View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8762_low_5 (Length: 471)

Name: NF8762_low_5
Description: NF8762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8762_low_5
NF8762_low_5
[»] chr8 (46 HSPs)
chr8 (1-452)||(36934601-36935052)
chr8 (330-438)||(24362210-24362316)
chr8 (304-438)||(22651921-22652053)
chr8 (304-438)||(2572038-2572170)
chr8 (330-397)||(34897071-34897136)
chr8 (304-438)||(29510286-29510418)
chr8 (338-427)||(4673441-4673528)
chr8 (338-415)||(24727768-24727845)
chr8 (348-438)||(27101460-27101548)
chr8 (360-438)||(926824-926902)
chr8 (387-428)||(3454474-3454515)
chr8 (339-415)||(13436981-13437055)
chr8 (339-438)||(24857954-24858054)
chr8 (387-438)||(16642029-16642080)
chr8 (338-400)||(20679411-20679471)
chr8 (330-412)||(27213518-27213598)
chr8 (331-397)||(39954288-39954352)
chr8 (330-407)||(12570516-12570591)
chr8 (308-389)||(14634127-14634206)
chr8 (304-397)||(15816111-15816202)
chr8 (338-415)||(22197758-22197833)
chr8 (338-407)||(24669409-24669476)
chr8 (330-391)||(31236585-31236644)
chr8 (346-407)||(41838147-41838206)
chr8 (330-437)||(4786346-4786445)
chr8 (360-425)||(24196633-24196698)
chr8 (338-425)||(31556955-31557039)
chr8 (330-397)||(13844604-13844669)
chr8 (338-424)||(13203600-13203684)
chr8 (332-406)||(29776013-29776085)
chr8 (360-403)||(31109554-31109597)
chr8 (338-407)||(4298902-4298969)
chr8 (312-421)||(11944627-11944734)
chr8 (338-403)||(14134679-14134742)
chr8 (338-407)||(20873045-20873112)
chr8 (338-403)||(36450770-36450833)
chr8 (360-438)||(44067461-44067539)
chr8 (332-384)||(4611533-4611583)
chr8 (321-421)||(11927085-11927183)
chr8 (327-407)||(12570739-12570817)
chr8 (338-438)||(37283826-37283924)
chr8 (327-414)||(11803228-11803313)
chr8 (330-409)||(28385002-28385079)
chr8 (340-391)||(29447128-29447177)
chr8 (338-397)||(30271307-30271364)
chr8 (360-424)||(39820388-39820452)
[»] chr6 (73 HSPs)
chr6 (306-438)||(16766642-16766772)
chr6 (321-438)||(9027123-9027238)
chr6 (338-438)||(1681703-1681801)
chr6 (306-438)||(9107354-9107484)
chr6 (330-438)||(13851681-13851787)
chr6 (338-424)||(9658839-9658922)
chr6 (317-438)||(24115842-24115961)
chr6 (338-438)||(426530-426628)
chr6 (330-438)||(7086740-7086846)
chr6 (338-438)||(7938061-7938159)
chr6 (338-438)||(8776989-8777087)
chr6 (338-438)||(8805588-8805686)
chr6 (331-414)||(1532207-1532290)
chr6 (304-438)||(10294052-10294184)
chr6 (338-422)||(3398580-3398661)
chr6 (330-435)||(5732518-5732621)
chr6 (330-418)||(9629348-9629434)
chr6 (330-394)||(19040341-19040403)
chr6 (330-397)||(7265601-7265666)
chr6 (330-425)||(30866152-30866245)
chr6 (338-424)||(12696284-12696367)
chr6 (338-407)||(16833284-16833351)
chr6 (360-442)||(21395343-21395425)
chr6 (338-415)||(34595102-34595177)
chr6 (304-424)||(8365501-8365619)
chr6 (330-438)||(20371118-20371219)
chr6 (346-399)||(24645464-24645516)
chr6 (360-424)||(6389702-6389766)
chr6 (304-442)||(10339107-10339244)
chr6 (360-424)||(25038107-25038171)
chr6 (348-415)||(3209350-3209415)
chr6 (360-415)||(5000662-5000717)
chr6 (360-407)||(7625098-7625145)
chr6 (304-391)||(8713971-8714057)
chr6 (304-397)||(5970090-5970181)
chr6 (330-438)||(7377930-7378030)
chr6 (338-403)||(17841605-17841668)
chr6 (330-415)||(19044432-19044515)
chr6 (348-424)||(853885-853959)
chr6 (346-421)||(6665177-6665248)
chr6 (338-434)||(7977846-7977940)
chr6 (333-421)||(7996389-7996475)
chr6 (333-421)||(8022326-8022412)
chr6 (332-396)||(13360382-13360444)
chr6 (338-406)||(17341680-17341746)
chr6 (338-438)||(31384865-31384963)
chr6 (338-438)||(34290093-34290191)
chr6 (328-383)||(5462686-5462739)
chr6 (305-380)||(9617437-9617510)
chr6 (330-397)||(10842518-10842583)
chr6 (305-396)||(26562676-26562765)
chr6 (338-425)||(33340401-33340486)
chr6 (312-407)||(34073337-34073430)
chr6 (330-397)||(7027227-7027293)
chr6 (321-383)||(9025493-9025553)
chr6 (332-415)||(11352327-11352410)
chr6 (338-403)||(28152079-28152141)
chr6 (330-392)||(33001297-33001357)
chr6 (360-402)||(677818-677860)
chr6 (321-382)||(7151413-7151472)
chr6 (338-407)||(10770690-10770757)
chr6 (329-438)||(10888981-10889088)
chr6 (311-396)||(15443682-15443765)
chr6 (338-396)||(17302543-17302600)
chr6 (304-405)||(17435177-17435276)
chr6 (368-418)||(19343379-19343429)
chr6 (360-402)||(25096404-25096446)
chr6 (322-383)||(32511666-32511725)
chr6 (360-397)||(7723286-7723323)
chr6 (360-397)||(10760877-10760914)
chr6 (362-407)||(18803549-18803594)
chr6 (360-396)||(17422291-17422327)
chr6 (322-389)||(24614404-24614469)
[»] chr4 (45 HSPs)
chr4 (329-438)||(36635269-36635376)
chr4 (304-438)||(19482613-19482745)
chr4 (338-421)||(28084483-28084565)
chr4 (360-438)||(20633430-20633508)
chr4 (304-397)||(22234872-22234964)
chr4 (346-438)||(23293010-23293100)
chr4 (330-397)||(35723392-35723458)
chr4 (333-426)||(40179647-40179738)
