View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8758_low_10 (Length: 482)

Name: NF8758_low_10
Description: NF8758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8758_low_10
NF8758_low_10
[»] chr7 (10 HSPs)
chr7 (18-465)||(673407-673845)
chr7 (30-76)||(31393764-31393810)
chr7 (19-108)||(18125552-18125641)
chr7 (19-76)||(23475647-23475704)
chr7 (19-76)||(30650342-30650399)
chr7 (19-76)||(45886089-45886146)
chr7 (38-76)||(29015325-29015363)
chr7 (19-76)||(17884944-17885001)
chr7 (19-72)||(17885162-17885215)
chr7 (19-72)||(38140114-38140167)
[»] chr8 (6 HSPs)
chr8 (19-108)||(40248666-40248755)
chr8 (19-106)||(11255329-11255416)
chr8 (41-76)||(40789272-40789307)
chr8 (18-76)||(28077311-28077369)
chr8 (27-63)||(29109150-29109186)
chr8 (19-63)||(39445886-39445930)
[»] chr4 (10 HSPs)
chr4 (19-108)||(4766640-4766729)
chr4 (27-106)||(43892194-43892273)
chr4 (19-109)||(15987554-15987644)
chr4 (19-107)||(55826948-55827036)
chr4 (19-72)||(1724635-1724688)
chr4 (19-76)||(5902939-5902996)
chr4 (19-76)||(6382599-6382656)
chr4 (19-76)||(11123192-11123249)
chr4 (27-108)||(44887587-44887668)
chr4 (20-108)||(47239711-47239799)
[»] chr2 (7 HSPs)
chr2 (19-108)||(37106381-37106470)
chr2 (19-75)||(37999193-37999249)
chr2 (19-76)||(10208754-10208811)
chr2 (19-72)||(12341525-12341578)
chr2 (39-108)||(13705706-13705775)
chr2 (19-108)||(13830411-13830500)
chr2 (19-63)||(8916260-8916304)
[»] chr5 (8 HSPs)
chr5 (19-76)||(10126815-10126872)
chr5 (19-76)||(42987802-42987859)
chr5 (19-109)||(12834901-12834991)
chr5 (19-72)||(5909007-5909060)
chr5 (19-76)||(20973810-20973867)
chr5 (27-75)||(8020263-8020311)
chr5 (19-63)||(15889931-15889975)
chr5 (19-63)||(17853605-17853649)
[»] chr3 (10 HSPs)
chr3 (19-108)||(23580502-23580591)
chr3 (19-108)||(29841982-29842071)
chr3 (27-109)||(52197826-52197908)
chr3 (19-72)||(7470102-7470155)
chr3 (19-108)||(29284010-29284099)
chr3 (19-76)||(31127119-31127176)
chr3 (19-76)||(34025666-34025723)
chr3 (27-72)||(44638986-44639031)
chr3 (19-63)||(34154136-34154180)
chr3 (20-72)||(44107124-44107176)
[»] chr1 (12 HSPs)
chr1 (36-108)||(16433502-16433574)
chr1 (19-76)||(13390162-13390219)
chr1 (19-76)||(17092284-17092341)
chr1 (19-72)||(19572819-19572872)
chr1 (19-76)||(20774339-20774396)
chr1 (19-76)||(23493649-23493706)
chr1 (19-72)||(28297644-28297697)
chr1 (19-76)||(29936124-29936181)
chr1 (19-63)||(24710578-24710622)
chr1 (27-71)||(30685415-30685459)
chr1 (19-63)||(34060344-34060388)
chr1 (19-63)||(40087782-40087826)
[»] scaffold0519 (1 HSPs)
scaffold0519 (19-106)||(9979-10066)
[»] scaffold0036 (1 HSPs)
scaffold0036 (19-72)||(33106-33159)
[»] chr6 (8 HSPs)
chr6 (19-72)||(2367037-2367090)
chr6 (19-72)||(5863696-5863749)
chr6 (19-72)||(7394210-7394263)
chr6 (19-108)||(12141072-12141161)
chr6 (19-76)||(24225407-24225464)
chr6 (27-76)||(32052763-32052812)
chr6 (20-108)||(9442324-9442412)
chr6 (19-63)||(14254680-14254724)
[»] scaffold0095 (1 HSPs)
scaffold0095 (19-63)||(32848-32892)


Alignment Details
Target: chr7 (Bit Score: 332; Significance: 0; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 18 - 465
Target Start/End: Original strand, 673407 - 673845
Alignment:
Q  18 agataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcgatgacacag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||    
T  673407 agataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgggtattgataaaataattgataagtatatgagaatcaatgacaaag 673506  T
Q  118 aaggtaaattccgtctccacctcataccaatgataccattgtcatgcctagttatatcgtagtcaattattctaacnnnnnnnnagtaacaaagcaaatg 217  Q
    ||||||||||||||||||||||||| |||         |||||||||||||||||||||| || ||||||||||||        ||||||||||||||||    
T  673507 aaggtaaattccgtctccacctcatccca---------ttgtcatgcctagttatatcgtggttaattattctaacttttttt-agtaacaaagcaaatg 673596  T
Q  218 aattagttccgactatgagattttgggttctgcaaattgagaaaataatatcctaagatttattttgatatttcattga-annnnnnnnaatagttggtt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |        |||||||||||    
T  673597 aattagttccgactatgagattttgggttctgcaaattgagaaaataatatcctaagatttattttgatatttcattgagaatgtttttaatagttggtt 673696  T
Q  317 ctttatcaagtggtggagatggagttgggctaacgttgtgaagcttcctccgtccttgtgtttgacctaaacgtgtgttagattcaattgttgtttggtt 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  673697 ctttatcaagtggtggagatggagttgggctaacgttgtgaagcttcctccgtccttgtgtttgacctaaacgtgtgttagattcaattgttgtttggtt 673796  T
Q  417 caattgggggtgcggggcgatagccttaatagtacgttttaggggtatt 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  673797 caattgggggtgcggggcgatagccttaatagtacgttttaggggtatt 673845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 31393764 - 31393810
Alignment:
Q  30 ccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  31393764 ccgtcggagacggggatgagattcaatttctcatctccgttggatat 31393810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 18125552 - 18125641
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  ||||| ||||| ||||  ||||    |||||||||||||||||    
