View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8756_low_5 (Length: 487)

Name: NF8756_low_5
Description: NF8756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8756_low_5
NF8756_low_5
[»] chr2 (42 HSPs)
chr2 (19-487)||(12304498-12304967)
chr2 (286-487)||(12304129-12304329)
chr2 (20-225)||(12299609-12299820)
chr2 (445-487)||(31451010-31451052)
chr2 (444-487)||(16736100-16736143)
chr2 (443-486)||(17856534-17856577)
chr2 (444-487)||(31450665-31450708)
chr2 (445-487)||(4104159-4104201)
chr2 (445-487)||(4120764-4120806)
chr2 (445-487)||(41377698-41377740)
chr2 (446-487)||(12303786-12303827)
chr2 (446-487)||(38275801-38275842)
chr2 (443-487)||(32933589-32933633)
chr2 (443-487)||(39150169-39150213)
chr2 (443-487)||(39454449-39454493)
chr2 (448-487)||(4121107-4121146)
chr2 (444-487)||(5961668-5961711)
chr2 (444-487)||(16261214-16261257)
chr2 (448-487)||(18565347-18565386)
chr2 (444-487)||(25642612-25642655)
chr2 (445-484)||(27132857-27132896)
chr2 (444-487)||(27476711-27476754)
chr2 (444-487)||(28203204-28203247)
chr2 (445-487)||(4104503-4104545)
chr2 (445-487)||(20908855-20908897)
chr2 (445-487)||(28202860-28202902)
chr2 (445-487)||(32933935-32933977)
chr2 (446-487)||(16260872-16260913)
chr2 (443-487)||(39912971-39913016)
chr2 (443-484)||(45389129-45389170)
chr2 (443-487)||(13354521-13354565)
chr2 (443-487)||(14877481-14877525)
chr2 (443-487)||(16655950-16655994)
chr2 (443-487)||(18565064-18565108)
chr2 (443-487)||(21470293-21470337)
chr2 (443-487)||(27132509-27132553)
chr2 (443-487)||(36442131-36442175)
chr2 (447-487)||(37412595-37412635)
chr2 (447-487)||(37744451-37744491)
chr2 (447-487)||(43183585-43183625)
chr2 (443-487)||(43183927-43183971)
chr2 (443-487)||(44610860-44610904)
[»] chr4 (38 HSPs)
chr4 (375-434)||(9037950-9038009)
chr4 (444-487)||(29864175-29864218)
chr4 (445-487)||(21218191-21218233)
chr4 (444-487)||(21217846-21217889)
chr4 (444-487)||(46200483-46200526)
chr4 (444-487)||(54136090-54136133)
chr4 (445-487)||(18862785-18862827)
chr4 (445-487)||(40067692-40067734)
chr4 (445-487)||(44710403-44710445)
chr4 (445-486)||(10014465-10014506)
chr4 (445-486)||(10017815-10017856)
chr4 (445-486)||(10021606-10021647)
chr4 (445-486)||(24503939-24503980)
chr4 (443-487)||(9010503-9010547)
chr4 (443-487)||(10014807-10014851)
chr4 (443-487)||(10021948-10021992)
chr4 (443-487)||(32385155-32385199)
chr4 (443-487)||(38866396-38866440)
chr4 (443-487)||(52914950-52914994)
chr4 (448-487)||(2738883-2738922)
chr4 (444-487)||(44428512-44428555)
chr4 (448-487)||(46621271-46621310)
chr4 (444-487)||(48209947-48209990)
chr4 (445-487)||(1205721-1205763)
chr4 (445-487)||(32384653-32384695)
chr4 (449-487)||(33625868-33625906)
chr4 (445-487)||(33626208-33626250)
chr4 (449-487)||(33882293-33882331)
chr4 (445-487)||(34958832-34958874)
chr4 (445-487)||(45683117-45683159)
chr4 (445-487)||(46535523-46535565)
chr4 (446-487)||(11242808-11242849)
chr4 (446-487)||(28570765-28570806)
chr4 (449-486)||(46620931-46620968)
chr4 (443-487)||(25058831-25058875)
chr4 (447-487)||(29864519-29864559)
chr4 (443-487)||(43317223-43317267)
chr4 (445-485)||(46200831-46200871)
[»] chr5 (30 HSPs)
chr5 (443-487)||(12593454-12593498)
chr5 (445-487)||(10656438-10656480)
chr5 (443-487)||(7399075-7399119)
chr5 (443-487)||(16353498-16353542)
chr5 (443-487)||(19204942-19204986)
chr5 (443-487)||(35263492-35263536)
chr5 (448-487)||(19205287-19205326)
chr5 (444-487)||(29023936-29023979)
chr5 (446-487)||(8418528-8418569)
chr5 (443-487)||(12695030-12695074)
chr5 (443-487)||(18514286-18514330)
chr5 (443-487)||(21750808-21750852)
chr5 (443-487)||(33699273-33699317)
chr5 (443-487)||(36752245-36752289)
chr5 (443-487)||(38416141-38416185)
chr5 (443-487)||(40589398-40589442)
chr5 (443-487)||(40590001-40590045)
chr5 (444-487)||(10656093-10656136)
chr5 (448-487)||(25923121-25923160)
chr5 (445-484)||(40589054-40589093)
chr5 (445-484)||(40589657-40589696)
chr5 (445-487)||(334296-334338)
chr5 (444-486)||(3879357-3879399)
chr5 (449-487)||(15267584-15267622)
chr5 (444-486)||(35263839-35263881)
chr5 (445-487)||(42710694-42710736)
chr5 (449-486)||(39706396-39706433)
chr5 (443-487)||(5088472-5088516)
chr5 (443-487)||(19615420-19615464)
chr5 (446-486)||(40774339-40774379)
[»] scaffold0236 (1 HSPs)
scaffold0236 (444-487)||(11558-11601)
[»] chr8 (30 HSPs)
chr8 (444-487)||(11639379-11639422)
chr8 (443-487)||(24456996-24457040)
chr8 (444-487)||(24456733-24456776)
chr8 (443-486)||(30872781-30872824)
chr8 (445-487)||(119460-119502)
chr8 (445-487)||(40040162-40040204)
chr8 (444-486)||(44678316-44678358)
chr8 (446-487)||(39240031-39240072)
chr8 (443-487)||(6843493-6843537)
chr8 (443-487)||(35223772-35223816)
chr8 (443-487)||(35224111-35224155)
chr8 (447-487)||(37393821-37393861)
chr8 (447-486)||(119119-119158)
chr8 (444-487)||(3869293-3869336)
chr8 (443-486)||(18017788-18017831)
chr8 (448-486)||(16645893-16645931)
chr8 (448-486)||(36344306-36344344)
chr8 (443-480)||(21512411-21512448)
chr8 (445-486)||(31230958-31230999)
chr8 (443-487)||(758688-758732)
chr8 (447-487)||(3868946-3868986)
chr8 (443-487)||(5416810-5416854)
chr8 (447-487)||(5417157-5417197)
chr8 (443-487)||(7041968-7042012)
chr8 (443-479)||(11198557-11198593)
chr8 (443-483)||(11639050-11639090)
chr8 (447-483)||(26217449-26217485)
chr8 (443-487)||(28207097-28207141)
chr8 (443-487)||(30650188-30650232)
chr8 (443-487)||(37393475-37393519)
[»] chr6 (17 HSPs)
chr6 (444-486)||(33329205-33329247)
chr6 (446-487)||(6220400-6220441)
chr6 (443-487)||(3338475-3338519)
chr6 (444-487)||(14337246-14337288)
chr6 (444-487)||(3288929-3288972)
chr6 (444-487)||(11525109-11525152)
chr6 (448-487)||(24604878-24604917)
chr6 (448-487)||(31029527-31029566)
chr6 (444-487)||(33548201-33548244)
chr6 (444-487)||(35132600-35132643)
chr6 (445-487)||(9173901-9173943)
chr6 (445-487)||(14336902-14336944)
chr6 (444-486)||(25551346-25551388)
chr6 (448-486)||(33971931-33971969)
chr6 (445-481)||(1860835-1860871)
chr6 (443-487)||(2949294-2949338)
chr6 (443-487)||(19135790-19135834)
[»] chr3 (37 HSPs)
chr3 (445-487)||(43527023-43527065)
chr3 (443-487)||(4846940-4846984)
chr3 (443-487)||(12123088-12123132)
chr3 (443-487)||(15862519-15862563)
chr3 (443-487)||(31514206-31514250)
chr3 (443-487)||(41208744-41208788)
chr3 (447-487)||(51170725-51170765)
chr3 (444-487)||(45871696-45871739)
chr3 (445-487)||(8846420-8846462)
chr3 (445-487)||(44069123-44069165)
chr3 (445-487)||(54107669-54107711)
chr3 (445-486)||(8846076-8846117)
chr3 (446-487)||(45171411-45171452)
chr3 (443-487)||(9028189-9028233)
chr3 (443-487)||(14353044-14353088)
chr3 (443-487)||(34521264-34521308)
chr3 (443-487)||(41998158-41998202)
chr3 (444-487)||(7274652-7274695)
chr3 (444-487)||(26332318-26332361)
chr3 (444-487)||(28688334-28688377)
chr3 (448-487)||(34521601-34521640)
chr3 (448-487)||(35580293-35580332)
chr3 (448-487)||(40410715-40410754)
chr3 (444-487)||(41997818-41997861)
chr3 (444-487)||(44069467-44069510)
chr3 (444-486)||(7950274-7950316)
chr3 (445-487)||(27940272-27940314)
chr3 (445-487)||(31513863-31513905)
chr3 (445-487)||(51883859-51883901)
chr3 (444-486)||(54081629-54081671)
chr3 (450-487)||(35753408-35753445)
chr3 (444-473)||(43527282-43527311)
chr3 (443-487)||(12123423-12123467)
chr3 (443-487)||(26332667-26332710)
chr3 (447-487)||(40926354-40926394)
chr3 (443-487)||(41208399-41208443)
chr3 (443-487)||(43899418-43899462)
[»] scaffold0809 (1 HSPs)
scaffold0809 (443-487)||(4662-4706)
[»] chr7 (21 HSPs)
chr7 (443-487)||(23437150-23437194)
chr7 (443-487)||(35085737-35085781)
chr7 (444-487)||(10625428-10625471)
chr7 (444-487)||(31715965-31716008)
chr7 (443-486)||(32706730-32706773)
chr7 (444-487)||(47250890-47250933)
chr7 (444-486)||(47251241-47251283)
chr7 (443-487)||(5238449-5238493)
chr7 (447-487)||(8769626-8769666)
chr7 (443-487)||(10625104-10625148)
chr7 (443-487)||(23472591-23472635)
chr7 (444-487)||(473191-473234)
chr7 (443-486)||(8769280-8769323)
chr7 (445-484)||(23439512-23439551)
chr7 (445-484)||(23472903-23472942)
chr7 (444-487)||(35086084-35086127)
chr7 (443-486)||(43726587-43726630)
chr7 (445-487)||(18731019-18731061)
chr7 (445-487)||(44486276-44486318)
chr7 (443-487)||(9034659-9034703)
chr7 (443-487)||(31715631-31715675)
[»] chr1 (40 HSPs)
chr1 (443-487)||(9881550-9881594)
chr1 (443-487)||(14118528-14118572)
chr1 (443-487)||(16268033-16268077)
chr1 (443-487)||(23281354-23281398)
chr1 (443-487)||(25088014-25088058)
chr1 (447-487)||(31125938-31125978)
chr1 (443-487)||(33753223-33753267)
chr1 (443-487)||(34028719-34028763)
chr1 (443-487)||(34029065-34029109)
chr1 (443-487)||(45305753-45305797)
chr1 (443-486)||(28112719-28112762)
chr1 (444-487)||(34279585-34279628)
chr1 (445-487)||(51691874-51691916)
chr1 (446-487)||(50921061-50921102)
chr1 (447-487)||(11787742-11787782)
chr1 (443-487)||(19986466-19986510)
chr1 (443-487)||(21385280-21385324)
chr1 (443-487)||(32564293-32564337)
chr1 (447-487)||(35986234-35986274)
chr1 (443-487)||(36077269-36077313)
chr1 (443-486)||(18794038-18794081)
chr1 (444-487)||(28970418-28970461)
chr1 (448-487)||(30293356-30293395)
chr1 (448-487)||(32517855-32517894)
chr1 (444-487)||(46949755-46949798)
chr1 (448-487)||(49291327-49291366)
