View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8756_high_17 (Length: 298)

Name: NF8756_high_17
Description: NF8756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8756_high_17
NF8756_high_17
[»] chr6 (35 HSPs)
chr6 (14-284)||(30522293-30522560)
chr6 (182-265)||(25426139-25426222)
chr6 (154-265)||(28641739-28641850)
chr6 (120-274)||(281808-281958)
chr6 (120-265)||(27693399-27693540)
chr6 (176-265)||(2117372-2117461)
chr6 (139-217)||(4420660-4420734)
chr6 (126-228)||(32171349-32171447)
chr6 (181-246)||(32171455-32171520)
chr6 (154-274)||(2027396-2027516)
chr6 (120-265)||(27595527-27595668)
chr6 (187-274)||(1402956-1403043)
chr6 (154-217)||(34939761-34939824)
chr6 (181-247)||(28088239-28088305)
chr6 (161-263)||(31324427-31324529)
chr6 (182-247)||(1275136-1275201)
chr6 (154-239)||(31624085-31624170)
chr6 (131-217)||(34939530-34939612)
chr6 (120-209)||(2460111-2460196)
chr6 (160-244)||(3168257-3168341)
chr6 (154-265)||(7785734-7785843)
chr6 (195-239)||(9041467-9041511)
chr6 (120-265)||(32386523-32386664)
chr6 (198-265)||(3785734-3785801)
chr6 (166-225)||(17241254-17241313)
chr6 (160-234)||(6647387-6647461)
chr6 (181-235)||(7945901-7945954)
chr6 (125-246)||(2023558-2023676)
chr6 (160-265)||(3155145-3155249)
chr6 (158-227)||(5564122-5564191)
chr6 (131-217)||(32577957-32578039)
chr6 (181-274)||(33787762-33787855)
chr6 (154-265)||(8010325-8010437)
chr6 (230-274)||(10452426-10452470)
chr6 (162-226)||(27909636-27909700)
[»] chr4 (36 HSPs)
chr4 (154-274)||(21157728-21157848)
chr4 (163-239)||(7694009-7694085)
chr4 (189-265)||(30581702-30581778)
chr4 (161-265)||(54325034-54325138)
chr4 (181-274)||(49219099-49219192)
chr4 (120-265)||(2996542-2996683)
chr4 (160-215)||(29467620-29467675)
chr4 (188-262)||(30338615-30338690)
chr4 (125-216)||(6987706-6987793)
chr4 (193-263)||(24091434-24091504)
chr4 (164-253)||(26747402-26747492)
chr4 (154-215)||(20936219-20936280)
chr4 (181-233)||(17975386-17975438)
chr4 (176-228)||(18011877-18011929)
chr4 (120-209)||(27123312-27123397)
chr4 (181-253)||(29601025-29601097)
chr4 (154-225)||(1965950-1966021)
chr4 (184-239)||(12650304-12650359)
chr4 (181-264)||(18628560-18628643)
chr4 (154-265)||(29263339-29263450)
chr4 (232-274)||(20936070-20936112)
chr4 (176-274)||(30207583-30207680)
chr4 (154-207)||(1137739-1137792)
chr4 (154-215)||(1312860-1312921)
chr4 (176-217)||(19429726-19429767)
chr4 (160-217)||(21593002-21593059)
chr4 (181-262)||(56055723-56055803)
chr4 (181-217)||(5131267-5131303)
chr4 (160-236)||(6978958-6979034)
chr4 (154-270)||(23819053-23819169)
chr4 (154-274)||(24929453-24929573)
chr4 (181-265)||(35064824-35064908)
chr4 (198-266)||(35958623-35958691)
chr4 (181-265)||(51630080-51630164)
chr4 (154-274)||(52746830-52746950)
chr4 (160-228)||(55547040-55547108)
[»] chr3 (37 HSPs)
chr3 (125-265)||(21574460-21574595)
chr3 (129-265)||(2201097-2201236)
chr3 (119-263)||(25182946-25183087)
chr3 (181-259)||(13709840-13709918)
chr3 (120-247)||(14548681-14548804)
chr3 (181-265)||(24887300-24887384)
chr3 (154-265)||(19679318-19679429)
chr3 (154-265)||(27290891-27291002)
chr3 (125-233)||(37273135-37273239)
chr3 (160-265)||(24785174-24785279)
chr3 (127-265)||(36646349-36646483)
chr3 (181-274)||(40122770-40122862)
chr3 (181-265)||(38462250-38462334)
chr3 (160-227)||(37825129-37825196)
chr3 (154-247)||(3044249-3044342)
chr3 (181-274)||(32554999-32555091)
chr3 (154-215)||(36101587-36101648)
chr3 (154-215)||(50952352-50952413)
chr3 (154-274)||(20192596-20192716)
chr3 (162-234)||(20669172-20669244)
chr3 (181-265)||(23785224-23785308)
chr3 (163-227)||(48048981-48049045)
chr3 (182-265)||(32069119-32069201)
chr3 (160-239)||(33725870-33725949)
chr3 (154-264)||(1217790-1217900)
chr3 (120-263)||(41452494-41452633)
chr3 (160-265)||(1816552-1816657)
chr3 (187-272)||(2719431-2719515)
chr3 (189-265)||(24158528-24158602)
chr3 (168-265)||(25453863-25453960)
chr3 (154-215)||(30923888-30923949)
chr3 (154-215)||(36139897-36139958)
chr3 (182-246)||(2923466-2923530)
chr3 (160-212)||(25925764-25925816)
chr3 (154-222)||(36200108-36200176)
chr3 (161-213)||(45432936-45432988)
chr3 (160-228)||(48528562-48528630)
[»] chr2 (42 HSPs)
chr2 (125-265)||(33942119-33942257)
chr2 (155-274)||(1939323-1939442)
chr2 (166-276)||(22681187-22681297)
chr2 (124-274)||(1741996-1742142)
chr2 (160-265)||(35485886-35485991)
chr2 (160-265)||(44458334-44458439)
chr2 (163-251)||(10198479-10198567)
chr2 (161-265)||(43173191-43173295)
chr2 (154-209)||(27237883-27237938)
chr2 (181-265)||(7103499-7103584)
chr2 (162-274)||(18962035-18962148)
chr2 (197-274)||(37292380-37292457)
chr2 (186-266)||(6167305-6167385)
chr2 (128-265)||(9478268-9478401)
chr2 (187-274)||(17952723-17952811)
chr2 (154-265)||(29316765-29316876)
chr2 (130-217)||(15120200-15120283)
chr2 (154-215)||(41817187-41817248)
chr2 (189-262)||(43205281-43205354)
chr2 (154-283)||(43985160-43985289)
chr2 (176-228)||(3067391-3067443)
chr2 (181-233)||(3078657-3078709)
chr2 (182-274)||(11513858-11513950)
chr2 (120-217)||(34651996-34652089)
chr2 (120-201)||(41809205-41809282)
chr2 (154-237)||(32821806-32821889)
chr2 (154-265)||(33256709-33256820)
chr2 (190-265)||(43141840-43141915)
chr2 (154-265)||(44438829-44438940)
chr2 (154-248)||(18179230-18179324)
chr2 (154-207)||(1647263-1647316)
chr2 (160-265)||(6993720-6993825)
chr2 (161-214)||(31228834-31228887)
chr2 (154-206)||(8820282-8820334)
chr2 (160-236)||(12215805-12215881)
chr2 (154-258)||(25790102-25790206)
chr2 (184-244)||(32848898-32848958)
chr2 (189-265)||(36863650-36863726)
chr2 (181-265)||(42817393-42817477)
chr2 (176-228)||(43259840-43259892)
chr2 (183-239)||(44238053-44238109)
chr2 (212-280)||(44439408-44439476)
[»] chr8 (52 HSPs)
chr8 (154-265)||(29973050-29973162)
chr8 (181-274)||(28769356-28769449)
chr8 (127-265)||(30191108-30191242)
chr8 (160-228)||(20672756-20672824)
chr8 (154-283)||(39551199-39551328)
chr8 (181-265)||(4558767-4558851)
chr8 (154-265)||(42215296-42215407)
chr8 (176-246)||(31705073-31705143)
chr8 (120-234)||(11569417-11569527)
chr8 (181-274)||(38036129-38036222)
chr8 (181-274)||(42370378-42370471)
chr8 (164-260)||(10075551-10075647)
chr8 (154-214)||(41606893-41606953)
chr8 (182-265)||(2093248-2093331)
chr8 (182-265)||(6864477-6864560)
chr8 (154-265)||(29262864-29262975)
chr8 (189-248)||(44865589-44865648)
chr8 (154-224)||(3254235-3254305)
chr8 (127-234)||(5069697-5069800)
chr8 (160-262)||(11795064-11795166)
chr8 (192-265)||(9836882-9836955)
chr8 (160-265)||(12361161-12361266)
chr8 (181-234)||(30277262-30277315)
chr8 (154-198)||(926511-926555)
chr8 (189-265)||(6509328-6509404)
chr8 (181-265)||(7918790-7918874)
chr8 (160-216)||(25869262-25869318)
chr8 (120-212)||(26410301-26410390)
chr8 (154-238)||(43504747-43504831)
chr8 (154-237)||(11183542-11183625)
chr8 (182-265)||(27728039-27728122)
chr8 (181-247)||(7645965-7646031)
chr8 (126-217)||(7918412-7918499)
chr8 (181-239)||(8062324-8062382)
chr8 (160-274)||(21653041-21653155)
chr8 (131-217)||(29973168-29973251)
chr8 (125-239)||(30987956-30988067)
chr8 (195-265)||(34770861-34770931)
chr8 (181-227)||(39881769-39881815)
chr8 (161-206)||(2235653-2235698)
chr8 (160-217)||(2458562-2458619)
chr8 (154-219)||(11185236-11185301)
chr8 (182-263)||(30013189-30013270)
chr8 (120-193)||(2487968-2488037)
chr8 (160-212)||(2492958-2493010)
chr8 (183-239)||(5227530-5227586)
chr8 (120-156)||(7853686-7853722)
chr8 (120-152)||(21130690-21130722)
chr8 (188-252)||(29169121-29169185)
chr8 (129-206)||(31875564-31875637)
chr8 (161-265)||(34849072-34849176)
chr8 (191-247)||(43709260-43709316)
[»] chr7 (33 HSPs)
chr7 (125-265)||(48157085-48157221)
chr7 (120-274)||(28165051-28165201)
chr7 (118-252)||(33645918-33646049)
chr7 (166-276)||(38010672-38010782)
chr7 (125-196)||(36598321-36598388)
chr7 (171-265)||(40688993-40689087)
chr7 (120-262)||(44151436-44151578)
chr7 (190-274)||(17989049-17989133)
chr7 (187-271)||(23721469-23721553)
chr7 (187-239)||(30812143-30812195)
chr7 (154-265)||(12110329-12110440)
chr7 (154-253)||(28702731-28702829)
chr7 (154-240)||(44615094-44615180)
chr7 (164-265)||(24363601-24363702)
chr7 (183-264)||(47177606-47177687)
chr7 (181-265)||(27378845-27378929)
chr7 (181-241)||(46056027-46056087)
chr7 (195-274)||(5006540-5006619)
chr7 (161-228)||(9423591-9423658)
chr7 (154-225)||(12234879-12234950)
chr7 (125-209)||(22387861-22387941)
chr7 (190-265)||(29363487-29363562)
chr7 (119-154)||(39591457-39591492)
chr7 (176-227)||(40439061-40439112)
chr7 (160-206)||(27517852-27517898)
chr7 (195-265)||(28340427-28340497)
chr7 (120-191)||(36537951-36538018)
chr7 (182-227)||(39505963-39506008)
chr7 (190-234)||(3968783-3968827)
chr7 (125-157)||(17944862-17944894)
chr7 (154-234)||(18749807-18749887)
chr7 (190-274)||(22759146-22759230)
chr7 (182-265)||(46825067-46825151)
[»] chr1 (47 HSPs)
chr1 (160-265)||(12477283-12477388)
chr1 (125-274)||(52286638-52286784)
chr1 (155-253)||(4622074-4622172)
chr1 (161-265)||(30257652-30257756)
chr1 (125-265)||(10439655-10439791)
chr1 (127-247)||(15579469-15579585)
chr1 (154-217)||(35925707-35925770)
chr1 (160-274)||(17269210-17269324)
chr1 (184-274)||(27738200-27738290)
chr1 (187-253)||(44422680-44422746)
chr1 (154-215)||(4699605-4699666)
chr1 (160-265)||(7218070-7218175)
chr1 (120-274)||(31517700-31517850)
chr1 (181-265)||(15361682-15361766)
chr1 (154-234)||(27140478-27140558)
chr1 (154-246)||(28482223-28482315)
chr1 (155-274)||(35080060-35080180)
chr1 (181-265)||(45205037-45205121)
chr1 (119-207)||(6976952-6977035)
chr1 (186-265)||(48830098-48830177)
chr1 (181-239)||(4700083-4700141)
chr1 (189-271)||(5150900-5150982)
chr1 (171-265)||(9656619-9656713)
chr1 (160-265)||(10199404-10199509)
chr1 (162-239)||(14629964-14630041)
chr1 (154-265)||(26184720-26184828)
chr1 (181-274)||(34179889-34179982)
chr1 (181-265)||(16322818-16322902)
chr1 (188-227)||(3924631-3924670)
chr1 (154-209)||(6292518-6292573)
chr1 (154-273)||(7262508-7262627)
chr1 (181-216)||(24146297-24146332)
chr1 (189-274)||(30259511-30259597)
chr1 (129-195)||(4481969-4482031)
chr1 (181-274)||(11211078-11211171)
chr1 (154-207)||(11639406-11639459)
chr1 (134-216)||(15437981-15438059)
chr1 (128-169)||(17009550-17009591)
chr1 (190-263)||(26630434-26630507)
chr1 (154-239)||(37842345-37842430)
chr1 (189-265)||(15566661-15566737)
chr1 (120-265)||(15581223-15581364)
chr1 (140-265)||(17628568-17628689)
chr1 (161-245)||(25479570-25479654)
chr1 (160-264)||(27887114-27887218)
chr1 (154-247)||(28689442-28689537)
chr1 (161-217)||(28935873-28935929)
[»] chr5 (44 HSPs)
chr5 (125-274)||(14295466-14295611)
chr5 (125-225)||(2468440-2468537)
chr5 (120-227)||(37611175-37611278)
chr5 (120-227)||(37787905-37788008)
chr5 (154-263)||(17368647-17368756)
chr5 (125-247)||(37526164-37526282)
chr5 (125-247)||(37588325-37588443)
chr5 (160-264)||(17258879-17258983)
chr5 (154-253)||(36542272-36542371)
chr5 (132-239)||(32172648-32172751)
chr5 (154-239)||(39105459-39105545)
chr5 (129-274)||(28586735-28586876)
chr5 (187-235)||(29844970-29845018)
chr5 (160-228)||(36774703-36774771)
chr5 (198-269)||(3951580-3951651)
chr5 (154-264)||(41957441-41957551)
chr5 (188-249)||(32408616-32408677)
chr5 (127-265)||(35960383-35960516)
chr5 (181-249)||(6183429-6183497)
chr5 (189-265)||(26516369-26516445)
chr5 (154-214)||(28413274-28413334)
chr5 (181-280)||(16889689-16889788)
chr5 (184-239)||(29201528-29201583)
chr5 (190-265)||(30217051-30217126)
chr5 (124-228)||(35095750-35095850)
chr5 (195-274)||(38047886-38047965)
chr5 (154-208)||(499721-499775)
chr5 (181-239)||(18853006-18853064)
chr5 (176-274)||(35550909-35551006)
chr5 (162-228)||(36638753-36638819)
chr5 (225-271)||(39941804-39941850)
chr5 (154-239)||(2568653-2568738)
chr5 (154-227)||(2880537-2880610)
chr5 (129-235)||(4619706-4619808)
chr5 (221-274)||(38766900-38766953)
chr5 (230-271)||(39941694-39941735)
chr5 (154-227)||(40205064-40205137)
chr5 (154-210)||(1899178-1899234)
chr5 (154-265)||(9202737-9202849)
chr5 (181-265)||(10272448-10272532)
chr5 (200-244)||(10391331-10391375)
chr5 (230-274)||(35135728-35135772)
chr5 (187-247)||(35553211-35553271)
chr5 (222-274)||(39750103-39750155)
[»] scaffold0608 (1 HSPs)
scaffold0608 (129-195)||(9606-9668)
[»] scaffold0584 (1 HSPs)
scaffold0584 (181-262)||(1350-1430)
[»] scaffold0446 (1 HSPs)
scaffold0446 (181-262)||(5476-5556)
[»] scaffold0091 (1 HSPs)
scaffold0091 (183-239)||(6947-7003)


Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 14 - 284
Target Start/End: Original strand, 30522293 - 30522560
Alignment:
Q  14 agacaggaccacccttttgaatacaccatgtttggagagatatcacaatacctgatgctacaattccctgaaatcatcacacacaattgaattcaattca 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30522293 agacaggaccacccttttgaatacaccatgtttggagagatatcacaatacctgatgctacaattccctgaaatcatcacacacaattgaattcaattca 30522392  T
Q  114 ccgtaaacttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggat 213  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  30522393 ccgtaaacttatgagactgtttgagagagctt---gaaacaaacatcttatgacatgttcaaaagccgttgttagcttatttgcataaactctccaggat 30522489  T
Q  214 agctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaagtat 284  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30522490 agctaataaaagcagattatagcttatatgaaaatagtttcactttattttaaattttgttttggaagtat 30522560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 25426222 - 25426139
Alignment:
Q  182 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||||| |||||||| ||||| |||||||||||||| ||||||| || |||||||||||||||||  | ||| |||||||||||    
T  25426222 tttttaacttatttctataaattctccaggatagcttataaaaatagcttatagcttacatgaaagcaatttgactttatttta 25426139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 28641739 - 28641850
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||| ||||||||| |||| ||||||||||||||| ||||| |||| ||| ||||||| | ||||||| |||||||||| |  |||| || ||    
T  28641739 aaacagcttataacatgttcataagctgtttttagcttattttcataagctctgcagaatagctattgaaaacagtttatagcttaaactaaaacagatt 28641838  T
Q  254 cactttatttta 265  Q
     |||||||||||    
T  28641839 gactttatttta 28641850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 274
Target Start/End: Original strand, 281808 - 281958
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||| |||||||||||| ||||||| |||||| |||    ||||||||||||  | |||  ||||| ||||||||||||| | ||||| ||||||||| |    
T  281808 acttgtgagactgtttgggagagctaatggaagcaa----cttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagctta 281903  T
Q  220 taaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    | || |||| |||||||||| ||||||| |  || |||||||||||  |||||||    
T  281904 tgaacacagcttatagcttatatgaaaacaagttgactttattttatcttttgtt 281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 27693399 - 27693540
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||| ||||||| |||||||||  ||||||||||||    ||||||||||||||| ||||  |||| |  | |||||| ||||||||| ||||| || ||    
T  27693399 acttgtgagactatttgagagaatttatggaaacaa----cttatgacatgttcataagctattttcaagtaatttccgtaaactctctaggattgcaaa 27693494  T
Q  220 taaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    | ||| ||| ||| |||||| ||||||||| ||| |||||||||||    
T  27693495 tgaaatcagcttacagcttatatgaaaataatttgactttatttta 27693540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 265
Target Start/End: Complemental strand, 2117461 - 2117372
Alignment:
Q  176 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||| |||||||||||||||| |||| ||||| |||||| || || ||||||  |||||| ||| ||||||||||||| ||||| |||||    
T  2117461 aagctgtttttagcttatttcaataagctctctaggataacttatgaaaacaacttatagattatatgaaaatagtttgactttgtttta 2117372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 4420734 - 4420660
Alignment:
Q  139 agagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 217  Q
    ||||||||| ||||||||    |||||||||||||| |||| ||||| ||||||||||||||| ||||||| |||||||    
T  4420734 agagcttatagaaacaaa----ttatgacatgttcataagctgttttcagcttatttccataagctctccaagatagct 4420660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 32171349 - 32171447
Alignment:
Q  126 gagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaa 225  Q
    ||||||||||||||||||||||| |||||     ||||||||| || || ||||  |||| ||||||||||||||| || ||||||||| ||||| ||||    
T  32171349 gagactgtttgagagagcttatgaaaacag----cttatgacaagtccagaagctattttcagcttatttccataagctatccaggataactaatgaaaa 32171444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 32171520 - 32171455
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaa 246  Q
    ||||| ||||||||||||||| |||||||||||| || |  |||||||||||||||||| ||||||    
T  32171520 gttttcagcttatttccataagctctccaggataccttactaaaacagattatagcttatatgaaa 32171455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 274
Target Start/End: Original strand, 2027396 - 2027516
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||||||||| | || |||| ||||| |||||||||   |||||||| || | ||||| || | ||||| |||||| ||| |||||||||||||    
T  2027396 aaacagcttatgacatttccataagctgttttcagcttatttatttaaactctacatgctagcttatgagaacagcttataggttatatgaaaatagttt 2027495  T
Q  254 cactttattttaaattttgtt 274  Q