T  18125552 gatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttagatatggataggataacgagtaagtatatgagaatcg 18125641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 23475647 - 23475704
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||||  ||| |||||||    
T  23475647 gatacccgaacccgtcagagacggggatgagattcgatttctcatacccgctggatat 23475704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 30650399 - 30650342
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  |||||||||||    
T  30650399 gatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatat 30650342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 45886089 - 45886146
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  |||||||||||    
T  45886089 gatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatat 45886146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 29015325 - 29015363
Alignment:
Q  38 gacggggaggagattcaatttctcatttccgttggatat 76  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  29015325 gacggggatgagattcaatttctcatctccgttggatat 29015363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 17885001 - 17884944
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  |||||| ||||    
T  17885001 gatacccaaacccgtcggggacggggatgagattcaatttctcatccccgttgaatat 17884944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 17885215 - 17885162
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  |||||||    
T  17885215 gatacccaaacccgtcggggacggggatgagattcaatttctcatccccgttgg 17885162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 38140114 - 38140167
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  |||||||    
T  38140114 gatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgg 38140167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 40248666 - 40248755
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    ||||||| |||||||| |||||||||| |||||||||||||||||   |||||||||| | ||  ||||  |||||||||||||||||||    
T  40248666 gatacccgaacccgtcggagacggggatgagattcaatttctcatcctcgttggatatgggtaggataacggataagtatatgagaatcg 40248755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 11255329 - 11255416
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaat 106  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  ||||||  ||| ||||   |||  |||||||||||||||||    
T  11255329 gatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgagtatggatagggtaacggataagtatatgagaat 11255416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 40789307 - 40789272
Alignment:
Q  41 ggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||| ||||||||||||||||||||||||||||||    
T  40789307 ggggatgagattcaatttctcatttccgttggatat 40789272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 28077311 - 28077369
Alignment:
Q  18 agataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||||||||||||||| |||||||| ||||||  ||||||||| | | ||||||||    
T  28077311 agataccctaacccgtcagggacggggatgagatttgatttctcatcttcattggatat 28077369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 29109150 - 29109186
Alignment:
Q  27 aacccgtcagagacggggaggagattcaatttctcat 63  Q
    |||||||| |||||||||| |||||||||||||||||    
T  29109150 aacccgtcggagacggggatgagattcaatttctcat 29109186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 39445886 - 39445930
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcat 63  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||    
T  39445886 gatacccgaacccgtcggggacggggatgagattcaatttctcat 39445930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 4766640 - 4766729
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    ||||||| |||||||||  |||||||| ||||||||||||||||| |||||||| ||| ||||   |||  | |||||||||||||||||    
T  4766640 gatacccgaacccgtcaaggacggggatgagattcaatttctcatctccgttgggtatggatagggtaacaggtaagtatatgagaatcg 4766729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 43892273 - 43892194
Alignment:
Q  27 aacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaat 106  Q
    |||||||| | |||||||| |||||||||||||||||  ||||||||||| | |||  |||| | |||||||||||||||    
T  43892273 aacccgtcggggacggggatgagattcaatttctcatccccgttggatatgggtaaggtaatgggtaagtatatgagaat 43892194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 15987554 - 15987644
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcga 109  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  ||||||||||| | ||   |||  | ||||||||||||||||||    
T  15987554 gatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatatgggtagggtaacaggtaagtatatgagaatcga 15987644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 55826948 - 55827036
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatc 107  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  || |||||||| | ||   |||  ||||||||||||||||||    
T  55826948 gatacccgaacccgtcggggacggggatgagattcaatttctcatccccattggatatgggtagggtaacagataagtatatgagaatc 55827036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 1724635 - 1724688
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    ||||||| |||||||||| |||||||| ||| |||||||||||||  |||||||    
