 - 26517871
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 239  Q
    |||||||| ||||||||||| | ||| ||||||||| |||| | ||||||| |||||||| ||||||| |||| |||||||||| | |||| ||  ||||    
T  26517994 gaggagttgtcaatggtttgtgtaacattttgtattgttttcattcgattcgttgtaattcacttttaacctagatcatgcaacccgatagctgttttga 26517895  T
Q  240 gtctttttaatgagaaatcatgta 263  Q
    |||||  || ||||||||||||||    
T  26517894 gtcttcctagtgagaaatcatgta 26517871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 325 - 415
Target Start/End: Complemental strand, 24507357 - 24507267
Alignment:
Q  325 ttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggtcg 415  Q
    ||||||||| | |||||| ||||||||||||||| |||| ||||||||||||||||  | | |||||  ||||| ||||||||||||||||    
T  24507357 ttagaagttttatgaagaaaatacaaagtgaagaaaatttatttcaagttccaaggcgtcacaagatagaagaagggccgaaaaagggtcg 24507267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 15575122 - 15575175
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  15575122 tcttagaaggtcgttgaagacaatacaaagtgaagaaaattcatttcaagttcc 15575175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 350
Target Start/End: Complemental strand, 9396642 - 9396496
Alignment:
Q  206 tttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataa 303  Q
    ||||| ||||||||||||||| ||||  ||||  ||||||||||| ||||||||||| || ||||  ||||||||| |||||  |||||||| |||| ||    
T  9396642 tttattctaaatcatgcaacttcatatgtgttttgagtctttttagtgagaaatcat-taaatcggcaaaacaagacatcacgtgaaggatcaaggacaa 9396544  T
Q  304 gaagacgaaaattcaatga-tcttagaagttatttgaagacaatacaa 350  Q
    |||||   ||  |||| || |||||||| || ||||||||||||||||    
T  9396543 gaagaatgaagatcaacgattcttagaaattttttgaagacaatacaa 9396496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 284
Target Start/End: Original strand, 16439482 - 16439616
Alignment:
Q  151 tcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtcttttta 248  Q
    ||||| |||||||| ||  |||||||| |||||| | || || || ||||| ||||||||||||||| |||||||| || |  ||  |||||||||||||    
T  16439482 tcaatagtttgagggacaatttgtattgtttttatt-gagtcgttataattaacttttatcctaaataatgcaacttcacatgtgttttgagtcttttta 16439580  T
Q  249 atgagaaatcatgtagatcgaaaaaacaagatatca 284  Q
     |||||||||||||| |||  |||||||||| ||||    
T  16439581 gtgagaaatcatgtaaatcagaaaaacaagacatca 16439616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 286
Target Start/End: Complemental strand, 14768369 - 14768223
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttga 239  Q
    |||||||| ||| |||||||||||| ||||||||||  ||| | |||| | ||||||||| || ||||| ||||| ||||||| | ||||  ||  ||||    
T  14768369 gaggagttgtcattggtttgaggaattttttgtattggtttcattcgagttattgtaattcacatttattctaaaacatgcaatttcataaatgttttga 14768270  T
Q  240 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcaca 286  Q
    ||||||| |   |||||||||||| ||||  ||||||||| ||||||    
T  14768269 gtcttttcagatagaaatcatgtaaatcggcaaaacaagacatcaca 14768223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 265 - 375
Target Start/End: Original strand, 30355456 - 30355567
Alignment:
Q  265 atcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataatt 363  Q
    ||||| ||| |||||  ||||| ||||||||||||||| |||||   ||  ||||| | ||||||||| | ||||||||||||| |||||||| | ||||    
T  30355456 atcgacaaaccaagacctcacatgaaggatcgaggatatgaagattgaagatcaatcgttcttagaaggtttttgaagacaataaaaagtgaataaaatt 30355555  T
Q  364 catttcaagttc 375  Q
    ||||||||||||    
T  30355556 catttcaagttc 30355567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 301
Target Start/End: Complemental strand, 32930573 - 32930412
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 239  Q
