View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8755_low_20 (Length: 299)
Name: NF8755_low_20
Description: NF8755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8755_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 21 - 285
Target Start/End: Original strand, 4924640 - 4924904
Alignment:
| Q |
21 |
ggtgtcacgggtgcaaatttaaaaggttgatgattgaagtgccaatgttggtgcctnnnnnnnnnnnnnnnnnnttaattgcaaaaatgattattataat |
120 |
Q |
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| T |
4924640 |
ggtgtcacgggtgcaaatttaaaaggttgatgattgaagtgccaatgttggtgcctagagatcagagagagagattaattgcaaaaatgattattataat |
4924739 |
T |
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| Q |
121 |
aacaagatgaaaggaatgtaggattaattaccttgaatcatcatgatgagatgagtttgtatgtgaataattacgtgataaggagaaggaagggcatggc |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4924740 |
aacaagatgaaaggaatgtaggattaattaccttgaatcatcatgatgagatgagtttgtatgtgaataattacgtgataaggagaaggaagggcatggc |
4924839 |
T |
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| Q |
221 |
ttcaggagagtagggaaatactgaggattatgatgctgctcgttgtaactacttgatagaataat |
285 |
Q |
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| T |
4924840 |
ttcaggagagttgggaaatactgaggattatgatgctgctcgttgtaactacttgatagaataat |
4924904 |
T |
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