T  1724635 gatacccaaacccgtcagggacggggatgaggttcaatttctcatccccgttgg 1724688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 5902939 - 5902996
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||||| |||||||| | |||||||||||||||   ||||||||||    
T  5902939 gatacccgaacccgtcagggacggggatgggattcaatttctcatcctcgttggatat 5902996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 6382599 - 6382656
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||  | |||||||| |||||||||||||||||  |||||||||||    
T  6382599 gatacccgaacccgttggggacggggatgagattcaatttctcatccccgttggatat 6382656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 11123192 - 11123249
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| | |||||||| | |||||||||| |||| ||||||||||||    
T  11123192 gatacccgaacccgtcggggacggggatgtgattcaatttatcatctccgttggatat 11123249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 44887668 - 44887587
Alignment:
Q  27 aacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    |||||||| | |||||||| |||||||||||||||||  || |||||||| ||||   |||  | |||||||||||||||||    
T  44887668 aacccgtcggggacggggatgagattcaatttctcatccccattggatatggatagggtaacaggtaagtatatgagaatcg 44887587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 47239711 - 47239799
Alignment:
Q  20 ataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    |||||| || ||||| | |||||||| |||||||||||||||||  ||||| ||||| ||||   |||  ||||| |||||||||||||    
T  47239711 atacccaaatccgtcggggacggggatgagattcaatttctcatccccgtttgatatggatagggtaacggataaatatatgagaatcg 47239799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 37106470 - 37106381
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||   |||||| ||| ||||   |||| ||||| |||||||||||||    
T  37106470 gatacccgaacccgtcagggacggggatgagattcaatttctcatcctcgttgggtatggataggctaatggataaatatatgagaatcg 37106381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 37999249 - 37999193
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggata 75  Q
    ||||||| |||||||| |||||||||| |||||||||||||||||  ||||||||||    
T  37999249 gatacccgaacccgtcggagacggggatgagattcaatttctcatccccgttggata 37999193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 10208754 - 10208811
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  |||||||||||    
T  10208754 gatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttggatat 10208811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 12341578 - 12341525
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    ||||||| |||||||| | |||||||| |||||| ||||||||||| |||||||    
T  12341578 gatacccaaacccgtcggggacggggatgagatttaatttctcattcccgttgg 12341525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 13705706 - 13705775
Alignment:
Q  39 acggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    ||||||| |||||||||||||||||  ||||||||||| | ||   |||  |||||||||||||||||||    
T  13705706 acggggatgagattcaatttctcatccccgttggatatgggtagggtaacggataagtatatgagaatcg 13705775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 13830500 - 13830411
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    ||||||| |||||||| | |||||||| | |||||||||||||||  ||||||| ||| | ||   |||| | |||||||||||||||||    
T  13830500 gatacccgaacccgtcggggacggggatgtgattcaatttctcatccccgttgggtatgggtagggtaataggtaagtatatgagaatcg 13830411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 8916260 - 8916304
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcat 63  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||    
T  8916260 gatacccgaacccgtcggggacggggatgagattcaatttctcat 8916304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000007; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 10126872 - 10126815
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| |||||||||| |||||||||||||||||  | |||||||||    
T  10126872 gatacccaaacccgtcggagacggggatgagattcaatttctcatccctgttggatat 10126815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 42987802 - 42987859
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| |  ||||||| |||||||||||||||||| |||||||||||    
T  42987802 gatacccgaacccgtcgggaacggggatgagattcaatttctcattcccgttggatat 42987859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 12834901 - 12834991
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcga 109  Q
    ||||||| ||||| || | ||||| || |||||||||||||||||   |||||| ||| ||||  ||||  ||||||||||||||||||||    
T  12834901 gatacccgaacccatcggggacggagatgagattcaatttctcatccacgttgggtatggataggataacggataagtatatgagaatcga 12834991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 5909007 - 5909060
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  |||||||    
T  5909007 gatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgg 5909060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 20973810 - 20973867
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| |  ||||||| |||||||||||||||||  |||||||||||    
T  20973810 gatacccgaacccgtcgggtacggggatgagattcaatttctcatccccgttggatat 20973867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 8020311 - 8020263
Alignment:
Q  27 aacccgtcagagacggggaggagattcaatttctcatttccgttggata 75  Q
