View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8761_low_29 (Length: 237)
Name: NF8761_low_29
Description: NF8761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8761_low_29 |
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Alignment Details
Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 42 - 201
Target Start/End: Original strand, 12199414 - 12199573
Alignment:
| Q |
42 |
caaaatctgaagcattcatcatactttcaaaatcaatcaaattcattataaaacagaactaaacaatgcaagaatcacaaaaaatttaagaatatgtgaa |
141 |
Q |
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| T |
12199414 |
caaaatctgaagcattcatcatactttcaaaatcaatcaaattcattataaaacagaactaaacaatgcaacaatcacaaaaaatttaagaatatgtgaa |
12199513 |
T |
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| Q |
142 |
ccaaattaagaatatgcttcaagaaatcgaaacttaccaagtgaaaatgaacacatcaac |
201 |
Q |
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| T |
12199514 |
ccaaattaagaatatgcttcaagaaatcgaaacttaccaagtgaaaatgaacacatcaac |
12199573 |
T |
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