chr1 (444-487)||(50921435-50921478)
chr1 (443-485)||(10654028-10654070)
chr1 (445-487)||(14776079-14776121)
chr1 (447-484)||(11395007-11395044)
chr1 (446-487)||(16267716-16267757)
chr1 (446-487)||(30611565-30611606)
chr1 (447-487)||(21035987-21036027)
chr1 (443-487)||(24655930-24655974)
chr1 (443-487)||(30293011-30293055)
chr1 (444-480)||(32563958-32563994)
chr1 (445-485)||(34279240-34279280)
chr1 (443-487)||(37199265-37199309)
chr1 (451-487)||(50574861-50574897)
chr1 (447-487)||(51692214-51692254)
[»] scaffold0168 (2 HSPs)
scaffold0168 (445-487)||(11831-11873)
scaffold0168 (443-479)||(11486-11522)
[»] scaffold0051 (1 HSPs)
scaffold0051 (445-486)||(40697-40738)
[»] scaffold0444 (1 HSPs)
scaffold0444 (444-487)||(11638-11681)
[»] scaffold0128 (1 HSPs)
scaffold0128 (445-487)||(45180-45222)
[»] scaffold0016 (1 HSPs)
scaffold0016 (445-487)||(90805-90847)
[»] scaffold1436 (1 HSPs)
scaffold1436 (443-487)||(1474-1518)
[»] scaffold0012 (1 HSPs)
scaffold0012 (443-487)||(177409-177453)


Alignment Details
Target: chr2 (Bit Score: 344; Significance: 0; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 19 - 487
Target Start/End: Complemental strand, 12304967 - 12304498
Alignment:
Q  19 tttgtttcttcacctataaagaagttaataagagaagttgcccgccgccccttagattaactgcaatataatttaaataannnnnnnctattttgttatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||    
T  12304967 tttgttttttcacctataaagaagttaataagagaagttgcccgccgccccttagattaactgcaatataatttaaataatttttttctattttgttatt 12304868  T
Q  119 ggtctagtggccaacgcgccggtcgaataatcaaatttggaagggtgaaaaggatttgcgattgaatcgtgtatgtggcaattatttttatcaacaatgt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12304867 ggtctagtggccaacgcgccggtcgaataatcaaatttggaagggtgaaaaggatttgcgattgaatcgtgtatgtggcaattatttttatcaacaatgt 12304768  T
Q  219 tgtgatgtgtcaagtgtgataagcttcaaaccgggattctggaggagattatcactagaagtcggggtgagattagacgaatttgcctccgatctatttt 318  Q
    |||||||||| |||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  12304767 tgtgatgtgttaagtgtgataagtttcaaacaggaattctggaggagattatcactagaagtcggggtgaggttagacgaatttgcctgcgatctttttt 12304668  T
Q  319 attaaaaacaaaggtaaccannnnnnnnagtcatttttaaaagaaacattgatcaatgacaataaggttaactaataaaatataaaacagtaacgataaa 418  Q
    |||||||||||||||||||         |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12304667 attaaaaacaaaggtaacctttttttttagtcatttttaaaagaaaaattgatcaatgacaataaggttaactaataaaatataaaacagtaacgataaa 12304568  T
Q  419 atgagatatcaattatt-nnnnnnntaggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||        |||||||||||||||||||  ||||||||| ||||||||||||||    
T  12304567 atgagatatcaattattaaaaaaaataggctaaattgcattttttgtcccttaacaatttaggtagtatc 12304498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 286 - 487
Target Start/End: Complemental strand, 12304329 - 12304129
Alignment:
Q  286 tgagattagacgaatttgcctccgatctattttattaaaaacaaaggtaaccannnnnnnnagtcatttttaaaagaaacattgatcaatgacaataagg 385  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||||| ||||||||||||||||||||    
T  12304329 tgaggttagacgaatttgcctccgatcttttttattaaaaacaaaggtaaccattttttttagtcatttttaaaagaaaaattgatcaatgacaataagg 12304230  T
Q  386 ttaactaataaaatataaaacagtaacgataaaatgagatatcaattattnnnnnnntaggctaaattgcatttttcatcccttaactatttaggtagta 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        |||| || ||||||||||  ||||||||||||||||||||||    
T  12304229 ttaactaataaaatataaaacagtaacgataaaatgagatatcaattattaaaaaaa-aggcaaatttgcatttttggtcccttaactatttaggtagta 12304131  T
Q  486 tc 487  Q
    ||    
T  12304130 tc 12304129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 225
Target Start/End: Complemental strand, 12299820 - 12299609
Alignment:
Q  20 ttgtttcttcacctataaagaagttaataagagaagttgcccgccgccccttaga-------ttaactgcaatataatttaaataannnnnnnctatttt 112  Q
    |||||| |||||||||||||||||||| | ||||||| ||| ||||||||| |||       |||||||||||||||||||||||        |||||||    
T  12299820 ttgttttttcacctataaagaagttaacaggagaagtagccagccgcccctcagactaaccattaactgcaatataatttaaatagtttttttctatttt 12299721  T
Q  113 gttattggtctagtggccaacgcgccg-gtcgaataatcaaatttggaagggtgaaaaggatttgcgattgaatcgtgtatgtggcaattatttttatca 211  Q
    ||||||||||||||||||||||||| | |||| |||||||||||| |||| |||||||||| || | ||| |   || |||||||||||||||||||| |    
T  12299720 gttattggtctagtggccaacgcgcagcgtcggataatcaaatttagaagtgtgaaaaggagtttccattta--tgtctatgtggcaattatttttatga 12299623  T
Q  212 acaatgttgtgatg 225  Q
    |||||| |||||||    
T  12299622 acaatgatgtgatg 12299609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 31451052 - 31451010
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  31451052 ggctaaattgcatttttgatcccttaactatttaggtagtatc 31451010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 16736100 - 16736143
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  16736100 aggctaaattgcatttttggtcccttaactatttaggtagtatc 16736143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 17856577 - 17856534
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  17856577 taggctaaattgcatttttggtcccttaactatttaggtagtat 17856534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 31450665 - 31450708
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  31450665 aggctaaattgcatttttggtcccttaactatttaggtagtatc 31450708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 4104159 - 4104201
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  4104159 ggctaaattgcatttttggtcccttaactatttaggtagtatc 4104201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 4120764 - 4120806
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  4120764 ggctaaattgcattttttgtcccttaactatttaggtagtatc 4120806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 41377740 - 41377698
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  41377740 ggctaaattgcatttttggtcccttaactatttaggtagtatc 41377698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 12303786 - 12303827
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  12303786 gctaaattgcatttttggtcccttaactatttaggtagtatc 12303827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 487
Target Start/End: Complemental strand, 38275842 - 38275801
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  38275842 gctaaattgcattttttgtcccttaactatttaggtagtatc 38275801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 32933589 - 32933633
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||    
T  32933589 taggttaaattgcatttttggtcccttaactatttaggtagtatc 32933633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 39150213 - 39150169
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||    
T  39150213 taggctaaattgcatttttggtcctttaactatttaggtagtatc 39150169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 39454449 - 39454493
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||    
T  39454449 taggctaaattgcatttttggtcccttaactatttaagtagtatc 39454493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Complemental strand, 4121146 - 4121107
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  4121146 taaattgcatttttggtcccttaactatttaggtagtatc 4121107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 5961668 - 5961711
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||   |||||||||||||||||||||||    
T  5961668 aggctaaattgcatttttggccccttaactatttaggtagtatc 5961711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 16261257 - 16261214
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||    
T  16261257 aggctaaattgtatttttggtcccttaactatttaggtagtatc 16261214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Complemental strand, 18565386 - 18565347
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  18565386 taaattgcatttttggtcccttaactatttaggtagtatc 18565347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 25642655 - 25642612
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||    
T  25642655 aggctaaattgtatttttgttcccttaactatttaggtagtatc 25642612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 484
Target Start/End: Complemental strand, 27132896 - 27132857
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagt 484  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  27132896 ggctaaattgcatttttggtcccttaactatttaggtagt 27132857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 27476754 - 27476711
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  || |||||||||||||||||||||    
T  27476754 aggctaaattgcatttttggtctcttaactatttaggtagtatc 27476711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 28203247 - 28203204
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  |||||||||||||||||| |||||    
T  28203247 aggctaaattgcatttttggtcccttaactatttaggtcgtatc 28203204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 4104545 - 4104503
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| ||||||  ||||||||||||||||||||||||    
T  4104545 ggctaaattgtatttttggtcccttaactatttaggtagtatc 4104503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 20908897 - 20908855
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| ||||||  ||||||||||||||||||||||||    
T  20908897 ggctaaattgtatttttggtcccttaactatttaggtagtatc 20908855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 28202860 - 28202902
