View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8749_low_1 (Length: 654)
Name: NF8749_low_1
Description: NF8749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8749_low_1 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 620; Significance: 0; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 620; E-Value: 0
Query Start/End: Original strand, 1 - 644
Target Start/End: Complemental strand, 23588328 - 23587685
Alignment:
| Q |
1 |
ggtctccaaaccaagggagagaggagtaacatccagcaacaacagatcctgcactttctcattgccctcaccactcaaaatagcagcttggacggctgcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23588328 |
ggtctccaaaccaagggagagaggagtaacatccagcaacaacagatcctgcactttctcattgccctcaccactcaaaatagcagcttggacggctgcc |
23588229 |
T |
|
| Q |
101 |
ccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23588228 |
ccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatc |
23588129 |
T |
|
| Q |
201 |
caccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgtt |
300 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23588128 |
caccaacaagaacaacatcatggacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaacagatccatgtt |
23588029 |
T |
|
| Q |
301 |
gagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtc |
400 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23588028 |
gagctcttcaaaacgagcccgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtc |
23587929 |
T |
|
| Q |
401 |
ctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggt |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23587928 |
ctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggt |
23587829 |
T |
|
| Q |
501 |
tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtgaaacatc |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
23587828 |
tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttgacctcaaagataccttcctcaatagtaagtagggaaacatc |
23587729 |
T |
|
| Q |
601 |
aaaagttccaccaccaagatcgaaaataagaacgttcttctcac |
644 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23587728 |
aaaagttccaccaccaagatcgaaaataagaacgttcttctcac |
23587685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 523; E-Value: 0
Query Start/End: Original strand, 2 - 644
Target Start/End: Complemental strand, 23597179 - 23596537
Alignment:
| Q |
2 |
gtctccaaaccaagggagagaggagtaacatccagcaacaacagatcctgcactttctcattgccctcaccactcaaaatagcagcttggacggctgccc |
101 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| || || |||||||||||||||||||| || || | |
|
|
| T |
23597179 |
gtctccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttggactgcagcgc |
23597080 |
T |
|
| Q |
102 |
catatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatcc |
201 |
Q |
| |
|
|||| |||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
23597079 |
cataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatcc |
23596980 |
T |
|
| Q |
202 |
accaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgttg |
301 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
23596979 |
gccaacaagaacaacatcatcaacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagatccatgttg |
23596880 |
T |
|
| Q |
302 |
agctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcc |
401 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
23596879 |
agctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcc |
23596780 |
T |
|
| Q |
402 |
tcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggtt |
501 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596779 |
tcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggtt |
23596680 |
T |
|
| Q |
502 |
caccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtgaaacatca |
601 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
23596679 |
caccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatca |
23596580 |
T |
|
| Q |
602 |
aaagttccaccaccaagatcgaaaataagaacgttcttctcac |
644 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596579 |
aaagttccaccaccaagatcgaaaataagaacgttcttctcac |
23596537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 20 - 638
Target Start/End: Original strand, 54396015 - 54396633
Alignment:
| Q |
20 |
agaggagtaacatccagcaacaacagatcctgcactttctcattgccctcaccactcaaaatagcagcttggacggctgccccatatgcaacagcttcat |
119 |
Q |
| |
|
|||||||||||||| ||||||| ||||| || || || |||| || ||||| |||||||| || ||||| || || || ||||| ||||||||||||| |
|
|
| T |
54396015 |
agaggagtaacatcaagcaacagaagatcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcat |
54396114 |
T |
|
| Q |
120 |
cggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtc |
219 |
Q |
| |
|
| ||||| || ||||| |||||||| || |||||||||||||| |||||||| |||||||| || |||||||| || |||||||||||||||||||| || |
|
|
| T |
54396115 |
cagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaacaacttc |
54396214 |
T |
|
| Q |
220 |
atggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgttgagctcttcaaaacgagca |
319 |
Q |
| |
|
||| ||| ||||||| |||||||||||||| | |||||||||||||| |||||||| |||||||||| |||||| || | |||||||| | || |
|
|
| T |
54396215 |
atgaacatgactcttatcaatcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaatccatattcaattcttcaaatctcgcc |
54396314 |
T |
|
| Q |
320 |
cgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctcttagctctctcgcaag |
419 |
Q |
| |
|
| || || || | || || ||||| || |||||||| ||||||||||| || || || |||||||| || ||||| || |||||||||||||| |||| |
|
|
| T |
54396315 |
cttgtaatagttgcatagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagtgttctcttagctctctcacaag |
54396414 |
T |
|
| Q |
420 |
cagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaa |
519 |
Q |
| |
|
