View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8748_low_6 (Length: 432)

Name: NF8748_low_6
Description: NF8748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8748_low_6
NF8748_low_6
[»] chr2 (2 HSPs)
chr2 (100-416)||(24163854-24164170)
chr2 (1-45)||(24164225-24164269)
[»] chr5 (7 HSPs)
chr5 (228-416)||(1482063-1482251)
chr5 (233-416)||(1486545-1486728)
chr5 (247-416)||(1504866-1505035)
chr5 (237-416)||(1477878-1478057)
chr5 (228-416)||(1492041-1492226)
chr5 (247-416)||(1509012-1509182)
chr5 (227-411)||(1499109-1499293)
[»] chr7 (6 HSPs)
chr7 (225-416)||(5310264-5310455)
chr7 (227-416)||(5314980-5315169)
chr7 (225-416)||(5302363-5302554)
chr7 (247-416)||(46707052-46707221)
chr7 (225-416)||(5284175-5284366)
chr7 (225-416)||(5289761-5289952)
[»] chr1 (3 HSPs)
chr1 (247-416)||(44128463-44128632)
chr1 (247-416)||(44132668-44132837)
chr1 (247-416)||(44141090-44141259)
[»] chr3 (2 HSPs)
chr3 (247-399)||(37859445-37859597)
chr3 (247-396)||(37863474-37863623)


Alignment Details
Target: chr2 (Bit Score: 284; Significance: 1e-159; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 100 - 416
Target Start/End: Complemental strand, 24164170 - 24163854
Alignment:
Q  100 catgatcaagaggagatacatttcggtaataaaatacgcttttataactaatctgtgtaaagagatgcaagaaaaattaatcaaatcttagttatcttta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  24164170 catgatcaagaggagatacatttcggtaataaaatacgcttttataactaatctgtgtaaagagatgcaagaaaaatgaatcaaatctttgttatcttta 24164071  T
Q  200 gaataacacannnnnnngtacttacgtcatttctttataactattttaggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattt 299  Q
     |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24164070 taataacacatttttttgtacttacgtcatttctttataactattttaggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattt 24163971  T
Q  300 tgaaagagaatcctaacttgtgcacttatatggcaccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagc 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24163970 tgaaagagaatcctaacttgtgcacttatatggcaccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagc 24163871  T
Q  400 cgtgaaggctataaaag 416  Q
    |||||||||||||||||    
T  24163870 cgtgaaggctataaaag 24163854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24164269 - 24164225
Alignment:
Q  1 acacagcactaagatgagaaaatcaaactatgtcgcactcagacg 45  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  24164269 acaccgcactaagatgagaaaatcaaactatgtcgcactcagacg 24164225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 228 - 416
Target Start/End: Original strand, 1482063 - 1482251
Alignment:
Q  228 atttctttataactattttaggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcactta 327  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||||||||||| || || ||||||||||||||||| |||||||   | |||   ||    
T  1482063 atttctttataactacttcaggtgataaatctatgatcaagaggagatacatgtatcttactgaagagattttgaaagaaaatcctagtgtatgcgaata 1482162  T
Q  328 tatggcaccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
     ||||||||||| |||||| ||||||||||||||||||| |||||||  || ||||||||||||||||| || ||||||||||||||||    
T  1482163 catggcaccttcattggatgctaggcaagacatggtggtggtagaggtgcctagactaggaaaggaggctgcagtgaaggctataaaag 1482251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 233 - 416
Target Start/End: Original strand, 1486545 - 1486728
Alignment:
Q  233 tttataactattttaggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcacttatatgg 332  Q
    ||||||| || ||||||||| ||| | ||||||||||| ||||||||||||| ||| ||||  |||||||||||||||||||| || ||||||||||||     
T  1486545 tttataattactttaggtgaaaaatcaatgatcaagagaagatacatgtaccaaacagaagctattttgaaagagaatcctaatttttgcacttatatga 1486644  T
Q  333 caccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
    |||||||||||||| |||||||||||||||||||   ||| |  || || |||||||| ||||| || ||||| ||||||||||    
T  1486645 caccttctttggatgctaggcaagacatggtggtgcgagacgtgcctaggctaggaaatgaggctgcagtgaaagctataaaag 1486728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 247 - 416
Target Start/End: Original strand, 1504866 - 1505035
Alignment:
Q  247 aggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcacttatatggcaccttctttggat 346  Q
    |||||||||| ||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||| |   | ||    || ||||||||||| ||||||    
T  1504866 aggtgataaatctatgattaagagaagatacatgtacctaacagaggagattttaaaagagaatcccagtgtttgtgaatacatggcaccttcattggat 1504965  T
Q  347 actaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
     ||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||| || ||||||||||    
T  1504966 gctaggcaagacatggtggtggtagaggtacctagactaggaaaggaggctgccgtaaaagctataaaag 1505035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 237 - 416
Target Start/End: Original strand, 1477878 - 1478057
Alignment:
Q  237 taactattttaggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcacttatatggcacc 336  Q
    |||||| || |||||||||| | ||||||||||||||||||||||| || |||||||| ||||||||||| ||||| |   | ||    || ||||||||    
T  1477878 taactacttcaggtgataaatccatgatcaagaggagatacatgtatcttaccgaagaaattttgaaagaaaatccaagtgtatgtgaatacatggcacc 1477977  T
Q  337 ttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
     || |||||| ||||||| ||||||||||| ||||| | ||| ||||||||||||||||| || ||||| ||||||||||    