    |||||||| ||||||||||| ||||| |||||| || |||  |   || || || ||||| ||||||||||| || ||||||| |  |||| ||||  ||    
T  32930573 gaggagttgtcaatggtttgcggaacattttgttttgtttccataagagtcgttttaattcacttttatccttaaacatgcaatttgatagatgttttga 32930474  T
Q  240 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggat 301  Q
    ||||||||| |||||||||||||| || |  ||||||||| |||||| | |||||| |||||    
T  32930473 gtctttttagtgagaaatcatgtaaattggcaaaacaagacatcacatggaggatcaaggat 32930412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 13759552 - 13759467
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactc 227  Q
    |||||||| ||||||||||||||||| | ||| ||| |||| | |||| || |||||||| | |||||| ||| ||||||||||||    
T  13759552 gaggagttgtcaatggtttgaggaacatattgaattgttttcactcgaatcgttgtaattcaattttattctatatcatgcaactc 13759467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 308
Target Start/End: Complemental strand, 12972433 - 12972317
Alignment:
Q  194 ttgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaag 291  Q
    |||||||| | || ||||||||||||||||||| ||||  ||  |||||||||||||  ||||||||||||| |||  |||| ||||| || ||  |||     
T  12972433 ttgtaattcagttgtatcctaaatcatgcaacttcatacgtgttttgagtctttttagggagaaatcatgtaaatcagaaaaccaagacataacgtgaaa 12972334  T
Q  292 gatcgaggataagaaga 308  Q
    |||||| |||| |||||    
T  12972333 gatcgatgatatgaaga 12972317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 15998708 - 15998761
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  ||| ||||||||||||||||||  |||||||||||||||||    
T  15998708 tcttagaaggttgttgtagacaatacaaagtgaagcaaattcatttcaagttcc 15998761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 20495890 - 20495806
Alignment:
Q  146 agttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 231  Q
    |||| ||||||||||||||||| ||||| ||| |||||| | || || |||||||| | ||||||| ||||| |||||||| ||||    
T  20495890 agttatcaatggtttgaggaacattttg-attgtttttatttgagtcgttgtaattcaattttatcttaaattatgcaacttcata 20495806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 326 - 422
Target Start/End: Complemental strand, 14768189 - 14768093
Alignment:
Q  326 tagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggtcgtaagctg 422  Q
    |||||| ||||||||||||||| |||| ||||| |||  |||| ||||| ||||| || | | |||| ||||| || ||||||||||| | ||||||    
T  14768189 tagaaggtatttgaagacaatagaaagcgaagaaaatagattttaagttacaaggcatcacaggatggaagaacggacgaaaaagggtggaaagctg 14768093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 22559250 - 22559176
Alignment:
Q  205 ttttatcctaaatcatgcaactccatagttgtt--gagtctttttaatgagaaatcatgtagatcgaaaaaacaag 278  Q
    |||| ||| ||||||||||||| ||||| ||||  | ||||||| | |||||||||||||| ||||||||||||||    
T  22559250 ttttttcccaaatcatgcaacttcataggtgttttgggtctttt-agtgagaaatcatgtaaatcgaaaaaacaag 22559176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 142 - 299
Target Start/End: Original strand, 1457 - 1616
Alignment:
Q  142 gaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--ga 239  Q
    |||||||| |||||  |||||||| | ||||||||| |||| | |||||||||| ||||| ||||||||| | ||||||||||||| | || ||||  ||    
T  1457 gaggagttgtcaatattttgaggagcattttgtattgttttcattcgattcattttaattcacttttatcattaatcatgcaactcaaaagatgtttcga 1556  T
Q  240 gtctttttaatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgagg 299  Q
    |||||||| |||| |||||||||| |||| ||||||| || |||||| ||| ||||||||    
T  1557 gtcttttttatgaaaaatcatgtaaatcggaaaaacatgaaatcacatgaaagatcgagg 1616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 2709 - 2754
Alignment:
Q  334 atttgaagacaatacaaagtgaagataattcatttcaagttccaag 379  Q
    |||||||||||||||| |||||||| || |||||||| ||||||||    
T  2709 atttgaagacaatacagagtgaagaaaactcatttcatgttccaag 2754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 156 - 374