    |||||||| |||||||||| ||||||  ||||||||| |||||||||||    
T  8020311 aacccgtcggagacggggatgagatttgatttctcatctccgttggata 8020263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 15889975 - 15889931
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcat 63  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||    
T  15889975 gatacccgaacccgtcggggacggggatgagattcaatttctcat 15889931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 17853605 - 17853649
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcat 63  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||    
T  17853605 gatacccgaacccgtcggggacggggatgagattcaatttctcat 17853649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000007; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 23580591 - 23580502
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    ||||||| |||||||| |||||||||| || ||||||||||||||  |||||| |||| | |||  |||  | |||||||||||||||||    
T  23580591 gatacccgaacccgtcggagacggggatgaaattcaatttctcatccccgttgaatataggtaatgtaacaggtaagtatatgagaatcg 23580502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 29842071 - 29841982
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||   |||||| |||   |||| |||  |||||||||||||||||||    
T  29842071 gatacccgaacccgtcggggacggggatgagattcaatttctcatccacgttgggtatgagtaaagtaacggataagtatatgagaatcg 29841982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 52197908 - 52197826
Alignment:
Q  27 aacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcga 109  Q
    |||||||| | |||||||| |||||| |||||||||| ||||||||||||   || | |||  | ||||||||||||||||||    
T  52197908 aacccgtcggggacggggatgagatttaatttctcatctccgttggatataagtagagtaacgggtaagtatatgagaatcga 52197826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 7470102 - 7470155
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  |||||||    
T  7470102 gatacccaaacccgtcggggacggggatgagattcaatttctcatccccgttgg 7470155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 29284099 - 29284010
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    ||||||| |||||||| | |||||||| | |||||||||||||||  ||||||| ||| ||||   |||  | |||||||||||||||||    
T  29284099 gatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttgggtatggatagggtaacgggtaagtatatgagaatcg 29284010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 31127119 - 31127176
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| | |||||||| | | |||||||||||||| |||||||||||    
T  31127119 gatacccgaacccgtcggggacggggatggggttcaatttctcattcccgttggatat 31127176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 34025723 - 34025666
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| | |||||||  |||||||||||||||||  |||||||||||    
T  34025723 gatacccgaacccgtcggggacggggctgagattcaatttctcatccccgttggatat 34025666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 44639031 - 44638986
Alignment:
Q  27 aacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    |||||||| | |||||||| |||||||||||||||||| |||||||    
T  44639031 aacccgtcggggacggggatgagattcaatttctcattcccgttgg 44638986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 34154180 - 34154136
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcat 63  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||    
T  34154180 gatacccgaacccgtcggggacggggatgagattcaatttctcat 34154136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 44107124 - 44107176
Alignment:
Q  20 ataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    |||||| |||||||| | |||||||| |||||||||||||||||  |||||||    
T  44107124 atacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgg 44107176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 16433502 - 16433574
Alignment:
Q  36 gagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    |||||||||| ||| ||||||||||||| |||||||||||| |||||  |||  | |||||||| ||||||||    
T  16433502 gagacggggatgaggttcaatttctcatctccgttggatatggataaggtaacgggtaagtataagagaatcg 16433574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 13390219 - 13390162
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| | |||||||| | |||||||||||||||  |||||||||||    
T  13390219 gatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttggatat 13390162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 17092284 - 17092341
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  | |||||||||    
T  17092284 gatacccgaacccgtcggggacggggatgagattcaatttctcatccctgttggatat 17092341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 19572819 - 19572872
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  |||||||    
T  19572819 gatacccaaacccgtcggggacggggatgagattcaatttctcatccccgttgg 19572872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 20774396 - 20774339
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| | |||||||| | |||||||||||||||  |||||||||||    
T  20774396 gatacccgaacccgtcggggacggggatgggattcaatttctcatccccgttggatat 20774339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 23493649 - 23493706