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||| ||||    
T  28202860 ggctaaattgcatttttggtcccttaactatttaggtaatatc 28202902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 32933977 - 32933935
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||| ||||    
T  32933977 ggctaaattgcatttttggtcccttaactatttaggtaatatc 32933935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 16260872 - 16260913
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||| ||||||||  ||||||||||||||||||||||||    
T  16260872 gctaaatagcatttttggtcccttaactatttaggtagtatc 16260913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 39913016 - 39912971
Alignment:
Q  443 taggctaaattgcatttttcatcccttaacta-tttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||    
T  39913016 taggctaaattgcatttttggtcccttaactattttaggtagtatc 39912971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 484
Target Start/End: Original strand, 45389129 - 45389170
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagt 484  Q
    |||||||||||||||||||  ||||| |||||||||||||||    
T  45389129 taggctaaattgcatttttggtccctgaactatttaggtagt 45389170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 13354565 - 13354521
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||| | ||||  ||||||||||||||||||||||||    
T  13354565 taggctaaattgtaattttggtcccttaactatttaggtagtatc 13354521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 14877481 - 14877525
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||  ||||||||||||||||||    
T  14877481 taggctaaattgcatttttggtcccaaaactatttaggtagtatc 14877525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 16655994 - 16655950
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||| ||||||  ||||||||||||||||||||||||    
T  16655994 taggttaaattgtatttttggtcccttaactatttaggtagtatc 16655950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 18565064 - 18565108
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  || |||||||||||||| ||||||    
T  18565064 taggctaaattgcatttttggtctcttaactatttaggcagtatc 18565108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 21470293 - 21470337
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||| ||||||||||||| ||||||    
T  21470293 taggctaaattgcatttttggtcctttaactatttaggcagtatc 21470337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 27132509 - 27132553
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||| ||||||  ||||||||||||||||||||||||    
T  27132509 taggttaaattgtatttttggtcccttaactatttaggtagtatc 27132553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 36442131 - 36442175
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||| ||||||  |||||| |||||||||||||||||    
T  36442131 taggctaaattgtatttttgttcccttcactatttaggtagtatc 36442175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 487
Target Start/End: Original strand, 37412595 - 37412635
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  37412595 ctaaattgcatttttggtcccttaactatttagttagtatc 37412635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 487
Target Start/End: Original strand, 37744451 - 37744491
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||| |||||||  ||||||||||||||||||||||||    
T  37744451 ctaaattacatttttggtcccttaactatttaggtagtatc 37744491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 487
Target Start/End: Original strand, 43183585 - 43183625
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||| |||||||  ||||||||||||||||||||||||    
T  43183585 ctaaattacatttttagtcccttaactatttaggtagtatc 43183625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 43183971 - 43183927
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||||||||||  |||||||| |||||||||||||||    
T  43183971 taggttaaattgcatttttggtcccttaattatttaggtagtatc 43183927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 44610860 - 44610904
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||||||||||  ||||||||||||||||||| ||||    
T  44610860 taggttaaattgcatttttggtcccttaactatttaggtaatatc 44610904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 8e-16; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 9037950 - 9038009
Alignment:
Q  375 tgacaataaggttaactaataaaatataaaacagtaacgataaaatgagatatcaattat 434  Q
    ||||||||||||| |||||| ||||||||||||  |||||||||||||||||||||||||    
T  9037950 tgacaataaggttcactaatgaaatataaaacaacaacgataaaatgagatatcaattat 9038009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 29864175 - 29864218
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  29864175 aggctaaattgcattttttatcccttaactatttaggtagtatc 29864218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 21218233 - 21218191
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  21218233 ggctaaattgcatttttgatcccttaactatttaggtagtatc 21218191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 21217846 - 21217889
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  21217846 aggctaaattgcatttttggtcccttaactatttaggtagtatc 21217889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 46200483 - 46200526
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  46200483 aggctaaattgcatttttggtcccttaactatttaggtagtatc 46200526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 54136090 - 54136133
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  54136090 aggctaaattgcatttttggtcccttaactatttaggtagtatc 54136133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 18862827 - 18862785
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  18862827 ggctaaattgcatttttggtcccttaactatttaggtagtatc 18862785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 40067734 - 40067692
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| |||||| |||||||||||||||||||||||||    
T  40067734 ggctaaattgtatttttgatcccttaactatttaggtagtatc 40067692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 44710403 - 44710445
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  44710403 ggctaaattgcatttttggtcccttaactatttaggtagtatc 44710445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 486
Target Start/End: Original strand, 10014465 - 10014506
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  10014465 ggctaaattgcatttttggtcccttaactatttaggtagtat 10014506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 486
Target Start/End: Original strand, 10017815 - 10017856
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  10017815 ggctaaattgcatttttggtcccttaactatttaggtagtat 10017856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 486
Target Start/End: Original strand, 10021606 - 10021647
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  10021606 ggctaaattgcatttttggtcccttaactatttaggtagtat 10021647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 486
Target Start/End: Original strand, 24503939 - 24503980
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
T  24503939 ggctaaattgcatttttaatcccttaattatttaggtagtat 24503980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 9010503 - 9010547
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  |||||||| |||||||||||||||    
T  9010503 taggctaaattgcatttttggtcccttaattatttaggtagtatc 9010547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 10014851 - 10014807
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||    
T  10014851 taggctaagttgcattttttgtcccttaactatttaggtagtatc 10014807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 10021992 - 10021948
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||    
T  10021992 taggctaagttgcattttttgtcccttaactatttaggtagtatc 10021948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 32385199 - 32385155
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||    
T  32385199 taggttaaattgcatttttggtcccttaactatttaggtagtatc 32385155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 38866396 - 38866440
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||    
T  38866396 taggctaaattgtatttttggtcccttaactatttaggtagtatc 38866440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 52914950 - 52914994
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||    
T  52914950 taggctaaattgtatttttggtcccttaactatttaggtagtatc 52914994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Original strand, 2738883 - 2738922
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  2738883 taaattgcatttttgatcccttaactatttaagtagtatc 2738922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 44428512 - 44428555
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||| || ||||||||||||||||| ||||    
T  44428512 aggctaaattgcatttttgataccttaactatttaggtattatc 44428555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Complemental strand, 46621310 - 46621271
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  46621310 taaattgcatttttggtcccttaactatttaggtagtatc 46621271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 48209947 - 48209990
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| |||||||  ||||||||||||||||||||||||    
T  48209947 aggctaaattacatttttggtcccttaactatttaggtagtatc 48209990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 1205763 - 1205721
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||| ||||||    