| ||||| ||||| || | ||| |||| ||| |||||||||||||||||||| |||||| | || || ||||||||| |||||||| ||||||||||| |
|
|
| T |
54396415 |
ctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaacaaaatgattcaccattctgttatcaaa |
54396514 |
T |
|
| Q |
520 |
atcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtgaaacatcaaaagttccaccaccaaga |
619 |
Q |
| |
|
||||||||| || | ||| ||||||||||| ||||||||||| || ||||| ||||||||||||||||| || |||||||| ||||||||||| || | |
|
|
| T |
54396515 |
atcttcaccaccaagatgagtatcaccagcagtagctttcacttcgaagatcccttcttcaatagtaagaagagaaacatcgaaagttccacctcccaag |
54396614 |
T |
|
| Q |
620 |
tcgaaaataagaacgttct |
638 |
Q |
| |
|
|| |||||||| ||||||| |
|
|
| T |
54396615 |
tcaaaaataagcacgttct |
54396633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 249
Target Start/End: Original strand, 35132101 - 35132278
Alignment:
| Q |
73 |
actcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagt |
172 |
Q |
| |
|
|||||| | |||||| || || ||||||||||| || ||||| ||||||||||| |||||||| || | |||||| || ||||| || | |||||| || |
|
|
| T |
35132101 |
actcaacaaagcagcctgaactgctgccccataagctacagcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagc |
35132200 |
T |
|
| Q |
173 |
tgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacac-tgttcttatccatcttagcatc |
249 |
Q |
| |
|
|| || || ||||||||||||| || || |||||||||||||| |||| || | || |||| |||||||||||||| |
|
|
| T |
35132201 |
tgctgcactttgggaatcctagaagaccctccaacaagaacaacatcatctacccttgctcttgtccatcttagcatc |
35132278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 624
Target Start/End: Original strand, 35132600 - 35132644
Alignment:
| Q |
580 |
aatagtaagtagtgaaacatcaaaagttccaccaccaagatcgaa |
624 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
35132600 |
aatagtaagtattgaaacatcaaaagtgccaccaccaagatcgaa |
35132644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 9336415 - 9336358
Alignment:
| Q |
72 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgat |
129 |
Q |
| |
|
||||||||||||||||||| || ||||| ||||| |||||||| ||||| |||||||| |
|
|
| T |
9336415 |
cactcaaaatagcagcttgaacagctgcaccataagcaacagcctcatctgggttgat |
9336358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 215
Target Start/End: Original strand, 30774896 - 30775039
Alignment:
| Q |
72 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaag |
171 |
Q |
| |
|
||||||| | |||||| ||||| |||||||| | ||||| || ||||| || ||||||||||| || | ||||| ||||||||||||| |||| || |
|
|
| T |
30774896 |
cactcaatagagcagcctggacagctgccccgtgagcaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatag |
30774995 |
T |
|
| Q |
172 |
ttgttgaaccttgggaatcctagtggatccaccaacaagaacaa |
215 |
Q |
| |
|
|| || || ||||||||||||| || ||||| |||||||||| |
|
|
| T |
30774996 |
ttcctgcactttgggaatcctagaagaaccaccgacaagaacaa |
30775039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 245; Significance: 1e-135; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 56 - 644
Target Start/End: Original strand, 8102295 - 8102883
Alignment:
| Q |
56 |
ttctcattgccctcaccactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattga |
155 |
Q |
| |
|
|||||||| || ||||||||||| ||||||||||| || || || ||||| |||||||| || |||||||||||||| || || |||||||| ||||||| |
|
|
| T |
8102295 |
ttctcatttccttcaccactcaagatagcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattga |
8102394 |
T |
|
| Q |
156 |
agaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaa |
255 |
Q |
| |
|
|||| |||||||| ||||| ||||| |||||||||||||| || ||||||||||||||||| ||||| || || |||| |||||||||||||| ||||| |
|
|
| T |
8102395 |
agaagtcttgcaacagttgctgaactttgggaatcctagttgaaccaccaacaagaacaacatcatgaactgtgctcttgtccatcttagcatctctcaa |
8102494 |
T |
|
| Q |
256 |
gcacttctcaacaggctccatacacttcctaaacagatccatgttgagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaac |
355 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| || || ||||| | ||||| ||||| || |||||||| |||| |||||||||| |
|
|
| T |
8102495 |
acacttctcaacaggctccatacacttcctgaacagatccatgttaagttcctcaaatctggcacgggtgattgtggtgtaaaaatcaacaccctcaaac |
8102594 |
T |
|
| Q |
356 |
aatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccac |
455 |
Q |
| |
|
|| |||||||| |||||||| ||||| || || || || || || ||||| |||||||| || || ||||||||||| ||||| ||||| || ||||| | |
|
|
| T |
8102595 |
aaagaatcaatctcaatggtagtttgtgcggttgatgagagagttctcttcgctctctcacatgcggttctcaatctcctaagtgccctagggtttccgc |
8102694 |
T |
|
| Q |
456 |
taatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagc |
555 |
Q |
| |
|
||||||||||||| ||||||||||| || ||||||||||||||| | ||||| |||||||||||||||||||| || | ||| |||||||| || ||||| |
|
|
| T |
8102695 |
taatatccttcttgttcttcctcttaaactcttgaacaaaatgggtaaccattctgttatcaaaatcttcaccaccaagatgggtatcacctgcagtagc |
8102794 |
T |
|
| Q |
556 |
tttcacctcaaagataccttcttcaatagtaagtagtgaaacatcaaaagttccaccaccaagatcgaaaataagaacgttcttctcac |
644 |
Q |
| |
|
|| || ||||| ||||| |||||||||||||| ||||| ||||||||||| |||||||| | ||| || || | ||||||||||||| |
|
|
| T |
8102795 |
cttaacttcaaatataccctcttcaatagtaagaagtgacacatcaaaagtaccaccacccaaatcaaagatcaacacgttcttctcac |
8102883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 59 - 612
Target Start/End: Complemental strand, 8017950 - 8017397
Alignment:
| Q |
59 |
tcattgccctcaccactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaaga |
158 |
Q |
| |
|
|||||||| |||||||||||||| || ||||| || || || ||||| |||||||| || || |||||||| ||||| |||||||| || |||||||||| |
|
|
| T |
8017950 |
tcattgccttcaccactcaaaattgctgcttgtacagcggcaccataagcaacagcctcgtctgggttgatactcttgcaaagctctttaccattgaaga |
8017851 |
T |
|
| Q |
159 |
aatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagca |
258 |
Q |
| |
|
|||||||||| ||||| ||||| |||||||| ||||| || || |||||||||||||| ||||| ||| |||||| |||||||||||||| ||||| || |
|
|
| T |
8017850 |
aatcttgcaacagttgctgaactttgggaattctagttgaaccgccaacaagaacaacatcatgaacagagttcttgtccatcttagcatctctcaaaca |
8017751 |
T |
|
| Q |
259 |
cttctcaacaggctccatacacttcctaaacagatccatgttgagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaat |
358 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||||| || || ||||| | ||||| ||||| || |||||||| |||| |||||||||||| |
|
|
| T |
8017750 |
cttctcaacaggctccatacactttctgaacagatccatgttaagttcctcaaatcttgcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaa |
8017651 |
T |
|
| Q |
359 |
gaatcaatttcaatggtggtttgagcagtagaggaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaa |
458 |
Q |
| |
|
|||||||| |||||||| ||||| |||||||| || || || ||||| |||||||| ||||| || ||||| || ||||| || || || |||||||||| |
|
|
| T |
8017650 |
gaatcaatctcaatggtagtttgtgcagtagaagagagagttctcttcgctctctcacaagctgtcctcaacctcctaagtgctctagggtttccactaa |
8017551 |
T |
|
| Q |
459 |
tatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagcttt |
558 |
Q |
| |
|
|||||||||| ||||||||||| || || ||||||||||| || ||||| ||||| |||||||||||||| || | ||| ||||||||||| ||||| || |
|
|
| T |
8017550 |
tatccttcttgttcttcctcttaaactcctgaacaaaatgattaaccattctgttgtcaaaatcttcaccaccaagatgggtatcaccagcagtagcctt |
8017451 |
T |
|
| Q |
559 |
cacctcaaagataccttcttcaatagtaagtagtgaaacatcaaaagttccacc |
612 |
Q |
| |
|
|| ||||| ||||| |||||||||||||| || || ||||||||||| ||||| |
|
|
| T |
8017450 |
aacttcaaaaataccctcttcaatagtaagaagagacacatcaaaagtaccacc |
8017397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 2 - 618
Target Start/End: Original strand, 39985220 - 39985836
Alignment:
| Q |
2 |
gtctccaaaccaagggagagaggagtaacatccagcaacaacagatcctgcactttctcattgccctcaccactcaaaatagcagcttggacggctgccc |
101 |
Q |
| |
|
|||||||||||||| || ||||| || ||||||| | | |||||||| || ||||||||||||||||||||||| |||||||| || || || || | |
|
|
| T |
39985220 |
gtctccaaaccaagagatagaggggtgacatccaaaaggagaagatcctgaaccttctcattgccctcaccactcaagatagcagcctgaacagcagcac |
39985319 |
T |
|
| Q |
102 |
catatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatcc |
201 |
Q |
| |
|
||||||||||||| ||||| || || |||||||| || ||||||||||| || ||||||||||||||||||||||||||||| ||||| || || || || |
|
|
| T |
39985320 |
catatgcaacagcctcatcaggatttatgctcttgcatagctcctttccgttaaagaaatcttgcaaaagttgttgaacctttggaattctggtagaacc |
39985419 |
T |
|
| Q |
202 |
accaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgttg |
301 |
Q |
| |
|
|| ||||| ||||| || |||||||| ||||| |||||||| ||||| ||||| || |||||||| ||||||||||| || ||||| |||||||||||| |
|
|
| T |
39985420 |
tcctacaaggacaacatcgtggacacttttcttgtccatcttggcatctctcaaacatttctcaactggctccatacattttctaaagagatccatgttg |
39985519 |
T |
|
| Q |
302 |
agctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcc |
401 |
Q |
| |
|
||||| ||||| | |||||||| |||| | ||| || ||||| || ||||| | |||||||||||||||||||| || |||||||| || || || | |
|
|
| T |
39985520 |
agctcctcaaatcttgcacgagtaatgggggagtagaaatcaattccttcaaaaagagaatcaatttcaatggtggtctgggcagtagaagagagagttc |
39985619 |
T |
|
| Q |
402 |
tcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggtt |
501 |
Q |
| |
|
|||| ||||| || |||||||| ||||| || |||||||| || || || ||||| || |||||||| ||||| |||||||| ||||||||||| ||||| |
|
|
| T |
39985620 |
tcttcgctctttcacaagcagtcctcaacctcctaagagctctggggttgccactgatgtccttcttgttctttctcttgaactcttgaacaaagtggtt |
39985719 |
T |
|
| Q |
502 |
caccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtgaaacatca |
601 |
Q |
| |
|
|||||| ||||| |||||||| |||||||| | ||| || || || ||||| |||||||||||||||||||| ||||||||||| || | || |||||| |
|
|
| T |
39985720 |
caccattctgttgtcaaaatcctcacctccaagatgggtgtctccggctgtggctttcacctcaaagataccctcttcaatagttagcaaagagacatca |
39985819 |
T |
|
| Q |
602 |
aaagttccaccaccaag |
618 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
39985820 |
aaagtaccaccaccaag |
39985836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 392 - 531
Target Start/End: Complemental strand, 8383080 - 8382941
Alignment:
| Q |
392 |
gaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaa |
491 |
Q |
| |
|
||||| ||||| || || ||||||||||| ||||| || |||||||||||| |||| || |||||||| ||||| |||| |||||||||||| || | || |
|
|
| T |
8383080 |
gaaagtgtcctttttgccctctcgcaagccgttcttaaccttctaagagcctttgggttcccactaatgtccttattatgcttcctcttgaactcgtcaa |
8382981 |
T |
|
| Q |
492 |
caaaatggttcaccatcctgttatcaaaatcttcacctcc |
531 |
Q |
| |
|
|||| | ||||| || |||||||| || ||||||||||| |
|
|
| T |
8382980 |
caaagtacttcacgattctgttatctaagtcttcacctcc |
8382941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 17259914 - 17260034
Alignment:
| Q |
101 |
ccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatc |
200 |
Q |
| |
|
||||| |||||||| ||||| |||||||||||||| || | ||||| || ||||||||||| ||||| ||||| || || || |||||||||| |||| |
|
|
| T |
17259914 |
ccataagcaacagcctcatcagggttgatgctcttgcataattccttacccttgaagaaatcctgcaatagttgctgcactttcggaatcctagaagatc |
17260013 |
T |
|
| Q |
201 |
caccaacaagaacaacgtcat |
221 |
Q |
| |
|
|||||||||| ||||| |||| |
|
|
| T |
17260014 |
caccaacaaggacaacatcat |
17260034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 82 - 248
Target Start/End: Original strand, 8590292 - 8590458
Alignment:
| Q |
82 |
agcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaacc |
181 |
Q |
| |
|
||||||||| || ||||| ||||| |||||||| ||||| || |||||||| || |||| ||||| || | || || |||||||| || || || || |
|
|
| T |
8590292 |