     |||||||||||  |||||||    
T  2027496 gactttattttatcttttgtt 2027516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 27595527 - 27595668
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    ||||||||||||||||| ||||  ||||||||||||    ||||||||||||||| ||||  |||| |  | |||||| ||||||||| ||||| || ||    
T  27595527 acttatgagactgtttgggagaatttatggaaacaa----cttatgacatgttcataagctattttcaagtaatttccgtaaactctctaggattgcaaa 27595622  T
Q  220 taaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    | |||  |  ||| |||||| ||||||||| ||| |||||||||||    
T  27595623 tgaaattaacttacagcttatatgaaaataatttgactttatttta 27595668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 1403043 - 1402956
Alignment:
Q  187 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||| ||||| ||||  |||||| ||||||| || ||||||  |||||||||| ||||||||||||| |||||||||||  |||||||    
T  1403043 agctaatttctataagatctccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatcttttgtt 1402956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 34939824 - 34939761
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 217  Q
    ||||| |||||||||||| || ||   ||||| |||||||||||||||||||||||||||||||    
T  34939824 aaacagcttatgacatgtccataaattgttttcagcttatttccataaactctccaggatagct 34939761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 28088239 - 28088305
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaa 247  Q
    ||||| ||||||||||||| | ||||||| ||||||| || ||||||| |||||||||| |||||||    
T  28088239 gttttgagcttatttccatgagctctccatgatagcttatgaaaacagtttatagcttatatgaaaa 28088305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 263
Target Start/End: Complemental strand, 31324529 - 31324427
Alignment:
Q  161 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 260  Q
    ||||||||||||||||| | |||||   |||||||  |||| |||| || ||||||| || ||  ||| |||||||||||||||||||||||| || |||    
T  31324529 ttatgacatgttcaaaaactgttttagacttattttaataagctcttcatgatagcttatgaatgcagcttatagcttacatgaaaatagtttaacctta 31324430  T
Q  261 ttt 263  Q
    |||    
T  31324429 ttt 31324427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 1275201 - 1275136
Alignment:
Q  182 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaa 247  Q
    |||| ||||||||||||||| |||||||||||| |  || ||||||| |||||||||| |||||||    
T  1275201 ttttcagcttatttccataagctctccaggataacatatgaaaacagcttatagcttatatgaaaa 1275136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 31624170 - 31624085
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||| ||||||||||||||| |||| ||||| | ||||||| |||||  |||||| ||||||  || ||||||| ||||||||||    
T  31624170 aaacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctta 31624085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 34939612 - 34939530
Alignment:
Q  131 tgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 217  Q
    |||||||||||||||||||||||||    ||||||||| || |  |||  ||||| ||||||||||||||| |||| ||||||||||    
T  34939612 tgtttgagagagcttatggaaacaa----cttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatagct 34939530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 2460111 - 2460196
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctcca 209  Q
    |||| |||||||||||||||||||||||||||||||    ||||||||||||    |||  ||||| | ||||||||||||| |||||||    
T  2460111 acttgtgagactgtttgagagagcttatggaaacaa----cttatgacatgtctttaagttgttttcaacttatttccataagctctcca 2460196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 3168257 - 3168341
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatga 244  Q
    |||||||||||| ||   || ||||| ||||||||||| ||| ||||||||||||||| |  ||||||| |||||||||| ||||    
T  3168257 cttatgacatgtccatcggctgttttcagcttatttccttaagctctccaggatagcttaagaaaacagtttatagcttatatga 3168341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 7785734 - 7785843
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||||||||||  | |||  ||||| ||||||||||||||| |||||||  |||||  || || |||  |||||||||| ||||||| |||||    
T  7785734 aaacagcttatgacatgtctataagttgttttcagcttatttccataagctctccaaaatagc--atgaagacaatttatagcttatatgaaaagagttt 7785831  T
Q  254 cactttatttta 265  Q
     |||||||||||    
T  7785832 gactttatttta 7785843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 9041467 - 9041511
Alignment:
Q  195 tccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||    
T  9041467 tccataagctctccacgatagctaataaaaacagcttatagctta 9041511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 32386523 - 32386664
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||| |||||| |||||| |||||||||||||| |    |||||| |||||| || ||   ||||| ||||||||| ||||| |||||||||||| ||||    
T  32386523 acttgtgagaccgtttgaaagagcttatggaaata----tcttataacatgtccacaacttgttttcagcttattttcataagctctccaggataactaa 32386618  T
Q  220 taaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    | ||||||   |||| |||| ||||||| | ||| || ||||||||    
T  32386619 tgaaaacaacgtataccttatatgaaaacaatttgaccttatttta 32386664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 3785734 - 3785801
Alignment:
Q  198 ataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||| |||||||| |||||| | |||||||| |||||||||| | ||||| ||||| |||||||||||    
T  3785734 ataagctctccagaatagcttacaaaaacagcttatagcttatacgaaaacagtttaactttatttta 3785801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 17241254 - 17241313
Alignment:
Q  166 acatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaa 225  Q
    ||||||||| |||  ||||| | ||||||||||||||||||||| |||||||||| ||||    
T  17241254 acatgttcataagttgttttcaacttatttccataaactctccaagatagctaatgaaaa 17241313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 6647461 - 6647387
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattata 234  Q
    ||||||||||||||| |||  ||||| | ||||||| ||||| ||||| | ||||||| || |||||||||||||    
T  6647461 cttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaacagattata 6647387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 7945901 - 7945954
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatag 235  Q
    ||||| ||||||||||||||| ||||||||||||||| || ||||||| ||||||    
T  7945901 gttttaagcttatttccataagctctccaggatagct-atgaaaacaggttatag 7945954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 246
Target Start/End: Complemental strand, 2023676 - 2023558
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaata-aa 223  Q
    ||||||||||| ||||||||| |||||||||    |||||||| || ||| || | ||||| |||||||||| |||| ||||||| || || | ||| ||    
T  2023676 tgagactgtttcagagagcttgtggaaacaa----cttatgacctgatcacaaactgttttcagcttatttctataagctctccaagaaagtttatagaa 2023581  T
Q  224 aacagattatagcttacatgaaa 246  Q
    || || |||||||||| ||||||    
T  2023580 aatagcttatagcttatatgaaa 2023558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 3155249 - 3155145
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    ||||||||||||  | |||| ||||| ||||||||||||| | |||||||||||| || || |||| || |||||| ||| ||| ||| ||||| |||||    
T  3155249 cttatgacatgtctataagctgttttcagcttatttccat-agctctccaggatatcttatgaaaatagcttataggttatatggaaacagtttgacttt 3155151  T
Q  260 atttta 265  Q
     |||||    
T  3155150 gtttta 3155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 5564122 - 5564191
Alignment:
Q  158 atcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 227  Q
    |||||||||||||| | ||||| ||||| ||||||||| |||||||||| || || |||| || ||||||    
T  5564122 atcttatgacatgtccgaaagctgttttcagcttatttgcataaactcttcaagacagcttatgaaaaca 5564191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 32577957 - 32578039
Alignment:
Q  131 tgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 217  Q
    |||||||||||||||||| ||||||    |||||||||||| |   ||| ||||| ||||||||||||||  |||| ||||||||||    
T  32577957 tgtttgagagagcttatgaaaacaa----cttatgacatgtccttgagctgttttcagcttatttccatatgctcttcaggatagct 32578039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 33787762 - 33787855
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||| ||| ||||||||||| ||||||| |||| || || ||||||| ||||| |||| ||||||  | ||| ||||| ||||| ||||||||    
T  33787762 gttttcagcctatttccataagctctccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgtt 33787855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 265
Target Start/End: Complemental strand, 8010437 - 8010325
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctt-acatgaaaatagtt 252  Q
    ||||| || |||||||||||| ||||  |||| || ||||||| ||||  ||||||||||| || || ||||||| ||||| ||| | |||||| ||| |    
T  8010437 aaacaactcatgacatgttcataagctattttcagtttatttctataagttctccaggataacttattaaaacagcttataacttaaaatgaaagtagat 8010338  T
Q  253 tcactttatttta 265  Q
    | |||||||||||    
T  8010337 tgactttatttta 8010325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 10452426 - 10452470
Alignment:
Q  230 ttatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||||||||| ||||||||||||| | ||||||||| ||||||||    
T  10452426 ttatagcttatatgaaaatagtttgattttattttatattttgtt 10452470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 27909636 - 27909700
Alignment:
Q  162 tatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac 226  Q
    |||||||||| || |||  ||||| ||||||||||||||| |||||||| | |||| ||||||||    
T  27909636 tatgacatgtccataagttgttttcagcttatttccataagctctccagtaaagcttataaaaac 27909700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 274
Target Start/End: Complemental strand, 21157848 - 21157728
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||||||||| | ||||||| ||||||||||||||||||||| |||| |||||||||  || ||||||  |||||||||||||||||| |||||    
T  21157848 aaacagcttatgacatttacaaaagctgtttttagcttatttccataagctcttcaggatagcatatgaaaacatcttatagcttacatgaaaacagttt 21157749  T
Q  254 cactttattttaaattttgtt 274  Q
     |||||| |||| | ||||||    
T  21157748 gactttagtttatactttgtt 21157728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 7694009 - 7694085
Alignment:
Q  163 atgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    |||||||||||| |||  ||||| |||||||||||||||||||||||||||| || || ||||||| ||||||||||    
T  7694009 atgacatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagctta 7694085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 30581702 - 30581778
Alignment:
Q  189 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||||||||||||||||| |||| || || ||||||| |||||||||| | ||||||||||| |||| ||||||    
T  30581702 cttatttccataaactctccaagataacttattaaaacagcttatagcttatacgaaaatagtttgacttcatttta 30581778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 265
Target Start/End: Original strand, 54325034 - 54325138
Alignment:
Q  161 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 260  Q
    |||||| |||| || |||| ||||| || |||| ||||||||||||||| |||||||  | |||| || |||||||||| ||||||| ||||| ||||||    
T  54325034 ttatgatatgtccataagctgttttcagtttatctccataaactctccatgatagcttttgaaaatagcttatagcttatatgaaaacagtttgacttta 54325133  T
Q  261 tttta 265  Q
    |||||    
T  54325134 tttta 54325138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 49219192 - 49219099
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||| ||||||||||||||| ||||  | ||||| | || ||||||  |||||||||| ||||||||| ||| ||||||||||| ||||||||    
T  49219192 gttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatattttgtt 49219099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 2996683 - 2996542
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||| |||||||||||||||||||||||| ||||||    |||||||||||| || ||||  |||| | ||||||| ||||  ||||||| ||||||| |    
T  2996683 acttttgagactgtttgagagagcttatgaaaacaa----cttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagctta 2996588  T
Q  220 taaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    | ||||||  ||||| |||| || |||| | ||| ||| |||||||    
T  2996587 tgaaaacaacttataacttatataaaaacaatttgactgtatttta 2996542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 29467620 - 29467675
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 215  Q
    |||||||||||| || |||| ||||| ||||||||||||||||||||| |||||||    
T  29467620 cttatgacatgtccataagctgttttcagcttatttccataaactctctaggatag 29467675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 30338615 - 30338690
Alignment:
Q  188 gcttatttccataaactctccaggatagctaat-aaaaacagattatagcttacatgaaaatagtttcactttatt 262  Q
    |||||||| ||||||||||||| || |||| || |||||||| |||||||||| ||||||| ||||| ||||||||    
T  30338615 gcttattttcataaactctccaagagagcttatgaaaaacagtttatagcttatatgaaaacagtttaactttatt 30338690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 6987706 - 6987793
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagc 216  Q
    |||||||||||| ||||||||||||| ||||    |||||||||||| || || |  |||| | ||||||||||||| ||||||||||||||    
T  6987706 tgagactgtttgggagagcttatggatacaa----cttatgacatgtccataaactattttcaacttatttccataagctctccaggatagc 6987793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 24091504 - 24091434
Alignment:
Q  193 tttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattt 263  Q
    |||||||||||  ||||||||| || || ||||||| |||||||||| ||||||||| ||| |||||||||    
T  24091504 tttccataaaccttccaggataacttatgaaaacagtttatagcttatatgaaaataatttgactttattt 24091434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 253
Target Start/End: Original strand, 26747402 - 26747492
Alignment:
Q  164 tgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattat-agcttacatgaaaatagttt 253  Q
    ||||||||||| ||||  ||||||||||||||||||||  |||  |||||| ||||| ||||||  |||| |||||| |||||||||||||    
T  26747402 tgacatgttcataagctttttttagcttatttccataagttctttaggataactaatgaaaacaacttataagcttatatgaaaatagttt 26747492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 20936219 - 20936280
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 215  Q
    ||||| ||||||| ||||||| |||| ||||| | ||||||||||||| |||||||||||||    
T  20936219 aaacaacttatgatatgttcataagctgttttcaccttatttccataatctctccaggatag 20936280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 17975386 - 17975438
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattat 233  Q
    |||||||||||||||||| || ||||||| ||||||| |||||||||| ||||    
T  17975386 gtttttagcttatttccagaagctctccaagatagcttataaaaacagcttat 17975438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 18011929 - 18011877
Alignment:
Q  176 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 228  Q
    |||||||||||||||||||| |||||||||| || ||||||| || |||||||    
T  18011929 aagccgtttttagcttattttcataaactcttcaagatagcttatgaaaacag 18011877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 27123312 - 27123397
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctcca 209  Q
    |||| |||||||||||||||||||||||||||||||    ||||||||||||    |||  ||||| | ||||||||||||| |||||||    
T  27123312 acttgtgagactgtttgagagagcttatggaaacaa----cttatgacatgtctttaagttgttttcaacttatttccataagctctcca 27123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 29601025 - 29601097
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||||||| |||||  |||| ||||||||  || ||||||||||||||||| ||||||||| ||||    
T  29601025 gttttcagcttattttcataagttctctaggatagcatatgaaaacagattatagcttgcatgaaaatggttt 29601097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 1966021 - 1965950
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaa 225  Q
    ||||| ||||||||||||||| |||| ||||||| |||||||||| ||  | || ||||||||| |||||||    
T  1966021 aaacaacttatgacatgttcataagctgtttttaacttatttccagaagatttctaggatagcttataaaaa 1965950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 12650304 - 12650359
Alignment:
Q  184 tttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||||| |||||||||| ||||||||||||| | || ||||||| ||||||||||    
T  12650304 tttagctaatttccataagctctccaggataggttatgaaaacagcttatagctta 12650359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 18628560 - 18628643
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttt 264  Q
    ||||| ||||||||||||||| ||||||| |||| || || ||||||| ||||| |||| || |||| ||||| ||| ||||||    
T  18628560 gttttcagcttatttccataagctctccaagataacttatgaaaacagtttataacttatataaaaacagtttgactatatttt 18628643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 265
Target Start/End: Complemental strand, 29263450 - 29263339
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||||| ||||||| |||  ||||| |||||||||||| || |||| |||||||||| || ||||||  |||| |||||  |||||| | | |    
T  29263450 aaacagcttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaacaacttatcgcttatttgaaaacaatgt 29263351  T
Q  254 cactttatttta 265  Q
     |||||||||||    
T  29263350 aactttatttta 29263339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 20936070 - 20936112
Alignment:
Q  232 atagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  20936070 atagcttacatgaaaatagtttgactttattttatcttttgtt 20936112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 30207583 - 30207680
Alignment:
Q  176 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||| ||||| ||||||||||||||| ||||| | | ||||| || ||||||  |||||||||| ||||||| ||||| | |||||||||  |||||||    
T  30207583 aagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaacagtttga-tttattttattttttgtt 30207680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 1137792 - 1137739
