View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8755_low_7 (Length: 513)

Name: NF8755_low_7
Description: NF8755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8755_low_7
NF8755_low_7
[»] chr1 (24 HSPs)
chr1 (183-500)||(25264437-25264754)
chr1 (23-109)||(25264828-25264914)
chr1 (301-507)||(13134495-13134703)
chr1 (23-109)||(27910216-27910302)
chr1 (338-500)||(8986583-8986744)
chr1 (28-109)||(10063677-10063758)
chr1 (341-441)||(17017248-17017348)
chr1 (26-109)||(17443215-17443298)
chr1 (26-106)||(20033800-20033880)
chr1 (32-84)||(34104258-34104310)
chr1 (26-80)||(1675643-1675697)
chr1 (349-447)||(33713270-33713368)
chr1 (366-413)||(15299589-15299637)
chr1 (27-78)||(8746845-8746896)
chr1 (26-109)||(16114091-16114174)
chr1 (31-109)||(8986950-8987028)
chr1 (366-453)||(10825433-10825522)
chr1 (41-109)||(22621216-22621284)
chr1 (225-285)||(33713419-33713479)
chr1 (55-109)||(20107172-20107226)
chr1 (33-78)||(25425696-25425741)
chr1 (353-413)||(7220795-7220854)
chr1 (53-109)||(26021745-26021801)
chr1 (53-109)||(27116855-27116911)
[»] chr7 (58 HSPs)
chr7 (225-500)||(2504716-2504992)
chr7 (225-473)||(9890796-9891045)
chr7 (27-109)||(9891166-9891248)
chr7 (341-483)||(26134205-26134348)
chr7 (224-315)||(6170030-6170121)
chr7 (26-109)||(10991627-10991710)
chr7 (335-413)||(20175166-20175244)
chr7 (28-109)||(10938604-10938685)
chr7 (26-87)||(23007970-23008031)
chr7 (26-109)||(26133872-26133953)
chr7 (26-109)||(8158325-8158407)
chr7 (23-109)||(22468319-22468405)
chr7 (28-109)||(2454690-2454771)
chr7 (22-106)||(18448937-18449021)
chr7 (26-105)||(9288264-9288343)
chr7 (26-105)||(9298056-9298135)
chr7 (26-109)||(9501309-9501392)
chr7 (26-109)||(21884281-21884364)
chr7 (26-96)||(24751903-24751973)
chr7 (346-447)||(8038138-8038239)
chr7 (364-464)||(21227860-21227961)
chr7 (32-108)||(21911607-21911683)
chr7 (26-109)||(5484960-5485043)
chr7 (30-109)||(8038382-8038461)
chr7 (27-109)||(9863412-9863494)
chr7 (22-87)||(1728526-1728590)
chr7 (29-78)||(1732025-1732074)
chr7 (366-410)||(2564468-2564512)
chr7 (367-447)||(4901383-4901463)
chr7 (27-87)||(12864555-12864615)
chr7 (33-109)||(21502203-21502279)
chr7 (27-82)||(1279878-1279933)
chr7 (26-109)||(5221695-5221778)
chr7 (26-109)||(9917502-9917585)
chr7 (26-109)||(9925414-9925497)
chr7 (26-77)||(18467689-18467740)
chr7 (366-428)||(18663005-18663068)
chr7 (27-109)||(13708478-13708560)
chr7 (27-109)||(15611694-15611776)
chr7 (26-87)||(2505193-2505254)
chr7 (225-285)||(2454508-2454568)
chr7 (333-441)||(5102025-5102132)
chr7 (53-109)||(6007008-6007064)
chr7 (26-109)||(6040009-6040093)
chr7 (225-285)||(9612772-9612832)
chr7 (225-285)||(9840343-9840403)
chr7 (30-70)||(10414748-10414788)
chr7 (228-287)||(26134082-26134142)
chr7 (372-451)||(8157947-8158026)
chr7 (341-432)||(9612883-9612974)
chr7 (26-93)||(9721938-9722005)
chr7 (341-432)||(9840454-9840545)
chr7 (26-82)||(16224728-16224784)
chr7 (27-83)||(669742-669797)
chr7 (366-406)||(3327047-3327087)
chr7 (26-109)||(4449996-4450077)
chr7 (26-77)||(7398662-7398714)
chr7 (22-78)||(23803812-23803868)
[»] chr5 (40 HSPs)
chr5 (225-507)||(17337137-17337421)
chr5 (341-496)||(27920869-27921026)
chr5 (25-109)||(13692940-13693024)
chr5 (26-87)||(23013735-23013796)
chr5 (29-109)||(17336940-17337020)
chr5 (26-106)||(25921221-25921301)
chr5 (332-427)||(20533475-20533570)
chr5 (350-499)||(28278994-28279145)
chr5 (27-109)||(24188247-24188329)
chr5 (26-109)||(19762280-19762363)
chr5 (225-291)||(32582729-32582796)
chr5 (338-469)||(25922233-25922362)
chr5 (23-109)||(32416495-32416580)
chr5 (355-496)||(32416849-32416988)
chr5 (32-77)||(28254214-28254259)
chr5 (27-102)||(18227010-18227083)
chr5 (26-109)||(24261373-24261457)
chr5 (26-109)||(17831030-17831112)
chr5 (27-109)||(20103588-20103670)
chr5 (26-84)||(23032062-23032120)
chr5 (32-105)||(20533174-20533246)
chr5 (224-285)||(28279200-28279261)
chr5 (22-102)||(26308535-26308615)
chr5 (344-447)||(26308184-26308287)
chr5 (26-108)||(17470282-17470364)
chr5 (343-413)||(17830722-17830792)
chr5 (339-392)||(23379641-23379694)
chr5 (53-109)||(18751348-18751404)
chr5 (25-109)||(26121682-26121766)
chr5 (27-78)||(19964309-19964360)
chr5 (26-109)||(23266120-23266203)
chr5 (218-285)||(26308342-26308409)
chr5 (225-294)||(111914-111983)
chr5 (228-285)||(15544773-15544830)
chr5 (26-67)||(26252854-26252895)
chr5 (20-77)||(26253877-26253934)
chr5 (27-95)||(111706-111774)
chr5 (376-423)||(9521368-9521416)
chr5 (225-285)||(20533373-20533433)
chr5 (33-109)||(22920303-22920379)
[»] chr2 (40 HSPs)
chr2 (338-451)||(8446523-8446636)
chr2 (237-413)||(12557028-12557203)
chr2 (26-106)||(12556813-12556893)
chr2 (27-109)||(25937930-25938011)
chr2 (27-109)||(31433456-31433538)
chr2 (26-109)||(8502158-8502241)
chr2 (26-109)||(26652345-26652428)
chr2 (26-109)||(34368688-34368771)
chr2 (26-108)||(26292074-26292156)
chr2 (27-109)||(31427116-31427198)
chr2 (333-413)||(18932850-18932930)
chr2 (332-432)||(27870300-27870400)
chr2 (26-109)||(8446195-8446278)
chr2 (27-109)||(41789749-41789831)
chr2 (29-78)||(13517050-13517099)
chr2 (30-91)||(30682883-30682944)
chr2 (218-291)||(34368503-34368576)
chr2 (53-109)||(18933156-18933212)
chr2 (26-109)||(17181272-17181355)
chr2 (334-413)||(34368383-34368462)
chr2 (224-290)||(18932971-18933037)
chr2 (234-291)||(8446408-8446465)
chr2 (237-390)||(25937647-25937797)
chr2 (26-109)||(27870621-27870704)
chr2 (430-498)||(18545375-18545445)
chr2 (225-291)||(18922864-18922930)
chr2 (333-447)||(32439645-32439759)
chr2 (41-106)||(20175179-20175244)
chr2 (254-291)||(27870439-27870476)
chr2 (430-481)||(18553387-18553439)
chr2 (53-105)||(27748258-27748310)
chr2 (27-78)||(7707285-7707336)
chr2 (26-109)||(24089899-24089981)
chr2 (26-109)||(27908149-27908231)
chr2 (55-109)||(17891003-17891057)
chr2 (35-109)||(27419214-27419288)
chr2 (35-109)||(27420360-27420434)
chr2 (27-68)||(29985715-29985756)
chr2 (57-109)||(32439370-32439422)
chr2 (50-82)||(41669602-41669634)
[»] chr8 (23 HSPs)
chr8 (191-446)||(45264847-45265101)
chr8 (225-499)||(26008598-26008873)
chr8 (28-82)||(25597098-25597152)
chr8 (333-410)||(17972801-17972878)
chr8 (26-87)||(26009015-26009076)
chr8 (26-86)||(28318317-28318377)
chr8 (26-105)||(17973105-17973184)
chr8 (26-108)||(15059172-15059254)
chr8 (26-109)||(24905523-24905606)
chr8 (27-109)||(5856084-5856166)
chr8 (26-108)||(18829497-18829579)
chr8 (357-447)||(24119177-24119267)
chr8 (26-77)||(24114907-24114958)
chr8 (30-109)||(24519673-24519752)
chr8 (53-106)||(24851600-24851653)
chr8 (26-109)||(19265100-19265182)
chr8 (27-73)||(12565661-12565707)
chr8 (55-109)||(18447615-18447669)
chr8 (372-410)||(29381822-29381860)
chr8 (365-481)||(17969911-17970028)
chr8 (366-410)||(13314450-13314494)
chr8 (29-109)||(17977584-17977664)
chr8 (50-82)||(31014980-31015012)
[»] chr6 (27 HSPs)
chr6 (345-481)||(33655359-33655496)
chr6 (26-109)||(14726488-14726571)
chr6 (359-453)||(26214881-26214974)
chr6 (26-109)||(9386994-9387077)
chr6 (27-109)||(10504518-10504600)
chr6 (27-109)||(26297395-26297477)
chr6 (23-109)||(32759377-32759463)
chr6 (354-492)||(10504126-10504265)
chr6 (26-109)||(3357500-3357582)
chr6 (27-105)||(34479465-34479543)
chr6 (28-109)||(16167137-16167218)
chr6 (333-432)||(9386668-9386767)
chr6 (26-77)||(10821577-10821628)
chr6 (347-422)||(15613547-15613622)
chr6 (26-85)||(26214528-26214587)
chr6 (372-441)||(34479124-34479193)
chr6 (41-109)||(2587646-2587714)
chr6 (199-291)||(33655202-33655294)
chr6 (26-77)||(14882314-14882365)
chr6 (26-109)||(22537597-22537679)
chr6 (30-72)||(17768944-17768986)
chr6 (225-291)||(32759188-32759254)
chr6 (239-285)||(34479278-34479324)
chr6 (33-109)||(15550347-15550424)
chr6 (32-109)||(15613296-15613373)
chr6 (366-410)||(14072775-14072819)
chr6 (30-109)||(24319948-24320028)
[»] chr3 (26 HSPs)
chr3 (216-323)||(11533220-11533325)
chr3 (338-481)||(20339279-20339417)
chr3 (26-87)||(51119163-51119224)
chr3 (26-109)||(26092234-26092317)
chr3 (26-108)||(20886162-20886244)
chr3 (346-432)||(26091904-26091990)
chr3 (26-109)||(20338952-20339035)
chr3 (32-106)||(23055270-23055344)
chr3 (196-291)||(26092047-26092142)
chr3 (32-109)||(28369481-28369558)
chr3 (32-109)||(28377299-28377376)
chr3 (32-109)||(28385121-28385198)
chr3 (26-106)||(21019026-21019106)
chr3 (34-109)||(21084163-21084237)
chr3 (372-410)||(30510515-30510553)
chr3 (27-108)||(32466093-32466173)
chr3 (229-292)||(20339159-20339223)
chr3 (26-109)||(820534-820616)
chr3 (333-451)||(6290367-6290484)
chr3 (27-78)||(10950577-10950628)
chr3 (27-74)||(27820152-27820199)
chr3 (55-108)||(6290803-6290856)
chr3 (375-451)||(26335741-26335818)
chr3 (218-290)||(18473865-18473937)
chr3 (366-410)||(21302516-21302560)
chr3 (355-423)||(23055598-23055666)
[»] scaffold0085 (2 HSPs)
scaffold0085 (26-109)||(23355-23438)
scaffold0085 (225-447)||(23013-23235)
[»] chr4 (42 HSPs)
chr4 (26-109)||(7613066-7613149)
chr4 (23-109)||(11520155-11520241)
chr4 (23-109)||(15049204-15049290)
chr4 (23-109)||(15105134-15105220)
chr4 (228-400)||(10087507-10087679)
chr4 (26-106)||(19547737-19547817)
chr4 (26-109)||(10087801-10087884)
chr4 (346-498)||(7612674-7612828)
chr4 (26-109)||(1832598-1832681)
chr4 (26-105)||(5529308-5529387)
chr4 (26-105)||(9264023-9264102)
chr4 (234-411)||(17661040-17661217)
chr4 (26-109)||(10782886-10782969)
chr4 (26-79)||(20316843-20316896)
chr4 (26-106)||(12838835-12838914)
chr4 (29-109)||(23082980-23083060)
chr4 (26-105)||(9053309-9053388)
chr4 (26-101)||(23975169-23975244)
chr4 (27-78)||(28572459-28572510)
chr4 (26-76)||(4214575-4214625)
chr4 (27-77)||(12216154-12216204)
chr4 (28-78)||(18746354-18746404)
chr4 (341-447)||(19548049-19548154)
chr4 (225-290)||(20317047-20317112)
chr4 (27-109)||(17661308-17661386)
chr4 (32-108)||(18448103-18448179)
chr4 (225-313)||(19547935-19548022)
chr4 (26-77)||(8139840-8139891)
chr4 (23-109)||(9850447-9850534)
chr4 (27-76)||(29245076-29245125)
chr4 (34-82)||(30242485-30242533)
chr4 (27-75)||(48747700-48747748)
chr4 (26-93)||(13588205-13588272)
chr4 (225-291)||(22217877-22217941)
chr4 (28-62)||(17263884-17263918)
chr4 (32-106)||(22217679-22217753)
chr4 (454-496)||(22345585-22345627)
chr4 (28-105)||(12587892-12587968)
chr4 (26-75)||(20314802-20314851)
chr4 (236-285)||(48642751-48642800)
chr4 (366-410)||(12590326-12590370)
chr4 (30-106)||(22527268-22527344)
[»] scaffold0086 (2 HSPs)
scaffold0086 (23-109)||(8736-8822)
scaffold0086 (25-109)||(13528-13612)
[»] scaffold0136 (1 HSPs)
scaffold0136 (26-109)||(14515-14598)
[»] scaffold0019 (1 HSPs)
scaffold0019 (20-109)||(27466-27555)
[»] scaffold0394 (1 HSPs)
scaffold0394 (23-109)||(10751-10838)
[»] scaffold0340 (1 HSPs)
scaffold0340 (32-82)||(16324-16374)
[»] scaffold0111 (1 HSPs)
scaffold0111 (364-410)||(4177-4223)
[»] scaffold0016 (1 HSPs)
scaffold0016 (339-392)||(12771-12824)
[»] scaffold0360 (1 HSPs)
scaffold0360 (27-73)||(17177-17223)
[»] scaffold0032 (1 HSPs)
scaffold0032 (55-109)||(102397-102451)


Alignment Details
Target: chr1 (Bit Score: 306; Significance: 1e-172; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 183 - 500
Target Start/End: Complemental strand, 25264754 - 25264437
Alignment:
Q  183 gcaaattctttcatctgaagtgaactaacactcaaataaagatacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaac 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25264754 gcaaattctttcatctgaagtgaactaacactcaaataaagatacttaggaaagtgacatatctaatatttgtgaaaacctacccgaatcatgaagtaac 25264655  T
Q  283 taagataacaaaataatggtaattaggaaaatattagtaacaacggagaataaattagcataataactttattcttcttacatccttgataaggtagacg 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25264654 taagataacaaaataatggtaattaggaaaatattagtaacaacggagaataaattagcataataactttattcttcttacatccttgataaggtagacg 25264555  T
Q  383 agatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattcatagacggggaacctttaagaccattgagaatttaa 482  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25264554 agatagggttgcctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattcatagacgtggaacctttaagaccattgagaatttaa 25264455  T
Q  483 gtaccctaatttaagtct 500  Q
    ||||||||||||||||||    
T  25264454 gtaccctaatttaagtct 25264437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 25264914 - 25264828
Alignment:
Q  23 taaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25264914 taaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggttagggttcgaagatgaacctc 25264828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 507
Target Start/End: Original strand, 13134495 - 13134703
Alignment:
Q  301 gtaattaggaaaatattagtaacaacggagaata-aattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtt 399  Q
    ||||||||| ||||| ||||| || | ||||||  || ||||||||||  |||||||||||| |||||||| ||| | |||||||||||||||| |  ||    
T  13134495 gtaattagggaaatagtagtatcaccagagaattgaactagcataatagttttattcttctttcatccttggtaaagaagacgagatagggttgcccatt 13134594  T
Q  400 tgtagaactaccgaaagtgagagtatgttgatgaacttctaatattcatagacg-gggaacctttaagaccattgagaatttaagtaccctaatttaagt 498  Q
    |||||||||||||| || ||||||||||||||| || ||||| ||||||||| | | |||||||||  |||||||  |||||||| || | |||||||||    
T  13134595 tgtagaactaccgatagggagagtatgttgatgtacatctaagattcatagatgagtgaacctttagcaccattggaaatttaagaactcaaatttaagt 13134694  T
Q  499 ctctgcttc 507  Q
     | ||||||    
T  13134695 ttatgcttc 13134703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 27910302 - 27910216
Alignment:
Q  23 taaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||| |||||||  ||||||||||||    
T  27910302 taaggtatgttttatttcttttgtaatttgtctttagttaccatgagtaactaaaccatattagggtagggttgtaagatgaacctc 27910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 338 - 500
Target Start/End: Complemental strand, 8986744 - 8986583
Alignment:
Q  338 tagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaactt 437  Q
    |||||||||||||||| ||||| |||||||||| |||  | || ||||||||| ||| |||||||||||||| | | || |||| |||| |||| |||||    
T  8986744 tagcataataactttactcttcctacatccttggtaacat-gatgagatagggatgt-tgtttgtagaactatcaagagggagaatatggtgataaactt 8986647  T
Q  438 ctaatattcatagacggggaa-cctttaagaccattgagaatttaagtaccctaatttaagtct 500  Q
    |||  ||||||||||| |||| |||||| ||| |||||||||||| | ||||||||||||||||    
T  8986646 ctaggattcatagacgaggaaacctttatgacaattgagaatttaggaaccctaatttaagtct 8986583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 10063677 - 10063758
Alignment:
Q  28 tatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||| ||||||||||||||| || |||||||||||||||| |||||||| | | |||||||||||||| ||||||||||||    
T  10063677 tatgtcttatttcttttgtaatttgtctttagttaccatgaataactaaatctttttaggctagggttctaagatgaacctc 10063758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 341 - 441
