View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8760_high_12 (Length: 229)
Name: NF8760_high_12
Description: NF8760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8760_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 47123241 - 47123468
Alignment:
| Q |
1 |
tcagaagaaatggttagacttttatgttgttaacgatggatttaaattaaaaaacttattttgttttgtggtttcccttttggtctcttaggaagaggtt |
100 |
Q |
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| T |
47123241 |
tcagaagaaatggttagaattttatgttgttaacgatggatttaaattaaaaaacttattttgttttgtggtttcccttttggtctcttaggaagaggtt |
47123340 |
T |
|
| Q |
101 |
gttttgaagaggtgttggctagctcgatattggaatttatgtgttcgacatggtaacatcatttaattaggttttcaaatatatcaatgtgtattttatg |
200 |
Q |
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| T |
47123341 |
gttttgaagaggtgttggctagctcgatattggaatttatgtgttcgacatggtaagatcatttaattaggttttcaaatataacaatgtgtattttatg |
47123440 |
T |
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| Q |
201 |
attcgtttgtttaaattttgaggaatgt |
228 |
Q |
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||||||||||||||||||||| |||||| |
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| T |
47123441 |
attcgtttgtttaaattttgaagaatgt |
47123468 |
T |
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