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctc 207  Q
    ||||||||||||||||||||| |||  ||||| || |||||||||||| |||||    
T  1137792 aaacatcttatgacatgttcataagttgttttcagtttatttccataagctctc 1137739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 1312921 - 1312860
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 215  Q
    ||||| ||||| |||| |||| || | ||||| ||||||||||||||||||||||| |||||    
T  1312921 aaacaacttattacatattcataaactgttttcagcttatttccataaactctccaagatag 1312860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 19429767 - 19429726
Alignment:
Q  176 aagccgtttttagcttatttccataaactctccaggatagct 217  Q
    |||| ||||| ||||||||||||||| |||||||||||||||    
T  19429767 aagctgttttcagcttatttccataagctctccaggatagct 19429726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 21593002 - 21593059
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 217  Q
    ||||||||||||| | |||| | ||| ||||||||||||||||| | |||||||||||    
T  21593002 cttatgacatgtttataagctgctttcagcttatttccataaacacgccaggatagct 21593059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 56055803 - 56055723
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatt 262  Q
    ||||||| ||||||| ||||| || ||||||||||||| | |||| || |||||||||| |||||| |||||| | ||||||    
T  56055803 gtttttatcttattttcataagct-tccaggatagctagttaaaatagcttatagcttatatgaaagtagtttaagtttatt 56055723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 5131267 - 5131303
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagct 217  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  5131267 gttttcagcttatttccataagctctccaggatagct 5131303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 6978958 - 6979034
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagc 236  Q
    ||||||||||||  | |||| ||||| ||||||||| ||||||||||  ||||| ||| |||||||||  |||||||    
T  6978958 cttatgacatgtctataagctgttttcagcttattttcataaactctttaggatggcttataaaaacaacttatagc 6979034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 270
Target Start/End: Complemental strand, 23819169 - 23819053
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||||||||||| || |||  ||||| | |||||||| |||| |||| || ||||||| || ||||||  ||||| |||| ||||||| |||||    
T  23819169 aaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaacatgttataacttatatgaaaacagttt 23819070  T
Q  254 cactttattttaaattt 270  Q
     |||  |||||| ||||    
T  23819069 gactacattttatattt 23819053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 274
Target Start/End: Complemental strand, 24929573 - 24929453
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||||| |||||||| ||   ||||| ||||||||||||||| ||||| || | || | || ||||||  |||||||||  ||||||| ||||     
T  24929573 aaacagcttatggcatgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaaacagtta 24929474  T
Q  254 cactttattttaaattttgtt 274  Q
     |||||||||||  |||||||    
T  24929473 gactttattttatcttttgtt 24929453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 35064908 - 35064824
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||| ||||||||||||||||||||||| |||| || || |||||||  |||||| || |  |||| |||||  ||||||||||    
T  35064908 gttttcagcttatttccataaactctccatgatatcttatgaaaacagcatatagcctatacaaaaacagtttatctttatttta 35064824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 35958691 - 35958623
Alignment:
Q  198 ataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaa 266  Q
    |||||||||||||||||||| || ||||||| || ||||||| || |||  | ||| ||||||||||||    
T  35958691 ataaactctccaggatagcttatgaaaacagcttctagcttatataaaacaaatttgactttattttaa 35958623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 51630164 - 51630080
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||| ||||||||| |||||| ||| || ||||||| || |||| || |||||||||| || |||| | ||| |||||||||||    
T  51630164 gttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttatttta 51630080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 274
Target Start/End: Original strand, 52746830 - 52746950
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||| |||||||||| |||| ||||| |||| |||| ||||| |  | || ||||||| || ||||||| |||| |||||||  |||| | |||    
T  52746830 aaacagcttaagacatgttcataagctgttttcagctgattttcataagccttacaagatagcttatgaaaacagcttatggcttacacaaaaacaattt 52746929  T
Q  254 cactttattttaaattttgtt 274  Q
     |||||||||||  |||||||    
T  52746930 aactttattttatcttttgtt 52746950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 55547040 - 55547108
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 228  Q
    ||||||||||||  | |||  |||||||||||||||||||||||| | ||| |||||| || |||||||    
T  55547040 cttatgacatgtctataagttgtttttagcttatttccataaacttttcagcatagcttatgaaaacag 55547108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 265
Target Start/End: Complemental strand, 21574595 - 21574460
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 224  Q
    |||||||||||| ||||||||||| ||||||    ||||||||||||||| |||| | ||||||||||||||||||| ||||||| | ||||| ||||||    
T  21574595 tgagactgtttgggagagcttatgaaaacaa----cttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaa 21574500  T
Q  225 acagattatagcttacatgaaaatagtttcactttatttta 265  Q
    | || |||||||||| ||| ||| | ||| |||||||||||    
T  21574499 aaag-ttatagcttatatgtaaacaatttaactttatttta 21574460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 2201236 - 2201097
Alignment:
Q  129 actgtttgagagagcttatggaaa---caaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaa 225  Q
    |||||||| |||||||||||||||    ||||| ||||||| ||||||| || |  |||| ||||| ||||| |||||| |||| |||||||||| ||||    
T  2201236 actgtttgggagagcttatggaaattggaaacaacttatgatatgttcataaactcttttcagcttttttccttaaactatccaagatagctaatgaaaa 2201137  T
Q  226 cagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||| |||||||||| ||||||| ||||| ||||| |||||    
T  2201136 cagcttatagcttatatgaaaacagtttgactttgtttta 2201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 263
Target Start/End: Original strand, 25182946 - 25183087
Alignment:
Q  119 aacttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgttttt-agcttatttccataaactctccaggatagct 217  Q
    ||||| |||||||||||||||||||||||| ||||||    |||||||||| | || ||||  ||||| ||| |||||||| ||| | |||| |||||||    
T  25182946 aacttgtgagactgtttgagagagcttatgaaaacaa----cttatgacatatccataagctatttttcagcatatttccacaaattttccatgatagct 25183041  T
Q  218 aataaaaacagattatagcttacatgaaaatagtttcactttattt 263  Q
     || ||||||| |||||||| | |||||||||| || |||||||||    
T  25183042 tatgaaaacagcttatagctcatatgaaaatagcttaactttattt 25183087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 13709840 - 13709918
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    ||||| || ||||||| |||||||||||||||||||| || ||||||||||||| ||||||||||| | |||| |||||    
T  13709840 gttttcagtttatttcaataaactctccaggatagcttatgaaaacagattataccttacatgaaatttgtttgacttt 13709918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 247
Target Start/End: Original strand, 14548681 - 14548804
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||| |||||||||||||||||||||||| ||||||    | |||||||| || | | || ||||| ||||||||||||||| |||||||| ||| || |    
T  14548681 acttgtgagactgtttgagagagcttatgaaaacaa----cgtatgacattttaataggctgttttcagcttatttccataagctctccagaataactta 14548776  T
Q  220 taaaaacagattatagcttacatgaaaa 247  Q
    | ||||||  |||||||||| |||||||    
T  14548777 tgaaaacaacttatagcttatatgaaaa 14548804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 24887300 - 24887384
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||| |||||||| |||||| ||||||||||||||| || ||||||| || ||||||| ||||| | ||||| |||||||||||    
T  24887300 gttttcagcttattcccataagctctccaggatagcttatgaaaacagcttttagcttatatgaatacagtttgactttatttta 24887384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 19679318 - 19679429
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||||||||| | |||||| ||||  ||||||||||  | ||||||||| ||||| | |||||||||  |||||||||| | ||||| |||||    
T  19679318 aaacaacttatgacatgctaaaaagctgtttgcagcttatttcttttaactctccaagatagtttataaaaacaacttatagcttataagaaaacagttt 19679417  T
Q  254 cactttatttta 265  Q
     |||||||||||    
T  19679418 gactttatttta 19679429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 27290891 - 27291002
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||||||||||  || |||| ||||| ||||||||||||| |||||| |||||||||||||  |||||| || ||| ||| ||||||| ||||     
T  27290891 aaacagcttatgacatgcccataagctgttttcagcttatttccatgaactctgcaggatagctaatgcaaacagcttttagattatatgaaaaaagttc 27290990  T
Q  254 cactttatttta 265  Q
     | |||||||||    
T  27290991 gaatttatttta 27291002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 37273239 - 37273135
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 224  Q
    |||||||||||| ||||||||||||||||||    |||||||||||| || |||  ||||| | |||||||||||||  |||||| ||||||| || |||    
T  37273239 tgagactgtttgggagagcttatggaaacaa----cttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaa 37273144  T
Q  225 acagattat 233  Q
    |||| ||||    
T  37273143 acagtttat 37273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 24785279 - 24785174
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    ||||||||||||||| |||  ||||||||||||||| ||||| ||||| ||||||||| || ||||||  |||||| ||| |  |||| || || |||||    
T  24785279 cttatgacatgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaacacgttatagattatacaaaaacagattgacttt 24785180  T
Q  260 atttta 265  Q
    ||||||    
T  24785179 atttta 24785174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 265
Target Start/End: Original strand, 36646349 - 36646483
Alignment:
Q  127 agactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac 226  Q
    ||||| |||| |||||||||||||||| |    |||||| ||||| || |||| ||||| | |||||||| |||||||||| ||||||||| || |||||    
T  36646349 agactatttgggagagcttatggaaacca----cttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaac 36646444  T
Q  227 agattatagcttacatgaaaatagtttcactttatttta 265  Q
    |  ||||| |||| ||||||| | ||  |||||||||||    
T  36646445 aagttataacttatatgaaaacaattatactttatttta 36646483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 40122770 - 40122862
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||||||||||||||||| |||| |  ||||||||| |||||||||  |||||||||  ||||||| ||||| |||||||||||  |||||||    
T  40122770 gtttttagcttatttccattaactttttaggatagcttataaaaacaacttatagctt-tatgaaaacagtttgactttattttatcttttgtt 40122862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 38462334 - 38462250
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||| ||||||||||||||| || ||  |||||||| || ||||||| ||||||| || ||||||| ||||| |||||||||||    
T  38462334 gttttcagcttatttccataagctatcttggatagcttatgaaaacagtttatagcatatatgaaaacagtttgactttatttta 38462250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 37825196 - 37825129
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 227  Q
    |||||||||||| || |||  ||||| || |||||||||||| |||||||||| ||||||||||||||    
T  37825196 cttatgacatgtccataagttgttttcaggttatttccataagctctccaggaaagctaataaaaaca 37825129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 3044249 - 3044342
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaa 247  Q
    ||||| ||||||||||||||| |||| ||||| | ||||||| ||||| ||||||||| ||||  |  ||||||| |||||| ||| |||||||    
T  3044249 aaacaacttatgacatgttcataagctgttttcaacttattttcataagctctccaggttagcataagaaaacaggttatagattatatgaaaa 3044342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 32554999 - 32555091
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||||||||||| |||||||| || ||||||||| || || ||||||  |||||||||| | ||||||| ||| |||||||||||  |||||||    
T  32554999 gtttttagcttacttccataatct-tccaggataactcatgaaaacaacttatagcttataggaaaataatttgactttattttatcttttgtt 32555091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 36101648 - 36101587
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 215  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||| ||||| |||| ||||||||    
T  36101648 aaacagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaggatag 36101587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 50952413 - 50952352
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 215  Q
    ||||| ||||||||||||||| || | ||||| ||||||||||||||| ||||||| |||||    
T  50952413 aaacagcttatgacatgttcataaactgttttaagcttatttccataagctctccaagatag 50952352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 274
Target Start/End: Original strand, 20192596 - 20192716
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||||||||||| || |||| ||||| | || |||||||||| |||||| | |||  | | |||||||| |||||| ||| |||||||  ||||    
T  20192596 aaacagcttatgacatgtccataagctgttttcaactcatttccataagctctcccgaataagttacaaaaacagcttatagattatatgaaaactgttt 20192695  T
Q  254 cactttattttaaattttgtt 274  Q
     |||||||||||  |||||||    
T  20192696 gactttattttatcttttgtt 20192716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 20669244 - 20669172
Alignment:
Q  162 tatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattata 234  Q
    ||||||||||||| |||| |||||  |||||||| ||||| ||||||| ||||||| || ||||||| |||||    
T  20669244 tatgacatgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaacagcttata 20669172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 23785308 - 23785224
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||| ||||| ||||||||| ||||||| || ||||  | ||||||| |||||||||| ||||| | ||||| |||||||||||    
T  23785308 gttttcagcttgtttccataagctctccatgagagcttgtgaaaacagtttatagcttatatgaatacagtttgactttatttta 23785224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 48048981 - 48049045
Alignment:
Q  163 atgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 227  Q
    ||||||||| || |||| ||||| ||||||||||||||| ||| ||| |||||||||| ||||||    
T  48048981 atgacatgtccataagctgttttcagcttatttccataacctccccaagatagctaatgaaaaca 48049045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 32069201 - 32069119
Alignment:
Q  182 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||||||||||||| ||||| ||||||| ||||||| || ||||||| | |||||||  |||||| || ||| |||||||||||    
T  32069201 tttttagcttattttcataatctctccaagatagcttattaaaacagttgatagcttttatgaaatta-tttgactttatttta 32069119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 33725870 - 33725949
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||||||||||| | | || ||||| | |||||||| |||| || |||||||||| | |||||||||| ||||||||||    
T  33725870 cttatgacatgttgatatgctgttttcatcttatttctataagctttccaggatagtttataaaaacagtttatagctta 33725949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 264
Target Start/End: Original strand, 1217790 - 1217900
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||||||||||| || |||  ||||| | |||| || |||||  |||| ||||||||| || ||||||| ||||| |||||||||||| | |||    
T  1217790 aaacagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaattt 1217889  T
Q  254 cactttatttt 264  Q
     |||| |||||    
T  1217890 aacttcatttt 1217900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 41452633 - 41452494
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||| ||||| | ||||||||| ||||| |||||||    ||||||| ||||  | |||| ||||| | |||||||||| ||  |||||||||||||| |    
T  41452633 acttgtgagagtatttgagagaccttatagaaacaa----cttatgatatgtctataagctgttttcaccttatttccacaacttctccaggatagctta 41452538  T
Q  220 taaaaacagattatagcttacatgaaaatagtttcactttattt 263  Q
    | ||||||| ||| | || | ||||||| ||||| |||||||||    
T  41452537 tgaaaacagcttacaactaatatgaaaacagtttgactttattt 41452494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 1816657 - 1816552
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    |||||||||| |||| | || ||||| |||||||||  |||| |||||||| |||||| || ||||||  ||||| |||| |  |||| ||||| |||||    
T  1816657 cttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgacttt 1816558  T
Q  260 atttta 265  Q
    ||||||    
T  1816557 atttta 1816552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 2719515 - 2719431
Alignment:
Q  187 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttg 272  Q
    ||||||||| |||||  |||||| ||||||| || ||||||| |||||||||| |  |||| | ||||||||||||||| ||||||    
T  2719515 agcttattttcataagttctccaagatagcttatgaaaacagtttatagcttaaac-aaaacaatttcactttattttatattttg 2719431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 24158528 - 24158602
Alignment:
Q  189 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||||||||| ||||||||||||||| || ||||||| ||||  |||| ||  ||| |||||||||||| ||||    
T  24158528 cttatttccataagctctccaggatagcttatgaaaacagcttattacttatat--aaacagtttcactttacttta 24158602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 25453863 - 25453960
Alignment:
Q  168 atgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||| ||||  |||| ||||||||| ||||| || |||||||||| | || |||| || |||||| ||| | ||||| ||||| |||||||||||    
T  25453863 atgttcacaagctcttttcagcttattttcataagctttccaggatagtttatgaaaataggttataggttatacgaaaacagtttgactttatttta 25453960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 30923888 - 30923949
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 215  Q