Target Start/End: Original strand, 17017248 - 17017348
Alignment:
Q  341 cataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttcta 440  Q
    |||| ||||||||||||| || |||||||||||||||||| || ||||||||| | |||||||||||| |||| |  |||| |||||||||| |||||||    
T  17017248 catagtaactttattcttttttcatccttgataaggtagatgaaatagggttgcccgtttgtagaactgccgagaaggagaatatgttgatgtacttcta 17017347  T
Q  441 a 441  Q
    |    
T  17017348 a 17017348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 17443298 - 17443215
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || |||||||| |||||| ||||||||| | | |||||| ||||||| ||||||||||||    
T  17443298 ggtatgttttatttcttttgtaatttgtctttagtcaccatgggtaactaaatctttttaggccagggttctaagatgaacctc 17443215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 20033800 - 20033880
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaac 106  Q
    ||||||||||||||||| ||||| || | |||||||||||||||||||||||||   ||||||||| |||| | |||||||    
T  20033800 ggtatgttttatttcttatgtaatttgtttttagttaccatgagtaactaaacctctttaggctagagttctatgatgaac 20033880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 34104310 - 34104258
Alignment:
Q  32 ttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctatt 84  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||||    
T  34104310 ttttatttcttttgtaatttgtctttagttaccatgaataactaaaccctatt 34104258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 1675643 - 1675697
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccc 80  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||| ||||||||    
T  1675643 ggtatgttttatttcttttgtaatttgtcttttgttaccatgagtagctaaaccc 1675697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 349 - 447
Target Start/End: Complemental strand, 33713368 - 33713270
Alignment:
Q  349 ctttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattca 447  Q
    ||||||||||||| |||||||| |||| ||||| ||||| ||||| |  |||||||||||||||| ||  ||| ||||||||||  ||||||| |||||    
T  33713368 ctttattcttctttcatccttggtaagatagacaagataaggttgcccatttgtagaactaccgagaggaagaatatgttgatgtccttctaagattca 33713270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 413
Target Start/End: Complemental strand, 15299637 - 15299589
Alignment:
Q  366 ccttgataaggtagacga-gatagggttgtctgtttgtagaactaccga 413  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  15299637 ccttggtaaggtagacgatgatagggttgtctgtttgtagaactaccga 15299589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 8746845 - 8746896
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaac 78  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||| |||||    
T  8746845 gtatgttttatttcttttgtaatttatctttgattaccatgagtaattaaac 8746896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 16114174 - 16114091
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||| |||||||||||||||| || | |||||||||||||  |||||||| | | ||||| |||| ||| ||||||||||||    
T  16114174 ggtatgctttatttcttttgtaatttgtttttagttaccatggataactaaatctttttaggttaggtttctaagatgaacctc 16114091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 8987028 - 8986950
Alignment:
Q  31 gttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||| | ||| |||| || |||||| ||||||||||||||||||| |||| ||| ||| |||| ||||||||||||    
T  8987028 gttttatatatttcgtaatttgtctttaattaccatgagtaactaaactctataagggtagagttctaagatgaacctc 8986950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 453
Target Start/End: Complemental strand, 10825522 - 10825433
Alignment:
Q  366 ccttgataaggtagacgagatagggttgtctgtttgtagaactac---cgaaagtgagagtatgttgatgaacttctaatattcatagacg 453  Q
    ||||| ||||||||| | |||||||||||| ||||||||||||||    | ||| |||||| |||| |||||||||||| |||||||||||    
T  10825522 ccttggtaaggtagatgggatagggttgtccgtttgtagaactactaaggtaagagagagtgtgtt-atgaacttctaagattcatagacg 10825433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 22621284 - 22621216
Alignment:
Q  41 ttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||| || |||||| |||||||| ||||||||| | | |||||||||||||| || |||||||||    
T  22621284 ttttgtaatttgtctttatttaccatgtgtaactaaatctttttaggctagggttctaaaatgaacctc 22621216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 33713479 - 33713419
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaa 285  Q
    ||||||||||||| |||||||||||||| ||| |||||| ||  ||||| |||||||||||    
T  33713479 tacttaggaaagtaacatacctaatattggtgtaaacctgccataatcaagaagtaactaa 33713419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 20107226 - 20107172
Alignment:
Q  55 tttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||| ||||||||||| | ||||| ||| |||| ||||||||||||    
T  20107226 tttagttaccatgtgtaactaaacctttttaggttagagttctaagatgaacctc 20107172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 25425741 - 25425696
Alignment:
Q  33 tttatttcttttgtaaattatctttagttaccatgagtaactaaac 78  Q
    |||||||||||||||| || ||||| ||||| ||||||||||||||    
T  25425741 tttatttcttttgtaatttgtctttggttacaatgagtaactaaac 25425696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 7220854 - 7220795
Alignment:
Q  353 attcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccga 413  Q
    ||||||||| || ||||| |||||||||||||||| | ||| | |||||||||||||||||    
T  7220854 attcttctttca-ccttggtaaggtagacgagataagcttgcccgtttgtagaactaccga 7220795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 26021801 - 26021745
Alignment:
Q  53 tctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||| |||||||||   ||||||| || ||||| ||||||||||||    
T  26021801 tctttagttaccatgtgtaactaaatattattaggttatggttctaagatgaacctc 26021745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 27116855 - 27116911
Alignment:
Q  53 tctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||| |||||||||   | ||| |||||||||| ||||||||||||    
T  27116855 tctttagttaccatgtgtaactaaatatttttaagctagggttctaagatgaacctc 27116911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 5e-54; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 225 - 500
Target Start/End: Complemental strand, 2504992 - 2504716
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaaataatggtaattaggaaaatattagtaaca 324  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||| |  ||||||||| |||||  |    |||||||  ||| ||| | ||||||||    
T  2504992 tacttagggaagtgacatacctaatattggtgaaaacctacccaaattaaaaagtaactacgataatgagt--atggtaaacagggaaagagtagtaaca 2504895  T
Q  325 acggagaa-taaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagt 423  Q
    || ||||| | ||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||  |  |||||||||||||||| || ||||||    
T  2504894 acagagaagttaattagcataataactttattcttctttcatccttggtaaggtagacgagatatggtttcccatttgtagaactaccgagagggagagt 2504795  T
Q  424 atgt-tgatgaacttctaatattcatagacg-gggaacctttaagaccattgagaatttaagtaccctaatttaagtct 500  Q
    ||||  ||||||||||||| ||||||||||| | ||||||||| |||| ||||||||||| | ||||||||||||||||    
T  2504794 atgtaagatgaacttctaacattcatagacgagagaacctttaggaccgttgagaatttatgaaccctaatttaagtct 2504716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 225 - 473
Target Start/End: Complemental strand, 9891045 - 9890796
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaaata-atggtaattaggaaaatattagtaac 323  Q
    ||||||||  |||||||||||||||||| |||||||||||| | ||||| ||||||||||| ||||||||| | ||  |||||||| ||||| |||||||    
T  9891045 tacttagggtagtgacatacctaatattggtgaaaacctactctaatcaggaagtaactaatataacaaaacacat--taattaggcaaatagtagtaac 9890948  T
Q  324 aacggagaat-aaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagag 422  Q
        | |||| |||| | |||| | |||||  ||||||| |||||||| |||||||||||||| ||||  ||| |||| |||||||| ||| ||||||||    
T  9890947 tttagggaattaaatcatcatagtgactttgctcttcttccatccttggtaaggtagacgagaaagggaagtcagtttttagaactatcgagagtgagag 9890848  T
Q  423 tatgttgatgaacttctaatattcataga-cggggaacctttaagaccattg 473  Q
    |||||||||| |||||||| |||||| || | ||||||||||| ||||||||    
T  9890847 tatgttgatgtacttctaagattcattgatcagggaacctttatgaccattg 9890796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 9891248 - 9891166
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  9891248 gtatattttatttcttttgtaatttgtctttagttaccatgagtaactaaaccctattaggatagggttctaagatgaacctc 9891166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 341 - 483
Target Start/End: Original strand, 26134205 - 26134348
Alignment:
Q  341 cataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttcta 440  Q
    ||||||||  ||| ||||| | |||||||| |||||||||||||||| ||||||| ||||||||||||||||| || ||||||||| || |  |||||||    
T  26134205 cataataatcttactcttcgttcatccttggtaaggtagacgagatatggttgtccgtttgtagaactaccgagagggagagtatgatgctatacttcta 26134304  T
Q  441 atattcatagacg-gggaacctttaagaccattgagaatttaag 483  Q
    | ||||||||| | | |||| |||| ||||||||||||||||||    
T  26134305 agattcatagaagagtgaacttttaggaccattgagaatttaag 26134348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 224 - 315
Target Start/End: Complemental strand, 6170121 - 6170030
Alignment:
Q  224 atacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaaataatggtaattaggaaaata 315  Q
    ||||||| ||||| |||||||||| |||| ||||||||||||| || ||| ||||||||||||||||| ||||||  |||||||||||||||    
T  6170121 atacttatgaaagcgacatacctattattggtgaaaacctacctgagtcaagaagtaactaagataacgaaataacagtaattaggaaaata 6170030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 10991627 - 10991710
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||||||||| | |||||||||||||| || |||| ||||    
T  10991627 ggtatgttttatttcttttgtaatttgtctttaggtaccatgagtaactaaacctttttaggctagggttctaatatgaccctc 10991710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 20175244 - 20175166
Alignment:
Q  335 aattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccga 413  Q
    ||||||| || |||||| ||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  20175244 aattagcctagtaacttcattcttctttcatccttggtaaggtagacgagatggggttgtccgtttgtagaactaccga 20175166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 10938685 - 10938604
Alignment:
Q  28 tatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||| || |||||||||||| | |||||||||| | | |||||||||||||| ||||||||||||    
T  10938685 tatgttttatttcttttgtaatttgtctttagttaccctaagtaactaaatctttttaggctagggttctaagatgaacctc 10938604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 23008031 - 23007970
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattagg 87  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  23008031 ggtatgttttatttcttttgtaatttgtctttagttaccatgagtaactaaaacctattagg 23007970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 26133872 - 26133953
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || |||  |||||||||||||||||||||||||||||| || ||||  ||||||||||||    
T  26133872 ggtatgttttatttcttttgtaatttgtct--agttaccatgagtaactaaaccctattagggtatggttataagatgaacctc 26133953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 8158407 - 8158325
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||| |||||||||||||  ||||| |||||||||||||||||||||||||| || |||||||  ||||||||||||    
T  8158407 ggtatgttttaattcttttgtaaatcgtctttggttaccatgagtaactaaaccctatttgg-tagggttttaagatgaacctc 8158325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 22468405 - 22468319
Alignment:
Q  23 taaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||||||| || | ||||||||||| | ||||||||| | | ||||| |||||||| ||||||||||||    
T  22468405 taaggtatgttttatttcttttgtaatttgtttttagttaccaagggtaactaaatctttttaggatagggttctaagatgaacctc 22468319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 2454771 - 2454690
Alignment:
Q  28 tatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||  | |||||| |||||||||||| ||||||||||||| | | |||||| ||||||||||||    
T  2454771 tatgttttatttcttttgtaatatgtctttatttaccatgagtagctaaaccctattaaggttgggttctaagatgaacctc 2454690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 18449021 - 18448937
Alignment:
Q  22 ttaaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaac 106  Q
    |||||| || ||||||||||||||||| || ||||||||||||||| ||||||||| | | |||| ||||||||| |||||||||    
T  18449021 ttaaggaatattttatttcttttgtaatttgtctttagttaccatgtgtaactaaatctttttagtctagggttctaagatgaac 18448937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 9288343 - 9288264
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaa 105  Q
    ||||||||||||||||||||||| |||| ||||||||||||| |||||||||   | ||| |||||||||| ||||||||    
T  9288343 ggtatgttttatttcttttgtaagttatttttagttaccatgggtaactaaatatttttaagctagggttctaagatgaa 9288264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 9298135 - 9298056
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaa 105  Q
    ||||||||||||||||||||||| |||| ||||||||||||| |||||||||   | ||| |||||||||| ||||||||    
T  9298135 ggtatgttttatttcttttgtaagttatttttagttaccatgggtaactaaatatttttaagctagggttctaagatgaa 9298056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 9501392 - 9501309
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||| ||||||||||| | |||| ||||||||||||| |||| |||| | | |||||||||||||| ||||||||||||    
T  9501392 ggtatgtttgatttcttttgtgatttatttttagttaccatgggtaattaaatctttttaggctagggttctaagatgaacctc 9501309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 21884281 - 21884364
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||| |||| |||||||||||| || ||||||||||||||||||||||||| | | |||||||| ||||| || |||||||||    
T  21884281 ggtattttttgtttcttttgtaatttgtctttagttaccatgagtaactaaatctttttaggctaaggttctaacatgaacctc 21884364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 24751903 - 24751973
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttc 96  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||||||||  | ||||| ||||||||    
T  24751903 ggtatgttttatttcttttgtaatttttttttagttaccatgagtaactaaacttttttaggttagggttc 24751973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 447
Target Start/End: Complemental strand, 8038239 - 8038138
Alignment:
Q  346 taactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatatt 445  Q
    |||||||||||||||| |||| ||| ||| |||||||||| ||||||| | ||||||||||||| ||| || |||| |||||| |||   ||||||||||    
T  8038239 taactttattcttctttcatctttggtaatgtagacgagacagggttgcccgtttgtagaactatcgagagggagaatatgtttatgtctttctaatatt 8038140  T
Q  446 ca 447  Q
    ||    
T  8038139 ca 8038138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 464
Target Start/End: Complemental strand, 21227961 - 21227860
Alignment:
Q  364 atccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattcatagacg-gggaacctt 462  Q
    ||||||| |||| ||||| ||||||||||| ||||||||||||||||| | ||  |||||||| ||||| |||||||| ||| ||||| | |||||||||    
T  21227961 atccttggtaagatagacaagatagggttgcctgtttgtagaactaccaagaggaagagtatgctgatgtacttctaagattaatagatgagggaacctt 21227862  T
