View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8755_high_30 (Length: 217)
Name: NF8755_high_30
Description: NF8755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8755_high_30 |
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Alignment Details
Target: chr1 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 35304667 - 35304867
Alignment:
| Q |
1 |
aaaaaggtgtttttcctgcaagtatcttcctttgaatttgaatttttgacgtcgagaagtacttatctgcttgcttaaaaaacttcttggatgcacttca |
100 |
Q |
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| T |
35304667 |
aaaaaggtttttttcctgcaagtatctttctttgaatttgaatttttgacgccgagaagtacttatctgcttgcttaaaaaacttcttggatacacttca |
35304766 |
T |
|
| Q |
101 |
tatggcaatttgaagaagttgcatgattttattttttcgagtaactctagtaattacttggatcttcgaaatatcttgacacctcgaacatcgaaataat |
200 |
Q |
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| T |
35304767 |
tatggcaatttgaagaagttgcatgattttattttttcgagtaactctagtaattacttggatcttcgaaatatcctgacacctcaaacatcaaaataat |
35304866 |
T |
|
| Q |
201 |
t |
201 |
Q |
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| T |
35304867 |
t |
35304867 |
T |
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