View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8761_low_20 (Length: 297)
Name: NF8761_low_20
Description: NF8761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8761_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 15 - 283
Target Start/End: Original strand, 34572997 - 34573270
Alignment:
| Q |
15 |
gacatcaagttcaatttcataaagtgcaatcaatgttttacaagtcttatggagaacaactttgctatgtcggaacggtactatgataaaaatctagtgg |
114 |
Q |
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| T |
34572997 |
gacatcaagttcaatttcataaagtgcaatcaatgttttacaagtctgatggagaacaactttgctatgtcggaacggtactatgataaaaatctagtgg |
34573096 |
T |
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| Q |
115 |
ctatggatccattttagatgaatattttgttgagccaacagaagaaaagaaatnnnnnnntcaaaagttgaacgtcaaagacccttaagagatttagata |
214 |
Q |
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| T |
34573097 |
ctatggatccattttagatgaatattttgttgagccaacagaagaaaagaaataaaaaaatcaaaagttgaacgtcaaagacccttaagagatttagata |
34573196 |
T |
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| Q |
215 |
tcatatcattaatcaaaacc-----ttattaggtaaataagccacatcccttatatattcaacatttagttcat |
283 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34573197 |
tcatatcattaatcaaaaccttattttattaggtaaataagccacatcccttatatattcaacatttagttcat |
34573270 |
T |
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