Q  463 ta 464  Q
    ||    
T  21227861 ta 21227860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 21911607 - 21911683
Alignment:
Q  32 ttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacct 108  Q
    ||||||||||||||||| || |||||||||||||||| |||||||| | | |||||||| ||||| || ||||||||    
T  21911607 ttttatttcttttgtaatttttctttagttaccatgaataactaaatctttttaggctaaggttctaacatgaacct 21911683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 5485043 - 5484960
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || | |||||||| |||| ||||||||| | | |||||| | ||||| ||||||||||||    
T  5485043 ggtatgttttatttcttttgtaatttgtttttagttatcatgggtaactaaatctttttaggccatggttctaagatgaacctc 5484960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 8038461 - 8038382
Alignment:
Q  30 tgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||| |||||||||||||| || |||||||||||||||||||| | |||| | ||| |||||||||| || |||||||||    
T  8038461 tgttatatttcttttgtaatttgtctttagttaccatgagtaaattaacctttttaagctagggttctaaaatgaacctc 8038382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 9863412 - 9863494
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||| |||||||||||| || |||||||||||||||| ||||||||   | ||||| ||| |||| ||||||||||||    
T  9863412 gtatgttttttttcttttgtaatttgtctttagttaccatgattaactaaatatttttagggtagtgttctaagatgaacctc 9863494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 1728590 - 1728526
Alignment:
Q  22 ttaaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattagg 87  Q
    |||||||||| |||||||||||||||| || | |||||||| ||||||||||||||||| ||||||    
T  1728590 ttaaggtatgctttatttcttttgtaatttgt-tttagttatcatgagtaactaaaccccattagg 1728526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 1732074 - 1732025
Alignment:
Q  29 atgttttatttcttttgtaaattatctttagttaccatgagtaactaaac 78  Q
    |||||||||||||||||||| || |||||||||| |||||||||||||||    
T  1732074 atgttttatttcttttgtaatttgtctttagttatcatgagtaactaaac 1732025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 2564512 - 2564468
Alignment:
Q  366 ccttgataaggtagacgagatagggttgtctgtttgtagaactac 410  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||    
T  2564512 ccttggtaaggtagacgagatagggttgcctgtttgtagaactac 2564468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 447
Target Start/End: Original strand, 4901383 - 4901463
Alignment:
Q  367 cttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattca 447  Q
    |||| ||||||||||||||||||| || |  |||||||||||||||| || |||||| ||||||||  ||||||| |||||    
T  4901383 cttggtaaggtagacgagatagggatgcccatttgtagaactaccgagagggagagtttgttgatgtccttctaagattca 4901463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 12864615 - 12864555
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattagg 87  Q
    ||||||||| |||||||||||| |||| ||||||| |||||||||||||||| ||| ||||    
T  12864615 gtatgttttgtttcttttgtaatttatatttagttgccatgagtaactaaactctaatagg 12864555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 21502279 - 21502203
Alignment:
Q  33 tttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||| || | ||||||||||||  ||||||||| | | ||| |||||||||| ||||||||||||    
T  21502279 tttatttcttttgtaatttgtttttagttaccattggtaactaaatctttttacgctagggttctaagatgaacctc 21502203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 1279933 - 1279878
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaacccta 82  Q
    |||| ||||||||||||||||| || ||||||||||||||||||| | ||||||||    
T  1279933 gtatcttttatttcttttgtaatttttctttagttaccatgagtagcaaaacccta 1279878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 5221695 - 5221778
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||| ||| |||||||||||||| || | ||| ||||||||| ||||||||| | | ||||||||| |||| ||||||||||||    
T  5221695 ggtacgttctatttcttttgtaatttgttttttgttaccatgggtaactaaatctttttaggctagagttctaagatgaacctc 5221778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 9917585 - 9917502
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||| |||||||| || ||||||||||||||| || ||||||   | |||| ||||||||| ||||||| ||||    
T  9917585 ggtatgttttattttttttgtaatttgtctttagttaccatgtgtgactaaatatttttagactagggttctaagatgagcctc 9917502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 9925497 - 9925414
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||| |||||||| || ||||||||||||||| || ||||||   | |||| ||||||||| ||||||| ||||    
T  9925497 ggtatgttttattttttttgtaatttgtctttagttaccatgtgtgactaaatatttttagactagggttctaagatgagcctc 9925414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 18467740 - 18467689
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaa 77  Q
    ||||||||||||||||||||||| || | |||| ||||||||||||||||||    
T  18467740 ggtatgttttatttcttttgtaatttgtttttacttaccatgagtaactaaa 18467689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 428
Target Start/End: Complemental strand, 18663068 - 18663005
Alignment:
Q  366 ccttgataaggtagacga-gatagggttgtctgtttgtagaactaccgaaagtgagagtatgtt 428  Q
    ||||| |||||||||||  |||||||||||| |||||||||||||||||||| |||||| ||||    
T  18663068 ccttggtaaggtagacgctgatagggttgtccgtttgtagaactaccgaaagggagagtgtgtt 18663005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 13708560 - 13708478
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||| ||||||||||||| || ||||||||||||||| |  |||||| |    ||||||||||||| ||||||||||||    
T  13708560 gtatgtttgatttcttttgtaatttgtctttagttaccatgtgatactaaatctctgtaggctagggttctaagatgaacctc 13708478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 15611694 - 15611776
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||| |||||||| || |||| |||| | ||||||||||||| |   |||||||||||||| | ||||||||||    
T  15611694 gtatgttttatttgttttgtaatttgtcttaagtttctatgagtaactaaatctctttaggctagggttctatgatgaacctc 15611776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 2505254 - 2505193
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattagg 87  Q
    ||||||||||||||||||| ||| || ||||||||||  | ||||||||||||| |||||||    
T  2505254 ggtatgttttatttcttttttaatttgtctttagttattacgagtaactaaaccttattagg 2505193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 2454568 - 2454508
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaa 285  Q
    |||||||||| ||||||| ||||||||| ||| |||||||||| ||| | |||||||||||    
T  2454568 tacttaggaaggtgacattcctaatattggtgtaaacctacccaaataaggaagtaactaa 2454508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 441
Target Start/End: Original strand, 5102025 - 5102132
Alignment:
Q  333 taaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatg 432  Q
    ||||||||| || |||||| ||||||||| || ||| | ||||||||| ||||||||||||   |||||||||||||| || || |||||| || |||||    
T  5102025 taaattagcttagtaacttcattcttctttca-cctcggtaaggtagatgagatagggttgctcgtttgtagaactactgagagggagagtgtgctgatg 5102123  T
Q  433 aacttctaa 441  Q
      |||||||    
T  5102124 tccttctaa 5102132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 6007064 - 6007008
Alignment:
Q  53 tctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||| ||||||||| | ||||||| || ||||| ||||||||||||    
T  6007064 tctttagttaccatgtgtaactaaatcttattaggttatggttctaagatgaacctc 6007008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 6040009 - 6040093
Alignment:
Q  26 ggtatgttttatttcttttgtaaatta-tctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||| ||||||||||||| | ||||  | |||||||||||||||||||||||   | |||||||||||||  ||||||||||||    
T  6040009 ggtatattttatttctttttttaatttgtttttagttaccatgagtaactaaatatttttaggctagggttttaagatgaacctc 6040093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 9612772 - 9612832
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaa 285  Q
    |||||||||| |||||| |||||||||| ||| |||||||||  ||||| |||||||||||    
T  9612772 tacttaggaaggtgacaaacctaatattggtgcaaacctaccttaatcaggaagtaactaa 9612832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 9840343 - 9840403
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaa 285  Q
    |||||||||| |||||| |||||||||| ||| |||||||||  ||||| |||||||||||    
T  9840343 tacttaggaaggtgacaaacctaatattggtgcaaacctaccttaatcaggaagtaactaa 9840403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 10414748 - 10414788
Alignment:
Q  30 tgttttatttcttttgtaaattatctttagttaccatgagt 70  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  10414748 tgttttatttcttttgtaatttgtctttagttaccatgagt 10414788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 26134082 - 26134142
Alignment:
Q  228 ttaggaaagtgacatacctaatatttg-tgaaaacctacccgaatcatgaagtaactaaga 287  Q
    ||||| |||||||||||||||| |||| ||||||||||||||||| | | |||||||||||    
T  26134082 ttagggaagtgacatacctaatgtttggtgaaaacctacccgaattaaggagtaactaaga 26134142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 451
Target Start/End: Complemental strand, 8158026 - 8157947
Alignment:
Q  372 taaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattcataga 451  Q
    |||||| |||||||||||||||  |||||||||||||| | | ||  | ||||| |||||| |||||||| |||||||||    
T  8158026 taaggttgacgagatagggttgcatgtttgtagaactatcaagaggaatagtattttgatgtacttctaagattcataga 8157947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 9612883 - 9612974
Alignment:
Q  341 cataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatg 432  Q
    |||| |||||||||||||||| || ||||| ||||||| ||||||| |||  |   ||||||| ||||||||| || |||| ||||||||||    
T  9612883 catagtaactttattcttctttcaaccttggtaaggtaaacgagatggggcggcacgtttgtaaaactaccgagagggagaatatgttgatg 9612974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 9722005 - 9721938
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctaggg 93  Q
    ||||| ||||||||  ||||||  ||||||||||||||||||||||||||||   | |||||||||||    
T  9722005 ggtatattttatttactttgtactttatctttagttaccatgagtaactaaatatttttaggctaggg 9721938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 9840454 - 9840545
Alignment:
Q  341 cataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatg 432  Q
    |||| |||||||||||||||| || ||||| ||||||| ||||||| |||  |   ||||||| ||||||||| || |||| ||||||||||    
T  9840454 catagtaactttattcttctttcaaccttggtaaggtaaacgagatggggcggcacgtttgtaaaactaccgagagggagaatatgttgatg 9840545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 16224728 - 16224784
Alignment:
Q  26 ggtatgttttatttcttttgtaaattat-ctttagttaccatgagtaactaaacccta 82  Q
    ||||||||||||| ||||||||| || | |||||||||| ||||||||||||||||||    
T  16224728 ggtatgttttatt-cttttgtaattttttctttagttactatgagtaactaaacccta 16224784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 669742 - 669797
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctat 83  Q
    ||||||||||||| |||||||| || | |||||||||||||||||| ||| ||||||    
T  669742 gtatgttttatttattttgtaa-ttgtttttagttaccatgagtaattaagccctat 669797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 3327047 - 3327087
Alignment:
Q  366 ccttgataaggtagacgagatagggttgtctgtttgtagaa 406  Q
    ||||| |||||||||||||||| ||||| ||||||||||||    
T  3327047 ccttggtaaggtagacgagatatggttgcctgtttgtagaa 3327087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 4450077 - 4449996
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||  |||| |||| || | ||||||||||||| ||||||||| | | ||||| ||| |||| ||||||||||||    
T  4450077 ggtatgttttat--ctttagtaatttgtttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctc 4449996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 7398714 - 7398662
Alignment:
Q  26 ggtatgttttatttcttttgtaaattat-ctttagttaccatgagtaactaaa 77  Q
    |||| |||||||||||||||||| |  | ||||||||||||||||||||||||    
T  7398714 ggtaagttttatttcttttgtaattagtgctttagttaccatgagtaactaaa 7398662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 23803868 - 23803812
Alignment:
Q  22 ttaaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaac 78  Q
    |||| |||||||||||||||||||||   | ||||| |||| |||||||||||||||    
T  23803868 ttaaagtatgttttatttcttttgtatcatgtcttttgttatcatgagtaactaaac 23803812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 225 - 507
Target Start/End: Original strand, 17337137 - 17337421
Alignment:
Q  225 tacttaggaaagtgacata-cctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaa--ataatggtaattaggaaaatattagta 321  Q
    |||||||| |||||||||| ||||||||| ||||||||||||| |||| | |||||||||||||||||| |  | |||   | ||||| ||| | |||||    
T  17337137 tacttagggaagtgacataacctaatattggtgaaaacctacctgaataaggaagtaactaagataacagaccacaat---atttagggaaacaatagta 17337233  T
Q  322 acaacggagaataa-attagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgag 420  Q
    || || | |||| | || | |||| ||||||| ||||| || || ||||  |||||||||||||||| ||||||| ||||||||||||||||| || | |    
T  17337234 actacagggaattagatcaacatagtaactttcttcttgtttcagccttcgtaaggtagacgagataaggttgtccgtttgtagaactaccgagaggggg 17337333  T
Q  421 agtatgttgatgaacttctaatattcatagacg-gggaacctttaagaccattgagaatttaagtaccctaatttaagtctctgcttc 507  Q
    |||||||||||| |||||||| ||| ||||| | ||||||||||| ||||||||  |||||| | || ||||||||||| | ||||||    
T  17337334 agtatgttgatgtacttctaagattgatagatgagggaacctttaggaccattggaaatttaggaactctaatttaagtatatgcttc 17337421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 341 - 496
Target Start/End: Original strand, 27920869 - 27921026
Alignment:
Q  341 cataataactttattcttcttacatccttga-taaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttct 439  Q
    |||||||| |||| ||||||||||||||||  ||||||||| ||||||||| || | |||||||||||| | || || |||| |||| ||||| ||||||    
T  27920869 cataataattttactcttcttacatccttgggtaaggtagatgagatagggctgcccgtttgtagaactgctgagagggagaatatgctgatgtacttct 27920968  T
Q  440 aatattcatagacg-gggaacctttaagaccattgagaatttaagtaccctaatttaa 496  Q
    || ||||||||| | ||||||||||| ||||||||| |||||||| || ||| |||||    
T  27920969 aagattcatagatgagggaacctttaggaccattgaaaatttaagaactctagtttaa 27921026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 13693024 - 13692940
Alignment:
Q  25 aggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||| | | ||| |||||||||| ||||||||||||    
T  13693024 aggtatgttttatttcttttgtaatttgtctttagttaccatgagtaactaaaactttttacgctagggttctaagatgaacctc 13692940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 23013735 - 23013796
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattagg 87  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||    
T  23013735 ggtatgttttatttcttttgtaatttgtctttagttaccatgagtaactaaaccttattagg 23013796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 17336940 - 17337020
Alignment:
Q  29 atgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||| || | |||||||||| ||| |||||||||||||||||| |||||||| ||||| ||||||    
T  17336940 atgttttatttcttttgtaatttgtttttagttaccttgaataactaaaccctattagggtagggttctaagataaacctc 17337020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 25921221 - 25921301