chr4 (360-436)||(847898-847974)
chr4 (338-415)||(21945471-21945546)
chr4 (331-407)||(22440609-22440683)
chr4 (338-403)||(30298926-30298990)
chr4 (338-403)||(30327794-30327858)
chr4 (338-407)||(49431001-49431069)
chr4 (338-437)||(14126127-14126224)
chr4 (322-397)||(15029751-15029824)
chr4 (339-438)||(31603023-31603123)
chr4 (330-392)||(40613441-40613501)
chr4 (338-424)||(752949-753033)
chr4 (346-407)||(11651158-11651217)
chr4 (360-397)||(17345451-17345488)
chr4 (338-438)||(24343452-24343550)
chr4 (322-398)||(36509092-36509169)
chr4 (338-433)||(27706193-27706286)
chr4 (387-438)||(4157103-4157154)
chr4 (360-407)||(5832730-5832777)
chr4 (338-384)||(8423734-8423778)
chr4 (387-438)||(28470342-28470393)
chr4 (338-428)||(35158001-35158089)
chr4 (338-407)||(40481613-40481679)
chr4 (332-397)||(903908-903971)
chr4 (338-407)||(3947782-3947849)
chr4 (339-397)||(12310799-12310857)
chr4 (346-407)||(20521873-20521932)
chr4 (338-407)||(715623-715691)
chr4 (338-397)||(4383354-4383410)
chr4 (360-397)||(5096132-5096169)
chr4 (330-438)||(10499278-10499382)
chr4 (331-403)||(13783261-13783331)
chr4 (304-415)||(5414154-5414263)
chr4 (348-427)||(12895300-12895377)
chr4 (340-391)||(24613719-24613768)
chr4 (304-437)||(30982860-30982988)
chr4 (338-385)||(38148741-38148786)
chr4 (338-409)||(47263960-47264029)
[»] chr1 (70 HSPs)
chr1 (306-439)||(31694694-31694825)
chr1 (338-438)||(398781-398879)
chr1 (306-407)||(5944257-5944358)
chr1 (321-407)||(6427326-6427410)
chr1 (321-438)||(1486708-1486823)
chr1 (321-418)||(20157349-20157444)
chr1 (327-438)||(16927190-16927297)
chr1 (338-438)||(38078677-38078770)
chr1 (303-438)||(6612152-6612285)
chr1 (305-407)||(5376483-5376583)
chr1 (304-438)||(47989443-47989574)
chr1 (330-415)||(7918219-7918302)
chr1 (330-407)||(9709796-9709871)
chr1 (338-403)||(36878441-36878504)
chr1 (338-415)||(13011231-13011307)
chr1 (341-407)||(2896140-2896204)
chr1 (360-438)||(3490426-3490498)
chr1 (333-403)||(5898277-5898345)
chr1 (338-421)||(9033023-9033105)
chr1 (304-406)||(9629882-9629982)
chr1 (338-424)||(10572605-10572689)
chr1 (346-405)||(18471276-18471335)
chr1 (360-438)||(609494-609572)
chr1 (304-397)||(36905983-36906074)
chr1 (360-438)||(41877506-41877584)
chr1 (331-391)||(12443469-12443527)
chr1 (330-414)||(17754280-17754362)
chr1 (331-415)||(19324530-19324612)
chr1 (330-422)||(19562629-19562718)
chr1 (330-438)||(38503265-38503371)
chr1 (338-438)||(42359465-42359563)
chr1 (330-397)||(17831539-17831604)
chr1 (304-379)||(44482234-44482307)
chr1 (338-424)||(5927356-5927440)
chr1 (338-407)||(14359538-14359604)
chr1 (338-424)||(31015002-31015086)
chr1 (365-428)||(48040503-48040566)
chr1 (330-399)||(13997867-13997934)
chr1 (330-415)||(15323131-15323214)
chr1 (330-407)||(23636057-23636132)
chr1 (327-404)||(27471571-27471646)
chr1 (338-407)||(34298412-34298479)
chr1 (338-438)||(16297299-16297397)
chr1 (304-384)||(25361885-25361963)
chr1 (373-438)||(41597519-41597584)
chr1 (338-393)||(113289-113342)
chr1 (330-425)||(1864888-1864979)
chr1 (304-403)||(6414984-6415080)
chr1 (304-391)||(9828036-9828121)
chr1 (330-397)||(39953154-39953219)
chr1 (346-412)||(1262855-1262919)
chr1 (346-424)||(16812502-16812578)
chr1 (360-395)||(21057771-21057806)
chr1 (338-436)||(23531794-23531890)
chr1 (330-384)||(25098563-25098615)
chr1 (360-415)||(40917719-40917774)
chr1 (322-403)||(8842714-8842793)
chr1 (338-403)||(18556472-18556535)
chr1 (330-415)||(38743003-38743086)
chr1 (338-403)||(46348399-46348462)
chr1 (304-394)||(48148019-48148108)
chr1 (338-407)||(48450603-48450670)
chr1 (322-390)||(13436451-13436517)
chr1 (359-438)||(29144393-29144471)
chr1 (304-383)||(34371714-34371790)
chr1 (346-397)||(10475001-10475050)
chr1 (338-405)||(22794094-22794159)
chr1 (338-397)||(22881632-22881689)
chr1 (338-397)||(31672911-31672968)
chr1 (332-383)||(40181871-40181920)
[»] chr2 (49 HSPs)
chr2 (330-437)||(21616708-21616813)
chr2 (347-427)||(11670711-11670789)
chr2 (338-423)||(21624226-21624310)
chr2 (338-420)||(21782834-21782914)
chr2 (338-438)||(18276466-18276564)
chr2 (338-421)||(19536413-19536495)
chr2 (338-424)||(20539690-20539774)
chr2 (330-424)||(23717986-23718077)
chr2 (330-424)||(24105658-24105749)
chr2 (330-403)||(37411252-37411323)
chr2 (332-405)||(10547938-10548011)
chr2 (348-420)||(15349803-15349873)
chr2 (307-415)||(18420419-18420525)
chr2 (338-438)||(28412295-28412393)
chr2 (338-438)||(31283993-31284091)
chr2 (321-405)||(36756343-36756425)
chr2 (360-428)||(4142876-4142944)
chr2 (332-403)||(28677889-28677958)
chr2 (327-438)||(40361759-40361868)
chr2 (322-415)||(896181-896270)
chr2 (338-412)||(12224192-12224266)
chr2 (338-407)||(12940951-12941018)
chr2 (338-403)||(30404866-30404929)
chr2 (338-403)||(37558957-37559020)
chr2 (338-403)||(39323244-39323307)
chr2 (304-438)||(44860273-44860397)