T  1205763 ggctaaattgcatttttggtcccttaactatttaggcagtatc 1205721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 32384653 - 32384695
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| ||||||  ||||||||||||||||||||||||    
T  32384653 ggctaaattgtatttttggtcccttaactatttaggtagtatc 32384695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 449 - 487
Target Start/End: Original strand, 33625868 - 33625906
Alignment:
Q  449 aaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  33625868 aaattgcatttttggtcccttaactatttaggtagtatc 33625906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 33626250 - 33626208
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||| |||||||  ||||||||||||||||||||||||    
T  33626250 ggctaaatttcatttttggtcccttaactatttaggtagtatc 33626208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 449 - 487
Target Start/End: Complemental strand, 33882331 - 33882293
Alignment:
Q  449 aaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  33882331 aaattgcatttttggtcccttaactatttaggtagtatc 33882293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 34958832 - 34958874
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| ||||||  ||||||||||||||||||||||||    
T  34958832 ggctaaattgtatttttggtcccttaactatttaggtagtatc 34958874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 45683117 - 45683159
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||    
T  45683117 ggctaaattacatttttgatctcttaactatttaggtagtatc 45683159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 46535523 - 46535565
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| ||||||  ||||||||||||||||||||||||    
T  46535523 ggctaaattgtatttttggtcccttaactatttaggtagtatc 46535565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 487
Target Start/End: Complemental strand, 11242849 - 11242808
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||| |||||||  ||||||||||||||||||||||||    
T  11242849 gctaaattacatttttggtcccttaactatttaggtagtatc 11242808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 487
Target Start/End: Complemental strand, 28570806 - 28570765
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||| ||| ||||||||||||||| |||||    
T  28570806 gctaaattgcatttttgatcacttaactatttaggtggtatc 28570765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 486
Target Start/End: Original strand, 46620931 - 46620968
Alignment:
Q  449 aaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||  |||||||||||||||||||||||    
T  46620931 aaattgcatttttggtcccttaactatttaggtagtat 46620968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 25058831 - 25058875
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||||||||||  || |||||||||||||||||||||    
T  25058831 taggttaaattgcattttttgtctcttaactatttaggtagtatc 25058875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 487
Target Start/End: Complemental strand, 29864559 - 29864519
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||| ||||||  ||||||||||||||||||||||||    
T  29864559 ctaaattgtatttttggtcccttaactatttaggtagtatc 29864519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 43317267 - 43317223
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  || | |||||||||||||||||||    
T  43317267 taggctaaattgcatttttagtctcctaactatttaggtagtatc 43317223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 485
Target Start/End: Complemental strand, 46200871 - 46200831
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagta 485  Q
    |||||||||||||||||  || |||||||||||||||||||    
T  46200871 ggctaaattgcatttttggtctcttaactatttaggtagta 46200831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 12593454 - 12593498
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  12593454 taggctaaattgcatttttgatcccttaactatttaggtagtatc 12593498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 10656480 - 10656438
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  10656480 ggctaaattgcatttttgatcccttaactatttaggtagtatc 10656438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 7399075 - 7399119
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  7399075 taggctaaattgcatttttggtcccttaactatttaggtagtatc 7399119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 16353542 - 16353498
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||    
T  16353542 taggctaaattgcatttttgatcccttaactatttaagtagtatc 16353498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 19204942 - 19204986
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  19204942 taggctaaattgcatttttggtcccttaactatttaggtagtatc 19204986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 35263492 - 35263536
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  35263492 taggctaaattgcatttttggtcccttaactatttaggtagtatc 35263536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 487
Target Start/End: Complemental strand, 19205326 - 19205287
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  19205326 taaattgcatttttgatcccttaactatttaggtagtatc 19205287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 29023936 - 29023979
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  29023936 aggctaaattgcatttttggtcccttaactatttaggtagtatc 29023979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 487
Target Start/End: Complemental strand, 8418569 - 8418528
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  8418569 gctaaattgcatttttggtcccttaactatttaggtagtatc 8418528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 12695074 - 12695030
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||| |||||||||||||  ||||||||||||||||||||||||    
T  12695074 taggccaaattgcatttttagtcccttaactatttaggtagtatc 12695030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 18514286 - 18514330
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||| ||||||    
T  18514286 taggctaaattgcatttttggtcccttaactatttaggaagtatc 18514330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 21750808 - 21750852
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||    
T  21750808 taggctaaattgcctttttggtcccttaactatttaggtagtatc 21750852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 33699273 - 33699317
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||    
T  33699273 taggctaaattgcatttatggtcccttaactatttaggtagtatc 33699317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 36752289 - 36752245
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||    
T  36752289 taggctaaattgcatttttggtcccttaactatttatgtagtatc 36752245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 38416141 - 38416185
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||||    
T  38416141 taggctaaattgcatttttaatctcttaattatttaggtagtatc 38416185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 40589442 - 40589398
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  | ||||||||||||||||||||||    
T  40589442 taggctaaattgcatttttggttccttaactatttaggtagtatc 40589398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 40590045 - 40590001
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  | ||||||||||||||||||||||    
T  40590045 taggctaaattgcatttttggttccttaactatttaggtagtatc 40590001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 10656093 - 10656136
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||    
T  10656093 aggctaaattgtatttttggtcccttaactatttaggtagtatc 10656136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Original strand, 25923121 - 25923160
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  25923121 taaattgtatttttgatcccttaactatttaggtagtatc 25923160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 484
Target Start/End: Original strand, 40589054 - 40589093
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagt 484  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  40589054 ggctaaattgcatttttggtcccttaactatttaggtagt 40589093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 484
Target Start/End: Original strand, 40589657 - 40589696
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagt 484  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  40589657 ggctaaattgcatttttggtcccttaactatttaggtagt 40589696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 334296 - 334338
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||| ||||||||||||||||||||    
T  334296 ggctaaattgcatttttagtcctttaactatttaggtagtatc 334338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 444 - 486
Target Start/End: Complemental strand, 3879399 - 3879357
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    ||||||||||||||||||  ||||||||||||||| |||||||    
T  3879399 aggctaaattgcatttttggtcccttaactatttaagtagtat 3879357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 449 - 487
Target Start/End: Complemental strand, 15267622 - 15267584
Alignment:
Q  449 aaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  15267622 aaattgcatttttgatcctttaactatttaggtagtatc 15267584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 444 - 486
Target Start/End: Complemental strand, 35263881 - 35263839
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    ||||||||||||||||||  |||||||| ||||||||||||||    
T  35263881 aggctaaattgcatttttggtcccttaattatttaggtagtat 35263839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 42710736 - 42710694