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaac 106  Q
    ||||||| ||||| ||||||||| || ||||||||||||||||||||||||| ||||| ||| |||||||| |||||||||    
T  25921221 ggtatgtcttattacttttgtaatttgtctttagttaccatgagtaactaaatcctatcagggtagggttctaagatgaac 25921301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 427
Target Start/End: Original strand, 20533475 - 20533570
Alignment:
Q  332 ataaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgt 427  Q
    |||||| | |||||||||||||||||||||||||||||| ||| ||||| |||||| ||||| |  |||||||||||||||| || |||| |||||    
T  20533475 ataaatcaacataataactttattcttcttacatccttggtaatgtagatgagatatggttgcccatttgtagaactaccgagagggagaatatgt 20533570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 499
Target Start/End: Complemental strand, 28279145 - 28278994
Alignment:
Q  350 tttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattca-t 448  Q
    |||||||||||| ||||||||||||||||||||||| | ||  |   ||||||||||||||||| |  |||| |||||||||  |||| ||||||||| |    
T  28279145 tttattcttctttcatccttgataaggtagacgagacatggccgctcgtttgtagaactaccgataaagagaatatgttgatttacttgtaatattcaat 28279046  T
Q  449 agacggg-gaacctttaagaccattgagaatttaagtaccctaatttaagtc 499  Q
    ||||| | || |||  | |||||||||||||||| | |||||||||||||||    
T  28279045 agacgagtgagcctaaatgaccattgagaatttaggaaccctaatttaagtc 28278994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 24188329 - 24188247
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||| || | ||||||||||||| ||||||||| | | |||||||||| ||| ||||||||||||    
T  24188329 gtatgttttatttcttttgtaatttgtttttagttaccatgggtaactaaatcgttttaggctaggattctaagatgaacctc 24188247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 19762280 - 19762363
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || | ||||||||||||| |||||||||   | |||||||||||||| ||||| ||||||    
T  19762280 ggtatgttttatttcttttgtaatttgtttttagttaccatgggtaactaaatatttttaggctagggttctaagataaacctc 19762363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 32582796 - 32582729
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtg-aaaacctacccgaatcatgaagtaactaagataac 291  Q
    |||||||||| ||||||||||||||||| ||| |||| |||||||||||| |||||||||||||||||    
T  32582796 tacttaggaaggtgacatacctaatattggtgaaaaatctacccgaatcaggaagtaactaagataac 32582729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 469
Target Start/End: Original strand, 25922233 - 25922362
Alignment:
Q  338 tagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaactt 437  Q
    ||||||||||||| || |||||||||||||||| ||||||||  || ||| || |   ||||||||||||||||||    |||||||||||||||||| |    
T  25922233 tagcataataactataatcttcttacatccttggtaaggtaggggatatatggcttcttgtttgtagaactaccga---ggagagtatgttgatgaacgt 25922329  T
Q  438 ctaatattcatagacg-gggaacctttaagacc 469  Q
    |||| ||||||| ||| | ||||||||| ||||    
T  25922330 ctaagattcatatacgagagaacctttaggacc 25922362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 32416495 - 32416580
Alignment:
Q  23 taaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||| | |||||||||| || ||||||||||| ||||||| ||||||||||||||| || ||||| || |||||||||    
T  32416495 taaggtatgttttttctcttttgtaatttgtctttagttactatgagtagctaaaccctattagg-tatggttctaaaatgaacctc 32416580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 496
Target Start/End: Original strand, 32416849 - 32416988
Alignment:
Q  355 tcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattcatagacgg 454  Q
    |||||||||||| ||| |||||||||| |||||  |||||  |||||||||| || ||| || |||| |||||||||  |||||||| ||||||||| |     
T  32416849 tcttcttacatcattggtaaggtagacaagatatagttgttcgtttgtagaattatcgagagggagaatatgttgatatacttctaagattcatagatga 32416948  T
Q  455 ggaacctttaagaccattgagaatttaagtaccctaatttaa 496  Q
    |||   |||| |||||||||||||||| | || |||||||||    
T  32416949 gga--gtttaggaccattgagaatttaggaactctaatttaa 32416988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 28254259 - 28254214
Alignment:
Q  32 ttttatttcttttgtaaattatctttagttaccatgagtaactaaa 77  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  28254259 ttttatttcttttgtaatttatctttagttaccatgagtaactaaa 28254214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 18227083 - 18227010
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagat 102  Q
    |||||||||||||  ||||||| |||||||||||||||||||||| ||||| | | |||||||||||||| |||||    
T  18227083 gtatgttttattt--tttgtaatttatctttagttaccatgagtagctaaatcttgttaggctagggttctaagat 18227010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 24261457 - 24261373
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatcttt-agttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||| |||||||||||||||||| |||| ||| |||||||||||||||||||| | | |||||||||||||  | ||||||||||    
T  24261457 ggtaagttttatttcttttgtaatttattttttagttaccatgagtaactaaatctttttaggctagggttttatgatgaacctc 24261373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 17831112 - 17831030
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||| ||| |||| ||||| ||||||| |||||||||||||| | | ||||| |||||||| ||||||||||||    
T  17831112 ggtatgttttatttgttt-gtaatttatccttagttatcatgagtaactaaatctttttaggttagggttctaagatgaacctc 17831030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 20103588 - 20103670
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||  |||||||| || | |||||||||||||||||||||||||||| | |  |||| ||| ||||||||||||    
T  20103588 gtatgttttattgattttgtaatttttttttagttaccatgagtaactaaaccctaattgagtaggcttctaagatgaacctc 20103670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 23032120 - 23032062
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctatt 84  Q
    ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||| ||||    
T  23032120 ggtatattttatttcttttgtaatttgtctttagttacgatgagtaactaaaccatatt 23032062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 20533174 - 20533246
Alignment:
Q  32 ttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaa 105  Q
    ||||||||||||||||| || ||||| ||||||||||||||| ||||| ||||||| || ||||| ||||||||    
T  20533174 ttttatttcttttgtaatttgtcttttgttaccatgagtaacaaaaccttattagggta-ggttctaagatgaa 20533246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 28279261 - 28279200
Alignment:
Q  224 atacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaa 285  Q
    ||||||||||| |||||||| |||||||| ||| ||||||||| |||||| |||||||||||    
T  28279261 atacttaggaacgtgacatatctaatattggtgcaaacctacctgaatcaagaagtaactaa 28279200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 26308615 - 26308535
Alignment:
Q  22 ttaaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagat 102  Q
    ||||| ||| ||||||||||||||||| || ||  |||||||||| |||||||||| | | |||||||||||||| |||||    
T  26308615 ttaagatatattttatttcttttgtaatttgtcggtagttaccattagtaactaaatctttttaggctagggttcaaagat 26308535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 447
Target Start/End: Complemental strand, 26308287 - 26308184
Alignment:
Q  344 aataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaata 443  Q
    ||||||||  ||||| || |||||||| |||||||| ||||||||||||| |  |||||||||||||| | |  |||||| ||||||||  ||||||| |    
T  26308287 aataacttccttcttatttcatccttggtaaggtaggcgagatagggttgccaatttgtagaactaccaagaaggagagtgtgttgatgtccttctaaga 26308188  T
Q  444 ttca 447  Q
    ||||    
T  26308187 ttca 26308184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 17470282 - 17470364
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacct 108  Q
    |||| |||||||||||||||||| |  | |||||||||||||  |||||||| | | |||||||| ||||| |||||||||||    
T  17470282 ggtaagttttatttcttttgtaattactttttagttaccatggataactaaatctttttaggctaaggttctaagatgaacct 17470364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 413
Target Start/End: Complemental strand, 17830792 - 17830722
Alignment:
Q  343 taataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccga 413  Q
    ||||||||| ||||||||| ||||| || | |||||||||||||| ||||| | |||||| ||||||||||    
T  17830792 taataacttcattcttctttcatccgtggtgaggtagacgagatatggttgcccgtttgttgaactaccga 17830722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 392
Target Start/End: Original strand, 23379641 - 23379694
Alignment:
Q  339 agcataataactttattcttcttacatccttgataaggtagacgagatagggtt 392  Q
    |||||| ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  23379641 agcatagtaactttatacttcttatatcctttgtaaggtagacgagatagggtt 23379694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 18751404 - 18751348
Alignment:
Q  53 tctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||||||||||| | || |||| ||| ||||| ||||||    
T  18751404 tctttagttaccatgagtaactaaaccctaattggataggattctaagataaacctc 18751348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 26121766 - 26121682
Alignment:
Q  25 aggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||  |  |||||||| || ||||||||||| ||| ||||||||| | | ||||| |||||||| ||||||||||||    
T  26121766 aggtatgtttttatctttttgtaatttgtctttagttacaatgtgtaactaaatctttttaggatagggttctaagatgaacctc 26121682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 19964360 - 19964309
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaac 78  Q
    |||| |||||||||||||| || ||||||||| |||| ||||||||||||||    
T  19964360 gtatattttatttcttttgaaatttatctttaattacgatgagtaactaaac 19964309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 23266203 - 23266120
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||  || ||| ||||||  ||| ||||||||| | | ||||| |||| ||| ||||||||||||    
T  23266203 ggtatgttttatttcttttgtactttgtctatagttattatgtgtaactaaatctttttaggttaggattctaagatgaacctc 23266120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 26308409 - 26308342
Alignment:
Q  218 ataaagatacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaa 285  Q
    |||||| |||||||| | |||||||| |||||||| ||||| |||| || |||||| |||||||||||    
T  26308409 ataaagttacttagggaggtgacatatctaatattggtgaatacctgcctgaatcaagaagtaactaa 26308342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 111914 - 111983
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaa 294  Q
    |||||||| | |||||||| |||||||| ||||| || | ||  ||||| ||||||||||||||||||||    
T  111914 tacttagggaggtgacataactaatattggtgaatacttgcctaaatcaagaagtaactaagataacaaa 111983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 15544830 - 15544773
Alignment:
Q  228 ttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaa 285  Q
    ||||||| |||||||| |||||||| ||| |||||||||  ||||| |||||||||||    
T  15544830 ttaggaaggtgacatatctaatattggtgcaaacctacctaaatcaggaagtaactaa 15544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 26252895 - 26252854
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatg 67  Q
    ||||||||||||||||||||||| || |||||| ||||||||    
T  26252895 ggtatgttttatttcttttgtaatttgtctttaattaccatg 26252854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 26253877 - 26253934
Alignment:
Q  20 tcttaaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaa 77  Q
    |||||| |||| ||||||||||||||||  || ||| | |||||||||||||||||||    
T  26253877 tcttaaagtatattttatttcttttgtattttgtctattgttaccatgagtaactaaa 26253934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 111706 - 111774
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggtt 95  Q
    |||||||||||||||||||||| || | |||| ||||||| |||||| ||  | | |||||||||||||    
T  111706 gtatgttttatttcttttgtaatttgtgtttaattaccataagtaaccaagtctttttaggctagggtt 111774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 423
Target Start/End: Complemental strand, 9521416 - 9521368
Alignment:
Q  376 gtagacga-gatagggttgtctgtttgtagaactaccgaaagtgagagt 423  Q
    |||||||| |||||||||||| ||||||||||||||||| || ||||||    
T  9521416 gtagacgatgatagggttgtccgtttgtagaactaccgagagggagagt 9521368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 20533373 - 20533433
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaa 285  Q
    |||||| ||| ||||||||| ||||||| ||| ||||||||  |||||| |||||||||||    
T  20533373 tacttacgaaggtgacatacttaatattggtgtaaacctacttgaatcaggaagtaactaa 20533433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 22920379 - 22920303
Alignment:
Q  33 tttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||| ||  || | ||||||||||||||||||||||| | | ||||| |||||||   |||||||||||    
T  22920379 tttatttcttttatagtttgtttttagttaccatgagtaactaaatctttttaggttagggttgttagatgaacctc 22920303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 338 - 451
Target Start/End: Original strand, 8446523 - 8446636
Alignment:
Q  338 tagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaactt 437  Q
    ||||||||||| |||| |||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||     
T  8446523 tagcataataattttactcttcttacatcattggtaagatagacgagatagggttgtccgtttgtagaactaccgaaagagagagtatgttgatgtactc 8446622  T
Q  438 ctaatattcataga 451  Q
    |||| |||||||||    
T  8446623 ctaagattcataga 8446636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 413
Target Start/End: Original strand, 12557028 - 12557203
Alignment:
Q  237 tgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaaataatggtaattaggaaaatattagtaacaacggagaat-aa 335  Q
    ||||||| |||||||| ||| ||||||||  |||||| ||||||||||||||||||||   | | |||||||  ||| | ||||||||||  ||||| ||    
T  12557028 tgacataactaatattggtgtaaacctactggaatcaggaagtaactaagataacaaat--acgataattagagaaaaagtagtaacaacaaagaattaa 12557125  T
Q  336 attagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccga 413  Q
    ||||||||||||||||||||||| || |||||||| ||||||| ||||||||||  || | |||||||||||||||||    
T  12557126 attagcataataactttattcttgtttcatccttggtaaggtatacgagataggactgccggtttgtagaactaccga 12557203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 12556813 - 12556893
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaac 106  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  12556813 ggtatgttttatttcttttgtaatttgtctttagttaccatgagtaactaaaccctattagggtggggttctaagatgaac 12556893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 25938011 - 25937930
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||||    
T  25938011 gtatgttttatttcttttgtaatttgtctttagttaccatgagtaactaaa-cctattagggtagggttataagatgaacctc 25937930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 31433538 - 31433456
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||| || |||||||||||||||  |||||||||||||||||| |||||||  ||||||||||||    
T  31433538 gtatgttttatttcttttgtaatttgtctttagttaccatggataactaaaccctattagggtagggtttaaagatgaacctc 31433456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 8502158 - 8502241
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||| ||||| | | |||||||||||||| ||||||||||||    
