View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8761_high_9 (Length: 423)
Name: NF8761_high_9
Description: NF8761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8761_high_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 397; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 19 - 423
Target Start/End: Original strand, 48790694 - 48791098
Alignment:
| Q |
19 |
caaagaagggccgtaatcaggtgtttgcttttacttttataattattattcattgcatataaaacttattttcttatcagcctttataaactaattattg |
118 |
Q |
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| T |
48790694 |
caaagaagggccgtaatcaggtgtttgcttttacttttataattattattcattgtatataaaacttattttcttatcagcctttataaactaattattg |
48790793 |
T |
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| Q |
119 |
agatattctttatttttgtttagcgacgaacatgcatccatgtctaatacttgttcttatgattcaaagttgacagaacaagattcacacaaaaataacc |
218 |
Q |
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| T |
48790794 |
agatattctttatttttgtttagcgacgaacatgcatccatgtctaatacttgttcttatgattcaaagttgacagaacaagattcacacaaaaataacc |
48790893 |
T |
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| Q |
219 |
acgtaatcctaaaatagaagcataactgtaagtcatattatggcttgtttgcacactggtagtttacaatgtagaaaagatggtagagtgacagataaat |
318 |
Q |
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| T |
48790894 |
acgtaatcctaaaatagaagcataactgtaagtcatattatggcttgtttgcacactggtagtttacaatgtagaaaagatggtagagtgacagataaat |
48790993 |
T |
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| Q |
319 |
agacacatgcctagtagaaaatgaacgagaagcagagaattaaataaccacccaatgatcaattgtaggtgaacatgaatggcttttcaattgctggttt |
418 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48790994 |
agacacatacctagtagaaaatgaacgagaagcagagaattaaataaccacccaatgatcaattgtaggtgaacatgaatggcttttcaattgctggttt |
48791093 |
T |
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| Q |
419 |
cacaa |
423 |
Q |
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| T |
48791094 |
cacaa |
48791098 |
T |
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