View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8758_high_46 (Length: 214)
Name: NF8758_high_46
Description: NF8758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8758_high_46 |
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Alignment Details
Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 27 - 198
Target Start/End: Original strand, 47518484 - 47518655
Alignment:
| Q |
27 |
gttataagtgaacaatattacaacttatttagacccaaataatggttgtatccaggttcctcccctgtaacaaatgtaatgtattcaaactaataattag |
126 |
Q |
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| T |
47518484 |
gttagaagtgaacaatattacaacttatttagacctaaataatggttgtatccaggttcctcccatgtaacaaatgtaatgtattcaaactaataattag |
47518583 |
T |
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| Q |
127 |
aaaacaatccactaatgtgacacaaactttcatggagagcaaagtttcatgtatatgcttcatttgttcatg |
198 |
Q |
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| T |
47518584 |
aaaacaatccactaatgtgacacaaactttcatggagagcaaagtttcatgtatgtgcttcatttgttcatg |
47518655 |
T |
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