T  8502158 ggtatgttttatttcttttgtaatttgtctttagttaccatgggtagctaaatcttgttaggctagggttctaagatgaacctc 8502241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 26652345 - 26652428
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||| | | |||||||||||||  ||||| ||||||    
T  26652345 ggtatgttttatttcttttgtaatttgtctttagttaccatgagtaactaaatctttttaggctagggttttaagataaacctc 26652428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 34368771 - 34368688
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||||||||| | |||||||||  ||| ||||| ||||||    
T  34368771 ggtatgttttatttcttttgtaatttgtttttagttaccatgagtaactaaacctttttaggctagaattctaagataaacctc 34368688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 26292156 - 26292074
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacct 108  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||   | |||||| || |||| |||||||||||    
T  26292156 ggtatgttttatttcttttgtaatttgtctttagttaccatgagtaactaaatatttttaggccagagttctaagatgaacct 26292074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 31427198 - 31427116
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||| |||| ||  |||||| |||||    
T  31427198 gtatgttttatttattttgtaatttgtctttagttactatgagtaactaaaccctattagggtaggattttaagatgtacctc 31427116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 413
Target Start/End: Complemental strand, 18932930 - 18932850
Alignment:
Q  333 taaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccga 413  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||||| |||||| ||  | | |||||||||||||||||    
T  18932930 taaattggcatagtaactttattcttcttacatccttggtaaggtagatgagatatggcagcccgtttgtagaactaccga 18932850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 27870400 - 27870300
Alignment:
Q  332 ataaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgat 431  Q
    |||||||| |||| |||||||||||||||| ||| |||| |||||||||||||||| || || |  |||||||||||| ||| || |||| |||||||||    
T  27870400 ataaattaacatagtaactttattcttctttcattcttggtaaggtagacgagatatggctgcccctttgtagaactaacgagagggagaatatgttgat 27870301  T
Q  432 g 432  Q
    |    
T  27870300 g 27870300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 8446195 - 8446278
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||| ||||||||||||| || | ||||||||||||||| |||||||||||| |||| ||| |||  ||||||||||||    
T  8446195 ggtatgtttaatttcttttgtaatttgtgtttagttaccatgagcaactaaaccctaatagggtagagttttaagatgaacctc 8446278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 41789749 - 41789831
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||| || |||||||| | ||| ||||||||||   | |||||||||||||| ||||||||||||    
T  41789749 gtatgttttatttcttttgtaatttgtctttagtcatcattagtaactaaatttttttaggctagggttctaagatgaacctc 41789831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 13517050 - 13517099
Alignment:
Q  29 atgttttatttcttttgtaaattatctttagttaccatgagtaactaaac 78  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  13517050 atgttttatttcttttttaatttatctttagttaccatgagtaactaaac 13517099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 30682883 - 30682944
Alignment:
Q  30 tgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctag 91  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||| | |||||||||    
T  30682883 tgttttatttctattgtaatttgtctttagttaccatgagtaactaaacctttttaggctag 30682944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 34368576 - 34368503
Alignment:
Q  218 ataaagatacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataac 291  Q
    |||||| |||||||||||||||||||||||||||  || ||||| ||| ||||| | |||||||||||||||||    
T  34368576 ataaaggtacttaggaaagtgacatacctaatatcggttaaaacatactcgaattaagaagtaactaagataac 34368503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 18933212 - 18933156
Alignment:
Q  53 tctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||    
T  18933212 tctttagttaccatgggtaactaaagcctattagggtagggttctaagatgaacctc 18933156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 17181355 - 17181272
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||| |||||||||| ||| || |||||||||||||||||||||| || | | ||||| |||||||| |||||| |||||    
T  17181355 ggtatgttatatttcttttataatttgtctttagttaccatgagtaactcaatctttttaggttagggttctaagatgtacctc 17181272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 413
Target Start/End: Complemental strand, 34368462 - 34368383
Alignment:
Q  334 aaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccga 413  Q
    ||||||||||| | |||||||||||||| |||||||  |||||||||||||||| |||||  ||||||| || |||||||    
T  34368462 aaattagcatagttactttattcttctttcatcctttgtaaggtagacgagatatggttgcatgtttgttgacctaccga 34368383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 18933037 - 18932971
Alignment:
Q  224 atacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataa 290  Q
    ||||||||||| ||||||||  ||||||| ||||||| |||| ||||||| ||||||||||||||||    
T  18933037 atacttaggaaggtgacatatataatattggtgaaaatctactcgaatcaggaagtaactaagataa 18932971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 234 - 291
Target Start/End: Original strand, 8446408 - 8446465
Alignment:
Q  234 aagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataac 291  Q
    |||||||||||||| |||| ||||||||||| |||||| | |||||||||||||||||    
T  8446408 aagtgacatacctattattggtgaaaacctatccgaattaggaagtaactaagataac 8446465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 390
Target Start/End: Complemental strand, 25937797 - 25937647
Alignment:
Q  237 tgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaaataatggtaattaggaaaatattagtaacaacggagaat-aa 335  Q
    ||||||||| |||| | ||||||||||| |||||||| ||||||||||||| ||| |  | |   |||||||| ||| |||||||||  | | |||| ||    
T  25937797 tgacatacccaatactggtgaaaacctatccgaatcaggaagtaactaagacaacga--ttacaataattagggaaacattagtaacttcagggaattaa 25937700  T
Q  336 attagcataataactttattcttcttacatccttgataaggtagacgagataggg 390  Q
    |  |||||| |||||  ||||||||| |||||||| |||||||||||||||||||    
T  25937699 accagcatagtaact--attcttctttcatccttggtaaggtagacgagataggg 25937647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 27870704 - 27870621
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||| ||||||||||| ||||| || ||||| |||||||| |||||||||||  | |||| ||||| ||| ||||||||||||    
T  27870704 ggtatattttatttcttatgtaatttgtctttggttaccattagtaactaaacgtttttagcctaggattctaagatgaacctc 27870621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 498
Target Start/End: Original strand, 18545375 - 18545445
Alignment:
Q  430 atgaacttctaatattcatagacg-gggaacctttaagaccattgagaatttaag-taccctaatttaagt 498  Q
    |||||||||||| ||||||||| | ||||||||||| |||||||||||||||| |  ||||||||||||||    
T  18545375 atgaacttctaagattcatagaagagggaacctttatgaccattgagaatttaggaaaccctaatttaagt 18545445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 18922930 - 18922864
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataac 291  Q
    |||||||||| ||| ||||||||||||| ||| ||||||||| |||||| ||| ||| |||||||||    
T  18922930 tacttaggaaggtggcatacctaatattggtgcaaacctaccggaatcaggaaataattaagataac 18922864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 447
Target Start/End: Original strand, 32439645 - 32439759
Alignment:
Q  333 taaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatg 432  Q
    ||||| ||| || ||||||||||||||| | ||| ||  ||||||||| |||| | || |||||||||||||||||||    || ||||| |||||||||    
T  32439645 taaataagcttactaactttattcttctaaaatctttagtaaggtagatgagacaaggctgtctgtttgtagaactacaacgagggagagcatgttgatg 32439744  T
Q  433 aacttctaatattca 447  Q
    |||||| || |||||    
T  32439745 aacttcgaagattca 32439759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 20175244 - 20175179
Alignment:
Q  41 ttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaac 106  Q
    |||||||| || ||||||||||||||| ||| ||||| | | |||||||||||||| |||||||||    
T  20175244 ttttgtaatttgtctttagttaccatgtgtagctaaatctttttaggctagggttctaagatgaac 20175179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 27870476 - 27870439
Alignment:
Q  254 gtgaaaacctacccgaatcatgaagtaactaagataac 291  Q
    |||||||||||||||||||| |||||||||||||||||    
T  27870476 gtgaaaacctacccgaatcaggaagtaactaagataac 27870439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 481
Target Start/End: Original strand, 18553387 - 18553439
Alignment:
Q  430 atgaacttctaatattcatagacg-gggaacctttaagaccattgagaattta 481  Q
    |||||||||||| ||||||||| | ||||||||||| ||||||||||||||||    
T  18553387 atgaacttctaagattcatagatgagggaacctttaggaccattgagaattta 18553439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 27748258 - 27748310
Alignment:
Q  53 tctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaa 105  Q
    |||||||||||||||||||||||||||||| | || |||| ||| ||||||||    
T  27748258 tctttagttaccatgagtaactaaaccctaattgggtaggattctaagatgaa 27748310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 7707336 - 7707285
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaac 78  Q
    |||| ||||||||||||||||   ||||||| ||||||||||||||||||||    
T  7707336 gtatattttatttcttttgtattatatcttttgttaccatgagtaactaaac 7707285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 24089899 - 24089981
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||| | ||||| |||| |||| ||||||||||||| ||||||||| | | ||||| ||| |||| ||||||||||||    
T  24089899 ggtatgtttt-tatctttagtaatttatttttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctc 24089981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 27908149 - 27908231
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||| | ||||| |||| || ||||||||||||||| ||||||||| | | ||||| ||| |||| ||||||||||||    
T  27908149 ggtatgtttt-tatctttagtaatttgtctttagttaccatgtgtaactaaatctttttaggttagagttctaagatgaacctc 27908231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 17891057 - 17891003
Alignment:
Q  55 tttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||||   | ||||||| |||||| ||||||||||||    
T  17891057 tttagttaccatgagtaactaaatatttttaggctggggttctaagatgaacctc 17891003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 27419288 - 27419214
Alignment:
Q  35 tatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||| || |  |||||||||||| |||||||||   | |||| ||||||||| ||||||||||||    
T  27419288 tatttcttttgtaatttgttattagttaccatgggtaactaaatatttttagcctagggttctaagatgaacctc 27419214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 27420434 - 27420360
Alignment:
Q  35 tatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||| || |  |||||||||||| |||||||||   | |||| ||||||||| ||||||||||||    
T  27420434 tatttcttttgtaatttgttattagttaccatgggtaactaaatatttttagcctagggttctaagatgaacctc 27420360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 29985715 - 29985756
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatga 68  Q
    |||||||||||||||||||||| | || ||||||||||||||    
T  29985715 gtatgttttatttcttttgtaattgatttttagttaccatga 29985756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 32439370 - 32439422
Alignment:
Q  57 tagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||| |||||||||| | | |||||| ||||||| ||||||||||||    
T  32439370 tagttaccattagtaactaaatctttttaggccagggttctaagatgaacctc 32439422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 41669602 - 41669634
Alignment:
Q  50 ttatctttagttaccatgagtaactaaacccta 82  Q
    |||| ||||||||||||||||||||||||||||    
T  41669602 ttatttttagttaccatgagtaactaaacccta 41669634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 4e-33; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 191 - 446
Target Start/End: Original strand, 45264847 - 45265101
Alignment:
Q  191 tttcatctgaagtgaactaacactcaaataaagatacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataa 290  Q
    |||||| |||||||||| |||  | | |||| | |||||| ||||||||||||||||||||| |||||||||||||  |||||  |||||||||||||||    
T  45264847 tttcatttgaagtgaaccaactatgagataacggtacttaagaaagtgacatacctaatattggtgaaaacctaccttaatcagaaagtaactaagataa 45264946  T
Q  291 caaaataatggtaattaggaaaatattagtaacaacggagaa-taaattagcataataactttattcttcttacatccttgataaggtagacgagatagg 389  Q
    |  |||||   |||||||| ||||| || |||| |  ||||| | ||||| || | |||||||||||||||| |||||||| ||| |||||||||||| |    
T  45264947 c-gaataacaataattagggaaatagtaataaccatagagaattgaattaccacagtaactttattcttctttcatccttggtaaagtagacgagatatg 45265045  T
Q  390 gttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattc 446  Q
     ||| | ||||||||||| ||| | || |||||||| |||| |||||||||||||||    
T  45265046 attggccgtttgtagaaccaccaagag-gagagtatattgacgaacttctaatattc 45265101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 499
Target Start/End: Complemental strand, 26008873 - 26008598
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaaataatggtaattaggaaaatattagtaaca 324  Q
    |||||||||| ||| ||| ||||||||| ||  |||||||||||||||| ||||||||||| |||||  | | |||||||||||||||| | |||||||     
T  26008873 tacttaggaaggtggcatccctaatattggtacaaacctacccgaatcaggaagtaactaatataacggact-atggtaattaggaaaaca-tagtaact 26008776  T
Q  325 acggagaa-taaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagt 423  Q
     | | ||| ||||| |  ||| |||||||||||||||| |||||||  ||||||| ||||||||||| ||    |||||||||||||||| |  |||| |    
T  26008775 tcagtgaattaaatcattatagtaactttattcttctttcatccttagtaaggtacacgagatagggatgctcatttgtagaactaccgacaaggagaat 26008676  T
Q  424 atgttgatgaacttctaata-ttcatagacg-gggaacctttaagaccattgagaatttaagtaccctaatttaagtc 499  Q
    |||||||||  ||||||| | || | | ||| |||||||||||||||||||||||||||| | ||| |||||||||||    
T  26008675 atgttgatgtccttctaagatttaacaaacgagggaacctttaagaccattgagaatttaggaaccataatttaagtc 26008598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 25597098 - 25597152
Alignment:
Q  28 tatgttttatttcttttgtaaattatctttagttaccatgagtaactaaacccta 82  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  25597098 tatgttttatttcttttgtaatttttctttagttaccatgagtaactaaacccta 25597152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 410
Target Start/End: Complemental strand, 17972878 - 17972801
Alignment:
Q  333 taaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactac 410  Q
    ||||| |||||| ||||||||||||||||||||||||| | |||||||||||||| ||||| | |||| |||||||||    
T  17972878 taaatcagcatagtaactttattcttcttacatccttggtgaggtagacgagataaggttgcccgtttttagaactac 17972801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 26009076 - 26009015
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattagg 87  Q
    ||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||||||    
T  26009076 ggtatgttttatttcttttgtaatttgtctttagttgacatgagtaactaaaccctattagg 26009015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 28318377 - 28318317
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattag 86  Q
