View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8755_high_11 (Length: 416)
Name: NF8755_high_11
Description: NF8755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8755_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 377; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 17 - 405
Target Start/End: Complemental strand, 25089145 - 25088757
Alignment:
| Q |
17 |
attttgaaccacaccaaaattgcttgatatctctttctcttgacacacatcaaaatcctcaacattttcatctttctcagcttcaatcttttcaaaccca |
116 |
Q |
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|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25089145 |
attttgaaccacacaaacattgcttgatatctctttctcttgacacacatcaaaatcctcaacattttcatctttctcagcttcaatcttttcaaaccca |
25089046 |
T |
|
| Q |
117 |
tcatccaattcatcaacctcattttcttgaactcgatccaactcggatttcgtcttcctcaattcaattgaatcagtaacattcttcttgatttgatctg |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
25089045 |
tcatccaattcatcaacctcattttcttgaactcgatccaactcggatttcgtcttcctcaattcaattgaatcaataacattcttcttgatttgatctg |
25088946 |
T |
|
| Q |
217 |
atttaatcttcctcaatttccctgcagcttcaccaccacccttctgcatatcagatcttatctttcttgattgaattgggcttctcttcttgattccatc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25088945 |
atttaatcttcctcaatttccctgcagcttcaccaccacccttctgcatatcagatcttatctttcttgattgaattgggcttctcttcttgattccatc |
25088846 |
T |
|
| Q |
317 |
agaaatgcatggttcctctgtttttcctttggaaatctgaattgggctacaagtttttctctttgaagacccaattgaggttcttctca |
405 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25088845 |
agaaatgcatggttcctctgtttttcctttggaaatctgaattgggctacaagtttttctctttgaagacccaattgaggttcttctca |
25088757 |
T |
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