agcagcttgaacagctgcaccataagcaacagcctcatctggattgatgctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcact |
8590391 |
T |
|
| Q |
182 |
ttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcat |
248 |
Q |
| |
|
||||||||||||| || ||||||||||| ||||| |||| ||| ||||||| ||||||||||||| |
|
|
| T |
8590392 |
ttgggaatcctagaagaaccaccaacaagtacaacatcatctacaatgttcttgtccatcttagcat |
8590458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 249
Target Start/End: Complemental strand, 7878247 - 7878080
Alignment:
| Q |
82 |
agcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaacc |
181 |
Q |
| |
|
|||||| || || ||||| ||||| |||||||||||||| ||||||||||| | |||| ||||| || || || || || ||||| || || || || |
|
|
| T |
7878247 |
agcagcctgaacagctgcaccataagcaacagcttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcact |
7878148 |
T |
|
| Q |
182 |
ttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatc |
249 |
Q |
| |
|
||| ||||||||| |||||||||||||| ||||| |||| ||| ||||||| |||||| ||||||| |
|
|
| T |
7878147 |
ttgagaatcctagatgatccaccaacaagtacaacatcatctacattgttcttgtccatcatagcatc |
7878080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 72 - 249
Target Start/End: Original strand, 8575970 - 8576147
Alignment:
| Q |
72 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaag |
171 |
Q |
| |
|
||||||| | |||||||||||| | || ||||| |||||||| ||||| ||||||||||||||||| | ||||| || ||||| | || || || || |
|
|
| T |
8575970 |
cactcaacaaagcagcttggacaacagcaccataagcaacagcctcatcagggttgatgctcttacataattccttccccttgaaaacctcctgtaatag |
8576069 |
T |
|
| Q |
172 |
ttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatc |
249 |
Q |
| |
|
||| || || |||||||||| || ||||||||||| ||||| |||| ||||| ||||| |||||||||||||| |
|
|
| T |
8576070 |
ctgtctcactttaggaatcctagaagaaccaccaacaaggacaacatcatctacactattcttgtccatcttagcatc |
8576147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 533
Target Start/End: Original strand, 8581664 - 8581805
Alignment:
| Q |
392 |
gaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaa |
491 |
Q |
| |
|
||||| ||||| || |||||||| |||||||| ||||| ||||||| || ||||||||||| |||| |||| |||| || |||||||| || | |
|
|
| T |
8581664 |
gaaagtgtccttttcgctctctcacaagcagtcctcaaccttctaatggcttttggatttccaataatctcctctttatgttttctcttgaactccgaca |
8581763 |
T |
|
| Q |
492 |
caaaatggttcaccatcctgttatcaaaatcttcacctccca |
533 |
Q |
| |
|
|||| || |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
8581764 |
caaagtgattcaccattctgttatcaaaatcttcccctccca |
8581805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 246
Target Start/End: Original strand, 6789166 - 6789330
Alignment:
| Q |
82 |
agcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaacc |
181 |
Q |
| |
|
|||||| ||||| ||||| || || |||||||| ||||| |||||||||||| | || | |||||||| |||| | |||||||| |||||||| || |
|
|
| T |
6789166 |
agcagcctggacagctgcaccgtaagcaacagcctcatcagggttgatgctcatgcacaaatcctttcccatgaaaacttcttgcaatagttgttgcact |
6789265 |
T |
|
| Q |
182 |
ttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagc |
246 |
Q |
| |
|
|||||||| |||| || ||||||||||| ||||| |||| ||| | |||| ||||||||||| |
|
|
| T |
6789266 |
ttgggaattctagaagacccaccaacaaggacaacatcatttacaatactcttgtccatcttagc |
6789330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 8636856 - 8636718
Alignment:
| Q |
83 |
gcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaacct |
182 |
Q |
| |
|
||||| ||||| ||||| ||||| |||||||| ||||| | ||||||||||||||| || ||||| | || || | || || || ||||| || |||| |
|
|
| T |
8636856 |
gcagcctggactgctgctccataagcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgctgcacct |
8636757 |
T |
|
| Q |
183 |
tgggaatcctagtggatccaccaacaagaacaacgtcat |
221 |
Q |
| |
|
| |||||||||| ||| ||||||||||| ||||| |||| |
|
|
| T |
8636756 |
ttggaatcctagaggagccaccaacaaggacaacatcat |
8636718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 281
Target Start/End: Original strand, 17267612 - 17267792
Alignment:
| Q |
101 |
ccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatc |
200 |
Q |
| |
|
||||| |||||||| ||||| |||||||| || || || | ||||| || |||||||| | ||||| ||||| || || || |||||||||| || | |
|
|
| T |
17267612 |
ccataagcaacagcctcatcagggttgatacttttgcataattccttccccttgaagaagttctgcaatagttgctgcactttcggaatcctagaagacc |
17267711 |
T |
|
| Q |
201 |
caccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacact |
281 |
Q |
| |
|
|||||||||| ||||| |||| || ||| |||| || ||||||||||| || | |||||||||||| |||||| |||| |
|
|
| T |
17267712 |
caccaacaaggacaacatcatcaactctgctcttgtcaatcttagcatcactaagacacttctcaacaatctccatgcact |
17267792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 8609571 - 8609710
Alignment:
| Q |
82 |
agcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaacc |
181 |
Q |
| |
|
|||||| ||||| || || ||||| ||||| || ||||| |||||||||||| |||| | |||||||||||||| || ||||||| || || | || |
|
|
| T |
8609571 |
agcagcctggacagcagcaccataagcaaccgcctcatcagggttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcact |
8609670 |
T |
|
| Q |
182 |
ttgggaatcctagtggatccaccaacaagaacaacgtcat |
221 |
Q |
| |
|
|| |||||||||| || || |||||||||||||| |||| |
|
|
| T |
8609671 |
ttcggaatcctagaagaacctccaacaagaacaacatcat |
8609710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 519
Target Start/End: Complemental strand, 7877931 - 7877810
Alignment:
| Q |
398 |
gtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaat |
497 |
Q |
| |
|
||||| ||||| ||||| || ||||||||||| || ||||| ||||| || ||||||| ||| ||| |||||||||||||| || || || |||| |
|
|
| T |
7877931 |
gtccttttagccctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcctcttaaactccatcactaaat |
7877832 |
T |
|
| Q |
498 |
ggttcaccatcctgttatcaaa |
519 |
Q |
| |
|
|||||| ||| ||||||||||| |
|
|
| T |
7877831 |
ggttcaacattctgttatcaaa |
7877810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 10494898 - 10494841
Alignment:
| Q |
72 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgat |
129 |
Q |
| |
|
|||||||||||||||| || || ||||| ||||| |||||||| ||||| |||||||| |
|
|
| T |
10494898 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
10494841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 13333892 - 13333835
Alignment:
| Q |
72 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgat |
129 |
Q |
| |
|
|||||||||||||||| || || ||||| ||||| |||||||| ||||| |||||||| |
|
|
| T |
13333892 |
cactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
13333835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 8570068 - 8570132
Alignment:
| Q |
185 |
ggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatc |
249 |
Q |
| |
|
|||||||||| || ||||||||||| ||||| |||| ||||| ||||| |||||||||||||| |
|
|
| T |
8570068 |
ggaatcctagaagaaccaccaacaaggacaacatcatctacactattcttttccatcttagcatc |
8570132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 593 - 621
Target Start/End: Original strand, 8602139 - 8602167
Alignment:
| Q |
593 |
gaaacatcaaaagttccaccaccaagatc |
621 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
8602139 |
gaaacatcaaaagttccaccaccaagatc |
8602167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 134; Significance: 2e-69; HSPs: 14)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 101 - 618
Target Start/End: Complemental strand, 17717182 - 17716665
Alignment:
| Q |
101 |
ccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatc |
200 |
Q |
| |
|
|||||||||||||| |||||||| || |||||||| || |||||||||| || |||||||| ||||| |||||||||||||| ||||| || || || | |
|
|
| T |
17717182 |
ccatatgcaacagcctcatcgggattaatgctcttgcatagctcctttctgttaaagaaatcctgcaatagttgttgaacctttggaattctggtagaac |
17717083 |
T |
|
| Q |
201 |
caccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgtt |
300 |
Q |
| |
|
| || ||||| ||||| ||||||||||| || | |||| ||||| ||||| || |||||||| |||||||||| | ||| || ||||||| ||| |
|
|
| T |
17717082 |
ctcctacaaggacaacatcatggacacttcctttgtacatcccagcatggctcaaacatttctcaacttgctccatacattccctgaagagatccaagtt |
17716983 |
T |
|
| Q |
301 |
gagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtc |
400 |
Q |
| |
|
|||||||||||| | |||||||| |||| || || || ||||| |||||||| | ||||||||||||||||||| || |||||||| || || | |
|
|
| T |
17716982 |
gagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggcagtagatgatagagct |
17716883 |
T |
|
| Q |
401 |
ctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggt |
500 |
Q |
| |
|
||||| || ||||| |||||||| ||||| || ||||||| ||||| || |||||||| |||||||| ||||| |||||||| ||| ||||||| |||| |
|
|
| T |
17716882 |
ctcttcgccctctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactctcgaacaaagtggt |
17716783 |
T |
|
| Q |
501 |
tcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtgaaacatc |
600 |
Q |
| |
|
||||||| ||||||| |||||| |||||||| | ||| | || || ||||||||||| |||| |||| ||| ||||||||||| || | || ||||| |
|
|
| T |
17716782 |
tcaccattctgttattaaaatcctcacctccaagatgggcgtctccggctgtagctttaacctgaaagttacactcttcaatagttagcaaagagacatc |
17716683 |
T |
|
| Q |
601 |
aaaagttccaccaccaag |
618 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
17716682 |
aaaagtaccaccaccaag |
17716665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 101 - 531
Target Start/End: Complemental strand, 17648536 - 17648106
Alignment:
| Q |
101 |
ccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatc |
200 |
Q |
| |
|
|||||||||||||| |||||||| || ||||| || || ||||||||||| | |||||||| ||||| |||||||||||||| ||||| || || || | |
|
|
| T |
17648536 |
ccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcaatagttgttgaacctttggaattcttgtagaac |
17648437 |
T |
|
| Q |
201 |
caccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgtt |
300 |
Q |
| |
|
| || ||||| |||| ||||||||||| || || |||||| ||||||| ||||| || ||||||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
17648436 |
cgcctacaaggacaatatcatggacactttttttgtccatcctagcatctctcaaacatatctcaacttgctccatacatttcctaaagagatccatgtt |
17648337 |
T |
|
| Q |
301 |
gagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtc |
400 |
Q |
| |
|
|||||| ||||| | |||||||| |||| | | | || ||||| ||||| || | |||||||||||||||||||||| |||| | || || || |
|
|
| T |
17648336 |
gagctcctcaaatcttgcacgagtaatggaggagcagaaatcaattccctcgaatagacaatcaatttcaatggtggtttggagagtaaatgatagagtt |
17648237 |
T |
|
| Q |
401 |
ctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggt |
500 |
Q |
| |
|
||||| || |||| |||||||| ||||| || ||||||| ||||| || |||||||| |||||||| ||||| |||||||| |||||||||| || | |
|
|
| T |
17648236 |
ctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaacacttgaacaaagtgat |
17648137 |
T |
|
| Q |
501 |
tcaccatcctgttatcaaaatcttcacctcc |
531 |
Q |
| |
|
||||||| ||||||| |||||| |||||||| |
|
|
| T |
17648136 |
tcaccattctgttattaaaatcctcacctcc |
17648106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 107 - 531
Target Start/End: Complemental strand, 17622434 - 17622010
Alignment:
| Q |
107 |
gcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaa |
206 |
Q |
| |
|
|||||||| || ||||| || ||||| || || ||||||||||| || |||||||| ||||| | |||||||||||| ||||| || || || || || | |
|
|
| T |
17622434 |
gcaacagcctcgtcgggattaatgctattgcatagctcctttccgttaaagaaatcctgcaataattgttgaacctttggaattctggtagaacctccta |
17622335 |
T |
|
| Q |
207 |
caagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgttgagctc |
306 |
Q |
| |
|
|||| ||||| ||||||||||| | || |||||| |||||| ||||| || |||||||| |||||||||| |||||||| |||||||||||||||| |
|
|
| T |
17622334 |
caaggacaacatcatggacacttgttttgtccatcctagcatttctcaaacatttctcaacttgctccatacatttcctaaagagatccatgttgagctt |
17622235 |
T |
|
| Q |
307 |
ttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctctta |
406 |
Q |
| |
|
|||||| |||||||| |||| | | | || ||||| ||||| || | |||||||||||||||||||||| ||||| | || || || ||||| |
|
|
| T |
17622234 |
ttcaaatgtggcacgagtaatgggggagcagaaatcaattccctcgaatagacaatcaatttcaatggtggtttggacagtaaatgatagagttctcttg |
17622135 |
T |
|
| Q |
407 |
gctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcacca |
506 |
Q |
| |
|
|| |||| |||||||| ||||| || ||||||| ||||| || ||||| || |||||||| ||||| |||||||| ||||||||||| |||||||||| |
|
|
| T |
17622134 |
gccttctcacaagcagtcctcaacctcataagagctcttgggttgccactgatgtccttcttgttctttctcttgaactcttgaacaaagtggttcacca |
17622035 |
T |
|
| Q |
507 |
tcctgttatcaaaatcttcacctcc |
531 |
Q |
| |
|
| ||||||| |||||| |||||||| |
|
|
| T |
17622034 |
ttctgttattaaaatcctcacctcc |
17622010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 101 - 618
Target Start/End: Complemental strand, 17718446 - 17717926
Alignment:
| Q |
101 |
ccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatc |
200 |
Q |
| |
|
|||||||||||||| |||||||| || |||||||| || || |||||||| || |||| ||| ||| | |||||||||||||| ||||| | || || | |
|
|
| T |
17718446 |
ccatatgcaacagcctcatcgggattaatgctcttgcatagatcctttccgttaaagacatcctgccatagttgttgaacctttggaattttggtagaac |
17718347 |
T |
|
| Q |
201 |
caccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgtt |
300 |
Q |
| |
|
| || ||||| ||||| ||||||||||| || | |||| |||| ||||| || |||||||| |||||||||| | ||| || ||||||| ||| |
|
|
| T |
17718346 |
ctcctacaaggacaacatcatggacacttcctttgttcatcccagcacgtctcaaacatttctcaacttgctccatacattccctgaagagatccaagtt |
17718247 |
T |
|
| Q |
301 |
gagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtc |
400 |
Q |
| |
|
|||||||||||| | |||||||| |||| || || || ||||| |||||||| | ||||||||||||||||||| || | |||||| || || | |
|
|
| T |
17718246 |
gagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggaagtagatgatagagct |
17718147 |
T |
|
| Q |
401 |
ctcttagctctctcgcaagcagttctcaatcttc-taagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatgg |
499 |
Q |
| |
|
||||| || ||||| |||||||| ||||| |||| ||||||| ||||| || |||||||| |||||||| ||||| |||||||| ||||||||||| ||| |
|
|
| T |
17718146 |
ctcttcgccctctcacaagcagtcctcaa-cttcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactcttgaacaaagtgg |
17718048 |
T |
|
| Q |
500 |
ttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagta---agtagtgaaa |
596 |
Q |
| |
|
|||||||| ||||||| |||||| |||||||| | ||| | || || ||||||||||| |||| |||| ||| |||||||||||| || | || | |
|
|
| T |
17718047 |
ttcaccattctgttattaaaatcctcacctccaagatgggcgtctccggctgtagctttaacctgaaagttacactcttcaatagtagttagcaaagaga |
17717948 |
T |
|
| Q |
597 |
catcaaaagttccaccaccaag |
618 |
Q |
| |
|
|||||||||| ||||||||||| |
|
|
| T |
17717947 |
catcaaaagtaccaccaccaag |
17717926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 140 - 585
Target Start/End: Complemental strand, 17667139 - 17666694
Alignment:
| Q |
140 |
agctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatcca |
239 |
Q |
| |
|
||||||||||| || |||||||| ||||| | |||||||||||| ||||| || || || || || ||||| ||||| ||||||||||| | || |||| |
|
|
| T |
17667139 |
agctcctttccgttaaagaaatcctgcaataattgttgaacctttggaattctggtagaacctcctacaaggacaacatcatggacacttcttttgtcca |
17667040 |
T |
|
| Q |
240 |
tcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgttgagctcttcaaaacgagcacgagtgatggtagtgtaaaa |
339 |
Q |
| |
|
||||||||| ||||| || |||||||| |||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||| | | | || |
|
|
| T |
17667039 |
tcttagcatttctcaaacatttctcaacttgctccatacatttcctaaagagatccatgttgagctcttcaaatgtggcacgagtaatgaaggagcagaa |
17666940 |
T |
|
| Q |
340 |
gtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctcttagctctctcgcaagcagttctcaatcttctaaga |
439 |
Q |
| |
|
||||| ||||| || | | ||||||||||||||||| ||||||||||| || || | ||||| || ||||| |||||||| | ||| || ||||| |
|
|
| T |
17666939 |
atcaattccctcgaatagacattcaatttcaatggtggtctgagcagtagatgatagagctctcttcgccctctcacaagcagtccccaacctcataaga |
17666840 |
T |
|
| Q |
440 |
gcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtg |
539 |
Q |
| |
|
|| ||||| || ||||| || ||||| || ||||| || ||||| ||||||||||| || |||||||| ||||||| |||||| |||||||| | ||| | |
|
|
| T |
17666839 |
gctcttgggttgccactgatgtccttgttgttctttcttttgaactcttgaacaaagtgattcaccattctgttattaaaatcctcacctccaagatggg |
17666740 |
T |
|
| Q |
540 |
tatcaccagctgtagctttcacctcaaagataccttcttcaatagt |
585 |
Q |
| |
|
|| || | ||||||||| ||| ||| |||||| ||||||||||| |
|
|
| T |
17666739 |
ggtctccggttgtagctttaaccccaatgataccctcttcaatagt |
17666694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 101 - 312
Target Start/End: Complemental strand, 17706207 - 17705997
Alignment:
| Q |
101 |
ccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatc |
200 |
Q |
| |
|
|||||||||||||| |||||||| || ||||| || || ||||||||||| | |||||||| |||| | ||| ||||||||| ||||| || || || | |
|
|
| T |
17706207 |
ccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcata-gtttttgaacctttggaattctggtagaac |
17706109 |
T |
|
| Q |
201 |
caccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgtt |
300 |
Q |
| |
|
| || ||||| ||||| ||||||||||| || || |||||||||||||| ||||| || |||||||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
17706108 |
