View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8758_high_29 (Length: 289)
Name: NF8758_high_29
Description: NF8758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8758_high_29 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 270
Target Start/End: Original strand, 33385174 - 33385433
Alignment:
| Q |
13 |
attatacttgacatgatggtgagaatatggttcagaaacaaatgaagggggttacttttggttcaattattagtcgaaccatggacagctcagctctaac |
112 |
Q |
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| T |
33385174 |
attatacttgacatgatggtgagaatatggttcagaaacaaatgaagggggctacttttggttcaattattagtcgaaccatggacaggtc-----taac |
33385268 |
T |
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| Q |
113 |
cattttcatgtcaaaaagtagtaactacacctggaaacaagtttttgacattatttcatctgatgcaatgtgcaaaggtaagtgaattttgtc------- |
205 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33385269 |
cattttcatgtcaaaaagtaataactacacctggaaacaagtttttgacattatttcatctgatgcaatgtgcaaaggtaagtgaattttgtcttgcgtg |
33385368 |
T |
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| Q |
206 |
aaaatccagatatttctaattttggacaataatgatcaaaaccaaaattttgaaactggacccac |
270 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33385369 |
aaaatccagatatttctaattttggacaataatgatcaaaaccaaaattttgaaactggacccac |
33385433 |
T |
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