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||||| |||||||| | |||||||||||||||  |||||| ||||    
T  23493649 gatacccgaacccgtcagggacggggatgggattcaatttctcatccccgttgaatat 23493706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 28297697 - 28297644
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    ||||||| |||||||| | |||||||| | |||||||||||||||| |||||||    
T  28297697 gatacccgaacccgtcggggacggggatgggattcaatttctcattcccgttgg 28297644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 29936181 - 29936124
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| | |||||||| | |||||||||||||||  |||||||||||    
T  29936181 gatacccgaacccgtcggggacggggatgtgattcaatttctcatccccgttggatat 29936124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 24710622 - 24710578
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcat 63  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||    
T  24710622 gatacccgaacccgtcggggacggggatgagattcaatttctcat 24710578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 30685415 - 30685459
Alignment:
Q  27 aacccgtcagagacggggaggagattcaatttctcatttccgttg 71  Q
    ||||||| ||||||||||| | |||||| ||||||||||||||||    
T  30685415 aacccgttagagacggggatgtgattcattttctcatttccgttg 30685459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 34060344 - 34060388
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcat 63  Q
    ||||||| ||||| |||| |||||||| |||||||||||||||||    
T  34060344 gatacccgaacccatcagggacggggatgagattcaatttctcat 34060388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 40087782 - 40087826
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcat 63  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||    
T  40087782 gatacccgaacccgtcggggacggggatgagattcaatttctcat 40087826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 10066 - 9979
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaat 106  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  ||||||  ||| ||||   |||  |||||||||||||||||    
T  10066 gatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgagtatggatagggtaacggataagtatatgagaat 9979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 33159 - 33106
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    ||||||| || ||||| | |||||||| |||||||||||||||||| |||||||    
T  33159 gatacccgaatccgtcggggacggggatgagattcaatttctcattcccgttgg 33106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 2367090 - 2367037
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  |||||||    
T  2367090 gatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgg 2367037  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 5863696 - 5863749
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||  |||||||    
T  5863696 gatacccgaacccgtcggggacggggatgagattcaatttctcatccccgttgg 5863749  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 7394210 - 7394263
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttgg 72  Q
    ||||||| |||||||||||||| |||| ||| |||||||||||||  |||||||    
T  7394210 gatacccgaacccgtcagagacagggatgaggttcaatttctcatccccgttgg 7394263  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 12141161 - 12141072
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    ||||||| |||||||| | ||||| || |||||||||||||||||  ||||||| ||| | || | |||  | |||||||||||||||||    
T  12141161 gatacccaaacccgtcggggacggcgatgagattcaatttctcatccccgttgggtatgggtagagtaacgggtaagtatatgagaatcg 12141072  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 24225464 - 24225407
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    ||||||| |||||||| ||||||| || | |||||||||||||||  |||||||||||    
T  24225464 gatacccgaacccgtcggagacggcgatgtgattcaatttctcatcaccgttggatat 24225407  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 32052812 - 32052763
Alignment:
Q  27 aacccgtcagagacggggaggagattcaatttctcatttccgttggatat 76  Q
    |||||||  |||||||||| |||||||||||||||||  |||||||||||    
T  32052812 aacccgttggagacggggatgagattcaatttctcatccccgttggatat 32052763  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 9442412 - 9442324
Alignment:
Q  20 ataccctaacccgtcagagacggggaggagattcaatttctcatttccgttggatattgataaaataattgataagtatatgagaatcg 108  Q
    |||||| ||||||||   |||||| | |||||||||||||||||  ||||||||||| | |||  |||  | |||||||||||||||||    
T  9442412 atacccgaacccgtcgaggacgggaatgagattcaatttctcatccccgttggatatgggtaaggtaacgggtaagtatatgagaatcg 9442324  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 14254724 - 14254680
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcat 63  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||    
T  14254724 gatacccgaacccgtcggggacggggatgagattcaatttctcat 14254680  T

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Target: scaffold0095 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 32848 - 32892
Alignment:
Q  19 gataccctaacccgtcagagacggggaggagattcaatttctcat 63  Q
    ||||||| |||||||| | |||||||| |||||||||||||||||    
T  32848 gatacccgaacccgtcggggacggggatgagattcaatttctcat 32892  T

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