    ||||||||||| ||||||||||| || |||||||||||||||||||||||||| |||||||    
T  28318377 ggtatgttttacttcttttgtaatttgtctttagttaccatgagtaactaaactctattag 28318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 17973184 - 17973105
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaa 105  Q
    ||||||||||||||||||||||| || ||||||||||||||||| | |||||||| |||| | |||||||  ||||||||    
T  17973184 ggtatgttttatttcttttgtaatttttctttagttaccatgagaagctaaaccccattaaggtagggttttaagatgaa 17973105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 15059172 - 15059254
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacct 108  Q
    |||||||||||||||| |||||| || ||||||||||||||||||||||| | | | ||||||||  |||| |||||||||||    
T  15059172 ggtatgttttatttctcttgtaatttgtctttagttaccatgagtaactagatctttttaggctacagttctaagatgaacct 15059254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 24905606 - 24905523
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||| ||||||||||||||||| || | |||||||| |||| ||||||||| | | ||| |||||||||| ||||||||||||    
T  24905606 ggtatattttatttcttttgtaacttgtttttagttatcatgggtaactaaatctttttatgctagggttctaagatgaacctc 24905523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 5856166 - 5856084
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||| ||||||||||  | ||||||||||||||||||||||| | | | |||||||||  ||| ||||||||||||    
T  5856166 gtatgttttatatcttttgtaacatttctttagttaccatgagtaactacatctttttaggctagatttctaagatgaacctc 5856084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 18829579 - 18829497
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacct 108  Q
    ||||||||||||||||||||||| |||||||| |||||| || ||||||||  | | ||||| |||||||| |||| ||||||    
T  18829579 ggtatgttttatttcttttgtaatttatcttttgttaccttgcgtaactaattctttttagggtagggttctaagacgaacct 18829497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 357 - 447
Target Start/End: Original strand, 24119177 - 24119267
Alignment:
Q  357 ttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattca 447  Q
    ||||| ||||| || |||||||||||||||||||||| | |||||||||||||  || || |||||| ||||||||  ||||||| |||||    
T  24119177 ttctttcatccctggtaaggtagacgagatagggttgcccgtttgtagaactatagagagggagagtgtgttgatgtccttctaagattca 24119267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 24114907 - 24114958
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaa 77  Q
    |||||||||||| |||||||||| || |||||||||| ||||||||||||||    
T  24114907 ggtatgttttatgtcttttgtaatttgtctttagttatcatgagtaactaaa 24114958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 24519673 - 24519752
Alignment:
Q  30 tgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||| ||||||||  || ||||||||||||||| | ||||||| | | |||||||||||||  ||||||||||||    
T  24519673 tgttttattccttttgtagtttgtctttagttaccatgtgcaactaaatctttttaggctagggttttaagatgaacctc 24519752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 24851653 - 24851600
Alignment:
Q  53 tctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaac 106  Q
    |||||||||||||||||||||||||   | |||||||||||||| |||||||||    
T  24851653 tctttagttaccatgagtaactaaatttttttaggctagggttctaagatgaac 24851600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 19265182 - 19265100
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||| | |||||||||| || | ||||||||||||| ||||||||| | | ||||| ||| |||| ||||||||||||    
T  19265182 ggtatgtttt-tatcttttgtaatttgtttttagttaccatgtgtaactaaatctttttaggttagcgttctaagatgaacctc 19265100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 12565707 - 12565661
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaac 73  Q
    |||||||||||||||||||||| || | |||||||| ||||||||||    
T  12565707 gtatgttttatttcttttgtaatttgtttttagttatcatgagtaac 12565661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 18447615 - 18447669
Alignment:
Q  55 tttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||| ||||||||||| | ||||| ||| |||| ||||||||||||    
T  18447615 tttagttaccatgtgtaactaaacctttttaggttagagttctaagatgaacctc 18447669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 410
Target Start/End: Original strand, 29381822 - 29381860
Alignment:
Q  372 taaggtagacgagatagggttgtctgtttgtagaactac 410  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  29381822 taaggtagacgagatagagttgactgtttgtagaactac 29381860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 481
Target Start/End: Complemental strand, 17970028 - 17969911
Alignment:
Q  365 tccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattcatagacg-gggaaccttt 463  Q
    |||||| || || ||||||||||||||| | |||||||||||||||| | |   ||| |||| ||||| |||||||| ||||||| | | ||||| ||||    
T  17970028 tccttggtatggaagacgagatagggttatatgtttgtagaactaccaagatgaagaatatgatgatgtacttctaagattcataaatgtgggaaacttt 17969929  T
Q  464 aagaccattgagaattta 481  Q
    | ||| | ||||||||||    
T  17969928 aggactaatgagaattta 17969911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 410
Target Start/End: Original strand, 13314450 - 13314494
Alignment:
Q  366 ccttgataaggtagacgagatagggttgtctgtttgtagaactac 410  Q
    ||||| ||||||||||||||||||| |  ||||||||||||||||    
T  13314450 ccttggtaaggtagacgagatagggcttcctgtttgtagaactac 13314494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 17977664 - 17977584
Alignment:
Q  29 atgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||   | || ||||||||||||||| ||||||||| | | ||| ||||| |||| ||||| ||||||    
T  17977664 atgttttatttcttttactatttgtctttagttaccatgtgtaactaaatctttttaagctagagttctaagataaacctc 17977584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 31015012 - 31014980
Alignment:
Q  50 ttatctttagttaccatgagtaactaaacccta 82  Q
    |||||||||||||| ||||||||||||||||||    
T  31015012 ttatctttagttacaatgagtaactaaacccta 31014980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 481
Target Start/End: Original strand, 33655359 - 33655496
Alignment:
Q  345 ataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatat 444  Q
    ||||||||| |||||||| ||| ||| |||||||| ||||||| ||||| |  |||||||||||||||| ||  ||||||||||||||||||||||| ||    
T  33655359 ataactttactcttcttatatctttgctaaggtagtcgagatatggttgccattttgtagaactaccgagaggaagagtatgttgatgaacttctaagat 33655458  T
Q  445 tcatagacg-gggaacctttaagaccattgagaattta 481  Q
    ||||||||| |  || ||||| ||||||||||||||||    
T  33655459 tcatagacgagtcaatctttaggaccattgagaattta 33655496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 14726571 - 14726488
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||||||| ||| ||||||||| |||| ||||||||||||    
T  14726571 ggtatgttttatttcttttgtaatttgtttttagttaccatgagtaactaaatccttttaggctagtgttctaagatgaacctc 14726488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 359 - 453
Target Start/End: Original strand, 26214881 - 26214974
Alignment:
Q  359 cttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattcatagacg 453  Q
    ||||||| |||| |||||||||||||||||||||||| ||||||| ||||||||| || |||| ||| |||||| |||||||| |||||||||||    
T  26214881 cttacattcttggtaaggtagacgagatagggttgtccgtttgtataactaccgagagggagactat-ttgatgtacttctaaaattcatagacg 26214974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 9387077 - 9386994
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||||  | ||||||||||| ||||||||||||||  | ||||| |||||||| ||||||||||||    
T  9387077 ggtatgttttatttcttttgtaatatgtctttagttacaatgagtaactaaacttttttaggttagggttctaagatgaacctc 9386994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 10504600 - 10504518
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||| |||||||||||| ||||| ||||||||| | | ||||||||| |||  ||||||||||||    
T  10504600 gtatgttttatttcttttgtaatttatctttagttgccatgtgtaactaaatctttttaggctagcgttataagatgaacctc 10504518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 26297477 - 26297395
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| |    |||||||| ||||||||||||    
T  26297477 gtatgttttatttcttttgtaatttatctttggttaccatgagtaactcaaccctaattaaatagggttctaagatgaacctc 26297395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 32759463 - 32759377
Alignment:
Q  23 taaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||||||| || |||||||||||| || |||| |||| | | ||||| |||||||| ||||||||||||    
T  32759463 taaggtatgttttatttcttttgtaatttgtctttagttaccgtgtgtaagtaaatctttttaggatagggttctaagatgaacctc 32759377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 492
Target Start/End: Complemental strand, 10504265 - 10504126
Alignment:
Q  354 ttcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatattc-atagac 452  Q
    |||||||| |||| ||| |||||||||||||||||||||| |  |||||||||||||||| || |||||| ||||||||   |||||| |||| ||||||    
T  10504265 ttcttctttcatcattggtaaggtagacgagatagggttgcccctttgtagaactaccgagagggagagtgtgttgatgtctttctaagattcaatagac 10504166  T
Q  453 g-gggaacctttaagaccattgagaatttaagtaccctaat 492  Q
    |  || ||||||| || ||||||||||||| | ||||||||    
T  10504165 gatggtacctttagga-cattgagaatttaggaaccctaat 10504126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 3357582 - 3357500
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || |||||||||| |||| ||||||||| | | |||||||||| ||| ||||||||||||    
T  3357582 ggtatgttttatttcttttgtaatttgtctttagtta-catgtgtaactaaatctttttaggctaggtttctaagatgaacctc 3357500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 34479543 - 34479465
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaa 105  Q
    ||||| |||||||||||||||| || |||||||||||||||||||| |||||| | ||||| | |||||| ||||||||    
T  34479543 gtatgctttatttcttttgtaatttgtctttagttaccatgagtaaataaacctttttagggttgggttctaagatgaa 34479465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 16167218 - 16167137
Alignment:
Q  28 tatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||| |||||| || || ||||||||||||| ||| | |||||||| ||||| ||||| ||||||    
T  16167218 tatgttttatttcttttgtaatttatctctacttgccatgagtaactatacctttttaggctacggttctaagataaacctc 16167137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 432
Target Start/End: Complemental strand, 9386767 - 9386668
Alignment:
Q  333 taaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatg 432  Q
    ||||| |||||| ||| |||||| ||||| |||| ||  ||||||||||||||||||| ||  |||||||||||||| ||| || |||| ||||||||||    
T  9386767 taaatcagcatagtaattttattattctttcatcatttgtaaggtagacgagatagggctgattgtttgtagaactatcgagagggagaatatgttgatg 9386668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 10821628 - 10821577
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaa 77  Q
    ||||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  10821628 ggtatgttttatttcttttgtaatttgtctttagttaccaagagtaactaaa 10821577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 422
Target Start/End: Original strand, 15613547 - 15613622
Alignment:
Q  347 aactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagag 422  Q
    ||||| ||||||||| |||||||| ||||| ||||||||||||||||||  |||| ||||||||||| || |||||    
T  15613547 aacttcattcttctttcatccttggtaaggaagacgagatagggttgtccatttgcagaactaccgagagagagag 15613622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 26214528 - 26214587
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctatta 85  Q
    ||||| ||||||||||||||||| || ||||| ||||||||||||||||||||| |||||    
T  26214528 ggtatattttatttcttttgtaatttgtcttttgttaccatgagtaactaaaccatatta 26214587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 441
Target Start/End: Complemental strand, 34479193 - 34479124
Alignment:
Q  372 taaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaa 441  Q
    ||||||||||||||||||| || | ||||||||||||||| | || |||| ||||||||||  |||||||    
T  34479193 taaggtagacgagatagggctgcccgtttgtagaactaccaatagcgagaatatgttgatgtccttctaa 34479124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 2587714 - 2587646
Alignment:
Q  41 ttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||| || | ||||||||||||| ||||||||| |   |||||||||||||| ||||||||||||    
T  2587714 ttttgtaatttgtttttagttaccatgggtaactaaatctgtttaggctagggttctaagatgaacctc 2587646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 33655202 - 33655294
Alignment:
Q  199 gaagtgaactaacactcaaataaagatacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataac 291  Q
    ||||||||| ||| || | |||| | || |||| ||||| |||||||||||||   |||||||||||  || |||||||||||||||||||||    
T  33655202 gaagtgaaccaaccctgagataacggtaattagaaaagtaacatacctaatatcaatgaaaacctacatgactcatgaagtaactaagataac 33655294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 14882365 - 14882314
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaa 77  Q
    |||||||||||||||||||  || || |||||||||||||| ||||||||||    
T  14882365 ggtatgttttatttcttttagaatttgtctttagttaccatcagtaactaaa 14882314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 22537597 - 22537679
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||| ||||||||||||||| || | |||  ||| |||||||||||||||||| || || || ||||| ||||||||||||    
T  22537597 ggtatgtattatttcttttgtaatttgtttttcattaacatgagtaactaaaccctgtt-ggatatggttctaagatgaacctc 22537679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 17768944 - 17768986
Alignment:
Q  30 tgttttatttcttttgtaaattatctttagttaccatgagtaa 72  Q
    ||||||||||| ||||||| |||| ||||||||||||||||||    
T  17768944 tgttttatttcctttgtaatttatttttagttaccatgagtaa 17768986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 32759254 - 32759188
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataac 291  Q
    |||||||| | ||||||||||||||||| ||||| || |||| ||||||  || |||||||||||||    
T  32759254 tacttagggaggtgacatacctaatattggtgaatacatacctgaatcagaaaataactaagataac 32759188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 34479324 - 34479278
Alignment:
Q  239 acatacctaatatttgtgaaaacctacccgaatcatgaagtaactaa 285  Q
    |||||||||||||| ||||| ||||||| |||||| |||||||||||    
T  34479324 acatacctaatattggtgaatacctacctgaatcaagaagtaactaa 34479278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 15550424 - 15550347
Alignment:
Q  33 tttatttcttttgtaaatta-tctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||| ||  ||||| |||||||| |||| |||||||||| | || |||||||  ||||||||||||    
T  15550424 tttatttcttttgtaattttgtcttttgttaccataagtagctaaaccctaattgggtagggttttaagatgaacctc 15550347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 15613296 - 15613373
Alignment:
Q  32 ttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||| |||| || |||||||||| ||||||| |||||| | | ||||| | |||||| | ||||||||||    
T  15613296 ttttatttctttcgtaatttgtctttagttatcatgagttactaaatctttttaggatggggttctatgatgaacctc 15613373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 14072819 - 14072775
Alignment:
Q  366 ccttgataaggtagacgagatagggttgtctgtttgtagaactac 410  Q
    ||||| |||||||||||| |||||| |||| ||||||||||||||    