T  1477978 gtcattggatgctaggcaggacatggtggtggtagaagtacctagactaggaaaggaggctgcagtgaaagctataaaag 1478057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 416
Target Start/End: Original strand, 1492041 - 1492226
Alignment:
Q  228 atttctttataactattttaggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcactta 327  Q
    ||||||||||||||   | |||||| ||| | |||||||| || ||||||||||| ||||| || |||||||| ||||||||||||||  | ||    ||    
T  1492041 atttctttataact---tcaggtgacaaatccatgatcaaaagaagatacatgtatctaacagaggagattttaaaagagaatcctaatgtttgtgaata 1492137  T
Q  328 tatggcaccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
     ||||||||||| |||||| |||| |||||||||||||| ||||| | ||| |||||||| |||||||| || ||||||||||||||||    
T  1492138 catggcaccttcattggatgctagacaagacatggtggtggtagaagtacctagactagggaaggaggctgcagtgaaggctataaaag 1492226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 416
Target Start/End: Original strand, 1509012 - 1509182
Alignment:
Q  247 aggtgataaaactatgatc-aagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcacttatatggcaccttctttgga 345  Q
    |||||||||| | |||||| |||||||||||||||||  | || ||||||||||||||||||||||| ||  | ||  |||||| |||||| || |||||    
T  1509012 aggtgataaatcgatgatctaagaggagatacatgtatattacagaagagattttgaaagagaatcccaatgtttgtgcttatacggcaccatcattgga 1509111  T
Q  346 tactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
    | ||||||||||||||||||| ||| ||| ||| || |||||||| ||||  || ||||||||||||||||    
T  1509112 tgctaggcaagacatggtggttgtaaaggtacctaggctaggaaaagaggttgcagtgaaggctataaaag 1509182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 227 - 411
Target Start/End: Original strand, 1499109 - 1499293
Alignment:
Q  227 catttctttataactattttaggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcactt 326  Q
    |||||||||||||||  ||||||||||||| ||||||| | || |||| |  ||||| |||| ||||||||||||||||| ||||| || || |||        
T  1499109 catttctttataactcctttaggtgataaatctatgattaggaagagacatgtgtacttaacagaagagattttgaaagataatccaaatttttgcttcg 1499208  T
Q  327 atatggcaccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctat 411  Q
    ||| | |||||||||||||| |||||||||||||| |||  ||||||  ||| |||||||| |||||||| || |||||||||||    
T  1499209 ataagacaccttctttggatgctaggcaagacatgatggcggtagagatacctagactagggaaggaggctgcagtgaaggctat 1499293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 4e-42; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 225 - 416
Target Start/End: Original strand, 5310264 - 5310455
Alignment:
Q  225 gtcatttctttataactattttaggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcac 324  Q
    |||||||| ||||||| | || |||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||   | ||       
T  5310264 gtcatttcattataaccacttcaggtgataaatctatgatcaagaggagatacatgtatctaacagaggagattttgaaagaaaatcctagtgtttgtga 5310363  T
Q  325 ttatatggcaccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
     || ||||||||||| |||||| | ||||||||||||||||| ||||||| ||| ||||||||||||||||| || ||||||||||||||||    
T  5310364 atacatggcaccttcattggatgcaaggcaagacatggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaggctataaaag 5310455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 227 - 416
Target Start/End: Original strand, 5314980 - 5315169
Alignment:
Q  227 catttctttataactattttaggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcactt 326  Q
    |||||| ||||||||| || |||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||   | ||    |    
T  5314980 catttcattataactacttcaggtgataaatctatgatcaagaggagatacatgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaat 5315079  T
Q  327 atatggcaccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
    | ||||| ||||| |||||| ||||||||||||||||||| ||||||| ||| |||||||| |||||||| || ||||||||||||||||    
T  5315080 acatggccccttcattggatgctaggcaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaag 5315169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 225 - 416
Target Start/End: Original strand, 5302363 - 5302554
Alignment:
Q  225 gtcatttctttataactattttaggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcac 324  Q
    |||||| | ||||||||| || |||||||||| | ||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||   | ||       
T  5302363 gtcattccattataactacttcaggtgataaatccatgatcaagaggagatacatgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtga 5302462  T
Q  325 ttatatggcaccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
     || ||||| ||||| |||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||| || ||||||||||||||||    
T  5302463 atacatggccccttcattggatgctaggcaagacatggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaggctataaaag 5302554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 247 - 416
Target Start/End: Complemental strand, 46707221 - 46707052
Alignment:
Q  247 aggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcacttatatggcaccttctttggat 346  Q
    |||||||||| |||||||||||||||||||||||||||||||  | |||||||||||||||||||| |   | ||    |||||||||||||| ||||||    
T  46707221 aggtgataaatctatgatcaagaggagatacatgtacctaacataggagattttgaaagagaatcccagtgtttgtgaatatatggcaccttcattggat 46707122  T
Q  347 actaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
     | ||||||||||||||||| ||||||| ||| |||||||| |||||||| || ||||||||||||||||    