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| ||||||  ||||||||||||||||||||||||    
T  42710736 ggctaaattgtatttttggtcccttaactatttaggtagtatc 42710694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 486
Target Start/End: Complemental strand, 39706433 - 39706396
Alignment:
Q  449 aaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||  |||||||||||||||||||||||    
T  39706433 aaattgcatttttggtcccttaactatttaggtagtat 39706396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 5088516 - 5088472
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||| ||||||  || |||||||||||||||||||||    
T  5088516 taggctaaattgtatttttggtctcttaactatttaggtagtatc 5088472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 19615420 - 19615464
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||||||||||  |||||| |||||||||||||||||    
T  19615420 taggttaaattgcatttttggtcccttgactatttaggtagtatc 19615464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 40774339 - 40774379
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||| |||||||  |||||||||||||||||||||||    
T  40774339 gctaaatttcattttttgtcccttaactatttaggtagtat 40774379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 11601 - 11558
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  11601 aggctaaattgcattttttatcccttaactatttaggtagtatc 11558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 11639422 - 11639379
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  11639422 aggctaaattgcatttttcgtcccttaactatttaggtagtatc 11639379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 24457040 - 24456996
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  24457040 taggctaaattgcatttttggtcccttaactatttaggtagtatc 24456996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 24456733 - 24456776
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  24456733 aggctaaattgcatttttggtcccttaactatttaggtagtatc 24456776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 486
Target Start/End: Original strand, 30872781 - 30872824
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  30872781 taggctaaattgcatttttggtcccttaactatttaggtagtat 30872824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 119502 - 119460
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  119502 ggctaaattgcattgttgatcccttaactatttaggtagtatc 119460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 40040162 - 40040204
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  40040162 ggctaaattgcatttttggtcccttaactatttaggtagtatc 40040204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 486
Target Start/End: Original strand, 44678316 - 44678358
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  44678316 aggctaaattgcatttttggtcccttaactatttaggtagtat 44678358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 39240031 - 39240072
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  39240031 gctaaattgcatttttggtcccttaactatttaggtagtatc 39240072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 6843493 - 6843537
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||    
T  6843493 taggttaaattgcatttttggtcccttaactatttaggtagtatc 6843537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 35223772 - 35223816
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  |||||| |||||||||||||||||    
T  35223772 taggctaaattgcatttttggtccctttactatttaggtagtatc 35223816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 35224155 - 35224111
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  |||||||||||||||| |||||||    
T  35224155 taggctaaattgcatttttggtcccttaactatttagttagtatc 35224111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 487
Target Start/End: Complemental strand, 37393861 - 37393821
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  37393861 ctaaattgcatttttggtcccttaactatttaggtagtatc 37393821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 486
Target Start/End: Original strand, 119119 - 119158
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  119119 ctaaattgcatttttggtcccttaactatttaggtagtat 119158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 3869336 - 3869293
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||    
T  3869336 aggctaaattgtatttttggtcccttaactatttaggtagtatc 3869293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Original strand, 18017788 - 18017831
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    ||||||||||||||| |||  |||||||||||||||||||||||    
T  18017788 taggctaaattgcatatttggtcccttaactatttaggtagtat 18017831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 448 - 486
Target Start/End: Complemental strand, 16645931 - 16645893
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtat 486  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  16645931 taaattgcatttttggtcccttaactatttaggtagtat 16645893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 448 - 486
Target Start/End: Complemental strand, 36344344 - 36344306
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  36344344 taaattgcattttttatcctttaactatttaggtagtat 36344306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 480
Target Start/End: Original strand, 21512411 - 21512448
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttagg 480  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  21512411 taggctaaattgtatttttcgtcccttaactatttagg 21512448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 486
Target Start/End: Complemental strand, 31230999 - 31230958
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    ||||||||| |||||||  |||||||||||||||||||||||    
T  31230999 ggctaaattacatttttggtcccttaactatttaggtagtat 31230958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 758732 - 758688
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||| |||  ||||||||||||||| ||||||||    
T  758732 taggctaaattgcatgtttggtcccttaactatttaagtagtatc 758688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 487
Target Start/End: Original strand, 3868946 - 3868986
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| |||| |||||||||||||||| ||||||||    
T  3868946 ctaaattgcacttttgatcccttaactatttatgtagtatc 3868986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 5416810 - 5416854
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||| ||||||  |||| |||||||||||||||||||    
T  5416810 taggctaaattgtatttttggtcccctaactatttaggtagtatc 5416854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 487
Target Start/End: Complemental strand, 5417197 - 5417157
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||| |||||||||  ||||||||||||||||||||||||    
T  5417197 ctaaactgcatttttggtcccttaactatttaggtagtatc 5417157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 7042012 - 7041968
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  |||||||||||||||  |||||||    
T  7042012 taggctaaattgcatttttggtcccttaactatttatatagtatc 7041968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 479
Target Start/End: Complemental strand, 11198593 - 11198557
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttag 479  Q
    |||||||||||||||||||  ||||||||||||||||    
T  11198593 taggctaaattgcatttttggtcccttaactatttag 11198557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 483
Target Start/End: Original strand, 11639050 - 11639090
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtag 483  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  11639050 taggctaaattgtattttttgtcccttaactatttaggtag 11639090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 483
Target Start/End: Complemental strand, 26217485 - 26217449
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtag 483  Q
    |||||||||||||||  ||||||||||||||||||||    
T  26217485 ctaaattgcattttttgtcccttaactatttaggtag 26217449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 28207141 - 28207097
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||| ||||||||| ||||| | |||||||    
T  28207141 taggctaaattgcatttttgatcccttaattattttgctagtatc 28207097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 30650188 - 30650232
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  |||  |||||||||||||||||||    
T  30650188 taggctaaattgcatttttagtcctctaactatttaggtagtatc 30650232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 37393475 - 37393519
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||| ||||||  ||||||||||||||||||||||||    
T  37393475 taggttaaattgtatttttggtcccttaactatttaggtagtatc 37393519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 444 - 486
Target Start/End: Original strand, 33329205 - 33329247
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  33329205 aggctaaattgcatttttgatcccttaactatttaggtagtat 33329247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 487
Target Start/End: Complemental strand, 6220441 - 6220400
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  6220441 gctaaattgcatttttaatcccttaactatttaggtagtatc 6220400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 3338475 - 3338519
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  3338475 taggctaaattgcattttttgtcccttaactatttaggtagtatc 3338519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 14337288 - 14337246
