View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8748_high_27 (Length: 206)
Name: NF8748_high_27
Description: NF8748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8748_high_27 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 194; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-106
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 46266614 - 46266819
Alignment:
| Q |
1 |
ataatatgtatatgatgtactatttttacaaccaatagattatgtgcatgaaaagtaagttatgaaagtgaataataaataaaaagatgttataattaac |
100 |
Q |
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| T |
46266614 |
ataatatgtatatgatgtactatttttacaaccaatagattatgtgcatgaaaagtaagttatgaaagtgaataataaataaaaagatgttataattaac |
46266713 |
T |
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| Q |
101 |
ctgagacaattcggcatttgtgttggtcatatctgtgatccaaaaatcacagaactatctgaaatgaatcaccagcggagcgtaaatcaaaacggcaatc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||| |
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| T |
46266714 |
ctgagacaattcggcatttgtgttggtcatatctgtgatccaaaaatcacagaactatctgaaatgattcaccagcggagcggaaatcaaaaccgcaatc |
46266813 |
T |
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| Q |
201 |
aatacc |
206 |
Q |
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|||||| |
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| T |
46266814 |
aatacc |
46266819 |
T |
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