ctcctacaaggacaacatcatggacactttttttgtccatcttagcatctctcaaacatttctcaacttgctccatacatttcctaaagagatccatgtt |
17706009 |
T |
|
| Q |
301 |
gagctcttcaaa |
312 |
Q |
| |
|
|||||||||||| |
|
|
| T |
17706008 |
gagctcttcaaa |
17705997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 101 - 531
Target Start/End: Complemental strand, 17704550 - 17704120
Alignment:
| Q |
101 |
ccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatc |
200 |
Q |
| |
|
|||||||||||| | || ||||| || ||||| | || |||| ||||| || |||||||| ||||| |||||||||||||| ||||| || || || | |
|
|
| T |
17704550 |
ccatatgcaacaacctcgtcgggattaatgctatcgcatagcttctttctgttaaagaaatcctgcaatagttgttgaacctttggaattctggtagaac |
17704451 |
T |
|
| Q |
201 |
caccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggctccatacacttcctaaacagatccatgtt |
300 |
Q |
| |
|
| || ||||| ||||| ||||||||||| | || |||||| ||||| ||||| ||||| |||| ||||||||| ||| |||| ||||||||||| |
|
|
| T |
17704450 |
ctcctacaaggacaacatcatggacacttgttttgtccatcctagcaaatctcaaaagtttctcgacagtctccatacatttcataaagagatccatgtt |
17704351 |
T |
|
| Q |
301 |
gagctcttcaaaacgagcacgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtc |
400 |
Q |
| |
|
|||||||||||| | |||||||| ||| | ||| | || || || |||| || || || ||||||||||||||||||| |||| | || || || |
|
|
| T |
17704350 |
gagctcttcaaatctggcacgagtaatgatggtgaagaaatccattcccttgaataaacaaacaatttcaatggtggtttggagagtaaatgatagagtt |
17704251 |
T |
|
| Q |
401 |
ctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggt |
500 |
Q |
| |
|
||||| || |||| |||||||| ||||| || ||||||| ||| | | ||||| || |||||| | ||||| |||||||| ||||||||||| | || |
|
|
| T |
17704250 |
ctcttggccttctcacaagcagtcctcaacctcataagagctctttggtcgccactgatgtccttcctgttctttctcttgaactcttgaacaaagtagt |
17704151 |
T |
|
| Q |
501 |
tcaccatcctgttatcaaaatcttcacctcc |
531 |
Q |
| |
|
||||||| ||||||| |||||| |||||||| |
|
|
| T |
17704150 |
tcaccattctgttattaaaatcctcacctcc |
17704120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 435 - 618
Target Start/End: Complemental strand, 17705899 - 17705716
Alignment:
| Q |
435 |
taagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaa |
534 |
Q |
| |
|
||||||| | ||| || |||||||| |||||||| ||||| |||||||| |||| |||||| ||||||||||| ||||||| |||||| |||||||| | |
|
|
| T |
17705899 |
taagagctcatgggttgccactaatgtccttcttcttctttctcttgaactcttaaacaaagtggttcaccattctgttattaaaatcctcacctccaag |
17705800 |
T |
|
| Q |
535 |
atgtgtatcaccagctgtagctttcacctcaaagataccttcttcaatagtaagtagtgaaacatcaaaagttccaccaccaag |
618 |
Q |
| |
|
||| || || || | | ||||||| ||||||| || || ||||||| ||| || | || |||||||||| ||||||||||| |
|
|
| T |
17705799 |
atgggtgtctccggatatagctttaacctcaacgacactctcttcaaaagttagcaaagaggcatcaaaagtcccaccaccaag |
17705716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 16658041 - 16657892
Alignment:
| Q |
72 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaag |
171 |
Q |
| |
|
||||||||||||||||||| || ||||| || || |||||||||||||| |||||||| || || || | ||||| || ||||| || |||||||| || |
|
|
| T |
16658041 |
cactcaaaatagcagcttgaacagctgcaccgtaagcaacagcttcatccgggttgatacttttgcataaatccttgcccttgaaaaagtcttgcaatag |
16657942 |
T |
|
| Q |
172 |
ttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcat |
221 |
Q |
| |
|
| || || ||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
16657941 |
atcctgcactttgggaatcctagatgagccacccacaagaacaacgtcat |
16657892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 159
Target Start/End: Complemental strand, 16662516 - 16662429
Alignment:
| Q |
72 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaa |
159 |
Q |
| |
|
||||||| | ||||||||| || ||||||||||| |||||||| ||||| |||||||||||||| || | |||||| ||||||||||| |
|
|
| T |
16662516 |
cactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaa |
16662429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 215
Target Start/End: Complemental strand, 12245929 - 12245787
Alignment:
| Q |
73 |
actcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagt |
172 |
Q |
| |
|
|||||| | ||||||||| || ||||||||||| |||||||| || || ||||| |||||||| || | ||||| || ||||| || || || || || |
|
|
| T |
12245929 |
actcaacaaagcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagc |
12245830 |
T |
|
| Q |
173 |
tgttgaaccttgggaatcctagtggatccaccaacaagaacaa |
215 |
Q |
| |
|
||||| || ||||||||||||| |||||||||||||| |||| |
|
|
| T |
12245829 |
tgttggactttgggaatcctagaagatccaccaacaagtacaa |
12245787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 72 - 221
Target Start/End: Original strand, 11999052 - 11999200
Alignment:
| Q |
72 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaag |
171 |
Q |
| |
|
||||||| | ||||||||| || ||||||||||| || ||||| ||||| ||||| |||||||| || | |||||| || ||||| || || || || || |
|
|
| T |
11999052 |
cactcaacaaagcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgttgaaaaagtcatgtaatag |
11999151 |
T |
|
| Q |
172 |
ttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcat |
221 |
Q |
| |
|
||||| || ||||| ||||||| |||||||||||||| ||||| |||| |
|
|
| T |
11999152 |
ctgttggactttggg-atcctagaagatccaccaacaagtacaacatcat |
11999200 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 43625057 - 43625116
Alignment:
| Q |
73 |
actcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgct |
132 |
Q |
| |
|
||||||||||||||| ||||| ||||| ||||| |||||||| ||||| ||||| ||||| |
|
|
| T |
43625057 |
actcaaaatagcagcctggacagctgcaccataagcaacagcctcatcagggtttatgct |
43625116 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 249
Target Start/End: Original strand, 14703052 - 14703229
Alignment:
| Q |
72 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaag |
171 |
Q |
| |
|
||||||| | |||||| || || ||||||||||| || ||||||||||| ||||| ||||| || || | |||||| || | ||| || || || || | |
|
|
| T |
14703052 |
cactcaacaaagcagcctgaacagctgccccataagctacagcttcatcagggttaatgctgttgcacaactccttcccctggaaaaagtcctgtaataa |
14703151 |
T |
|
| Q |
172 |
ttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatc |
249 |
Q |
| |
|
||| || || |||||||||| || || ||||| ||||||||||| |||| || || |||| |||||||||||||| |
|
|
| T |
14703152 |
ttgctgtactttgggaatccgagaagacccaccgacaagaacaacatcatctactctactcttgtccatcttagcatc |
14703229 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 7e-17; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 72 - 249
Target Start/End: Original strand, 15594678 - 15594855
Alignment:
| Q |
72 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaag |
171 |
Q |
| |
|
||||||| | |||||| ||||| ||||| ||||| |||||||| ||||| |||||||||||| | || | |||||||| | ||| ||||| | ||| || |
|
|
| T |
15594678 |
cactcaacaaagcagcctggacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaattcctttccctcgaaaaaatccttcaatag |
15594777 |
T |
|
| Q |
172 |
ttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatc |
249 |
Q |
| |
|
|||||| || ||||||||||||| || |||||||||| |||| |||| ||||| |||||| |||||||||||| |
|
|
| T |
15594778 |
ttgttgcactttgggaatcctagaagacccaccaacaatgacaatatcatttacactactcttattcatcttagcatc |
15594855 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 4679079 - 4679018
Alignment:
| Q |
74 |
ctcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctctt |
135 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| |||||||| ||||| |||||||| ||||| |
|
|
| T |
4679079 |
ctcaaaatagcagcttggatagctgcaccataagcaacagcctcatctgggttgatactctt |
4679018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 483
Target Start/End: Complemental strand, 34466991 - 34466906
Alignment:
| Q |
398 |
gtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaa |
483 |
Q |
| |
|
|||||||| || ||||||| ||||||||||| || || | ||| || || ||||||||||||||||| |||| |||||||||||| |
|
|
| T |
34466991 |
gtcctctttgcattctcgcacgcagttctcaacctcctcaaagctctagggtttccactaatatccttattatgcttcctcttgaa |
34466906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 249
Target Start/End: Complemental strand, 34467311 - 34467135
Alignment:
| Q |
73 |
actcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagt |
172 |
Q |
| |
|
|||||| | ||||||||| || ||||| |||| || ||||| ||||| ||||||||||| || || || ||||| |||||||| || || |||| || |
|
|
| T |
34467311 |
actcaacaaagcagcttgcacagctgcgacataagcgacagcctcatcagggttgatgctattgcatagatccttaccattgaaaaagtcccgcaatagc |
34467212 |
T |
|
| Q |
173 |
tgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatc |
249 |
Q |
| |
|
|| || || ||||||||||||| || || || ||||| ||| | ||||| ||||| || | |||||||||||||| |
|
|
| T |
34467211 |
tgctgcactttgggaatcctagaagagcccccgacaaggacagcatcatgcacactactcgtgtccatcttagcatc |
34467135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 282
Target Start/End: Original strand, 12528148 - 12528358
Alignment:
| Q |
72 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaag |
171 |
Q |
| |
|
||||||| | |||||| || || || || ||||| |||||||| ||||| |||||||||||||| | | |||||| || ||||| || || ||||| || |
|
|
| T |
12528148 |
cactcaacaaagcagcctgaacagcggcaccataagcaacagcctcatcagggttgatgctcttgtataactccttgcccttgaaaaactcctgcaatag |
12528247 |
T |
|
| Q |
172 |
ttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatggacactgttcttatccatcttagcatccctcaagcacttctcaacaggc |
271 |
Q |
| |
|
|| | || ||||||||||||| || ||||||||||| |||| |||| ||||| |||| |||||||||||||| |||| || | ||||| | | |
|
|
| T |
12528248 |
ctgcttcactttgggaatcctagacgagccaccaacaagtacaatatcatctacactactcttgtccatcttagcatcggtcaaacaactttcaacggtc |
12528347 |
T |
|
| Q |
272 |
tccatacactt |
282 |
Q |
| |
|
||||||||||| |
|
|
| T |
12528348 |
tccatacactt |
12528358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 42325255 - 42325181
Alignment:
| Q |
141 |
gctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaa |
215 |
Q |
| |
|
|||||||||||| ||| |||| | |||||||||||| ||||| |||||||| ||| ||||||||||||||||| |
|
|
| T |
42325255 |
gctcctttccatcaaagtaatccttcaaaagttgttgtacctttggaatccttgtgcttccaccaacaagaacaa |
42325181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 42273136 - 42273062
Alignment:
| Q |
141 |
gctcctttccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaa |
215 |
Q |
| |
|
|||||||||||| ||| |||| | ||| |||||||| ||||| |||||||| ||| ||||||||||||||||| |
|
|
| T |
42273136 |
gctcctttccatcaaagtaatccttcaagagttgttgtacctttggaatccttgtgcttccaccaacaagaacaa |
42273062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 43744552 - 43744610
Alignment:
| Q |
164 |
tgcaaaagttgttgaaccttgggaatcctagtggatccaccaacaagaacaacgtcatg |
222 |
Q |
| |
|
||||| |||||||| || || |||||||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
43744552 |
tgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatg |
43744610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 407 - 507
Target Start/End: Original strand, 11209371 - 11209471
Alignment:
| Q |
407 |
gctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcacca |
506 |
Q |
| |
|
||||||||||||||||| ||| || ||||| || ||||||||||||||||| ||| | || | ||||||| ||| |||| |||||||||||||||| |
|
|
| T |
11209371 |
gctctctcgcaagcagtcttcagcctcctaagggctcttggatttccactaatgtccattttttccttcctcaagaactctttcacaaaatggttcacca |
11209470 |
T |
|
| Q |
507 |
t |
507 |
Q |
| |
|
| |
|
|
| T |
11209471 |
t |
11209471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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