chr2 (362-403)||(6736470-6736511)
chr2 (339-415)||(10535776-10535850)
chr2 (338-438)||(21374715-21374808)
chr2 (338-407)||(29663985-29664053)
chr2 (330-410)||(35449486-35449564)
chr2 (330-397)||(31808063-31808128)
chr2 (328-403)||(4763447-4763521)
chr2 (338-377)||(5040738-5040777)
chr2 (346-397)||(27460012-27460062)
chr2 (360-427)||(31727813-31727880)
chr2 (304-438)||(34784964-34785096)
chr2 (338-403)||(16069270-16069333)
chr2 (338-407)||(23921229-23921296)
chr2 (338-402)||(4882712-4882774)
chr2 (367-424)||(6940214-6940271)
chr2 (338-403)||(14996239-14996303)
chr2 (346-402)||(24894370-24894424)
chr2 (393-438)||(26769462-26769507)
chr2 (360-397)||(29970585-29970622)
chr2 (304-404)||(30717512-30717610)
chr2 (341-424)||(2331753-2331834)
chr2 (338-413)||(15657834-15657907)
chr2 (338-397)||(38117175-38117232)
[»] chr7 (56 HSPs)
chr7 (304-438)||(26329364-26329496)
chr7 (304-428)||(24339597-24339719)
chr7 (304-397)||(32308106-32308197)
chr7 (346-434)||(26733253-26733339)
chr7 (321-424)||(7328690-7328791)
chr7 (316-438)||(22602704-22602824)
chr7 (338-424)||(27945000-27945084)
chr7 (360-438)||(1433399-1433477)
chr7 (360-407)||(5235962-5236009)
chr7 (336-438)||(30730982-30731082)
chr7 (330-407)||(19206026-19206101)
chr7 (330-438)||(17851376-17851482)
chr7 (360-437)||(21141018-21141095)
chr7 (330-402)||(21828413-21828483)
chr7 (330-397)||(42720898-42720963)
chr7 (346-412)||(11722122-11722186)
chr7 (348-421)||(2425759-2425830)
chr7 (348-437)||(11061102-11061189)
chr7 (330-403)||(20549771-20549842)
chr7 (330-407)||(22868018-22868093)
chr7 (346-438)||(5409860-5409950)
chr7 (338-438)||(25481847-25481945)
chr7 (304-407)||(15902798-15902899)
chr7 (360-404)||(22484004-22484048)
chr7 (330-438)||(35861903-35862015)
chr7 (360-420)||(48246849-48246909)
chr7 (348-438)||(29763200-29763288)
chr7 (330-403)||(598188-598259)
chr7 (338-415)||(13557757-13557835)
chr7 (338-424)||(21864765-21864851)
chr7 (361-403)||(25791633-25791675)
chr7 (330-398)||(6630920-6630986)
chr7 (338-390)||(29787385-29787435)
chr7 (311-375)||(35297661-35297723)
chr7 (343-415)||(36297366-36297435)
chr7 (340-424)||(43027487-43027569)
chr7 (332-380)||(22306534-22306581)
chr7 (338-397)||(23191882-23191939)
chr7 (321-407)||(49107797-49107880)
chr7 (360-407)||(4793839-4793886)
chr7 (387-438)||(9778453-9778504)
chr7 (360-403)||(21139029-21139072)
chr7 (360-407)||(24105654-24105701)
chr7 (360-415)||(43249961-43250016)
chr7 (330-403)||(3520350-3520421)
chr7 (360-418)||(4017830-4017888)
chr7 (322-407)||(8090025-8090108)
chr7 (338-407)||(13770667-13770734)
chr7 (338-424)||(32094036-32094121)
chr7 (362-407)||(2034417-2034462)
chr7 (304-393)||(2334238-2334326)
chr7 (330-410)||(3721067-3721144)
chr7 (348-407)||(5307236-5307293)
chr7 (338-405)||(7438684-7438749)
chr7 (330-397)||(9482920-9482985)
chr7 (338-397)||(21560484-21560546)
[»] chr5 (63 HSPs)
chr5 (346-438)||(15382422-15382514)
chr5 (340-434)||(13287417-13287509)
chr5 (304-438)||(21522695-21522827)
chr5 (304-438)||(21533261-21533393)
chr5 (338-438)||(6326313-6326411)
chr5 (338-426)||(21191072-21191158)
chr5 (360-424)||(19820430-19820494)
chr5 (338-437)||(41995417-41995514)
chr5 (341-438)||(6770488-6770583)
chr5 (330-403)||(27144443-27144514)
chr5 (303-424)||(37328825-37328944)
chr5 (365-438)||(36642803-36642875)
chr5 (306-397)||(3966489-3966578)
chr5 (338-424)||(22013373-22013457)
chr5 (330-427)||(16203803-16203898)
chr5 (348-413)||(19552569-19552632)
chr5 (321-397)||(2436908-2436982)
chr5 (338-438)||(17177039-17177137)
chr5 (338-407)||(30135289-30135357)
chr5 (321-403)||(6035463-6035542)
chr5 (338-438)||(26799115-26799214)
chr5 (338-397)||(31084309-31084366)
chr5 (321-400)||(39205863-39205940)
chr5 (338-424)||(6247581-6247665)
chr5 (360-407)||(15410484-15410531)
chr5 (348-438)||(19579646-19579734)
chr5 (327-401)||(38749568-38749640)
chr5 (367-414)||(42488096-42488143)
chr5 (304-397)||(11685925-11686015)
chr5 (338-403)||(14674249-14674312)
chr5 (304-397)||(39698527-39698618)
chr5 (338-403)||(43001780-43001843)
chr5 (304-428)||(21541985-21542107)
chr5 (348-403)||(7175045-7175098)
chr5 (338-397)||(19438329-19438386)
chr5 (339-438)||(26205777-26205874)
chr5 (338-397)||(30098312-30098369)
chr5 (360-424)||(42469180-42469244)
chr5 (321-383)||(6471888-6471948)
chr5 (338-407)||(26716120-26716188)
chr5 (338-407)||(26985860-26985928)
chr5 (338-392)||(28588690-28588742)
chr5 (338-412)||(4105228-4105302)
chr5 (338-403)||(5467994-5468057)
chr5 (338-407)||(27932212-27932278)
chr5 (311-384)||(32766932-32767003)
chr5 (360-394)||(38816731-38816765)
chr5 (360-405)||(5873549-5873594)
chr5 (340-404)||(9449448-9449510)
chr5 (360-397)||(17123034-17123071)
chr5 (330-382)||(30502396-30502446)
chr5 (330-382)||(30542739-30542789)
chr5 (338-391)||(38866445-38866497)