T  14072819 ccttggtaaggtagacgacatagggatgtccgtttgtagaactac 14072775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 24320028 - 24319948
Alignment:
Q  30 tgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagg-gttcgaagatgaacctc 109  Q
    ||||||||||||| ||| | |||| ||||| || ||||||||||||||| ||| | || |||| |||| ||||||||||||    
T  24320028 tgttttatttcttatgttatttatttttaggtaacatgagtaactaaactctaattggttaggagttctaagatgaacctc 24319948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 323
Target Start/End: Complemental strand, 11533325 - 11533220
Alignment:
Q  216 aaataaagatacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaaataatggtaattaggaaaata 315  Q
    |||||| | |||||||||| |||||| |||||||||| |||||||||||||||||||| |||||||||||||||||   || | |||||||||||||| |    
T  11533325 aaataacggtacttaggaaggtgacaaacctaatattggtgaaaacctacccgaatcaggaagtaactaagataac--gattacggtaattaggaaaaca 11533228  T
Q  316 ttagtaac 323  Q
    ||||||||    
T  11533227 ttagtaac 11533220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 338 - 481
Target Start/End: Original strand, 20339279 - 20339417
Alignment:
Q  338 tagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaactt 437  Q
    ||||||||||| |||| ||||||||||| |||| |||||||||||| ||| || || | |||||||||||||      | | ||||||||||||||||||    
T  20339279 tagcataataattttactcttcttacattcttggtaaggtagacgatatatggatgcccgtttgtagaacta------gggggagtatgttgatgaactt 20339372  T
Q  438 ctaatattcatagacg-gggaacctttaagaccattgagaattta 481  Q
    |||  |||||||||||  |||||||||| ||||||||||||||||    
T  20339373 ctacgattcatagacgacggaacctttaggaccattgagaattta 20339417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 51119163 - 51119224
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattagg 87  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  51119163 ggtatgttttatttcttttgtaatttgtctttagttaccatgagtaactaaaccctattagg 51119224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 26092317 - 26092234
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||| |||||||| |||| |||| ||||||||||||| |||||| ||||||| |||||||| ||||||||||||    
T  26092317 ggtatgttttatttattttgtaatttatatttaattaccatgagtaaataaaccttattagggtagggttctaagatgaacctc 26092234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 20886244 - 20886162
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacct 108  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||   | |||||||| ||||| |||||||||||    
T  20886244 ggtatgttttatttcttttgtaatttgtctttagttaccatgagtaactaaatatttttaggctaaggttctaagatgaacct 20886162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 432
Target Start/End: Complemental strand, 26091990 - 26091904
Alignment:
Q  346 taactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatg 432  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||| ||| | ||||||||||||||||| || |||| || |||||||    
T  26091990 taactttattcttcttacatccttggtaagttaggcgagataggattgcccgtttgtagaactaccgagagggagaataagttgatg 26091904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 20338952 - 20339035
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||| |||||||| ||  |||| ||||||||||||||||||||||||||||  |||||||| || | |||||||    
T  20338952 ggtatgttttatttattttgtaatttgcctttggttaccatgagtaactaaaccctattagattagggttctaacacgaacctc 20339035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 23055270 - 23055344
Alignment:
Q  32 ttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaac 106  Q
    ||||||||||||||||| || ||||||||||||||||||||||||  | | |||||||||||||  |||||||||    
T  23055270 ttttatttcttttgtaatttgtctttagttaccatgagtaactaagtctttttaggctagggttgtaagatgaac 23055344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 26092142 - 26092047
Alignment:
Q  196 tctgaagtgaactaacactcaaataaagatacttaggaaagtgacat-acctaatatttgtgaaaacctacccgaatcatgaagtaactaagataac 291  Q
    |||||||||||||| | || |||||| | |||||||||| ||||||| | |||||||| ||| |||||||||||||||| ||| |||||||||||||    
T  26092142 tctgaagtgaacta-cgctgaaataacggtacttaggaaggtgacattatctaatattggtgtaaacctacccgaatcaagaaataactaagataac 26092047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 28369481 - 28369558
Alignment:
Q  32 ttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||| ||| || ||||||||||||||| ||||||||| | | ||||||| |||||| ||||| ||||||    
T  28369481 ttttatttcttttataatttctctttagttaccatgggtaactaaatctttttaggcttgggttctaagattaacctc 28369558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 28377299 - 28377376
Alignment:
Q  32 ttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||| ||| || ||||||||||||||| ||||||||| | | ||||||| |||||| ||||| ||||||    
T  28377299 ttttatttcttttataatttctctttagttaccatgggtaactaaatctttttaggcttgggttctaagattaacctc 28377376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 28385121 - 28385198
Alignment:
Q  32 ttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||| ||| || ||||||||||||||| ||||||||| | | ||||||| |||||| ||||| ||||||    
T  28385121 ttttatttcttttataatttctctttagttaccatgggtaactaaatctttttaggcttgggttctaagattaacctc 28385198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 21019026 - 21019106
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaac 106  Q
    |||||||||||| |||||||||| || ||||| ||||||||||||||||||| | | | || ||||||||  |||||||||    
T  21019026 ggtatgttttatatcttttgtaatttgtctttggttaccatgagtaactaaatcttttgagactagggttttaagatgaac 21019106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 21084237 - 21084163
Alignment:
Q  34 ttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||| || |||||| ||||||||| |||||| ||| ||||| | |||||||| ||||||||||||    
T  21084237 ttatttcttttgtaatttgtctttaattaccatgactaactagaccttattatg-tagggttctaagatgaacctc 21084163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 410
Target Start/End: Original strand, 30510515 - 30510553
Alignment:
Q  372 taaggtagacgagatagggttgtctgtttgtagaactac 410  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  30510515 taaggtagacgagatagagttgtctgtttgtagaactac 30510553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 32466093 - 32466173
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacct 108  Q
    ||||||||||||||||||||   || ||||||||| |||||| ||||||||||||| | || || ||||| |||||||||||    
T  32466093 gtatgttttatttcttttgtggtttttctttagttgccatgaataactaaaccctaattggata-ggttccaagatgaacct 32466173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 20339159 - 20339223
Alignment:
Q  229 taggaaagtgacatacctaatatttg-tgaaaacctacccgaatcatgaagtaactaagataaca 292  Q
    ||||||||||||||  ||||| |||| ||||||||||| | ||||| ||||||||||||||||||    
T  20339159 taggaaagtgacatgtctaatgtttggtgaaaacctactcaaatcaggaagtaactaagataaca 20339223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 820534 - 820616
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||| |||||||||||| || | ||| ||||||||| ||||||||| | | | |||||||||||| || |||||||||    
T  820534 ggtatgtttt-tttcttttgtaatttgtgtttggttaccatgggtaactaaatcttctcaggctagggttctaacatgaacctc 820616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 451
Target Start/End: Complemental strand, 6290484 - 6290367
Alignment:
Q  333 taaattagcataataactttattcttcttacatccttgataaggtagacga-gatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgat 431  Q
    ||||| |||| |||||||| ||||| ||  || ||||| |||||||||||  ||||| | |||||||||||||||||||| | |  ||||||||||| ||    
T  6290484 taaatcagcacaataacttcattctactcgca-ccttggtaaggtagacgctgatagagatgtctgtttgtagaactaccaagaaggagagtatgtt-at 6290387  T
Q  432 gaacttctaatattcataga 451  Q
    | |||||||| |||||||||    
T  6290386 gcacttctaagattcataga 6290367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 10950628 - 10950577
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaac 78  Q
    |||||||||||||||||| ||| || |||||||||| ||| |||||||||||    
T  10950628 gtatgttttatttcttttataatttgtctttagttaacataagtaactaaac 10950577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 27820152 - 27820199
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaact 74  Q
    ||||||||||||||||||| || || ||||||||||||| ||||||||    
T  27820152 gtatgttttatttcttttgcaatttgtctttagttaccacgagtaact 27820199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 108
Target Start/End: Complemental strand, 6290856 - 6290803
Alignment:
Q  55 tttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacct 108  Q
    ||||||||||||||||||||||| |   |||||||||||||| ||||| |||||    
T  6290856 tttagttaccatgagtaactaaatctctttaggctagggttctaagattaacct 6290803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 451
Target Start/End: Complemental strand, 26335818 - 26335741
Alignment:
Q  375 ggtagacgagatagggttgtctgtttgtagaactaccga-aagtgagagtatgttgatgaacttctaatattcataga 451  Q
    ||||||||||||||||||| |  | |||| ||| | ||| ||| ||||||||||||||| |||||||| |||||||||    
T  26335818 ggtagacgagatagggttgcccatatgtataaccatcgagaagagagagtatgttgatgtacttctaagattcataga 26335741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 18473865 - 18473937
Alignment:
Q  218 ataaagatacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataa 290  Q
    |||| |||| ||||| ||||||||||| ||||||| ||| ||||||    |||||| ||||||||||||||||    
T  18473865 ataacgataattagggaagtgacatacttaatattggtgcaaacctgtatgaatcaggaagtaactaagataa 18473937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 21302560 - 21302516
Alignment:
Q  366 ccttgataaggtagacgagatagggttgtctgtttgtagaactac 410  Q
    ||||| ||||||||||||||||||||||   ||||||||||||||    
T  21302560 ccttggtaaggtagacgagatagggttgctcgtttgtagaactac 21302516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 23055598 - 23055666
Alignment:
Q  355 tcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagt 423  Q
    ||||||| |||||||| |||||||||| |||||  || | ||||||||||||||| ||| || ||||||    
T  23055598 tcttctttcatccttggtaaggtagaccagataaagtcgcctgtttgtagaactaacgagagagagagt 23055666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 23438 - 23355
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || |||||||||||||||||| ||||| || | |||||||||||||| ||||||||||||    
T  23438 ggtatgttttatttcttttgtaatttgtctttagttaccatgagtgactaaccctttttaggctagggttctaagatgaacctc 23355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 447
Target Start/End: Complemental strand, 23235 - 23013
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaaataatggtaattaggaaaatattagtaaca 324  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |  ||| |||||||||| ||| ||   | ||     
T  23235 tacttaggaaggtgacatacctaatattggtgaaaacctaaccgaatcaggaagtaagtaagataacgat-taaaggtaattagggaaacatgt-tgact 23138  T
Q  325 acggagaataaattagcata--ataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagag 422  Q
     |      |||||  |||||  |||||||||||||| || |||||||| ||||||||||||| || ||||||| |||| ||||||| |||| || ||||     
T  23137 tcattacttaaatctgcatagtataactttattcttatttcatccttggtaaggtagacgagctatggttgtccgtttatagaacttccgagagggagaa 23038  T
Q  423 tatgttgatgaacttctaatattca 447  Q
    ||||||||||  ||| |||||||||    
T  23037 tatgttgatgcccttgtaatattca 23013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 7613149 - 7613066
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||| || ||||| ||||||||||||    
T  7613149 ggtatgttttatttcatttgtaatttatatttagttaccatgagtaactaaaccttattagggtatggttctaagatgaacctc 7613066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 11520155 - 11520241
Alignment:
Q  23 taaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||||||| || |||||||||||||||| ||| |||||| | ||| |||||||||| ||||||||||||    
T  11520155 taaggtatgttttatttcttttgtaatttgtctttagttaccatgaataattaaacctttttatgctagggttctaagatgaacctc 11520241  T

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Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 15049204 - 15049290
Alignment:
Q  23 taaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | | || || |||||||| ||||||||||||    
T  15049204 taaggtatgctttatttcttttgtaatttatctttagttaccatgagtaactaaatcttttttggatagggttctaagatgaacctc 15049290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 15105220 - 15105134
Alignment:
Q  23 taaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | | || || |||||||| ||||||||||||    
T  15105220 taaggtatgctttatttcttttgtaatttatctttagttaccatgagtaactaaatcttttttggatagggttctaagatgaacctc 15105134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 228 - 400
Target Start/End: Complemental strand, 10087679 - 10087507
Alignment:
Q  228 ttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaaataatggtaattaggaaaatattagtaacaacg 327  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||  | | ||||||||| ||| | | |||||  |     
T  10087679 ttagggaagtgacatacctaatattggtgaaaacctacccgaatcaggaagtaactaagataacgaaccact-gtaattagggaaacaatggtaacttca 10087581  T
Q  328 gagaa-taaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgttt 400  Q
    | ||| ||||  | ||   |||||||||||||||| ||| |||| ||||||||| ||||||||||||| |||||    
T  10087580 gggaattaaaccaacaccgtaactttattcttctttcatacttggtaaggtagaagagatagggttgtatgttt 10087507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 19547737 - 19547817
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaac 106  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||| || | |||||||| ||||| |||||||||    
T  19547737 ggtatgttttatttcttttgtaatttgtctttagttaccatgagtaactaatcctttttaggctaaggttctaagatgaac 19547817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 10087884 - 10087801
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||| |||| ||  ||||||||||||    
T  10087884 ggtatgttttatttcttttgtaatttgtctttagttaccataagtaactaaatcctattagggtaggattataagatgaacctc 10087801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 346 - 498
Target Start/End: Complemental strand, 7612828 - 7612674
Alignment:
Q  346 taactttattcttctta-catccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttctaatat 444  Q
    |||||||| |||||||  ||||||||||||||||||||||| || | || | ||||||||||||| ||| |  |||| |||||||||| |||||||| ||    
T  7612828 taactttactcttcttttcatccttgataaggtagacgagacagagctgcccgtttgtagaactatcgagatggagaatatgttgatgtacttctaagat 7612729  T
Q  445 tcataga-cggggaacctttaagaccattgagaatttaagtaccctaatttaagt 498  Q
    |||||||   ||||||||||| ||||||||  |||||| | || |||||||||||    
T  7612728 tcatagataagggaacctttaggaccattggaaatttaggaactctaatttaagt 7612674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 1832598 - 1832681
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||||||||||||| || |||||||||||||||| |||||||  | | |||||||||||||| |||| |||||||    
T  1832598 ggtatgttttatttcttttgtaatttgtctttagttaccatgaataactaactctttttaggctagggttctaagacgaacctc 1832681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 5529387 - 5529308
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaa 105  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||||||| | | ||||| |||||||| ||||||||    