    ||||| ||||||||||||  | |||| ||||| |||||||||| |||||||||| |||||||    
T  30923888 aaacagcttatgacatgtctataagctgttttcagcttatttctataaactctctaggatag 30923949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 36139958 - 36139897
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 215  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||| ||||| |||| || |||||    
T  36139958 aaacagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaagatag 36139897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 2923530 - 2923466
Alignment:
Q  182 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaa 246  Q
    ||||||||||||||  |||| |||| |||  ||||| || ||||||| |||||||||||||||||    
T  2923530 tttttagcttatttatataatctcttcagtgtagcttatgaaaacagcttatagcttacatgaaa 2923466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 25925816 - 25925764
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccagga 212  Q
    ||||||||||||||| |||| ||||| | ||||||| ||||| ||||||||||    
T  25925816 cttatgacatgttcataagctgttttcaacttattttcataagctctccagga 25925764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 36200176 - 36200108
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataa 222  Q
    ||||| |||||||||||| || |||  ||||| ||||||||||||| | |||| |||||||||| ||||    
T  36200176 aaacaacttatgacatgtccataagttgttttcagcttatttccatgagctctacaggatagcttataa 36200108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 45432936 - 45432988
Alignment:
Q  161 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggat 213  Q
    |||||||||||||| |||  ||||| ||||||||||||||| |||| ||||||    
T  45432936 ttatgacatgttcataagttgttttcagcttatttccataagctctacaggat 45432988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 48528630 - 48528562
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 228  Q
    |||||| ||||| || || | ||||| |||||||||| ||||||||||||| |||||| || |||||||    
T  48528630 cttatggcatgtccataaacagttttcagcttatttctataaactctccagaatagcttatgaaaacag 48528562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 265
Target Start/End: Complemental strand, 33942257 - 33942119
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 224  Q
    |||||||||||||||||||||||||| | |  || ||||||||||||||| |||| ||||| |||| |||| ||| | ||||| | ||| ||| || |||    
T  33942257 tgagactgtttgagagagcttatggagaga--caacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaa 33942160  T
Q  225 acagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||  |||||||||||||||||| ||||| |||||||||||    
T  33942159 acaacttatagcttacatgaaaacagtttgactttatttta 33942119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 274
Target Start/End: Original strand, 1939323 - 1939442
Alignment:
Q  155 aacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagct-tacatgaaaatagttt 253  Q
    |||| |||||||||||| || |||| ||||| | ||||||||||||| |||||||| |||||| || ||||||| ||||||||  | |||||||||||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaacag-ttatagctcaatatgaaaatagttt 1939421  T
Q  254 cactttattttaaattttgtt 274  Q
    ||||||||||||  |||||||    
T  1939422 cactttattttatcttttgtt 1939442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 276
Target Start/End: Original strand, 22681187 - 22681297
Alignment:
Q  166 acatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||||| |||| |||||||||||||||||||||  |||| ||||||| | || ||||||| |||||||||| ||||||| | |||  |||| |||||    
T  22681187 acatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgtttta 22681286  T
Q  266 aattttgtttt 276  Q
      |||||||||    
T  22681287 tcttttgtttt 22681297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 274
Target Start/End: Original strand, 1741996 - 1742142
Alignment:
Q  124 atgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaa 223  Q
    |||||||| |||| ||||||||||||||||||    |||||||||||| || ||||  | || | |||||||||||||||||| || ||||| | || ||    
T  1741996 atgagactatttgggagagcttatggaaacaa----cttatgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagattatgaa 1742091  T
Q  224 aacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||| ||||| |||| ||  ||| ||||| |||| |||||| ||||||||    
T  1742092 aacagcttatatcttatatataaagagtttgacttcattttatattttgtt 1742142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 35485991 - 35485886
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    ||||||| ||||||| |||| ||||| |||| |||||||||  |||| |||||||||| |||||||||  |||||||||| |   ||||||||| |||||    
T  35485991 cttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagcttataaaaacaacttatagcttataatgaaatagtttgacttt 35485892  T
Q  260 atttta 265  Q
    ||||||    
T  35485891 atttta 35485886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 44458334 - 44458439
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    |||||||||| | || |||  |||||||||||||||  |||||||||||| ||||||| ||| |||||| ||||||  ||||||||||||| || |||||    
T  44458334 cttatgacatatccataagttgtttttagcttatttatataaactctccatgatagcttatacaaacagcttatagtatacatgaaaatagcttgacttt 44458433  T
Q  260 atttta 265  Q
    | ||||    
T  44458434 agttta 44458439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 10198479 - 10198567
Alignment:
Q  163 atgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagt 251  Q
    |||||||||||| |||| ||| | ||||||||||||||| ||||| ||||||| | ||||||||||  |||| |||| |||||||||||    
T  10198479 atgacatgttcataagctgttgtcagcttatttccataatctctctaggatagattataaaaacagcctatatcttatatgaaaatagt 10198567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 43173295 - 43173191
Alignment:
Q  161 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 260  Q
    ||||||||||| || | || ||||| | |||||||||||||  |||||| ||||||  ||||||||| | ||||||||| ||||||||| ||| ||||||    
T  43173295 ttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaaaatatagcttatatgaaaataatttgacttta 43173196  T
Q  261 tttta 265  Q
    |||||    
T  43173195 tttta 43173191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 27237883 - 27237938
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctcca 209  Q
    ||||| |||||||||||| || |||| |||||||||||||||||||||||||||||    
T  27237883 aaacagcttatgacatgtacataagctgtttttagcttatttccataaactctcca 27237938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 7103499 - 7103584
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaat-aaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||||||||||| || |||||||| | ||||||| || |||||||| |||||||||| || |||| ||||| |||||||||||    
T  7103499 gtttttagcttattttcacaaactctctaagatagcttatgaaaaacagcttatagcttatattaaaacagtttgactttatttta 7103584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 274
Target Start/End: Original strand, 18962035 - 18962148
Alignment:
Q  162 tatgacatgttcaaaagccgtttttagctt-atttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 260  Q
    |||||||||||||   || ||||| ||||| |||||||||  ||||||| ||||||| || |||| || |||||||||| ||||||| ||||| ||||||    
T  18962035 tatgacatgttcatgtgctgttttcagctttatttccatagtctctccatgatagcttatgaaaatagtttatagcttatatgaaaacagtttaacttta 18962134  T
Q  261 ttttaaattttgtt 274  Q
    |||||  |||||||    
T  18962135 ttttatcttttgtt 18962148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 274
Target Start/End: Original strand, 37292380 - 37292457
Alignment:
Q  197 cataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||||||||||||||||||| |  ||||||  | |||||||| ||||||||||||| |||||||||||  |||||||    
T  37292380 cataaactctccaggatagcttaagaaaacaactaatagcttatatgaaaatagttttactttattttatcttttgtt 37292457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 266
Target Start/End: Original strand, 6167305 - 6167385
Alignment:
Q  186 tagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaa 266  Q
    ||||||||||||||||  ||||||  |||||| |||||||||| |||||||||| | ||||  | ||||||||||||||||    
T  6167305 tagcttatttccataagttctccaaaatagcttataaaaacagcttatagcttaaacgaaagcaatttcactttattttaa 6167385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 265
Target Start/End: Complemental strand, 9478401 - 9478268
Alignment:
Q  128 gactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 227  Q
    ||||||||||||||| |||||    |||||| ||||| |||||| || |||| ||||| | |||| |||||| ||||||||| ||||||| |  || |||    
T  9478401 gactgtttgagagagtttatg----caaacaacttattacatgtccataagctgttttcatcttacttccatcaactctccacgatagcttacgaacaca 9478306  T
Q  228 gattatagcttacatgaaaatagtttcactttatttta 265  Q
    |  ||||||||| ||||||||| ||| | |||||||||    
T  9478305 gcatatagcttatatgaaaatattttgagtttatttta 9478268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 17952723 - 17952811
Alignment:
Q  187 agcttatttccataaactc-tccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||||||||||||  |||| |||||||||||| || ||||||  || ||||||| ||||||||||||| |||||||||||  |||||||    
T  17952723 agcttatttccatgcactcctccaggatagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatcttttgtt 17952811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 29316765 - 29316876
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||||||||||||| |||   |||| |||||||||||||||  |||||| ||||||| || ||||||| |||||| |||  |||||| | |||    
T  29316765 aaacagcttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatgtgaaaacaattt 29316864  T
Q  254 cactttatttta 265  Q
     || ||||||||    
T  29316865 aaccttatttta 29316876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 15120283 - 15120200
Alignment:
Q  130 ctgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 217  Q
    ||||||| ||||||||||||||||||    |||||||||||||||  ||| ||||| |||||||||  |||| ||||||| |||||||    
T  15120283 ctgtttgggagagcttatggaaacaa----cttatgacatgttcattagctgttttaagcttattttgataagctctccatgatagct 15120200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 41817248 - 41817187
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 215  Q
    ||||||||||||||||||| | ||   ||||| ||||||||||||||| |||||||||||||    
T  41817248 aaacatcttatgacatgttgataatttgttttcagcttatttccataagctctccaggatag 41817187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 43205354 - 43205281
Alignment:
Q  189 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatt 262  Q
    ||||||||||||| ||||||  ||||||| || ||||||||||||| |||| ||||||| |||||  |||||||    
T  43205354 cttatttccataagctctccgtgatagcttatgaaaacagattatatcttatatgaaaacagtttggctttatt 43205281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 43985289 - 43985160
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||||||||||| || ||||  |||| | ||| ||||||||| |||| || | ||||| | ||||||| |||||||||||||  | || | |||    
T  43985289 aaacaacttatgacatgtccataagcttttttcaacttgtttccataagctcttcacggtagcttacaaaaacaaattatagcttacactataacaattt 43985190  T
Q  254 cactttattttaaattttgttttggaagta 283  Q
     ||||||| |||||||||||| | ||||||    
T  43985189 aactttatattaaattttgttatagaagta 43985160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 3067391 - 3067443
Alignment:
Q  176 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 228  Q
    |||||||||||||||||||| |||||||||| || ||||||| || |||||||    
T  3067391 aagccgtttttagcttattttcataaactcttcaagatagcttatgaaaacag 3067443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 3078657 - 3078709
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattat 233  Q
    |||||||||||||||||| || ||||||| ||||||| |||||||||| ||||    
T  3078657 gtttttagcttatttccagaagctctccaagatagcttataaaaacagcttat 3078709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 11513950 - 11513858
Alignment:
Q  182 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||| |||||||||||| ||  |||||| ||||||| || ||||||  |||||||||| ||||||| | ||| |||||||||||  |||||||    
T  11513950 ttttcagcttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttgtt 11513858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 34651996 - 34652089
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 217  Q
    |||| |||||| ||| |||| ||||||| |||||||    |||||||||||| || |||| ||||| | ||||||||||||| ||||||| |||||||    
T  34651996 acttgtgagacggttggagaaagcttatagaaacaa----cttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagct 34652089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 41809205 - 41809282
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataa 201  Q
    |||| |||||||| |||  ||||||| |||||||||    ||||||||||||||| |||  |||||||||||||||||||||    
T  41809205 acttgtgagactgattgtaagagcttgtggaaacaa----cttatgacatgttcataagttgtttttagcttatttccataa 41809282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 32821889 - 32821806
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagct 237  Q
    ||||| |||||||||||| || |||| ||||| || ||||||| |||| ||||  ||||||||| || ||||||| ||||||||    
T  32821889 aaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtttatagct 32821806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 265
Target Start/End: Complemental strand, 33256820 - 33256709
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||||||||||||| || | ||| | ||||||||| ||||   ||| |||||| ||| || ||||| | |||||| ||| ||||||| |||||    
T  33256820 aaacagcttatgacatgttcataaactgttctcagcttattttcatacggtcttcaggatggcttatgaaaactgcttatagtttatatgaaaacagttt 33256721  T
Q  254 cactttatttta 265  Q
     |||||||||||    
T  33256720 gactttatttta 33256709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 43141915 - 43141840
Alignment:
Q  190 ttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||||||||||||| |||||||||| || ||||||  |||||||||| ||| ||| | ||| |||||| ||||    
T  43141915 ttatttccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaacaatttgactttacttta 43141840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 44438829 - 44438940
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||||||||||||| || | ||||| |||||||||||| ||  ||||||||||| || || || |||| |||| ||||  |  |||| |||||    
T  44438829 aaacagcttatgacatgttcataacctgttttcagcttatttccacaagatctccaggataacttatgaagacagcttatggcttgtacaaaaacagttt 44438928  T
Q  254 cactttatttta 265  Q
     |||||||||||    
T  44438929 gactttatttta 44438940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 248
Target Start/End: Original strand, 18179230 - 18179324
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaat 248  Q
    |||||||||| ||||||| ||  |||  |||| ||||||||| | |||  |||||||||||||| || ||| ||| |||||||||| ||||||||    
T  18179230 aaacatcttaagacatgtccattagctattttcagcttattttcgtaagttctccaggatagcttatgaaagcagcttatagcttatatgaaaat 18179324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 1647316 - 1647263
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctc 207  Q
    ||||| ||||||||||| ||| |||| ||||| ||||||||||||||| |||||    
T  1647316 aaacagcttatgacatgctcataagctgttttcagcttatttccataagctctc 1647263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 6993720 - 6993825
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    |||||| ||||| || ||| | |||||||||||||| ||||| ||||| || |||||| || ||||||   ||||||||| ||||| ||| ||| || ||    
T  6993720 cttatggcatgtccataagtcatttttagcttattttcataagctctcaagcatagcttatgaaaacaacctatagcttatatgaatataatttgacctt 6993819  T
Q  260 atttta 265  Q
    ||||||    
T  6993820 atttta 6993825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 31228834 - 31228887
Alignment:
Q  161 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggata 214  Q
    |||||||||||  | |||| |||||||| |||||||||||||||||||| ||||    
T  31228834 ttatgacatgtatataagctgtttttaggttatttccataaactctccatgata 31228887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 8820282 - 8820334
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactct 206  Q
    ||||| ||| ||||||||||| |||| ||||| ||||||||||||||| ||||    
T  8820282 aaacagcttctgacatgttcacaagctgttttcagcttatttccataagctct 8820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 12215881 - 12215805
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagc 236  Q
    |||||||||||| || |||| ||||| | | |||| |||||| ||||| ||||| ||| |||||||||| |||||||    
T  12215881 cttatgacatgtccataagctgttttcaccatattcccataagctctcaaggatggcttataaaaacagcttatagc 12215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 258
Target Start/End: Complemental strand, 25790206 - 25790102
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||| ||||||||  |||| ||||| | ||||||| ||||| ||||||||||||| | ||  |||||  || ||||||| ||||||| |||||    
T  25790206 aaacagcttattacatgttcctaagctgttttgaacttattttcataagctctccaggatagattatccaaacaatttgtagcttatatgaaaacagttt 25790107  T
Q  254 cactt 258  Q
     ||||    
T  25790106 gactt 25790102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 32848958 - 32848898
Alignment:
Q  184 tttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatga 244  Q
    ||||||||||||||||||| ||||| | |||||| || |||| || |||||||||| ||||    
T  32848958 tttagcttatttccataaattctccggtatagcttatgaaaatagtttatagcttatatga 32848898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 36863650 - 36863726
Alignment:
Q  189 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||| ||||| ||||||| ||||||| || ||||||  ||||| |||| || ||||| |||| |||||||||||    
T  36863650 cttattttcataagctctccaagatagcttatgaaaacaatttataacttatataaaaattgtttgactttatttta 36863726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 42817393 - 42817477