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  14337288 aggctaaattgcattttt-atcccttaactatttaggtagtatc 14337246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 3288929 - 3288972
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||| |  ||||||||||||||||||||||||    
T  3288929 aggctaaattgcatttatggtcccttaactatttaggtagtatc 3288972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 11525152 - 11525109
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||    
T  11525152 aggctaaattgcatttttggtcccttaacaatttaggtagtatc 11525109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Original strand, 24604878 - 24604917
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  24604878 taaattgcatttttggtcccttaactatttaggtagtatc 24604917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Original strand, 31029527 - 31029566
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  31029527 taaattgcatttttgatcccttaattatttaggtagtatc 31029566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 33548244 - 33548201
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||    
T  33548244 aggctaaattgaatttttagtcccttaactatttaggtagtatc 33548201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 35132600 - 35132643
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||    
T  35132600 aggctaaattgcatttttggtccattaactatttaggtagtatc 35132643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 9173901 - 9173943
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| ||||||  ||||||||||||||||||||||||    
T  9173901 ggctaaattgtatttttggtcccttaactatttaggtagtatc 9173943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 14336902 - 14336944
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||    
T  14336902 ggctaaattgcatttttgatcccttaattatttagctagtatc 14336944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 444 - 486
Target Start/End: Original strand, 25551346 - 25551388
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    ||||||||||| ||||||  |||||||||||||||||||||||    
T  25551346 aggctaaattgtatttttggtcccttaactatttaggtagtat 25551388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 448 - 486
Target Start/End: Original strand, 33971931 - 33971969
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtat 486  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  33971931 taaattgcatttttggtcccttaactatttaggtagtat 33971969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 481
Target Start/End: Complemental strand, 1860871 - 1860835
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggt 481  Q
    |||||||||||||||||  ||||||||||||||||||    
T  1860871 ggctaaattgcatttttggtcccttaactatttaggt 1860835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 2949294 - 2949338
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||| ||||||||||| ||||||||    
T  2949294 taggctaaattgcattttttgtccgttaactatttaagtagtatc 2949338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 19135834 - 19135790
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||| |||| |||||||||||||||    
T  19135834 taggctaaattgcatttttggtccattaagtatttaggtagtatc 19135790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 43527023 - 43527065
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  43527023 ggctaaattgcatttttgatcccttaactatttaggtagtatc 43527065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 4846984 - 4846940
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  4846984 taggctaaattgcatttttggtcccttaactatttaggtagtatc 4846940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 12123088 - 12123132
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  12123088 taggctaaattgcatttttggtcccttaactatttaggtagtatc 12123132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 15862563 - 15862519
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  15862563 taggctaaattgcattttttgtcccttaactatttaggtagtatc 15862519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 31514250 - 31514206
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  31514250 taggctaaattgcatttttagtcccttaactatttaggtagtatc 31514206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 41208788 - 41208744
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  41208788 taggctaaattgcatttttagtcccttaactatttaggtagtatc 41208744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 487
Target Start/End: Complemental strand, 51170765 - 51170725
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  51170765 ctaaattgcatttttgatcccttaactatttaggtagtatc 51170725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 45871696 - 45871739
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  45871696 aggctaaattgcatttttggtcccttaactatttaggtagtatc 45871739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 8846462 - 8846420
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  8846462 ggctaaattgcatttttggtcccttaactatttaggtagtatc 8846420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 44069123 - 44069165
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  44069123 ggctaaattgcatttttggtcccttaactatttaggtagtatc 44069165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 54107669 - 54107711
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  54107669 ggctaaattgcatttttggtcccttaactatttaggtagtatc 54107711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 486
Target Start/End: Original strand, 8846076 - 8846117
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  8846076 ggctaaattgcatttttggtcccttaactatttaggtagtat 8846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 487
Target Start/End: Complemental strand, 45171452 - 45171411
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  45171452 gctaaattgcatttttagtcccttaactatttaggtagtatc 45171411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 9028189 - 9028233
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||    
T  9028189 taggctaaattacatttttggtcccttaactatttaggtagtatc 9028233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 14353044 - 14353088
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||    
T  14353044 taggttaaattgcatttttgatcccttaattatttaggtagtatc 14353088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 34521264 - 34521308
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  |||||||| |||||||||||||||    
T  34521264 taggctaaattgcatttttggtcccttaattatttaggtagtatc 34521308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 41998202 - 41998158
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||    
T  41998202 taggctaaattgtatttttggtcccttaactatttaggtagtatc 41998158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 7274652 - 7274695
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  |||||||| |||||||||||||||    
T  7274652 aggctaaattgcatttttggtcccttaaatatttaggtagtatc 7274695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 26332318 - 26332361
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  |||| |||||||||||||||||||    
T  26332318 aggctaaattgcatttttggtcccctaactatttaggtagtatc 26332361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 28688377 - 28688334
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| |||||||  ||||||||||||||||||||||||    
T  28688377 aggctaaattacattttttgtcccttaactatttaggtagtatc 28688334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Complemental strand, 34521640 - 34521601
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  34521640 taaattgcatttttggtcccttaactatttaggtagtatc 34521601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Complemental strand, 35580332 - 35580293
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  35580332 taaattgcatttttggtcccttaactatttaggtagtatc 35580293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Original strand, 40410715 - 40410754
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  40410715 taaattgcatttttggtcccttaactatttaggtagtatc 40410754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 41997818 - 41997861
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| |||||||  ||||||||||||||||||||||||    
T  41997818 aggctaaattacatttttggtcccttaactatttaggtagtatc 41997861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 44069510 - 44069467
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||    
T  44069510 aggctaaattgtatttttggtcccttaactatttaggtagtatc 44069467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 444 - 486
Target Start/End: Original strand, 7950274 - 7950316
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    ||||||||||||||||||  ||||||||||||||| |||||||    
T  7950274 aggctaaattgcatttttagtcccttaactatttatgtagtat 7950316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 27940272 - 27940314
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||| |||||||  ||||||||||||||||||||||||    
T  27940272 ggctaaatttcatttttggtcccttaactatttaggtagtatc 27940314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 31513863 - 31513905
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||| ||||||||||||||||||||    
T  31513863 ggctaaattgcatttttggtccattaactatttaggtagtatc 31513905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 51883859 - 51883901