chr5 (360-396)||(2039885-2039921)
chr5 (360-396)||(4206313-4206349)
chr5 (362-398)||(9878070-9878106)
chr5 (360-416)||(17393392-17393448)
chr5 (306-405)||(18592051-18592148)
chr5 (312-415)||(22423802-22423903)
chr5 (338-413)||(24906317-24906390)
chr5 (307-402)||(32444747-32444840)
chr5 (346-405)||(40000559-40000616)
chr5 (308-383)||(41091243-41091316)
[»] chr3 (64 HSPs)
chr3 (340-438)||(16000034-16000130)
chr3 (304-424)||(25064868-25064984)
chr3 (340-438)||(3164043-3164139)
chr3 (304-415)||(14829658-14829766)
chr3 (338-438)||(34307796-34307894)
chr3 (304-438)||(11665889-11666021)
chr3 (321-426)||(4990966-4991069)
chr3 (338-438)||(14747512-14747605)
chr3 (338-438)||(15796310-15796408)
chr3 (338-424)||(8383216-8383300)
chr3 (330-397)||(40993343-40993409)
chr3 (346-407)||(5441055-5441114)
chr3 (338-438)||(21479069-21479161)
chr3 (360-438)||(24205077-24205155)
chr3 (338-415)||(28917969-28918044)
chr3 (338-438)||(35994754-35994851)
chr3 (347-438)||(750643-750733)
chr3 (304-396)||(4987273-4987363)
chr3 (365-438)||(10335327-10335400)
chr3 (330-418)||(25093467-25093553)
chr3 (338-438)||(10219644-10219743)
chr3 (333-404)||(11493372-11493441)
chr3 (330-397)||(41319318-41319383)
chr3 (340-438)||(4469795-4469891)
chr3 (330-384)||(7928449-7928501)
chr3 (321-407)||(9800016-9800100)
chr3 (321-403)||(25948886-25948966)
chr3 (338-391)||(5407263-5407314)
chr3 (307-392)||(8039820-8039903)
chr3 (330-435)||(11658764-11658866)
chr3 (338-407)||(26508086-26508153)
chr3 (338-438)||(10268502-10268600)
chr3 (304-384)||(16192732-16192810)
chr3 (338-399)||(21305229-21305289)
chr3 (330-438)||(38731163-38731269)
chr3 (345-397)||(40052318-40052368)
chr3 (360-396)||(6525716-6525752)
chr3 (338-421)||(8587037-8587118)
chr3 (360-416)||(10504939-10504995)
chr3 (346-397)||(23870583-23870632)
chr3 (304-415)||(41961632-41961741)
chr3 (338-421)||(55401037-55401118)
chr3 (341-407)||(11610497-11610561)
chr3 (360-407)||(14223889-14223936)
chr3 (337-407)||(14979157-14979225)
chr3 (347-397)||(15544679-15544727)
chr3 (321-438)||(10455735-10455850)
chr3 (339-396)||(10954939-10954994)
chr3 (360-418)||(12674537-12674595)
chr3 (338-407)||(14216868-14216935)
chr3 (338-407)||(14222997-14223064)
chr3 (338-403)||(21720744-21720807)
chr3 (338-403)||(22774086-22774149)
chr3 (338-407)||(26492221-26492288)
chr3 (321-426)||(28678260-28678363)
chr3 (338-414)||(3610602-3610676)
chr3 (330-406)||(32804548-32804622)
chr3 (348-407)||(2620079-2620136)
chr3 (330-382)||(7948959-7949010)
chr3 (329-384)||(11313807-11313860)
chr3 (332-391)||(12703999-12704056)
chr3 (304-403)||(14209094-14209190)
chr3 (338-397)||(29112296-29112353)
chr3 (330-397)||(49505162-49505227)
[»] scaffold0053 (1 HSPs)
scaffold0053 (360-438)||(8743-8821)
[»] scaffold0652 (1 HSPs)
scaffold0652 (338-437)||(478-575)
[»] scaffold0027 (1 HSPs)
scaffold0027 (338-438)||(46627-46725)
[»] scaffold0021 (1 HSPs)
scaffold0021 (338-438)||(130427-130525)
[»] scaffold0223 (1 HSPs)
scaffold0223 (338-421)||(20134-20215)
[»] scaffold0020 (1 HSPs)
scaffold0020 (321-422)||(135311-135410)
[»] scaffold0171 (2 HSPs)
scaffold0171 (303-407)||(23486-23589)
scaffold0171 (321-424)||(23380-23480)
[»] scaffold0003 (1 HSPs)
scaffold0003 (304-415)||(241562-241671)
[»] scaffold0019 (1 HSPs)
scaffold0019 (338-397)||(71709-71768)
[»] scaffold0103 (1 HSPs)
scaffold0103 (338-403)||(51791-51854)
[»] scaffold0085 (1 HSPs)
scaffold0085 (346-403)||(26373-26428)
[»] scaffold1528 (1 HSPs)
scaffold1528 (330-414)||(1004-1086)
[»] scaffold0018 (2 HSPs)
scaffold0018 (338-424)||(178834-178919)
scaffold0018 (360-407)||(192285-192332)
[»] scaffold0008 (1 HSPs)
scaffold0008 (304-427)||(263354-263475)
[»] scaffold0004 (1 HSPs)
scaffold0004 (338-397)||(92793-92850)
[»] scaffold0306 (1 HSPs)
scaffold0306 (346-424)||(13359-13435)
[»] scaffold0152 (1 HSPs)
scaffold0152 (346-424)||(21892-21968)
[»] scaffold0007 (1 HSPs)
scaffold0007 (360-415)||(225304-225359)
[»] scaffold0793 (1 HSPs)
scaffold0793 (338-424)||(4899-4983)
[»] scaffold0246 (1 HSPs)
scaffold0246 (338-407)||(19552-19618)
[»] scaffold0044 (1 HSPs)
scaffold0044 (307-393)||(53170-53254)
[»] scaffold0136 (1 HSPs)
scaffold0136 (338-407)||(3865-3932)
[»] scaffold0123 (1 HSPs)
scaffold0123 (330-383)||(44533-44584)
[»] scaffold0022 (1 HSPs)
scaffold0022 (338-407)||(90819-90886)
[»] scaffold0475 (1 HSPs)
scaffold0475 (360-437)||(3262-3339)
[»] scaffold0050 (1 HSPs)
scaffold0050 (338-402)||(70259-70321)
[»] scaffold0279 (1 HSPs)
scaffold0279 (360-424)||(17906-17970)
[»] scaffold0122 (1 HSPs)
scaffold0122 (367-415)||(8634-8682)


Alignment Details
Target: chr8 (Bit Score: 355; Significance: 0; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 452
Target Start/End: Complemental strand, 36935052 - 36934601
Alignment:
Q  1 gttggatttaacatcgaaaacagcagaaacattgtttgaaggagacggtggtagttttgttcnnnnnnnnnnn--ggagacggtggtagttactacgttt 98  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||    
T  36935052 gttggatttaacaccgaaaacagcagaaacattgtttgaaggagacggtggtagttttgttcaaaaaaaataaaaggagacggtggtagttactacgttt 36934953  T
Q  99 ggtcgagttctcaaatgccagtgttagcctcaaccaacgttggtgctggtcgccttgtgcttaagcctcaaggctttgctcttcctcattatgcagattc 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36934952 ggtcgagttctcaaatgccagtgttagcctcaaccaacgttggtgctggtcgccttgtgcttaagcctcaaggctttgctcttcctcattatgcagattc 36934853  T
Q  199 ctctaaagttgcttatgtcattcaaggtcagtcactcccatctgtattgttacgaagcacatacacttcttggattagcctgtcccgttgtctgacacgc 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||    
T  36934852 ctctaaagttgcttatgtcattcaaggtcagtcactcccatctgtattgttaccaagcactgacacttcttggattagcctgtcccgttgtctgacacgc 36934753  T
Q  299 atcgatcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtct 398  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||     
T  36934752 atcgatcgtgtccgatatcgaaacgacgccaacacatataattacaatgaattatgtgattttt--tcgaattattagcggtgtcgacgtgttagtgtcc 36934655  T
Q  399 gtgtcgtgttcggtgtctgtatccgtatccatgcttcatactttagtaacatgt 452  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  36934654 gtgtcgtgtttggtgtttgtatccgtatccatgcttcatactttagtaacatgt 36934601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 330 - 438
Target Start/End: Original strand, 24362210 - 24362316
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| ||||||| |||||||||||||| |  ||||||||||||||||||||| |||||| ||||||||||||| | ||||||| |||||||||||      
T  24362210 acacatataattacactgaattatgtgattct--ctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatctg 24362307  T
Q  430 tgcttcata 438  Q
    |||||||||    
T  24362308 tgcttcata 24362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 22652053 - 22651921
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||| ||| ||||| || |||| |  ||||| | |||||||||||||||||||  ||||||||||| |||||| |||||||||||| |||||    
T  22652053 tcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttc--aaattattagctgtgtcggcgtgtcagtgtccgtgtc 22651956  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||| ||||||| || ||||||||| | |||||||    
T  22651955 gtgtccggtgtcagtgtccgtatccgtacttcata 22651921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 438
Target Start/End: Original strand, 2572038 - 2572170
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||||||||  || ||||| || |||| |  ||||||| | |||||||||||||||||  ||||||||||  ||||||||||||| || || |||||    
T  2572038 tcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttc--aaattattaggtgtgtcgacgtgtcggtatccgtgtc 2572135  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||| | ||||| || |||||||||||||||||||    
T  2572136 gtgtccagtgtccgtgtccgtatccatgcttcata 2572170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 397
Target Start/End: Complemental strand, 34897136 - 34897071
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||| ||||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  34897136 acacatataattacactgaattatgtgatttt--ctcaaattattagcggtgtcgacgtgtctgtgtc 34897071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 438
Target Start/End: Original strand, 29510286 - 29510418
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||| ||| || || || |||| |  ||||| | |||||| ||||||||||||  ||||||||||| |||||| |||||||||||| |||||    
T  29510286 tcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttc--aaattattagctgtgtcggcgtgtcagtgtccgtgtc 29510383  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||| |||||||  | || |||||| |||||||||    
T  29510384 gtgtccggtgtccatgtcagtatccgtgcttcata 29510418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 427
Target Start/End: Original strand, 4673441 - 4673528
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatc 427  Q
    ||||||| |||||| | ||||||||||  ||||||||| | |||||| |||||||||||||||||||||| || |||| |||||||||||    
T  4673441 aattacactgaattttatgattttttc--aaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgtatc 4673528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 415
Target Start/End: Original strand, 24727768 - 24727845
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||| || ||||||| ||||||| ||||||||||||  |||| ||||||||||||| |||||||||||| |||||    
T  24727768 aattacactgcattatgtaattttttttcaaattattagttgtgttgacgtgtcagtgtatgtgtcgtgttcagtgtc 24727845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 438
Target Start/End: Complemental strand, 27101548 - 27101460
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||||||||||||||  |||||||||||||||||| ||||||| ||||  | |||| |||| |||| || || ||||||||||||||||    
T  27101548 aattatgtgattttttc--aaattattagcggtgtcggcgtgtcaatgtccatatcgtattcgatgtcggtgtctgtatccatgcttcata 27101460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 926824 - 926902