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||||||||||| |||||||| |||| ||| |||||| || ||||||| ||||  |||| ||||||| || || |||| ||||||    
T  42817393 gtttttagcttacttccataagctcttcagaatagcttatgaaaacagtttattacttatatgaaaacagcttgacttcatttta 42817477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 43259892 - 43259840
Alignment:
Q  176 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 228  Q
    |||| ||||||||||||||||||||| |||| || |||| ||||| |||||||    
T  43259892 aagctgtttttagcttatttccataagctcttcaagatacctaatgaaaacag 43259840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 44238053 - 44238109
Alignment:
Q  183 ttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||||||||||||||||||||||||| |||| ||  | ||||||  ||||||||||    
T  44238053 ttttagcttatttccataaactctccatgataacttctgaaaacaacttatagctta 44238109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 44439408 - 44439476
Alignment:
Q  212 atagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 280  Q
    |||||| |||||||||  |||||||||| |  |||| ||||| ||||||||||| |||||||| |||||    
T  44439408 atagcttataaaaacaatttatagcttatacaaaaacagtttaactttattttatattttgttatggaa 44439476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 265
Target Start/End: Complemental strand, 29973162 - 29973050
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgttttt-agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtt 252  Q
    ||||| |||| ||||||| ||||||| | |||| || |||||||||||||||||| ||||||||| || ||||||  ||||||||||  |||||||||||    
T  29973162 aaacaacttacgacatgtccaaaagctggttttcagtttatttccataaactctcaaggatagcttatgaaaacaacttatagcttatgtgaaaatagtt 29973063  T
Q  253 tcactttatttta 265  Q
    | |||||||||||    
T  29973062 tgactttatttta 29973050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 28769356 - 28769449
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||| |||||||||||||||||||||||  |||||| || ||||||| |||||||||| | ||||||||||| |||| |||||| | ||||||    
T  28769356 gttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaatagtttgacttaattttatagtttgtt 28769449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 265
Target Start/End: Original strand, 30191108 - 30191242
Alignment:
Q  127 agactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac 226  Q
    |||||||||| ||||||||||||||||||    ||||||||||||||||||   ||||| |||||||||||||||||  | |||||||||| || ||||     
T  30191108 agactgtttgggagagcttatggaaacaa----cttatgacatgttcaaaacttgttttcagcttatttccataaacatttcaggatagcttatcaaaat 30191203  T
Q  227 agattatagcttacatgaaaatagtttcactttatttta 265  Q
    || |||||| ||| |||  |  ||||| |||||||||||    
T  30191204 agcttatagattatatgtgagcagtttgactttatttta 30191242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 20672824 - 20672756
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 228  Q
    ||||||||||||||| |||| ||||| ||||||||| ||||| ||||||||||||||| ||||||||||    
T  20672824 cttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaacag 20672756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 283
Target Start/End: Original strand, 39551199 - 39551328
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||||||||||| ||||||| ||||||| |||||||  |||| |||||||||| |||| || ||||||  |||||||||  ||||| | |||||    
T  39551199 aaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaacaacttatagcttgtatgaagacagttt 39551298  T
Q  254 cactttattttaaattttgttttggaagta 283  Q
      ||||||||||  |||| || ||||||||    
T  39551299 agctttattttatcttttattatggaagta 39551328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 4558851 - 4558767
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||||||| |||||||||||| ||||| ||||||||| ||  |||||| ||||||| || ||||||||| ||| |||||||||||    
T  4558851 gtttttagtttatttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaataatttaactttatttta 4558767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 42215296 - 42215407
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||||||| |||||| |||| ||||| ||||||||| ||||| ||||||||||||||  || |||| || |||||| ||| |  |||| |||||    
T  42215296 aaacagcttatgacttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggttatagattatacaaaaacagttt 42215395  T
Q  254 cactttatttta 265  Q
     |||||||||||    
T  42215396 gactttatttta 42215407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 31705143 - 31705073
Alignment:
Q  176 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaa 246  Q
    |||| ||||| ||||||||||||||||||||| |||| |||| || ||||||| |||||||||| ||||||    
T  31705143 aagctgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagcttatatgaaa 31705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 11569417 - 11569527
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||| ||||||||||| ||||||||||||||||||     |||||||||||| || |||  ||||| ||||||||| || || ||||||| ||||||| |    
T  11569417 acttgtgagactgtttaagagagcttatggaaacag----cttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagctta 11569512  T
Q  220 taaaaacagattata 234  Q
    | ||||||| |||||    
T  11569513 tgaaaacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 38036129 - 38036222
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||| |||||||||| |||| ||||||| |||||||||| ||||||| ||||||||||||  |||| | ||| | |||||||||  |||||||    
T  38036129 gttttcagcttatttcaataagctctccaagatagctaatcaaaacagtttatagcttacacaaaaacaatttgaatttattttattttttgtt 38036222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 42370378 - 42370471
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||| |||||||||||||||||||| || ||||||| || | ||||| |||||||| | |  |||||||||| |||||| |||| ||||||||    
T  42370378 gttttcagcttatttccataaactcttcatgatagcttatgagaacagtttatagctcataaaaaaatagtttgactttactttatattttgtt 42370471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 260
Target Start/End: Original strand, 10075551 - 10075647
Alignment:
Q  164 tgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 260  Q
    ||||||||| | |||| | ||||||||||||| ||||| ||||| ||||||||| || |||| || ||||| |||| || |||||||||| ||||||    
T  10075551 tgacatgttgacaagctgcttttagcttattttcataagctctctaggatagcttatgaaaatagcttataacttatataaaaatagtttgacttta 10075647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 41606893 - 41606953
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggata 214  Q
    ||||| |||||||||||||||||||  ||||| ||||||||||||||| ||||| ||||||    
T  41606893 aaacagcttatgacatgttcaaaagttgttttcagcttatttccataagctctctaggata 41606953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 2093331 - 2093248
Alignment:
Q  182 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||||||||||| |||||| || ||||||||||||| ||||||  |||||||||| | |||||   ||| |||||||||||    
T  2093331 tttttagcttatttctataaacgcttcaggatagctaatgaaaacaacttatagcttaaaagaaaaccatttgactttatttta 2093248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 6864477 - 6864560
Alignment:
Q  182 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||| |||||||||||  || |||||||  |||||| || ||||||  ||||| |||||||||||||||||| |||||||||||    
T  6864477 ttttcagcttatttcctcaagctctccaaaatagcttatgaaaacaacttataacttacatgaaaatagtttgactttatttta 6864560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 29262864 - 29262975
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||||||||||||| ||||  |||| |  | |||||| ||||||||| ||||| || ||| ||| ||| ||| |||||| ||||||||| |||    
T  29262864 aaacaacttatgacatgttcataagctattttcaagtaatttccgtaaactctctaggattgcaaatgaaatcagcttacagcttatatgaaaataattt 29262963  T
Q  254 cactttatttta 265  Q
     |||||||||||    
T  29262964 gactttatttta 29262975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 44865589 - 44865648
Alignment:
Q  189 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaat 248  Q
    ||||||||||||||||||| || |||||| |||||| ||| |||||||||| ||||||||    
T  44865589 cttatttccataaactctctagtatagcttataaaaccagcttatagcttatatgaaaat 44865648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 3254305 - 3254235
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 224  Q
    ||||| ||||||||||||||| |||| ||||| |||||||||| ||| |||||  ||||||||| ||||||    
T  3254305 aaacagcttatgacatgttcataagctgttttcagcttatttctatacactctataggatagcttataaaa 3254235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 5069800 - 5069697
Alignment:
Q  127 agactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac 226  Q
    ||||||||||||||||||||||||    |||||||||| ||||||||| ||| | |||| ||||||||| ||||| || || | |||| || || |||||    
T  5069800 agactgtttgagagagcttatgga----aacatcttataacatgttcataagtcattttcagcttattttcataagctttcgaagatatcttatgaaaac 5069705  T
Q  227 agattata 234  Q
    || |||||    
T  5069704 agcttata 5069697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 11795166 - 11795064
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    |||||||||||| || || | ||||| ||||||||||||||| |||||||  |||||| || ||| ||| ||||| |||| ||||||| ||| | |||||    
T  11795166 cttatgacatgtccataacctgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttatatgaaaacagtgtgacttt 11795067  T
Q  260 att 262  Q
    |||    
T  11795066 att 11795064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 9836882 - 9836955
Alignment:
Q  192 atttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||||||||| ||||||| ||||||| || ||||||| || || |||| ||||||||||||| |||||| ||||    
T  9836882 atttccataagctctccaagatagcttatgaaaacaggttgtaacttatatgaaaatagtttgactttacttta 9836955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 12361266 - 12361161
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    |||||||||||| || |||| ||||| | ||||||||||| | |||||| | ||| || || ||||||| |||||||||| ||||||| | ||| ||||     
T  12361266 cttatgacatgtccataagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaacaatttgacttc 12361167  T
Q  260 atttta 265  Q
    ||||||    
T  12361166 atttta 12361161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 30277262 - 30277315
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattata 234  Q
    ||||| ||||||||||||||||||||| ||||||||| || ||||||| |||||    
T  30277262 gttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 926555 - 926511
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttcca 198  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||||    
T  926555 aaacaacttatgacatgttcataagccgttttcagcttatttcca 926511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 6509328 - 6509404
Alignment:
Q  189 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||||||| |||| ||||||||||||||| || ||||||| |||||||||| || || | | ||| |||||||||||    
T  6509328 cttatttcaataagctctccaggatagcttatgaaaacagcttatagcttatataaatacaatttgactttatttta 6509404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 7918790 - 7918874
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||| |||||||||||| || |||| || ||||||| || ||||||  |||||||||||| ||||| | ||| |||||||||||    
T  7918790 gttttcagcttatttccacaagctctacaagatagcttatgaaaacaacttatagcttacaagaaaaaaatttaactttatttta 7918874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 25869262 - 25869318
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagc 216  Q
    |||||||||||| || |||  ||||| ||||||||||||||||||||||| ||||||    
T  25869262 cttatgacatgtccataagttgttttcagcttatttccataaactctccatgatagc 25869318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 26410390 - 26410301
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagctt-atttccataaactctccagga 212  Q
    |||| |||||||| ||| |||||||||||||||||     || ||||||||| || |||| ||||||||||| |||||||||| ||||||||||    
T  26410390 acttctgagactgcttgggagagcttatggaaacag----ctcatgacatgtccagaagctgtttttagctttatttccataagctctccagga 26410301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 43504831 - 43504747
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctt 238  Q
    ||||| |||| ||| |||| | |||| ||||| |||||||||||||||  |||||| ||||||| |||||||||  |||||||||    
T  43504831 aaacaacttacgacttgtttataagctgttttcagcttatttccataagttctccaagatagcttataaaaacatcttatagctt 43504747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 11183625 - 11183542
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagct 237  Q
    ||||| ||||||| ||||  | |||| ||||| ||||||||||||||| ||||||||| |||||  | ||||||| ||||||||    
T  11183625 aaacaacttatgatatgtctataagctgttttcagcttatttccataagctctccagggtagcttgtgaaaacagcttatagct 11183542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 27728039 - 27728122
Alignment:
Q  182 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||||||||||||||||| | | ||| ||||||||| || ||||||  | |||  ||| ||||||||||||| |||||||||||    
T  27728039 tttttagcttatttccatcatccctctaggatagcttatgaaaacaactaatactttatatgaaaatagtttgactttatttta 27728122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 7646031 - 7645965
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaa 247  Q
    ||||| ||||||||||||||| || | |||| ||||| || ||||||  ||||||||||||||||||    
T  7646031 gttttcagcttatttccataagctttacaggttagcttatgaaaacaacttatagcttacatgaaaa 7645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 7918412 - 7918499
Alignment:
Q  126 gagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 217  Q
    ||||||||||| ||||||||||| ||||||    |||| |||||||||| |||| ||||  | |||||||| |||| ||||||| |||||||    
T  7918412 gagactgtttgggagagcttatgaaaacaa----cttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagct 7918499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 8062382 - 8062324
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||| ||||||||||||||| ||||| | ||||||| || ||||||| ||||||||||    
T  8062382 gttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagctta 8062324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 21653155 - 21653041
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    ||||||||| ||||| ||||  |||| ||||||||| ||||| ||||||| |||||||||| ||| ||  || |||| |||| ||||  | ||| |||||    
T  21653155 cttatgacacgttcataagctattttcagcttattttcataagctctccaagatagctaatgaaagcaatttgtagcctacacgaaatcaatttaacttt 21653056  T
Q  260 attttaaattttgtt 274  Q
    ||||||  |||||||    
T  21653055 attttatcttttgtt 21653041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 29973251 - 29973168
Alignment:
Q  131 tgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagc-cgtttttagcttatttccataaactctccaggatagct 217  Q
    |||||||||||||||||||||||||    ||||  |||||| |||||||  ||||| || ||||||||||||| |||| |||||||||    
T  29973251 tgtttgagagagcttatggaaacaa----cttacaacatgtccaaaagctggttttcagtttatttccataaattctcaaggatagct 29973168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 30987956 - 30988067
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgttttt-agcttatttccataaactctccaggatagctaataaa 223  Q
    |||| ||||||||||||||||||||||||||    |||||||||||| || ||||  ||||| || ||| |||||||| | ||| | ||||||| | |||    
T  30987956 tgagtctgtttgagagagcttatggaaacaa----cttatgacatgtccataagctatttttcagtttagttccataagccctcaaagatagcttacaaa 30988051  T
Q  224 aacagattatagctta 239  Q
    ||||| ||||| ||||    
T  30988052 aacagcttataactta 30988067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 34770931 - 34770861
Alignment:
Q  195 tccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||| ||||||| ||||||||| || ||||||  |||||||||| ||||||| | ||| |||||||||||    
T  34770931 tccatgaactctctaggatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttatttta 34770861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 39881769 - 39881815
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaaca 227  Q
    ||||| ||||||||||||||| ||||||| ||||||| |||||||||    
T  39881769 gttttcagcttatttccataagctctccatgatagcttataaaaaca 39881815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 2235653 - 2235698
Alignment:
Q  161 ttatgacatgttcaaaagccgtttttagcttatttccataaactct 206  Q
    |||||||||||||| ||| ||||||||||| |||||||||| ||||    
T  2235653 ttatgacatgttcataagtcgtttttagctcatttccataagctct 2235698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 2458562 - 2458619
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 217  Q
    |||||| |||||||| |||| ||||| || |||||||||||| ||||| |||||||||    
T  2458562 cttatggcatgttcataagctgttttcagtttatttccataagctctctaggatagct 2458619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 11185301 - 11185236
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    ||||||||||| ||||||||| |||  ||||| | ||||||||||| | ||||||| |||||||||    
T  11185301 aaacatcttataacatgttcataagttgttttcaacttatttccatcagctctccatgatagctaa 11185236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 30013270 - 30013189
Alignment:
Q  182 tttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattt 263  Q
    |||| ||||||||||||| |  ||| |||||||||| || ||||||| |||||||||| ||| ||| ||||| |||| ||||    
T  30013270 ttttcagcttatttccattagttctacaggatagcttatgaaaacagcttatagcttatatggaaacagtttgacttaattt 30013189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 2487968 - 2488037
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttat 193  Q
    |||| |||||||||||| |||| |||||| ||||||    ||||| |||||||||||| | |||||||||||||    