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||| ||||||||||||||||  |||||||    
T  51883859 ggctaaattgcatttttaatcccttaactatttaattagtatc 51883901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 444 - 486
Target Start/End: Complemental strand, 54081671 - 54081629
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    ||||||||||| ||||||  |||||||||||||||||||||||    
T  54081671 aggctaaattgtatttttggtcccttaactatttaggtagtat 54081629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 487
Target Start/End: Original strand, 35753408 - 35753445
Alignment:
Q  450 aattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  35753408 aattgcatttttggtcccttaactatttaggtagtatc 35753445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 473
Target Start/End: Complemental strand, 43527311 - 43527282
Alignment:
Q  444 aggctaaattgcatttttcatcccttaact 473  Q
    ||||||||||||||||||||||||||||||    
T  43527311 aggctaaattgcatttttcatcccttaact 43527282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 12123467 - 12123423
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| |||||| |||||||  ||||||||||||||||||||||||    
T  12123467 taggttaaatttcatttttggtcccttaactatttaggtagtatc 12123423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 26332710 - 26332667
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||    
T  26332710 taggctaaattgcatttttggtcc-ttaactatttaggtagtatc 26332667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 487
Target Start/End: Complemental strand, 40926394 - 40926354
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||  |||| |||||||||||||||||||    
T  40926394 ctaaattgcatttttagtcccctaactatttaggtagtatc 40926354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 41208399 - 41208443
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||||||||||  ||||||||||||||| ||||||||    
T  41208399 taggttaaattgcatttttggtcccttaactatttaagtagtatc 41208443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 43899462 - 43899418
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  | ||||||||||||||||| ||||    
T  43899462 taggctaaattgcatttttggttccttaactatttaggtaatatc 43899418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 4706 - 4662
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  4706 taggctaaattgcatttttggtcccttaactatttaggtagtatc 4662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 23437150 - 23437194
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  23437150 taggctaaattgcatttttgattccttaactatttaggtagtatc 23437194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 35085737 - 35085781
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  35085737 taggctaaattgcatttttggtcccttaactatttaggtagtatc 35085781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 10625471 - 10625428
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  10625471 aggctaaattgcatttttggtcccttaactatttaggtagtatc 10625428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 31716008 - 31715965
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  31716008 aggctaaattgcatttttggtcccttaactatttaggtagtatc 31715965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 486
Target Start/End: Original strand, 32706730 - 32706773
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  32706730 taggctaaattgcatttttggtcccttaactatttaggtagtat 32706773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 47250933 - 47250890
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  47250933 aggctaaattgcatttttggtcccttaactatttaggtagtatc 47250890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 486
Target Start/End: Complemental strand, 47251283 - 47251241
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  47251283 aggctaaattgcattttttgtcccttaactatttaggtagtat 47251241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 5238449 - 5238493
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||    
T  5238449 taggctaaattgcatttttgatccattaactgtttaggtagtatc 5238493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 487
Target Start/End: Complemental strand, 8769666 - 8769626
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  8769666 ctaaattgcatttttagtcccttaactatttaggtagtatc 8769626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 10625104 - 10625148
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||    
T  10625104 taggctaaattacatttttggtcccttaactatttaggtagtatc 10625148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 23472591 - 23472635
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||    
T  23472591 taggctaaattgtatttttggtcccttaactatttaggtagtatc 23472635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 473191 - 473234
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||    
T  473191 aggctaaattgcatttttgatcgcttaactatttaggcagtatc 473234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Original strand, 8769280 - 8769323
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||| ||||||||||||||  |||||||||||||||||||||||    
T  8769280 taggttaaattgcatttttggtcccttaactatttaggtagtat 8769323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 484
Target Start/End: Complemental strand, 23439551 - 23439512
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagt 484  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  23439551 ggctaaattgcatttttgatcccttaactacttaggtagt 23439512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 484
Target Start/End: Complemental strand, 23472942 - 23472903
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagt 484  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  23472942 ggctaaattgcatttttggtcccttaactatttaggtagt 23472903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 35086127 - 35086084
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||    
T  35086127 aggctaaattgcatttttggtcctttaactatttaggtagtatc 35086084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 43726630 - 43726587
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||||||  |||||||||||||||||| ||||    
T  43726630 taggctaaattgcatttttggtcccttaactatttaggtggtat 43726587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 18731019 - 18731061
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  |||||||||||||||| |||||||    
T  18731019 ggctaaattgcatttttggtcccttaactatttagatagtatc 18731061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 44486318 - 44486276
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||| ||||||||||||||||||||    
T  44486318 ggctaaattgcatttttggtcctttaactatttaggtagtatc 44486276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 9034703 - 9034659
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||| ||||||  ||| ||||||||||||||||||||    
T  9034703 taggctaaattgtatttttggtcctttaactatttaggtagtatc 9034659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 31715631 - 31715675
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||| ||||||  || |||||||||||||||||||||    
T  31715631 taggctaaattgtattttttgtctcttaactatttaggtagtatc 31715675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 9881550 - 9881594
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  9881550 taggctaaattgcatttttggtcccttaactatttaggtagtatc 9881594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 14118528 - 14118572
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  14118528 taggctaaattgcatttttggtcccttaactatttaggtagtatc 14118572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 16268077 - 16268033
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  16268077 taggctaaattgcatttttggtcccttaactatttaggtagtatc 16268033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 23281398 - 23281354
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  23281398 taggctaaattgcatttttggtcccttaactatttaggtagtatc 23281354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 25088014 - 25088058
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  25088014 taggctaaattgcatttttggtcccttaactatttaggtagtatc 25088058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 487
Target Start/End: Original strand, 31125938 - 31125978
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  31125938 ctaaattgcatttttgatcccttaactatttaggtagtatc 31125978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 33753223 - 33753267
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  33753223 taggctaaattgcatttttggtcccttaactatttaggtagtatc 33753267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 34028719 - 34028763
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  34028719 taggctaaattgcatttttggtcccttaactatttaggtagtatc 34028763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 34029109 - 34029065
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  34029109 taggctaaattgcatttttggtcccttaactatttaggtagtatc 34029065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 45305797 - 45305753
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  45305797 taggctaaattgcatttttggtcccttaactatttaggtagtatc 45305753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 486
Target Start/End: Original strand, 28112719 - 28112762