T  5529387 ggtatgttttatttcttttttaatttgtctttagttaccatgagtaactaaatctttttaggttagggttctaagatgaa 5529308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 9264023 - 9264102
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaa 105  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||   |  ||||||||||||| ||||||||    
T  9264023 ggtatgttttatttcttttgtaatttgtctttagttaccatgagtaactaaatatttataggctagggttctaagatgaa 9264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 234 - 411
Target Start/End: Complemental strand, 17661217 - 17661040
Alignment:
Q  234 aagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaaataatggtaattaggaaaatattagtaacaacggagaa- 332  Q
    ||||||| ||||||||||| ||| |||||||||  ||||| ||||||||||||||||| |  | | |||||||||| ||||  |||||||   || | |     
T  17661217 aagtgacttacctaatattggtgtaaacctacctaaatcaggaagtaactaagataacga--ttacggtaattagggaaattgtagtaactttgggggac 17661120  T
Q  333 -taaattagcataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactacc 411  Q
     ||||| |||||| ||||||||||||||||  ||||||| |||| |||||||||||||  || | |||||||||| ||||    
T  17661119 ttaaatcagcatagtaactttattcttcttttatccttggtaagatagacgagataggactgcccgtttgtagaaatacc 17661040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 10782969 - 10782886
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||| |||||||| || ||||||||||| |||| ||||||||   | |||||||||||||| ||||||||||||    
T  10782969 ggtatgttttatttattttgtaatttttctttagttactatgattaactaaatatttttaggctagggttctaagatgaacctc 10782886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 20316843 - 20316896
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaacc 79  Q
    ||||| ||||||||||||||||| || |||||||||||||||||||||||||||    
T  20316843 ggtatcttttatttcttttgtaatttttctttagttaccatgagtaactaaacc 20316896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 12838835 - 12838914
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaac 106  Q
    |||||||||||||||||| |||| || |||||||||||||||||| |||||| | | |||||||||| ||| |||||||||    
T  12838835 ggtatgttttatttcttt-gtaatttgtctttagttaccatgagtcactaaatctttttaggctaggattctaagatgaac 12838914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 23083060 - 23082980
Alignment:
Q  29 atgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||| || | ||||||||||||||| ||||||| | | ||||||| |||||| ||||| ||||||    
T  23083060 atgttttatttcttttgtaatttgtttttagttaccatgagaaactaaatctttttaggcttgggttctaagattaacctc 23082980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 9053388 - 9053309
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaa 105  Q
    |||||||||||| |||||||||| ||||||||||||||||| | |||||||| | | |||||||||| ||  ||||||||    
T  9053388 ggtatgttttatgtcttttgtaatttatctttagttaccattaataactaaatctttttaggctaggattttaagatgaa 9053309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 23975244 - 23975169
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaaga 101  Q
    ||||||||||||||||||||||| || ||||||||| ||||| ||||||||| | | ||| |||||||||| ||||    
T  23975244 ggtatgttttatttcttttgtaatttgtctttagttgccatgtgtaactaaatctttttaagctagggttctaaga 23975169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 28572510 - 28572459
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaac 78  Q
    |||||||||||||||||||||| || |||||||||||||||||||| |||||    
T  28572510 gtatgttttatttcttttgtaatttgtctttagttaccatgagtaattaaac 28572459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 4214575 - 4214625
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaa 76  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  4214575 ggtatgttttatttcttttgtaatttatatttagttcccatgagtaactaa 4214625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 12216154 - 12216204
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaa 77  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  12216154 gtatgttttatttcttttgtaattcgtctttagttaccatgagtaactaaa 12216204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 18746354 - 18746404
Alignment:
Q  28 tatgttttatttcttttgtaaattatctttagttaccatgagtaactaaac 78  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  18746354 tatgttttatttcttctgtaatttgtctttagttaccatgagtaactaaac 18746404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 341 - 447
Target Start/End: Original strand, 19548049 - 19548154
Alignment:
Q  341 cataataactttattcttcttacatccttgataaggtagacgagatagggttgtctgtttgtagaactaccgaaagtgagagtatgttgatgaacttcta 440  Q
    |||| ||||||||||||| || |||||||| |||||| ||||| ||||||||| |  |||||| |||||||||| || ||| ||||||||||  ||||||    
T  19548049 catagtaactttattcttttttcatccttggtaaggttgacgatatagggttgcccatttgtaaaactaccgaaggt-agaatatgttgatgtccttcta 19548147  T
Q  441 atattca 447  Q
    | |||||    
T  19548148 agattca 19548154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 20317047 - 20317112
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataa 290  Q
    ||||| |||| |||||||| |||||||| ||||||||||||||| |||  ||||||||||||||||    
T  20317047 tacttgggaaggtgacatagctaatattagtgaaaacctacccggatctggaagtaactaagataa 20317112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 17661386 - 17661308
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||| | || |||||||||| |||||||||||||||||   ||||  ||||||| ||||||||||||    
T  17661386 gtatgttttatttcttttgtcatttgtctttagtta-catgagtaactaaaccc---tagggaagggttctaagatgaacctc 17661308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 18448103 - 18448179
Alignment:
Q  32 ttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacct 108  Q
    ||||||||||||||| | || |||||||||||||||||||| |||| | | ||||| |||||||| |||| ||||||    
T  18448103 ttttatttcttttgttatttgtctttagttaccatgagtaattaaatctttttaggatagggttctaagaagaacct 18448179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 19547935 - 19548022
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataacaaaataatggtaattaggaaaa 313  Q
    |||||||||| || ||||||||| |||| |||||||||||||| ||||  ||| ||||||||||||  || ||| ||||||||||||||    
T  19547935 tacttaggaaggtaacatacctattattggtgaaaacctacccaaatcgggaattaactaagataa-gaattaacggtaattaggaaaa 19548022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 8139891 - 8139840
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaa 77  Q
    ||||||||||||||||||||||| || |||||| ||| ||||||||||||||    
T  8139891 ggtatgttttatttcttttgtaatttgtctttaattatcatgagtaactaaa 8139840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 9850447 - 9850534
Alignment:
Q  23 taaggtatgttttatttcttttgtaaattatc-tttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||| |||||| ||||||||||| |  || ||||||||||||||||||||||| | | ||||| || ||||| ||||||||||||    
T  9850447 taaggtaagttttacttcttttgtaattagtcgtttagttaccatgagtaactaaatcttgttaggttatggttctaagatgaacctc 9850534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 29245076 - 29245125
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaactaa 76  Q
    ||||||| | |||||||||||| |||| ||||||||||||||||||||||    
T  29245076 gtatgttatgtttcttttgtaatttatatttagttaccatgagtaactaa 29245125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 30242533 - 30242485
Alignment:
Q  34 ttatttcttttgtaaattatctttagttaccatgagtaactaaacccta 82  Q
    ||||||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  30242533 ttatttcttttgtaatttatttttaggtactatgagtaactaaacccta 30242485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 48747748 - 48747700
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaacta 75  Q
    |||||||||||||||||||||| |||| |||||||| ||| ||||||||    
T  48747748 gtatgttttatttcttttgtaatttatttttagttatcataagtaacta 48747700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 13588272 - 13588205
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctaggg 93  Q
    ||||| ||||||||  ||||||  ||||||||||||||||||||||||||||   | |||||||||||    
T  13588272 ggtatattttatttactttgtactttatctttagttaccatgagtaactaaatatttttaggctaggg 13588205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 22217877 - 22217941
Alignment:
Q  225 tacttaggaaagtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaagataac 291  Q
    |||||||||| ||| ||||| |  |||| |||||||||||| ||||||| |||||||||||||||||    
T  22217877 tacttaggaaggtgtcatactt--tattggtgaaaacctactcgaatcaggaagtaactaagataac 22217941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 17263918 - 17263884
Alignment:
Q  28 tatgttttatttcttttgtaaattatctttagtta 62  Q
    ||||||||||||||||||||| |||||||||||||    
T  17263918 tatgttttatttcttttgtaatttatctttagtta 17263884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 22217679 - 22217753
Alignment:
Q  32 ttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaac 106  Q
    |||||||| |||| ||| || ||||||||| ||||| ||||||||||| | ||||| || ||||| |||||||||    
T  22217679 ttttattttttttataatttgtctttagttgccatgggtaactaaacctttttagggtatggttctaagatgaac 22217753  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 496
Target Start/End: Complemental strand, 22345627 - 22345585
Alignment:
Q  454 gggaacctttaagaccattgagaatttaagtaccctaatttaa 496  Q
    ||||||||||||||||||||||||||| || | ||||||||||    
T  22345627 gggaacctttaagaccattgagaatttcagaaacctaatttaa 22345585  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 12587968 - 12587892
Alignment:
Q  28 tatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaa 105  Q
    |||||||||||||||| |||| || |||||||||||||||| ||  ||||||||| | || |||||||| | ||||||    
T  12587968 tatgttttatttcttt-gtaatttgtctttagttaccatgaatagttaaaccctaattggatagggttctatgatgaa 12587892  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 20314802 - 20314851
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaacta 75  Q
    |||| |||||||||||||||||| || |||||||||| ||||| ||||||    
T  20314802 ggtaggttttatttcttttgtaatttgtctttagttaacatgaataacta 20314851  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 48642800 - 48642751
Alignment:
Q  236 gtgacatacctaatatttgtgaaaacctacccgaatcatgaagtaactaa 285  Q
    ||||||||||||||||| ||| |||||||||||||| |  ||||||||||    
T  48642800 gtgacatacctaatattagtgcaaacctacccgaattagaaagtaactaa 48642751  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 410
Target Start/End: Original strand, 12590326 - 12590370
Alignment:
Q  366 ccttgataaggtagacgagatagggttgtctgtttgtagaactac 410  Q
    |||| ||||||||||||||||| ||||| | ||||||||||||||    
T  12590326 cctttataaggtagacgagataaggttgcccgtttgtagaactac 12590370  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 22527344 - 22527268
Alignment:
Q  30 tgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaac 106  Q
    ||||||||||||||| ||| |  ||||||||||||||| ||||||||| | | ||||| || ||||  |||||||||    
T  22527344 tgttttatttcttttttaactcgtctttagttaccatgtgtaactaaatctttttaggttaaggttttaagatgaac 22527268  T

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Target: scaffold0086 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 8822 - 8736
Alignment:
Q  23 taaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||||||||| || |||||||||| |||||||||||||| | | |||| ||| ||||| ||| ||||||||    
T  8822 taaggtatgttttatttcttttgtaatttgtctttagttatcatgagtaactaaatctttttagactaaggttctaaggtgaacctc 8736  T

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Target: scaffold0086; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 13528 - 13612
Alignment:
Q  25 aggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||||||| | | || |||||||||||||| ||||| |||| | |  || |||||||||  ||||||||||||    
T  13528 aggtatgttttatttcttttattatttgtctttagttaccataagtaattaaatctttctaagctagggttataagatgaacctc 13612  T

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Target: scaffold0136 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 14515 - 14598
Alignment:
Q  26 ggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    |||||||||||||||| | |||| || ||||||||||||||||||||||||| | | ||| |||||||||| || |||||||||    
T  14515 ggtatgttttatttctatcgtaatttgtctttagttaccatgagtaactaaatctttttaagctagggttctaatatgaacctc 14598  T

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Target: scaffold0019 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 27555 - 27466
Alignment:
Q  20 tcttaaggtatgttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||| |||||||||||||||||| |||| || |||||| |||||||  |||||||||   | |||||||||||||| ||||||||||||    
T  27555 tcttagggtatgttttatttctttagtaatttgtctttaattaccatatgtaactaaatatttttaggctagggttctaagatgaacctc 27466  T

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Target: scaffold0394 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 10751 - 10838
Alignment:
Q  23 taaggtatg-ttttatttcttttgtaaattatctttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||| |||||||||||||  || || ||||||||||||||||||||||||| | | || || |||||||| ||||||||||||    
T  10751 taaggtatgcttttatttctttttcaatttgtctttagttaccatgagtaactaaatcttttttggatagggttctaagatgaacctc 10838  T

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Target: scaffold0340 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 16374 - 16324
Alignment:
Q  32 ttttatttcttttgtaaattatctttagttaccatgagtaactaaacccta 82  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  16374 ttttatttcttttgtaatttgtctttagttagcatgagtaactaaacccta 16324  T

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Target: scaffold0111 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 410
Target Start/End: Complemental strand, 4223 - 4177
Alignment:
Q  364 atccttgataaggtagacgagatagggttgtctgtttgtagaactac 410  Q
    ||||||| |||||||||||||||||||||| |||||||| |||||||    
T  4223 atccttggtaaggtagacgagatagggttgcctgtttgtggaactac 4177  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 392
Target Start/End: Complemental strand, 12824 - 12771
Alignment:
Q  339 agcataataactttattcttcttacatccttgataaggtagacgagatagggtt 392  Q
    |||||| ||||||||| ||||||| ||||||  |||||||||||||||||||||    
T  12824 agcatagtaactttatacttcttatatcctttgtaaggtagacgagatagggtt 12771  T

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Target: scaffold0360 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 17177 - 17223
Alignment:
Q  27 gtatgttttatttcttttgtaaattatctttagttaccatgagtaac 73  Q
    ||||||||||| ||||||||||  | |||||||||||||||||||||    
T  17177 gtatgttttatatcttttgtaacatttctttagttaccatgagtaac 17223  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 102397 - 102451
Alignment:
Q  55 tttagttaccatgagtaactaaaccctattaggctagggttcgaagatgaacctc 109  Q
    ||||||||||||| ||||||||| | | ||||||||| |||| ||||||||||||    
T  102397 tttagttaccatgtgtaactaaaactttttaggctagagttcaaagatgaacctc 102451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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