T  2487968 acttgtgagactgtttgggagaacttatgaaaacaa----cttataacatgttcaaaaactgtttttagcttat 2488037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 2493010 - 2492958
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccagga 212  Q
    ||||| ||||||||| |||  |||||| |||||||||||||||| ||||||||    
T  2493010 cttataacatgttcataagttgttttttgcttatttccataaaccctccagga 2492958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 5227586 - 5227530
Alignment:
Q  183 ttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||||||||||| ||||| |||| || ||||||| | |||||||| ||||||||||    
T  5227586 ttttagcttattttcataagctcttcatgatagcttacaaaaacagcttatagctta 5227530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 7853722 - 7853686
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaa 156  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  7853722 acttatgagaccgtttgagaaagcttatggaaacaaa 7853686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 152
Target Start/End: Complemental strand, 21130722 - 21130690
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaa 152  Q
    |||| ||||||||||||||||||||||||||||    
T  21130722 acttgtgagactgtttgagagagcttatggaaa 21130690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 29169121 - 29169185
Alignment:
Q  188 gcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtt 252  Q
    ||||||||||||||||||| ||||||| || | |||||||| || ||||| | ||||||| ||||    
T  29169121 gcttatttccataaactcttcaggataacttacaaaaacagcttgtagctcatatgaaaaaagtt 29169185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 31875564 - 31875637
Alignment:
Q  129 actgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactct 206  Q
    ||||||||||| |||||||||||||||    |||||||||||| || ||||| |||| | ||||||| ||||| ||||    
T  31875564 actgtttgagaaagcttatggaaacaa----cttatgacatgtccataagccattttcaacttattttcataagctct 31875637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 34849176 - 34849072
Alignment:
Q  161 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 260  Q
    |||||||||||||| |||||||||| |||| ||||||||||  ||| || || |||| || | ||||| ||||| |||| |  |||||| | | ||||||    
T  34849176 ttatgacatgttcataagccgttttcagctgatttccataagttctacaagaaagcttatgataacagcttatatcttatacaaaaataatgtgacttta 34849077  T
Q  261 tttta 265  Q
    |||||    
T  34849076 tttta 34849072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 43709316 - 43709260
Alignment:
Q  191 tatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaa 247  Q
    ||||| ||||| ||||||||||||||| || ||||||  ||||||||||| ||||||    
T  43709316 tattttcataagctctccaggatagctcatgaaaacaacttatagcttacgtgaaaa 43709260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 265
Target Start/End: Original strand, 48157085 - 48157221
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 224  Q
    |||||||||||| |||||||||| |||||||    |||||| ||||| || |||| ||||| |||||||||||||||  ||||| | ||||||  | |||    
T  48157085 tgagactgtttgggagagcttatagaaacaa----cttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaa 48157180  T
Q  225 acagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||| ||||||||||| || |||| | |||||||||||||||    
T  48157181 acaaattatagcttatattaaaacaatttcactttatttta 48157221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 274
Target Start/End: Complemental strand, 28165201 - 28165051
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||||||||||| ||||||| ||||||||||||||     || | ||| |||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |    
T  28165201 acttatgagactctttgagatagcttatggaaacag----ctcaagacctgttcataagctgttttcaacttatttccataagctctccatgatagctta 28165106  T
Q  220 taaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||| |||| |||||||||| || |||| | ||| |||| ||||||  |||||||    
T  28165105 taaagacagtttatagcttatattaaaacaatttgacttcattttatcttttgtt 28165051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 33645918 - 33646049
Alignment:
Q  118 aaacttatgagactgtttg-agagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagc 216  Q
    |||||| |||||||| ||| |||||||||||||||||||    ||||||||||||  | |||  |||||||| |||||||||||| ||||||| ||||||    
T  33645918 aaacttgtgagactggttggagagagcttatggaaacaa----cttatgacatgtctataagttgtttttaggttatttccataagctctcca-gatagc 33646012  T
Q  217 taataaaaacagattatagctt-acatgaaaatagtt 252  Q
    | || ||||||| ||||||||| | ||||||||||||    
T  33646013 ttatgaaaacagtttatagcttaatatgaaaatagtt 33646049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 276
Target Start/End: Complemental strand, 38010782 - 38010672
Alignment:
Q  166 acatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||||| |||| |||||||||||||||||||||  |||| ||||||| | || ||||||| |||||||||| ||||||| | |||  |||| |||||    
T  38010782 acatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgtttta 38010683  T
Q  266 aattttgtttt 276  Q
      |||||||||    
T  38010682 tcttttgtttt 38010672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 36598321 - 36598388
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttc 196  Q
    ||||| |||||||||||||||||||||||    ||||||||||||||||| |||| ||||| ||||||||||    
T  36598321 tgagattgtttgagagagcttatggaaac----atcttatgacatgttcataagctgttttcagcttatttc 36598388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 265
Target Start/End: Original strand, 40688993 - 40689087
Alignment:
Q  171 ttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||| |||| ||||| ||||||||| |||||  | |||||||||||| || || |||| |||||||||| ||||||||| ||| |||||||||||    
T  40688993 ttcataagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttatttta 40689087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 262
Target Start/End: Original strand, 44151436 - 44151578
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||| ||||| | |||||||||||||||| ||||||   | ||||||||||| || |||  ||||| ||||||||||||||| || | || ||||| | |    
T  44151436 acttgtgagattatttgagagagcttatgaaaacaatttttttatgacatgtccataagatgttttcagcttatttccataagcttttcaagatagttta 44151535  T
Q  220 taaaaacagattatagcttacatgaaaatagtttcactttatt 262  Q
    | ||||||  |||||||||| ||| ||| ||||| ||||||||    
T  44151536 tgaaaacaacttatagcttatatggaaacagttttactttatt 44151578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 274
Target Start/End: Original strand, 17989049 - 17989133
Alignment:
Q  190 ttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||||| ||||| |||| ||||| |||| || |||||| ||||||| ||| ||||||| ||||| ||||||||||| ||||||||    
T  17989049 ttattttcataagctcttcaggagagcttatgaaaacaaattatagtttatatgaaaacagtttgactttattttatattttgtt 17989133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 23721553 - 23721469
Alignment:
Q  187 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaatttt 271  Q
    ||||||||||||||| | | | ||||||||| |||||||||  |||||| ||| ||||||||||||| |||||||| ||| ||||    
T  23721553 agcttatttccataagcgcacaaggatagcttataaaaacaacttatagtttaaatgaaaatagtttgactttattctaactttt 23721469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 30812195 - 30812143
Alignment:
Q  187 agcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||    
T  30812195 agcttatttccataagctctccatgatagctaatgaaaacagcttatagctta 30812143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 265
Target Start/End: Complemental strand, 12110440 - 12110329
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||||||||||||| || | |||||||| |||||| |||||  ||| || ||||||| || ||||||| |||||||||| |  |||| | |||    
T  12110440 aaacaacttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaattt 12110341  T
Q  254 cactttatttta 265  Q
     |||||||||||    
T  12110340 gactttatttta 12110329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 28702829 - 28702731
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||||||||||||| |||| ||||  | ||||||||||| | ||| ||||||||||| || |||||||  |||| |||||||||||| |||||    
T  28702829 aaacaacttatgacatgttcataagcggtttgaa-cttatttccatgagctcgccaggatagcttatgaaaacagtgtataacttacatgaaaacagttt 28702731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 44615094 - 44615180
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttac 240  Q
    ||||| |||||||||||| || |||| ||||| |  |||||||||||||||||| ||| || || || ||||||| |||||||||||    
T  44615094 aaacaacttatgacatgtccacaagctgttttcacgttatttccataaactctcaaggctaacttatgaaaacagtttatagcttac 44615180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 24363601 - 24363702
Alignment:
Q  164 tgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattt 263  Q
    |||||||| || |||  ||||| ||||||||||||||| ||||||||||||||| || ||||||  ||||| | |  |||||||||| || ||| |||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttataacctgtatgaaaatagattgactctattt 24363700  T
Q  264 ta 265  Q
    ||    
T  24363701 ta 24363702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 47177687 - 47177606
Alignment:
Q  183 ttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttt 264  Q
    ||||||||||||| |||||| |||||| |||||||  | ||||||| |||||||||| ||||||| | ||| ||||| ||||    
T  47177687 ttttagcttattttcataaattctccaagatagcttttgaaaacagcttatagcttatatgaaaacaatttaactttgtttt 47177606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 27378845 - 27378929
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||| || |||||| ||||| ||||||||||||| | || |||||||||| ||| ||| ||||||| ||||  |||||||||||    
T  27378845 gttttcagtttattttcataagctctccaggatagtttatgaaaacagattgtagtttatatgaaaacagttctactttatttta 27378929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 46056027 - 46056087
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttaca 241  Q
    ||||||||||||||||||||| |||| | |||||||| || ||||||  ||||||||||||    
T  46056027 gtttttagcttatttccataagctctacgggatagcttatgaaaacaatttatagcttaca 46056087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 5006540 - 5006619
Alignment:
Q  195 tccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||| ||||||||||| ||||| || ||||||  ||||| |||| ||||||| ||||| |||||||||||  |||||||    
T  5006540 tccatgaactctccagggtagcttatgaaaacaatttataccttatatgaaaacagtttgactttattttatcttttgtt 5006619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 9423591 - 9423658
Alignment:
Q  161 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 228  Q
    |||||||||||||| |||  ||||| |||||||||| | || ||||||||||||||| || |||||||    
T  9423591 ttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaacag 9423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 12234879 - 12234950
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaa 225  Q
    ||||| ||||||||||||  | |||| ||||| ||||||||||||||| ||||| |||| |||| |||||||    
T  12234879 aaacaacttatgacatgtctataagctgttttcagcttatttccataagctctctaggaaagctcataaaaa 12234950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 22387861 - 22387941
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctcca 209  Q
    |||||||||||| ||||||||||| ||||||    |||||| |||||| | || | ||||||| ||||||||||||| |||||||    
T  22387861 tgagactgtttgggagagcttatgaaaacaa----cttatggcatgtttataaactgtttttaacttatttccataagctctcca 22387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 29363562 - 29363487
Alignment:
Q  190 ttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||||||||||| |||||||||||| || || | ||||| ||||| || | ||||||| ||||| |||||||||||    
T  29363562 ttatttccataagctctccaggataacttatgataacagcttataactaatatgaaaacagtttgactttatttta 29363487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 154
Target Start/End: Original strand, 39591457 - 39591492
Alignment:
Q  119 aacttatgagactgtttgagagagcttatggaaaca 154  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39591457 aacttatgagattgtttgagagagcttatggaaaca 39591492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 40439112 - 40439061
Alignment:
Q  176 aagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 227  Q
    |||| ||||||| ||||||||||||| |||| ||||||||||||| ||||||    
T  40439112 aagctgtttttaacttatttccataagctcttcaggatagctaatgaaaaca 40439061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 27517852 - 27517898
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactct 206  Q
    |||||||||||| || |||| ||||| ||||||||||||||||||||    
T  27517852 cttatgacatgtccataagcagttttcagcttatttccataaactct 27517898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 28340427 - 28340497
Alignment:
Q  195 tccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||| |||||||| ||||||  | ||||||  ||||| |||||||||||| ||||| |||||||||||    
T  28340427 tccataagctctccagcatagcttctgaaaacaacttataacttacatgaaaacagtttgactttatttta 28340497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 36538018 - 36537951
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagctt 191  Q
    |||| ||||| ||||||||||| |||||||||||||    ||||||||||||||| |||  |||||||||||    
T  36538018 acttgtgagattgtttgagagaacttatggaaacaa----cttatgacatgttcataagttgtttttagctt 36537951  T

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Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 39506008 - 39505963
Alignment:
Q  182 tttttagcttatttccataaactctccaggatagctaataaaaaca 227  Q
    |||| |||||||||||||||||||||||| |||||| || ||||||    
T  39506008 ttttcagcttatttccataaactctccagaatagcttatgaaaaca 39505963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 3968783 - 3968827
Alignment:
Q  190 ttatttccataaactctccaggatagctaataaaaacagattata 234  Q
    |||||||||||||||||||||||||||| || |||| || |||||    
T  3968783 ttatttccataaactctccaggatagcttatgaaaatagcttata 3968827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 157
Target Start/End: Complemental strand, 17944894 - 17944862
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaac 157  Q
    |||||||||||||||||| ||||||||||||||    
T  17944894 tgagactgtttgagagagtttatggaaacaaac 17944862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 18749807 - 18749887
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattata 234  Q
    ||||| |||| |||||||||| |||| ||||| |||||||||||||||  | |||  ||||||| || ||||||| |||||    
T  18749807 aaacagcttacgacatgttcataagcagttttcagcttatttccataagttttccgtgatagcttatgaaaacagcttata 18749887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 274
Target Start/End: Complemental strand, 22759230 - 22759146
Alignment:
Q  190 ttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||||||||||| |||||| |||||||| || ||| ||| || ||||||| ||||||| | |||  ||||||||||  |||||||    
T  22759230 ttatttccataagctctcctggatagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatcttttgtt 22759146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 46825151 - 46825067
Alignment:
Q  182 tttttagcttatttc-cataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||||||||||| ||||| | ||||| ||||||| || ||||| | |||| ||||| ||||||| | ||| |||||||||||    
T  46825151 tttttagcttatttctcataagcactccaagatagcttatgaaaacggtttatggcttatatgaaaacaatttgactttatttta 46825067  T

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Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 12477283 - 12477388
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    |||||||||||| || |||  ||||| |||||||||||||| |||||||| ||||||| || |||| ||  |||| |||||||||||| ||||| |||||    
T  12477283 cttatgacatgtccataagttgttttcagcttatttccatacactctccatgatagcttattaaaaaagcatatatcttacatgaaaacagtttgacttt 12477382  T
Q  260 atttta 265  Q
    ||||||    
T  12477383 atttta 12477388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 274
Target Start/End: Complemental strand, 52286784 - 52286638
Alignment:
Q  125 tgagactgtttgagagagctt-atggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaa 223  Q
    ||||||||||||||||||||| | |||||||    |||| ||| |||| || ||||  ||||||||||||||||||||||||| || |||  || || ||    
T  52286784 tgagactgtttgagagagctttacggaaaca----tcttctgatatgtccataagctatttttagcttatttccataaactcttcaagatgacttatgaa 52286689  T
Q  224 aacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    || || |||||||||| |||||||| |||| |||||||||||  |||||||    
T  52286688 aatagtttatagcttatatgaaaattgtttaactttattttatcttttgtt 52286638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 253
Target Start/End: Complemental strand, 4622172 - 4622074
Alignment:
Q  155 aacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||||||||||||||| || |||| ||||||||||||||| || || ||||||| ||||||  ||  |||||| |||||||||| ||||||| |||||    
T  4622172 aacatcttatgacatgtccataagctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttatatgaaaagagttt 4622074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 30257756 - 30257652
Alignment:
Q  161 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttta 260  Q
    |||||||||||||| |||| ||||| |||||||||| |||| | ||||||||||| | || ||||||  ||| |||||| ||| ||| ||||| ||||||    
T  30257756 ttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgacttta 30257657  T
Q  261 tttta 265  Q
    |||||    
T  30257656 tttta 30257652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 265
Target Start/End: Complemental strand, 10439791 - 10439655
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 224  Q
    ||||||| |||| ||||||||||| ||||||||    |||||||||| || || | | ||| ||||||||||||||||||||||||||||| |  | ||     
T  10439791 tgagactatttgggagagcttatgaaaacaaac----tatgacatgtccataatctgctttcagcttatttccataaactctccaggatagtttttgaat 10439696  T