T  46707121 gccaggcaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaag 46707052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 225 - 416
Target Start/End: Original strand, 5284175 - 5284366
Alignment:
Q  225 gtcatttctttataactattttaggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcac 324  Q
    |||||||  ||||||||| || |||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||||||| | |||||||   | ||       
T  5284175 gtcattttattataactacttcaggtgataaatctatgatcaagaggagatacatgtatctaacagaagaaattttgaaaaaaaatcctagtgtttgtga 5284274  T
Q  325 ttatatggcaccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
     || ||||| ||||| |||||| | ||||||||||||||||| ||||||| ||| ||||||||||||||||| || ||||||||||||||||    
T  5284275 atacatggccccttcattggatgcaaggcaagacatggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaggctataaaag 5284366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 225 - 416
Target Start/End: Complemental strand, 5289952 - 5289761
Alignment:
Q  225 gtcatttctttataactattttaggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcac 324  Q
    |||||| | ||||||||| || |||||||||| | ||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||| |   | ||       
T  5289952 gtcattccattataactacttcaggtgataaatccatgatcaagaggagatacatgtatctaacagaagaaattttgaaagaaaatccaagtgtttgtga 5289853  T
Q  325 ttatatggcaccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
     || ||||| ||||| |||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||| || ||||||||||||||||    
T  5289852 atacatggccccttcattggatgctaggcaagacatggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaggctataaaag 5289761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 247 - 416
Target Start/End: Original strand, 44128463 - 44128632
Alignment:
Q  247 aggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcacttatatggcaccttctttggat 346  Q
    |||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||   | ||    || ||||||||||| ||||||    
T  44128463 aggtgataaatctatgatcaagaggagatatatgtacctaacagaggagattttgaaagagaatcctagtgtttgtgaatacatggcaccttcattggat 44128562  T
Q  347 actaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
     ||||||||||||||||||| ||||||| ||| |||||||| |||||||| || |||||||| |||||||    
T  44128563 gctaggcaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggccataaaag 44128632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 247 - 416
Target Start/End: Original strand, 44132668 - 44132837
Alignment:
Q  247 aggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcacttatatggcaccttctttggat 346  Q
    |||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||   | ||    || ||||||||||| ||||||    
T  44132668 aggtgataaatctatgatcaagaggagatatatgtacctaacagaggagattttgaaagagaatcctagtgtttgtgaatacatggcaccttcattggat 44132767  T
Q  347 actaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
     ||||||||||||||||||| ||||||| ||| |||||||| |||||||| || |||||||| |||||||    
T  44132768 gctaggcaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggccataaaag 44132837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 247 - 416
Target Start/End: Original strand, 44141090 - 44141259
Alignment:
Q  247 aggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcacttatatggcaccttctttggat 346  Q
    |||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||   | ||    || ||||||||||| ||||||    
T  44141090 aggtgataaatctatgatcaagaggagatatatgtacctaacagaggagattttgaaagagaatcctagtgtttgtgaatacatggcaccttcattggat 44141189  T
Q  347 actaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaag 416  Q
     ||||||||||||||||||| ||||||| ||| |||||||| |||||||| || |||||||| |||||||    
T  44141190 gctaggcaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggccataaaag 44141259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 247 - 399
Target Start/End: Complemental strand, 37859597 - 37859445
Alignment:
Q  247 aggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcacttatatggcaccttctttggat 346  Q
    |||||||||  | |||||||||| ||||||||||||| | || ||||||||  ||||||||||||| |   | |||   || ||||||||||| ||||||    
T  37859597 aggtgataagtcaatgatcaagaagagatacatgtacttgacagaagagatcctgaaagagaatccaagtgtatgcgagtacatggcaccttcattggat 37859498  T
Q  347 actaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagc 399  Q
     | || |||||||||||||| || |||| ||||||||||||||| ||||||||    
T  37859497 gcaagacaagacatggtggttgtggaggtaccaagactaggaaaagaggcagc 37859445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 396
Target Start/End: Complemental strand, 37863623 - 37863474
Alignment:
Q  247 aggtgataaaactatgatcaagaggagatacatgtacctaaccgaagagattttgaaagagaatcctaacttgtgcacttatatggcaccttctttggat 346  Q
    |||||||||| ||||||| |||| |||||||||| |  | || |||||||||||||| ||||||||||  || ||    |||||||||||||| ||||||    
T  37863623 aggtgataaatctatgattaagaagagatacatgcatttgactgaagagattttgaaggagaatcctagtttatgtgagtatatggcaccttcgttggat 37863524  T
Q  347 actaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggc 396  Q
     | || || || |||||||| || || | |||||  |||||||| |||||    
T  37863523 gcaagacaggatatggtggttgtggaagtaccaaagctaggaaaagaggc 37863474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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