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||||||||||||||  |||| | |||||||||||| ||||||||| ||||||| || | ||||||| |||||||||    
T  926824 ttttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcata 926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 428
Target Start/End: Complemental strand, 3454515 - 3454474
Alignment:
Q  387 gtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcc 428  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  3454515 gtgtcagtgtctctgtcgtgttcggtgtctgtatccgtatcc 3454474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 415
Target Start/End: Original strand, 13436981 - 13437055
Alignment:
Q  339 attacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||| ||||||||||||||||||||  ||||||||||| |||||| ||||||||||||  |||| ||| |||||||    
T  13436981 attaccatgaattatgtgattttttc--aaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtc 13437055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 438
Target Start/End: Complemental strand, 24858054 - 24857954
Alignment:
Q  339 attacaatgaattatgtgattttttct-caaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    |||||| |||||||||||||||||| | |||||||||| | |||||| ||||||  |||| ||||||||| ||||||  || ||||||||| | ||||||    
T  24858054 attacactgaattatgtgatttttttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccggtgttcgtgtccgtatccgttcttcat 24857955  T
Q  438 a 438  Q
    |    
T  24857954 a 24857954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 16642029 - 16642080
Alignment:
Q  387 gtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||||||||||||||||||| ||| ||| |||||||||||| |||||||||    
T  16642029 gtgtcagtgtctgtgtcgtgtccggcgtccgtatccgtatccgtgcttcata 16642080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 400
Target Start/End: Original strand, 20679411 - 20679471
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgt 400  Q
    ||||||| |||| |||||||||||  ||||||||||||| ||||||||| |||||||||||||    
T  20679411 aattacactgaactatgtgatttt--ctcaaattattaggggtgtcgacatgtcagtgtctgt 20679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 27213598 - 27213518
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggt 412  Q
    ||||||| ||||||| ||||||||||||||||  || ||||||||||| |||||| |||||| || || ||||||||| ||||    
T  27213598 acacatataattacagtgaattatgtgatttt--ctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccggt 27213518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 39954288 - 39954352
Alignment:
Q  331 cacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||| ||||||| | ||||||||||||||  ||||||||||||||||||||| |||||| |||||    
T  39954288 cacatataattacactaaattatgtgatttt--ctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 407
Target Start/End: Original strand, 12570516 - 12570591
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| ||||||| | |||||||||  ||||||| ||||||||||| ||||| ||||||| |||||||| ||||||    
T  12570516 acacatataattacacttaattatgtg--tttttcttaaattattagcagtgtcaacgtgtcggtgtctgtatcgtgt 12570591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 389
Target Start/End: Original strand, 14634127 - 14634206
Alignment:
Q  308 gtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtg 389  Q
    |||||||||||| ||||| |||||| ||| ||||||| |||||||| | |  |||||| ||||| |||||||||||||||||    
T  14634127 gtccgacatcgacacgacaccaacaaatataattacactgaattatataa--ttttcttaaattgttagcggtgtcgacgtg 14634206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 15816111 - 15816202
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||||||| | | ||||| || |||| || ||||||| | |||||||||||||||  ||||||||||||  |||||| ||||||||||||    
T  15816111 tcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttt--tcaaattattagttgtgtcggcgtgtcagtgtc 15816202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 415
Target Start/End: Original strand, 22197758 - 22197833
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||| | |||||||||| ||||||  ||||||||||| |||| | ||||| |||||||||||||||| |||||||    
T  22197758 aattacactaaattatgtgaatttttc--aaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtc 22197833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 24669476 - 24669409
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||||| ||||   |||||||||||| |||||||  ||||||||||||||||||||||    
T  24669476 aattacactgaattatgtaatttc--ctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgt 24669409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 31236585 - 31236644
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtc 391  Q
    ||||||| ||||||| ||||||||||||  |||||||||||||||||| |||||| ||||||    
T  31236585 acacatataattacattgaattatgtga--ttttctcaaattattagcagtgtcggcgtgtc 31236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 41838147 - 41838206