Q  225 acagattatagcttacatgaaaatagtttcactttatttta 265  Q
    | || | |||||||| ||||||||| ||| |||| ||||||    
T  10439695 atagctgatagcttatatgaaaataatttgacttcatttta 10439655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 247
Target Start/End: Complemental strand, 15579585 - 15579469
Alignment:
Q  127 agactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac 226  Q
    |||||||||| |||||||| |||||||||    |||||||||||| || |||  ||| | |||||||||||||||||||  || ||||||| |  | |||    
T  15579585 agactgtttgggagagcttgtggaaacaa----cttatgacatgtccataagttgttctcagcttatttccataaactcaacatgatagcttacgagaac 15579490  T
Q  227 agattatagcttacatgaaaa 247  Q
    || ||||||||||||||||||    
T  15579489 agcttatagcttacatgaaaa 15579469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 35925770 - 35925707
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 217  Q
    ||||| ||||||||||||||| |||| ||||| | ||||||||||||||||||||| |||||||    
T  35925770 aaacagcttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagct 35925707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 17269324 - 17269210
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    |||||||||||||||  ||  ||||||| |||||| || ||| ||||||||||||||| || ||||||  |||| ||||| ||||||| | ||| |||||    
T  17269324 cttatgacatgttcatgagttgtttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgacttt 17269225  T
Q  260 attttaaattttgtt 274  Q
    ||||| | |||||||    
T  17269224 attttcacttttgtt 17269210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 27738200 - 27738290
Alignment:
Q  184 tttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||||||||| ||||||| |||||| | |||||| || |||||| ||||||||||| ||||||| | ||| |||||||||||  |||||||    
T  27738200 tttagcttatatccataagctctcctgtatagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatcttttgtt 27738290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 44422746 - 44422680
Alignment:
Q  187 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||||||| ||||| ||||||||||||||| ||||||| || |||||||||| ||||||| |||||    
T  44422746 agcttattttcataagctctccaggatagcttataaaaatagcttatagcttatatgaaaacagttt 44422680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 4699605 - 4699666
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatag 215  Q
    ||||| ||||||||||||||| |||| |||||||||||||||| |||| |||||| ||||||    
T  4699605 aaacaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatag 4699666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 7218070 - 7218175
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    ||||||||| ||||| |||| ||||| | ||||||| |||||  |||||||||||| | || ||||||  |||||||||| ||||||| | ||| |||||    
T  7218070 cttatgacacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgacttt 7218169  T
Q  260 atttta 265  Q
    ||||||    
T  7218170 atttta 7218175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 274
Target Start/End: Original strand, 31517700 - 31517850
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||| |||||||||||| |||| |||||  ||||||    || |||||||||||| |||| ||||| ||||||||| ||||| ||||||| || || | |    
T  31517700 acttgtgagactgtttgggagaacttatcaaaacaa----ctcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagatta 31517795  T
Q  220 taaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    | || |||| |||||||||| ||||||  | ||| |||||||||||  |||||||    
T  31517796 tgaagacagcttatagcttatatgaaatcaatttaactttattttatcttttgtt 31517850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 15361766 - 15361682
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||| |||||| |||||||||||||| || ||| || || ||||||| |||||||||| ||||||||| ||| |||||| ||||    
T  15361766 gttttcagcttaattccataaactctcaagaatatcttatgaaaacagcttatagcttatatgaaaataatttgactttacttta 15361682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 27140558 - 27140478
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattata 234  Q
    ||||| |||||||||||| || |||  ||||| ||||||||| ||||| ||||||| ||||||| |||||||||| |||||    
T  27140558 aaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 28482223 - 28482315
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaa 246  Q
    ||||||||||||| || |||| || |  |||||||||||||| | ||| ||||||| |||| || |||||||||| |||||||||| ||||||    
T  28482223 aaacatcttatgatatattcataaactatttttagcttattttcgtaagctctccaagataacttataaaaacagcttatagcttatatgaaa 28482315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 274
Target Start/End: Original strand, 35080060 - 35080180
Alignment:
Q  155 aacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaat-aaaaacagattatagcttacatgaaaatagttt 253  Q
    |||| ||||||||||||||| |||| ||||| |||||||||| | || ||||||| ||||||| || ||||| || |||  ||||| ||| ||| |||||    
T  35080060 aacaacttatgacatgttcataagctgttttgagcttatttcgacaagctctccatgatagctcatgaaaaaaagcttagcgcttatatggaaacagttt 35080159  T
Q  254 cactttattttaaattttgtt 274  Q
     |||||||||||  |||||||    
T  35080160 gactttattttattttttgtt 35080180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 45205121 - 45205037
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||| ||||||||||||| |||||| || ||||||| || ||||||  || ||||||| ||| ||||||||| |||||||||||    
T  45205121 gttttcagcttatttccatgaactctacatgatagcttatgaaaacaacttctagcttatatggaaatagtttgactttatttta 45205037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 6977035 - 6976952
Alignment:
Q  119 aacttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctc 207  Q
    ||||| |||| ||||||| ||||||| ||||||||||    ||||||||||||||| |||| ||||| | |||||||||||||||||||    
T  6977035 aacttgtgaggctgtttgcgagagctaatggaaacaa----cttatgacatgttcataagctgttttaa-cttatttccataaactctc 6976952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 48830098 - 48830177
Alignment:
Q  186 tagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||||||| || | ||||  || |||||| || ||||||| |||||||||| ||||||||||||| |||||||||||    
T  48830098 tagcttatttctattagctctttagaatagcttatgaaaacagtttatagcttatatgaaaatagtttgactttatttta 48830177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 4700083 - 4700141
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||| ||||||||| ||||| ||||||||||||| | |||||||||| ||||||||||    
T  4700083 gttttcagcttattttcataagctctccaggatagtttataaaaacagtttatagctta 4700141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 5150982 - 5150900
Alignment:
Q  189 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaatttt 271  Q
    |||||||| |||| |||| || ||||||| || |||||| |||| | |||| ||||||||||||| ||||||||||| |||||    
T  5150982 cttatttctataagctcttcatgatagcttatgaaaacaaattacaacttaaatgaaaatagtttgactttattttatatttt 5150900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 265
Target Start/End: Complemental strand, 9656713 - 9656619
Alignment:
Q  171 ttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||| |||| ||||| ||||||||| |||||    |||||||||||| || || |||| |||||||||| ||||||||| ||| |||||||||||    
T  9656713 ttcataagctgttttgagcttattttcataattcatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttatttta 9656619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 10199404 - 10199509
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    ||||||||||||||| |||  ||||| ||||||||| ||||| ||||| |  |||||| || |||| || |||| | ||| | ||||||||||| |||||    
T  10199404 cttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaaatagtttgacttt 10199503  T
Q  260 atttta 265  Q
    ||||||    
T  10199504 atttta 10199509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 14629964 - 14630041
Alignment:
Q  162 tatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||| ||||||| |||  ||||| |||||||||||||||| |||||| ||||||| || |||| || ||||||||||    
T  14629964 tatgatatgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatagctta 14630041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 265
Target Start/End: Complemental strand, 26184828 - 26184720
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||||||||||| || |||| ||||| || |||||||||||| ||||||||||||  | || || |||||||||  ||   ||||||||| |||    
T  26184828 aaacagcttatgacatgtccataagctgttttcagattatttccataagctctccaggataatttatgaatacagattatgact---atgaaaataattt 26184732  T
Q  254 cactttatttta 265  Q
     |||||||||||    
T  26184731 gactttatttta 26184720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 34179889 - 34179982
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||| ||| |||||||||||||| | |||||||| | || ||||||| |||||||||| || |||| | ||| |||||||||||  |||||||    
T  34179889 gttttcagcgtatttccataaacttttcaggatagtttatgaaaacagtttatagcttagattaaaacaatttgactttattttatcttttgtt 34179982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 16322902 - 16322818
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||||||||||||||||||| |||| ||  |||||  || ||||||| ||||| |||  ||||||||||||| ||| |||||||    
T  16322902 gtttttagcttatttccataagctcttcaaaatagcctatgaaaacagcttataacttctatgaaaatagtttgactatatttta 16322818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 3924670 - 3924631
Alignment:
Q  188 gcttatttccataaactctccaggatagctaataaaaaca 227  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  3924670 gcttatttccataaactcttcaggatagcttataaaaaca 3924631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 6292573 - 6292518
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctcca 209  Q
    ||||| ||||||||||||||| |||| ||||| ||||||||| ||||| |||||||    
T  6292573 aaacagcttatgacatgttcataagctgttttcagcttattttcataagctctcca 6292518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 273
Target Start/End: Original strand, 7262508 - 7262627
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||| ||||||||||| |||| ||||| | |||||||||| || |||| |||||||||| || |||| |  |||||  | | ||||||| |||||    
T  7262508 aaacagcttttgacatgttcataagctgttttcaccttatttccacaagctcttcaggatagcttatgaaaagaacttatacttaaaatgaaaacagttt 7262607  T
Q  254 cactttattttaaattttgt 273  Q
     |||||||| || |||||||    
T  7262608 aactttattatacattttgt 7262627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 24146297 - 24146332
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagc 216  Q
    ||||||||||||||||||||||||||| ||||||||    
T  24146297 gtttttagcttatttccataaactctcaaggatagc 24146332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 30259511 - 30259597
Alignment:
Q  189 cttatttccataaactctccaggatagcta-ataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||||||||||| ||||||| |||||||  ||  |||||| |||||||||| || |||  ||||| ||||||||||| ||||||||    
T  30259511 cttatttccataagctctccatgatagctttatgcaaacagcttatagcttatatcaaagcagtttgactttattttatattttgtt 30259597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 4482031 - 4481969
Alignment:
Q  129 actgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttattt 195  Q
    ||||||||||||| |||||| ||||||    ||||| ||||||||| |||| |||||||||||||||    
T  4482031 actgtttgagagaacttatgaaaacaa----cttattacatgttcataagctgtttttagcttattt 4481969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 11211171 - 11211078
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||||| |||||||||||||||||||||  | |||| || |||| || || || |||| ||||||| | ||| |||||||||||  |||||||    
T  11211171 gtttttaacttatttccataaactctccataacagcttatgaaaatagtttttatcttatatgaaaaaaatttaactttattttatcttttgtt 11211078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 11639406 - 11639459
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctc 207  Q
    ||||| |||||||||||| || |||| ||||||||||||||| ||||| |||||    
T  11639406 aaacagcttatgacatgtccataagctgtttttagcttattttcataagctctc 11639459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 15438059 - 15437981
Alignment:
Q  134 ttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagc 216  Q
    ||||||||| ||||||||||||    ||||||||||||||| |||    ||| ||||||||||| ||||||||| ||||||||    
T  15438059 ttgagagaggttatggaaacaa----cttatgacatgttcataagttactttcagcttatttccgtaaactctcgaggatagc 15437981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 17009550 - 17009591
Alignment:
Q  128 gactgtttgagagagcttatggaaacaaacatcttatgacat 169  Q
    ||||||||| ||||||||||||||||||||| |||| |||||    
T  17009550 gactgtttgggagagcttatggaaacaaacaacttaggacat 17009591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 263
Target Start/End: Complemental strand, 26630507 - 26630434
Alignment:
Q  190 ttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattt 263  Q
    |||||||||||   |||||||||||||  || ||||||| |||||||||| ||||||| | ||| |||||||||    
T  26630507 ttatttccatatgttctccaggatagcgtatcaaaacagtttatagcttatatgaaaacaattttactttattt 26630434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 37842345 - 37842430
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    |||||||| |||||||||||| |||| ||||| |||||||||  ||||  ||| || ||||||| || ||||||  ||||||||||    
T  37842345 aaacatctaatgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagctta 37842430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 15566661 - 15566737
Alignment:
Q  189 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||| |||||||||| |||| ||||||| || |||| |||||||| |||| | || || ||||| |||||||||||    
T  15566661 cttatatccataaactttccatgatagcttatgaaaatagattataacttaaaggagaacagtttgactttatttta 15566737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 15581364 - 15581223
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||| ||||| ||||||  |||||| ||||||||||    ||||||||||||  | |||| ||||| ||| |||||| |||| | ||| || ||| || |    
T  15581364 acttgtgagattgtttggaagagctaatggaaacaa----cttatgacatgtctataagctgttttcagcctatttctataagccctctagcatacctta 15581269  T
Q  220 taaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||||| || |||||||||| || ||||||  || |||||||||||    
T  15581268 taaaaaaagcttatagcttatataaaaatatattaactttatttta 15581223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 17628689 - 17628568
Alignment:
Q  140 gagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||||||||||||||    |||||||||||| || |||| ||||| ||| |||||||| ||   |||||  |||| |||||||||||| |||||  |||    
T  17628689 gagcttatggaaacaa----cttatgacatgtccataagctgttttcagcatatttccaaaagacctccaaaatagttaataaaaacagcttataattta 17628594  T
Q  240 catgaaaatagtttcactttatttta 265  Q
     ||||||| | ||| |||||| ||||    
T  17628593 tatgaaaacaatttgactttacttta 17628568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 245
Target Start/End: Complemental strand, 25479654 - 25479570
Alignment:
Q  161 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaa 245  Q
    ||||||||||||||  ||  ||||| ||||||||| ||||| ||||| ||||||||| || ||||||  ||||||| || |||||    
T  25479654 ttatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaa 25479570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 264
Target Start/End: Original strand, 27887114 - 27887218
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    |||||||||||| || ||   |||||||||||||||  |||  ||||||| ||||| | || ||||||  |||||||||| ||| |||| |||| |||||    
T  27887114 cttatgacatgtccataaattgtttttagcttatttttatatgctctccatgatagtttatgaaaacaacttatagcttatatggaaattgtttgacttt 27887213  T
Q  260 atttt 264  Q
    |||||    
T  27887214 atttt 27887218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 28689442 - 28689537
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaata--aaaacagattatagcttacatgaaaa 247  Q
    ||||| |||||||||||| || |||  ||||| ||||||||| ||||| || |||| ||||||| |||  ||||||  |||||||||| |||||||    
T  28689442 aaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaa 28689537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 28935873 - 28935929
Alignment:
Q  161 ttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagct 217  Q
    ||||||||||| || |||   |||||||||||||||||||| |||| ||||||||||    
T  28935873 ttatgacatgtccataagttttttttagcttatttccataagctcttcaggatagct 28935929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 274
Target Start/End: Complemental strand, 14295611 - 14295466
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 224  Q
    ||||||||| |||||||||||||| |||||     ||||||| ||||  | |||| ||||| |||||| ||| | || ||||||||||||||| |  |||    
T  14295611 tgagactgtctgagagagcttatgaaaacag----cttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaa 14295516  T
Q  225 acagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||| |||||||||| ||||||| ||||| |||||||||||  |||||||    
T  14295515 acagcttatagcttatatgaaaacagtttgactttattttatcttttgtt 14295466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 2468537 - 2468440
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 224  Q
    |||||||||||  |||| |||||||||||||   | ||||||||||| || |||| ||||| |||||| ||||||||||||| |||||||||| ||||||    
T  2468537 tgagactgttttggagaacttatggaaacaa---ttttatgacatgtccataagctgttttgagcttacttccataaactcttcaggatagcttataaaa 2468441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 37611175 - 37611278
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||| ||||| |||||||||||||||||| ||||||    ||| ||||||||||| |||| ||||| || |||||||||||| ||||||| ||||||| |    
T  37611175 acttgtgagattgtttgagagagcttatgaaaacaa----cttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagctta 37611270  T