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  28112719 taggctaaattgcatttttggtcccttaactatttaggtagtat 28112762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 34279628 - 34279585
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  34279628 aggctaaattgcatttttggtcccttaactatttaggtagtatc 34279585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 51691874 - 51691916
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  51691874 ggctaaattgcatttttggtcccttaactatttaggtagtatc 51691916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 50921061 - 50921102
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  50921061 gctaaattgcatttttggtcccttaactatttaggtagtatc 50921102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 487
Target Start/End: Original strand, 11787742 - 11787782
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  11787742 ctaaattgaatttttgatcccttaactatttaggtagtatc 11787782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 19986510 - 19986466
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||    
T  19986510 taggataaattgcatttttggtcccttaactatttaggtagtatc 19986466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 21385324 - 21385280
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||| |||| |||||||||||||||| ||||||||    
T  21385324 taggctaaattgcacttttaatcccttaactatttaagtagtatc 21385280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 32564337 - 32564293
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||    
T  32564337 taggctaaattgcatttttagtcctttaactatttaggtagtatc 32564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 487
Target Start/End: Original strand, 35986234 - 35986274
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  35986234 ctaaattgcatttttgttcccttaactatttaggtagtatc 35986274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 36077269 - 36077313
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  |||||||| |||||||||||||||    
T  36077269 taggctaaattgcatttttggtcccttaattatttaggtagtatc 36077313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 18794081 - 18794038
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||||||  ||||||||||||||| |||||||    
T  18794081 taggctaaattgcatttttggtcccttaactatttaagtagtat 18794038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 28970418 - 28970461
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||    
T  28970418 aggctaaattgcatttttggtcctttaactatttaggtagtatc 28970461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Complemental strand, 30293395 - 30293356
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  30293395 taaattgcatttttggtcccttaactatttaggtagtatc 30293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Complemental strand, 32517894 - 32517855
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  32517894 taaattgcatttttgatcccttatctatttaggtagtatc 32517855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 46949755 - 46949798
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||| || | ||||||||||||||||||||    
T  46949755 aggctaaattgcatttttaattcattaactatttaggtagtatc 46949798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 487
Target Start/End: Complemental strand, 49291366 - 49291327
Alignment:
Q  448 taaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  49291366 taaattgcatttttcgtcccttaactatttagatagtatc 49291327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 50921478 - 50921435
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||| |||||||  ||||||||||||||||||||||||    
T  50921478 aggctaaattacatttttggtcccttaactatttaggtagtatc 50921435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 443 - 485
Target Start/End: Original strand, 10654028 - 10654070
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagta 485  Q
    |||||||||||||||||||  |||||||| |||||||||||||    
T  10654028 taggctaaattgcatttttggtcccttaattatttaggtagta 10654070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 14776121 - 14776079
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  || |||||||||||||||||||||    
T  14776121 ggctaaattgcatttttggtcacttaactatttaggtagtatc 14776079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 484
Target Start/End: Complemental strand, 11395044 - 11395007
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagt 484  Q
    |||||||||||||||  |||||||||||||||||||||    
T  11395044 ctaaattgcatttttggtcccttaactatttaggtagt 11395007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 16267716 - 16267757
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||||  ||||||||||||||||||| ||||    
T  16267716 gctaaattgcatttttggtcccttaactatttaggtaatatc 16267757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 487
Target Start/End: Complemental strand, 30611606 - 30611565
Alignment:
Q  446 gctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||| |||||| ||||||||||||||||||| |||||    
T  30611606 gctaaattgtatttttgatcccttaactatttaggttgtatc 30611565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 487
Target Start/End: Original strand, 21035987 - 21036027
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||||||||||||| || |||||||||||||| |||||||    
T  21035987 ctaaattgcatttttgattccttaactatttagatagtatc 21036027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 24655974 - 24655930
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  || |||||||||||| ||||||||    
T  24655974 taggctaaattgcatttttagtctcttaactatttaagtagtatc 24655930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 30293011 - 30293055
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||||||||||  ||| ||||||||||||||||||||    
T  30293011 taggttaaattgcatttttggtccattaactatttaggtagtatc 30293055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 32563958 - 32563994
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttagg 480  Q
    ||||||||||||||||||  |||||||||||||||||    
T  32563958 aggctaaattgcatttttggtcccttaactatttagg 32563994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 485
Target Start/End: Original strand, 34279240 - 34279280
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagta 485  Q
    |||||||||||||||||  || |||||||||||||||||||    
T  34279240 ggctaaattgcatttttggtctcttaactatttaggtagta 34279280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 37199309 - 37199265
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||| ||||||||||||||  | ||||||||||||||||||||||    
T  37199309 taggttaaattgcatttttggttccttaactatttaggtagtatc 37199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 487
Target Start/End: Complemental strand, 50574897 - 50574861
Alignment:
Q  451 attgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||  ||||||||||||||||||||||||    
T  50574897 attgcatttttggtcccttaactatttaggtagtatc 50574861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 487
Target Start/End: Complemental strand, 51692254 - 51692214
Alignment:
Q  447 ctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||  ||||||||||||||||||| ||||    
T  51692254 ctaaattgcatttttggtcccttaactatttaggtaatatc 51692214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 11873 - 11831
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  11873 ggctaaattgcatttttggtcccttaactatttaggtagtatc 11831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 479
Target Start/End: Original strand, 11486 - 11522
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttag 479  Q
    |||||||||||||||||||  ||||||||||||||||    
T  11486 taggctaaattgcatttttggtcccttaactatttag 11522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 486
Target Start/End: Complemental strand, 40738 - 40697
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtat 486  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  40738 ggctaaattgcatttttggtcccttaactatttaggtagtat 40697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 11638 - 11681
Alignment:
Q  444 aggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||| || ||||||||||||||||| ||||    
T  11638 aggctaaattgcatttttgataccttaactatttaggtattatc 11681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 45222 - 45180
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||  ||||||||||||||||||| ||||    
T  45222 ggctaaattgcatttttagtcccttaactatttaggtattatc 45180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 90805 - 90847
Alignment:
Q  445 ggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    ||||| |||||||||||  ||||||||||||||||||||||||    
T  90805 ggctacattgcatttttagtcccttaactatttaggtagtatc 90847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1436 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1436
Description:

Target: scaffold1436; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Original strand, 1474 - 1518
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||| ||||||||||  || |||||||||||||||||||||    
T  1474 taggctaagttgcattttttgtcacttaactatttaggtagtatc 1518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 487
Target Start/End: Complemental strand, 177453 - 177409
Alignment:
Q  443 taggctaaattgcatttttcatcccttaactatttaggtagtatc 487  Q
    |||||||||||||||||||  |||||||| |||||||||| ||||    
T  177453 taggctaaattgcatttttggtcccttaattatttaggtattatc 177409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University