Target Start/End: Original strand, 21425 - 21647
Alignment:
Q  156 ggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-taatga 252  Q
    |||||||||||||| ||||||| |||| | |||| || |||||||| |||||||||||||||||||||||| |||| |||  ||| || ||||  | |||    
T  21425 ggtttgaggaacttattgtattgttttcactcgagtcgttgtaattcacttttatcctaaatcatgcaacttcataattgttttgggtgttttgcagtga 21524  T
Q  253 gaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaa 351  Q
    | ||||||||| ||||| ||| ||||| || ||| |||||||| | |||| |||||   ||  ||||| | ||||||||| | ||| |||||||||||||    
T  21525 ggaatcatgtaaatcgacaaaccaagacattacatgaaggatcaatgatatgaagattgaagatcaatggttcttagaaggtttttaaagacaatacaaa 21624  T
Q  352 gtgaagataattcatttcaagtt 374  Q
    || ||||  ||||||||||||||    
T  21625 gttaagaatattcatttcaagtt 21647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 6213 - 6282
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatccta 214  Q
    ||||||||||||||||||||||| |  |||||| |||| | || | ||||||||||||||||||||||||    
T  6213 gagttttcaatggtttgaggaacataatgtattattttcactcaagtcattgtaatttacttttatccta 6282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 71 - 414
Target Start/End: Original strand, 58688 - 59038
Alignment:
Q  71 taacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgaggaacttt 170  Q
    ||||||||||| ||||||||| | ||||| ||    || | |||||||||||| |||||  ||||| ||  |||||||| ||||||||||||||||||||    
T  58688 taacatatgatgtttttagctatgtttttggttattttctatgcatttgaaggcaaattagaagtcaatcagaggagttgtcaatggtttgaggaacttt 58787  T
Q  171 ttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata-gttgttga-gtctttttaatgagaaatcatgtagatcg 268  Q
    ||||||| |||| | |||  ||||||||||  |  |||||||| |||||||||||||  || ||| || | ||||||||| |||||||||||||| || |    
T  58788 ttgtattgttttcattcgggtcattgtaatccaggtttatcctgaatcatgcaactctttatgtttttcaagtctttttagtgagaaatcatgtaaattg 58887  T
Q  269 aa-aaaacaagatatcacacgaaggatcgaggataagaagacgaaaattcaat-----gatcttagaagttatttgaagacaatacaaagtgaagataat 362  Q
       |||||| || |||||| ||||||||||| ||| |||||   || || |||     | ||||| ||  |||||||||||||| |||| |||||| |||    
T  58888 ggtaaaacaggacatcacatgaaggatcgagaatatgaagattgaagtttaatatatggttcttaaaatatatttgaagacaatgcaaaatgaaga-aat 58986  T
Q  363 tcatttcaagttccaagggattaaaagatgaaagaatggccgaaaaagggtc 414  Q
    |||||| ||||||||||| || | |||| ||||||| |   |||||||||||    
T  58987 tcatttaaagttccaaggtatcacaagacgaaagaacgcttgaaaaagggtc 59038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 132 - 379
Target Start/End: Complemental strand, 228295 - 228047
Alignment:
Q  132 aagtctatttgaggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactccata 231  Q
    ||||| ||| |||||||||||| || |||| ||||| ||||  ||| |||| | |||| || |||||||| | ||||||| ||||||||||||| | | |    
T  228295 aagtcaattagaggagttttcattgatttgtggaacattttaaattgttttcattcgagtcgttgtaattcatttttatcataaatcatgcaaccctaaa 228196  T
Q  232 gttgttgagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggatcgaggataagaagac-gaaaattcaatgat-cttag 328  Q
      |||||  | |||| || |||||||||||||| ||||| ||| ||||| |||||  |||||||||||  || ||| |  ||| |  ||||| | |||||    
T  228195 agtgttgtatgttttatagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcgagtgtatgaatattgaaga--caatggttcttag 228098  T
Q  329 aagttatttgaagacaatacaaagtgaagataattcatttcaagttccaag 379  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  228097 aaggtatttgaagacaatacaaagtgaagaaaattcatttcaagttccaag 228047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 375
Target Start/End: Complemental strand, 27007 - 26819
Alignment:
Q  191 tcattgtaatttacttttatcctaaatcatgcaactccatagttgtt--gagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacac 287  Q