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||||||||||||||   ||||||||||| ||||||||||||||||||| || ||||||    
T  41838147 tgaattatgtgattttttt--aaattattagctgtgtcgacgtgtcagtgtccgtatcgtgt 41838206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 330 - 437
Target Start/End: Original strand, 4786346 - 4786445
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| ||||||| ||||||||||||  |||||| |||||||||  ||||||| |||||||      ||||||||||||||||| || || ||||||     
T  4786346 acacatataattacactgaattatgtga--ttttcttaaattattaatggtgtcggcgtgtca------gtgtcgtgttcggtgtcagtgtctgtatccg 4786437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 24196633 - 24196698
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgta 425  Q
    |||| ||||||||||||  |||||| |||||| ||||| || |||| |||||||||||||||||||    
T  24196633 ttttttcaaattattagttgtgtcggcgtgtcggtgtccgtatcgtattcggtgtctgtatccgta 24196698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 425
Target Start/End: Complemental strand, 31557039 - 31556955
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgta 425  Q
    ||||||| |||||||||||||||||   |||||||||| | |||||| |||||||||| |  |||| ||| ||||||| |||||||||    
T  31557039 aattacactgaattatgtgattttt---caaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccggtgtccgtatccgta 31556955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 13844604 - 13844669
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||| | ||||||||||||||  |||||||||||||| |||||| |||||| |||||    
T  13844604 acacatataattacactcaattatgtgatttt--ctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 13203684 - 13203600
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| |||||||||| |||||  ||||||||||||| | ||| ||||| ||||||| ||||||||||  ||| || ||||||||    
T  13203684 aattacactgaattatgtaatttt--ctcaaattattagtgttgttgacgtatcagtgtttgtgtcgtgtcgggtatccgtatccgt 13203600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 406
Target Start/End: Complemental strand, 29776085 - 29776013
Alignment:
Q  332 acatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtg 406  Q
    ||||| ||||| | ||||||| ||||||||  |||||||||||||| |||||||| ||||| |||| ||||||||    
T  29776085 acatataattatactgaattacgtgatttt--ctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg 29776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 403
Target Start/End: Original strand, 31109554 - 31109597
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||||||| |||||||| |||||||||||| |||||    
T  31109554 ttttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtc 31109597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 4298902 - 4298969
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| | |||||||||||||||||  ||||||||| | |||||| ||||| ||| ||||||||||||    
T  4298902 aattacattaaattatgtgattttttc--aaattattaactgtgtcggcgtgttagtatctgtgtcgtgt 4298969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 421
Target Start/End: Complemental strand, 11944734 - 11944627
Alignment:
Q  312 gacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcgg 411  Q
    |||||| | ||||| || ||||||| ||||||| ||| |||||||||||| ||  ||||||||| | |||||| ||||| ||  || |||||||||| ||    
T  11944734 gacatcaacacgacaccgacacatataattacactgagttatgtgattttatc--aaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttgg 11944637  T
Q  412 tgtctgtatc 421  Q
    |||| |||||    
T  11944636 tgtccgtatc 11944627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 14134742 - 14134679
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| ||||||||||||||||  |||||||||||||   |||||||||||| ||||| |||||    
T  14134742 aattacactgaattatgtgatttt--ctcaaattattagtattgtcgacgtgtccgtgtcggtgtc 14134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 20873112 - 20873045
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| | |||||||||||||||||  ||||||||| |  ||||| |||||||||||| |||||||||    
T  20873112 aattacactaaattatgtgattttttc--aaattattatctatgtcggcgtgtcagtgtccgtgtcgtgt 20873045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 36450770 - 36450833
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||||| ||||||||||||  ||||||||||  |||||| |||||||||||| |||||    
T  36450770 aattacactgaattctgtgattttttc--aaattattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 44067539 - 44067461
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||||||||||||| | |||||| |||||||||||| |||| ||||  |||||| || || || ||| |||||||||    
T  44067539 ttttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtccgtgtctgtgtccgtgcttcata 44067461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 4611583 - 4611533
Alignment:
Q  332 acatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcg 384  Q
    ||||| ||||||| |||||||||| |||||  |||||||||||||||||||||    
T  4611583 acatataattacactgaattatgttatttt--ctcaaattattagcggtgtcg 4611533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 421