Q  220 taaaaaca 227  Q
    | ||||||    
T  37611271 tgaaaaca 37611278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 37787905 - 37788008
Alignment:
Q  120 acttatgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaa 219  Q
    |||| ||||| |||||||||||||||||| ||||||    ||| ||||||||||| |||| ||||| || |||||||||||| ||||||| ||||||| |    
T  37787905 acttgtgagattgtttgagagagcttatgaaaacaa----cttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagctta 37788000  T
Q  220 taaaaaca 227  Q
    | ||||||    
T  37788001 tgaaaaca 37788008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 263
Target Start/End: Complemental strand, 17368756 - 17368647
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| ||||||||||||||| | || ||||| ||||||||||||||| ||||||| ||||||| || ||||||  |||||| |||||  |||| |||||    
T  17368756 aaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatagattacacaaaaacagttt 17368657  T
Q  254 cactttattt 263  Q
     |||| ||||    
T  17368656 gacttcattt 17368647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 247
Target Start/End: Original strand, 37526164 - 37526282
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 224  Q
    |||||||||||||||||||||||| | |||| |    ||||||||||| | |||| ||||| ||||||||||||||| |||||||| | | || || |||    
T  37526164 tgagactgtttgagagagcttatgaatacaacc----tatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaa 37526259  T
Q  225 acagattatagcttacatgaaaa 247  Q
    |||  |||||||||| |||||||    
T  37526260 acaacttatagcttatatgaaaa 37526282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 247
Target Start/End: Original strand, 37588325 - 37588443
Alignment:
Q  125 tgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaa 224  Q
    |||||||||||||||||||||||| | |||| |    ||||| ||||| | |||| ||||| ||||||||||||||| |||||||| ||| || || |||    
T  37588325 tgagactgtttgagagagcttatgaatacaacc----tatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaa 37588420  T
Q  225 acagattatagcttacatgaaaa 247  Q
    |||  |||||||||| |||||||    
T  37588421 acaacttatagcttatatgaaaa 37588443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 264
Target Start/End: Original strand, 17258879 - 17258983
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcacttt 259  Q
    ||||||||||||||| |||| ||||| ||||||||| ||||| |||| |||||||| | || ||||||| |||| | ||  | ||||||||||| |||||    
T  17258879 cttatgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaaacagcttattgattgtacgaaaatagtttgacttt 17258978  T
Q  260 atttt 264  Q
    |||||    
T  17258979 atttt 17258983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 36542272 - 36542371
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    |||||||||||||||||| || |||| ||||||| |||||||||| || ||||| ||||||||| ||  || ||| |||||||||| |||| || |||||    
T  36542272 aaacatcttatgacatgtccagaagctgtttttaacttatttccacaagctctctaggatagcttatggaatcagcttatagcttatatgagaacagttt 36542371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 32172751 - 32172648
Alignment:
Q  132 gtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagatt 231  Q
    ||||| ||||||||||||||||||    |||||||||||| || ||||| |||| ||||||||||||| |  ||| || ||||||| || ||||||| ||    
T  32172751 gtttgggagagcttatggaaacaa----cttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatgaaaacagctt 32172656  T
Q  232 atagctta 239  Q
    ||||||||    
T  32172655 atagctta 32172648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 39105545 - 39105459
Alignment:
Q  154 aaacatcttatgacat-gttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||| |||||||||| ||||| ||||  |||||||||||||| |||||  |||||| ||||||| || ||||||||||||||||||    
T  39105545 aaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagctta 39105459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 274
Target Start/End: Original strand, 28586735 - 28586876
Alignment:
Q  129 actgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 228  Q
    |||||||| ||||||||||||||| |     |||||||||| | |  |||| ||||| |||||||||| |||| ||||| |||||||||  | |||||||    
T  28586735 actgtttgggagagcttatggaaatag----cttatgacatatccgtaagctgttttcagcttatttcgataagctctctaggatagctcgtcaaaacag 28586830  T
Q  229 attatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
     |||||  ||| ||||||| ||||| |||||||||||  |||||||    
T  28586831 cttataatttatatgaaaacagtttgactttattttatcttttgtt 28586876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 29844970 - 29845018
Alignment:
Q  187 agcttatttccataaactctccaggatagctaataaaaacagattatag 235  Q
    ||||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  29844970 agcttatttccataagctctccagggtagctaataaaaacagcttatag 29845018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 36774703 - 36774771
Alignment:
Q  160 cttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 228  Q
    |||||||||||| | ||||  | ||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  36774703 cttatgacatgtcctaaagatggtttcagcttatttccataagctctccaggatagcttataaaaacag 36774771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 3951651 - 3951580
Alignment:
Q  198 ataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaatt 269  Q
    |||| ||||||||||||||| |||||||||| |||||||| | ||||||||| ||| | || ||||||||||    
T  3951651 ataatctctccaggatagcttataaaaacagcttatagctaatatgaaaataatttgatttcattttaaatt 3951580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 264
Target Start/End: Original strand, 41957441 - 41957551
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagttt 253  Q
    ||||| |||||||||||| || |||  ||||| | ||||||| |||||  |||| ||||||||| || ||||||| ||||| |||||||||||| | |||    
T  41957441 aaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaattt 41957540  T
Q  254 cactttatttt 264  Q
     |||| |||||    
T  41957541 aacttcatttt 41957551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 32408616 - 32408677
Alignment:
Q  188 gcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaata 249  Q
    |||||||||||||| |||| |||||||||| || |||| || |||||||||| |||||||||    
T  32408616 gcttatttccataagctcttcaggatagcttatgaaaatagtttatagcttatatgaaaata 32408677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 265
Target Start/End: Complemental strand, 35960516 - 35960383
Alignment:
Q  127 agactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaac 226  Q
    ||||| ||||||||||||||||||| |||    |||| ||||||| || |||  ||||||||||||||||  ||  || |||||||||||| || ||| |    
T  35960516 agactatttgagagagcttatggaagcaa----cttacgacatgtccataagatgtttttagcttatttctttacgctttccaggatagcttatgaaatc 35960421  T
Q  227 agattatagcttacatgaaaatagtttcactttatttta 265  Q
    |  |||||| ||| ||| ||||||||| |||||||||||    
T  35960420 aacttatagtttatatg-aaatagtttgactttatttta 35960383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 6183497 - 6183429
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaata 249  Q
    ||||| ||||||||||||||| |||||||  | |||| || || |||| ||||||||||||||||||||    
T  6183497 gttttcagcttatttccataagctctccaaaacagcttatgaatacagcttatagcttacatgaaaata 6183429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 26516445 - 26516369
Alignment:
Q  189 cttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||||||||||||| ||| |  ||||||| || ||||||| ||||| |||| |||||| |||||| |||||||||||    
T  26516445 cttatttccataaaatctgctagatagcttatgaaaacagtttataacttatatgaaagtagtttgactttatttta 26516369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 28413274 - 28413334
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggata 214  Q
    ||||| ||||||  ||||||| |||| ||||| ||||||||||||||||||||||| ||||    
T  28413274 aaacagcttatggaatgttcataagctgttttcagcttatttccataaactctccaagata 28413334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 280
Target Start/End: Complemental strand, 16889788 - 16889689
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgttttggaa 280  Q
    ||||| || |||||||||||||||||| || |||||| || ||||||| |||||||||  || |||| ||||| |||| | ||||  ||||||| |||||    
T  16889788 gttttcagattatttccataaactctctagcatagcttatgaaaacagcttatagcttctataaaaacagtttgacttaagtttatcttttgttatggaa 16889689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 29201583 - 29201528
Alignment:
Q  184 tttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||||| |||||||||| ||||||||||||| | || ||||||| ||||||||||    
T  29201583 tttagctaatttccataagctctccaggataggttatgaaaacagcttatagctta 29201528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 30217126 - 30217051
Alignment:
Q  190 ttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    |||||||||||| ||||||||||||||| || ||| ||| |||||| |||| ||||| || ||  |||||||||||    
T  30217126 ttatttccataagctctccaggatagcttatgaaagcagcttatagattacgtgaaattaattagactttatttta 30217051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 35095750 - 35095850
Alignment:
Q  124 atgagactgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaa 223  Q
    |||||||||||||  |||||||||||||| |    ||||||||||||| || | |||||||| | ||||||||||||| || | || ||||||| || ||    
T  35095750 atgagactgtttggaagagcttatggaaata----tcttatgacatgtacatatgccgttttcaacttatttccataagctttacaagatagctcatgaa 35095845  T
Q  224 aacag 228  Q
    |||||    
T  35095846 aacag 35095850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 38047886 - 38047965
Alignment:
Q  195 tccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||||| ||||||||||||||| || |||||||  |||||  || ||||||||| ||| |||||||||||  |||||||    
T  38047886 tccataagctctccaggatagcttatgaaaacagcatatagtatatatgaaaataatttgactttattttatcttttgtt 38047965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 499721 - 499775
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctcc 208  Q
    ||||| ||||||||||||| | |||  ||||| ||||||||||||||||||||||    
T  499721 aaacagcttatgacatgttaacaagttgttttcagcttatttccataaactctcc 499775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 18853064 - 18853006
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||||||||||||||||||| || ||| ||||||| ||| ||||||  ||||||||||    
T  18853064 gtttttagcttatttccataagctatcctggatagccaattaaaacatcttatagctta 18853006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 35551006 - 35550909
Alignment:
Q  176 aagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||||| |||| |||||| ||||| |  |||||||||||| | |||||||||| |||||| ||| |||||||||  || |||||||||||  |||||||    
T  35551006 aagccgattttggcttatctccattagttctccaggataggttataaaaacagcttatagtttatatgaaaata-attgactttattttatcttttgtt 35550909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 36638819 - 36638753
Alignment:
Q  162 tatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 228  Q
    ||||||||||||| ||||  |||| ||||||||||||||| ||||| |||||| || || |||||||    
T  36638819 tatgacatgttcataagcttttttcagcttatttccataagctctctaggataacttatgaaaacag 36638753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 39941850 - 39941804
Alignment:
Q  225 acagattatagcttacatgaaaatagtttcactttattttaaatttt 271  Q
    |||| ||||||||||  |||||||||||| |||||||||||||||||    
T  39941850 acagcttatagcttaattgaaaatagtttgactttattttaaatttt 39941804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 2568738 - 2568653
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||| |||||||||| |||| |||   |||||||||||||| ||| | ||||||| ||||||| || ||||||  ||||||||||    
T  2568738 aaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagctta 2568653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 2880537 - 2880610
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 227  Q
    ||||| || |||| ||||||| |||  ||||| |||||||||||||||||||| | | |||||| |||||||||    
T  2880537 aaacagctaatgatatgttcataaggtgttttcagcttatttccataaactcttctgaatagcttataaaaaca 2880610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 4619808 - 4619706
Alignment:
Q  129 actgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacag 228  Q
    |||||||| ||||||||||| ||||||    || |||||||||||| |||| | ||| | |||||||||||||  |||||| ||||||| || || ||||    
T  4619808 actgtttgggagagcttatgaaaacaa----ctaatgacatgttcataagctggtttcaccttatttccataagttctccatgatagcttatgaagacag 4619713  T
Q  229 attatag 235  Q
     ||||||    
T  4619712 tttatag 4619706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 38766900 - 38766953
Alignment:
Q  221 aaaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||| |||||||| |||| ||||||||||||| |||||||||||  |||||||    
T  38766900 aaaaatagattataacttagatgaaaatagtttaactttattttagcttttgtt 38766953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 39941735 - 39941694
Alignment:
Q  230 ttatagcttacatgaaaatagtttcactttattttaaatttt 271  Q
    ||||||||||  |||||||||||| |||||||||||||||||    
T  39941735 ttatagcttaattgaaaatagtttgactttattttaaatttt 39941694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 40205064 - 40205137
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaaca 227  Q
    ||||| ||||| |||||| || || | ||||| |||||||||| |||| ||||||||||||||| || ||||||    
T  40205064 aaacagcttataacatgtccataatctgttttcagcttatttctataagctctccaggatagcttatgaaaaca 40205137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 1899234 - 1899178
Alignment:
Q  154 aaacatcttatgacatgttcaaaagccgtttttagcttatttccataaactctccag 210  Q
    ||||| |||||||||||| || |||  ||||| |||||||||||||||| |||||||    
T  1899234 aaacagcttatgacatgtgcataagttgttttcagcttatttccataaattctccag 1899178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 9202737 - 9202849
Alignment:
Q  154 aaacatcttatgacat-gttcaaaagccgtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtt 252  Q
    ||||| |||||||||| ||||| |||| ||||  ||||||||| |||||  ||| || |||| || || ||||||| |||| ||||| ||||||| | ||    
T  9202737 aaacagcttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatt 9202836  T
Q  253 tcactttatttta 265  Q
    | |||||||||||    
T  9202837 taactttatttta 9202849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 10272448 - 10272532
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatttta 265  Q
    ||||| ||||||||| ||||||||||||| ||| ||| || ||||||  |||||||||| | ||||| | ||| |||| ||||||    
T  10272448 gttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatttgacttaatttta 10272532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 10391375 - 10391331
Alignment:
Q  200 aaactctccaggatagctaataaaaacagattatagcttacatga 244  Q
    |||||||| ||||||||| ||||||||| ||||||||||| ||||    
T  10391375 aaactctctaggatagcttataaaaacaaattatagcttatatga 10391331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 35135728 - 35135772
Alignment:
Q  230 ttatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    |||||||||| ||||||||||||| |||||||||||  |||||||    
T  35135728 ttatagcttatatgaaaatagtttgactttattttatcttttgtt 35135772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 35553211 - 35553271
Alignment:
Q  187 agcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaa 247  Q
    ||||||||||||||| |||||||| |||||  || |||| || |||||||||| |||||||    
T  35553211 agcttatttccataagctctccagaatagcgtatgaaaatagtttatagcttatatgaaaa 35553271  T

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Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 39750155 - 39750103
Alignment:
Q  222 aaaacagattatagcttacatgaaaatagtttcactttattttaaattttgtt 274  Q
    ||||||| ||||| |||| ||||||||||||| |||||||||||  |||||||    
T  39750155 aaaacaggttataacttatatgaaaatagtttgactttattttatcttttgtt 39750103  T

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Target: scaffold0608 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 9606 - 9668
Alignment:
Q  129 actgtttgagagagcttatggaaacaaacatcttatgacatgttcaaaagccgtttttagcttattt 195  Q
    ||||||||||||| |||||| ||||||    ||||| ||||||||| |||| |||||||||||||||    
T  9606 actgtttgagagaacttatgaaaacaa----cttattacatgttcataagctgtttttagcttattt 9668  T

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Target: scaffold0584 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0584
Description:

Target: scaffold0584; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 1350 - 1430
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatt 262  Q
    ||||||| ||||||| ||||| || ||||||||||||| | |||| || |||||||||| |||||| |||||| | ||||||    
T  1350 gtttttatcttattttcataagct-tccaggatagctagttaaaatagcttatagcttatatgaaagtagtttaagtttatt 1430  T

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Target: scaffold0446 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 5476 - 5556
Alignment:
Q  181 gtttttagcttatttccataaactctccaggatagctaataaaaacagattatagcttacatgaaaatagtttcactttatt 262  Q
    ||||||| ||||||| ||||| || ||||||||||||| | |||| || |||||||||| |||||| |||||| | ||||||    
T  5476 gtttttatcttattttcataagct-tccaggatagctagttaaaatagcttatagcttatatgaaagtagtttaagtttatt 5556  T

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Target: scaffold0091 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 7003 - 6947
Alignment:
Q  183 ttttagcttatttccataaactctccaggatagctaataaaaacagattatagctta 239  Q
    ||||||||||||| ||||| |||| || ||||||| | |||||||| ||||||||||    
T  7003 ttttagcttattttcataagctcttcatgatagcttacaaaaacagcttatagctta 6947  T

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