    |||||||||||||||||||||||||||||| ||||| ||||| ||||  |||| |||  || |||||||||||||| ||||| |||  |||| |||||      
T  27007 tcattgtaatttacttttatcctaaatcatacaactacataggtgttttgagtgtttagtagtgagaaatcatgtaaatcgacaaattaagacatcacgt 26908  T
Q  288 gaaggatcgaggataagaagacgaaaattcaat-gatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttc 375  Q
    ||| |||| |||||| ||| |   || |||||| | ||||||||  |  ||||||||||||||||||||||| ||||| ||||||||||    
T  26907 gaaagatcaaggatatgaaaattgaagttcaatggttcttagaaagttcttgaagacaatacaaagtgaagaaaattcgtttcaagttc 26819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 378
Target Start/End: Original strand, 1997 - 2040
Alignment:
Q  335 tttgaagacaatacaaagtgaagataattcatttcaagttccaa 378  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  1997 tttgaagacaatacaaagtaaagaaaattcatttcaagttccaa 2040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 182
Target Start/End: Original strand, 1723 - 1839
Alignment:
Q  65 atggaataacatatgatatttttagctttatttttagtgtaattatttgcatttgaaggaaaattgaaagtctatttgaggagttttcaatggtttgagg 164  Q
    ||||||||||||||||| ||||   || | |||||||  ||||| |||||||||||||||| |||  ||||| |||  |||| || ||| |||||||| |    
T  1723 atggaataacatatgatgttttgc-ctatgtttttagcctaattctttgcatttgaaggaatattagaagtcaattataggatttgtcattggtttgaag 1821  T
Q  165 aactttttgtattctttt 182  Q
    ||| ||||||||| ||||    
T  1822 aaccttttgtattgtttt 1839  T

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Target: scaffold1026 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 1931 - 1850
Alignment:
Q  145 gagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaact 226  Q
    ||||| |||||| ||| ||||| |||||||||| |||| | || | |||||||||| || ||||||||||||| ||||||||    
T  1931 gagttgtcaatgatttaaggaaatttttgtattgttttcattctagtcattgtaatctagttttatcctaaattatgcaact 1850  T

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Target: scaffold0386 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 13116 - 13016
Alignment:
Q  198 aatttacttttatcctaaatcatgcaactccatagttg--ttgagtctttt-taatgagaaatcatgtagatcgaaaaaacaagatatcacacgaaggat 294  Q
    |||| ||||||||||||||| ||||||||||| || ||  |||||| |||| || |||| ||||||||| ||||| ||| ||||| |||||| |||||||    
T  13116 aattcacttttatcctaaattatgcaactccacaggtgttttgagtgttttgtagtgaggaatcatgtaaatcgacaaatcaagacatcacatgaaggat 13017  T
Q  295 c 295  Q
    |    
T  13016 c 13016  T

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Target: scaffold0836 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 2803 - 2863
Alignment:
Q  320 tgatcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttccaagg 380  Q
    |||||||||||   |||||| |||||||||||||||||| ||||||||| ||| |||||||    
T  2803 tgatcttagaatacatttgatgacaatacaaagtgaagaaaattcatttaaagatccaagg 2863  T

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Target: scaffold0282 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 376
Target Start/End: Complemental strand, 22527 - 22477
Alignment:
Q  326 tagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    |||||| | ||| |||||||||||| ||||||| |||||||||||||||||    
T  22527 tagaaggttttttaagacaatacaaggtgaagaaaattcatttcaagttcc 22477  T

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Target: scaffold0362 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 7817 - 7870
Alignment:
Q  323 tcttagaagttatttgaagacaatacaaagtgaagataattcatttcaagttcc 376  Q
    ||||||||| |  ||||||||| |||||||| |||| |||||||||||||||||    
T  7817 tcttagaaggttgttgaagacagtacaaagtcaagaaaattcatttcaagttcc 7870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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