View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8758_high_45 (Length: 229)
Name: NF8758_high_45
Description: NF8758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8758_high_45 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 43875329 - 43875557
Alignment:
| Q |
1 |
atgccagagcaattcagaattcattgttctcaagaatatgatgctgcctggtgcctagaagactagcaccattcagaaactaatgctgatgctattccac |
100 |
Q |
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| T |
43875329 |
atgccagagcaattcagaattcattgttctcaagaatatgatgctgcctggtgcctagaagactagcaccattcagaaactaatgctgatgctatttcac |
43875428 |
T |
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| Q |
101 |
tgtttcatttgttttttgaatgcaatgcatttactatcatcaatacaacacttattttgaaaccaaaacagtactcagaaaaacataacaaataacaaag |
200 |
Q |
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| T |
43875429 |
tgttttatttgttttttgaatgcaatgcatttactatcatcaatacaacacttattttgaaaccaaaacagtactcagaaaaacataacaaataacaaag |
43875528 |
T |
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| Q |
201 |
acaactagtcaatttgggggaaaacatca |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
43875529 |
acaactagtcaatttgggggaaaacatca |
43875557 |
T |
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