View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8747_low_14 (Length: 247)
Name: NF8747_low_14
Description: NF8747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8747_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 68 - 229
Target Start/End: Original strand, 43633527 - 43633688
Alignment:
| Q |
68 |
gtcaaccatgtactaaattaaagtgtgcttttctagtttaatgtttaattcccatgtgttctaaacatgtggcatgagcacaagcatttcttttctatta |
167 |
Q |
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| T |
43633527 |
gtcaaccatgtactaaattaaagtgtgcttttctagtttaatgtttaattcccatgtgttctaaacatgtggcatgagcacaagcatttcttttctatta |
43633626 |
T |
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| Q |
168 |
ttcgaaaaaaggacacataagagtagaatgagatcatgaacttgaatggtgtgactcatttt |
229 |
Q |
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| T |
43633627 |
ttcgaaaaaaggacacataagagtggaatgagatcatgaacttgaatggtgtgactcatttt |
43633688 |
T |
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