Target Start/End: Original strand, 11927085 - 11927183
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 420  Q
    ||||| || ||||||| ||||||| ||||||||||||  |||| ||||||||||| | |||||| ||| | ||  || |||||||||| |||||| ||||    
T  11927085 acgacaccgacacatataattacactgaattatgtga--ttttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggtgtccgtat 11927182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 12570739 - 12570817
Alignment:
Q  327 ccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||||| ||| ||||||| | ||||||| |  ||||||| ||||||||||||||||| ||||||| |||||| | ||||||    
T  12570739 ccaacatatataattacacttaattatgcg--tttttcttaaattattagcggtgtcaacgtgtcggtgtctatatcgtgt 12570817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 37283826 - 37283924
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| ||||||||||||||||  |||| ||||||||||||| |  | |||||||||| ||||| |||  ||||||  | | ||||||| ||||||||    
T  37283826 aattacactgaattatgtgatttt--ctcagattattagcggtgcccgcatgtcagtgtccgtgtcatgtctggtgtccatgtacgtatccgtgcttcat 37283923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 414
Target Start/End: Complemental strand, 11803313 - 11803228
Alignment:
Q  327 ccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgt 414  Q
    |||||||||| ||||||| ||||||||||||  |||||| ||||||||| | |||||   || |||||||  |||||||||| |||||    
T  11803313 ccaacacatataattacactgaattatgtga--ttttcttaaattattaacagtgtcagtgtatcagtgttcgtgtcgtgtttggtgt 11803228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 28385002 - 28385079
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttc 409  Q
    ||||||| ||||||| ||||||||| ||||| |||  | ||||||| ||||||||   |||||||||| |||||||||||    
T  28385002 acacatataattacactgaattatgagatttattc--atattattaacggtgtcggtatgtcagtgtccgtgtcgtgttc 28385079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 29447128 - 29447177
Alignment:
Q  340 ttacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtc 391  Q
    ||||| ||||||||||||||||  |||||||||||||  |||||||||||||    
T  29447128 ttacattgaattatgtgatttt--ctcaaattattagttgtgtcgacgtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 30271307 - 30271364
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| || ||||||||||||||||  |||| |||||| |||||| ||||||||||||    
T  30271307 aattacactgcattatgtgattttttc--aaatgattagctgtgtcggcgtgtcagtgtc 30271364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 424
Target Start/End: Complemental strand, 39820452 - 39820388
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||||||||||||   | |||  |||||| ||||||||||||||| |||||||||| |||||    
T  39820452 ttttctcaaattattatacgggtcagcgtgtcggtgtctgtgtcgtgtccggtgtctgtgtccgt 39820388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 73)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 306 - 438
Target Start/End: Complemental strand, 16766772 - 16766642
Alignment:
Q  306 gtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 405  Q
    |||||||||| ||| ||||| || |||| |  ||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||||||||  ||||||    
T  16766772 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttc--aaattattagctgtgtcggcgtgtcagtgtccatgtcgt 16766675  T
Q  406 gttcggtgtctgtatccgtatccatgcttcata 438  Q
    || ||||||| || |||||||||||||||||||    
T  16766674 gtccggtgtccgtgtccgtatccatgcttcata 16766642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 321 - 438
Target Start/End: Complemental strand, 9027238 - 9027123
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 420  Q
    ||||| || ||||||| |||||||  ||||||||||||| |  ||||||||||||||||||||| |||||||||||| ||||||||| ||| ||| || |    
T  9027238 acgacaccgacacatataattacacggaattatgtgattat--ctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtgt 9027141  T
Q  421 ccgtatccatgcttcata 438  Q
    |||||||  |||||||||    
T  9027140 ccgtatcggtgcttcata 9027123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 1681801 - 1681703
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| ||||||| |||||||||||  ||||||||||  |||||| ||||| ||||| ||||||||||||||||||||| || |||||| ||||||||    
T  1681801 aattacactgaattacgtgattttttc--aaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtctgtgtctgtatccgtgcttcat 1681704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 306 - 438
Target Start/End: Original strand, 9107354 - 9107484
Alignment:
Q  306 gtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 405  Q
    |||||||||| ||| ||||| || |||| |  ||||||| |||||| ||||||||||||  ||||||||||| |||||| ||||| |||||| |||||||    
T  9107354 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttc--aaattattagctgtgtcggcgtgttagtgtccgtgtcgt 9107451  T
Q  406 gttcggtgtctgtatccgtatccatgcttcata 438  Q
    || ||||||| || || |||||| |||||||||    
T  9107452 gtccggtgtccgtgtcagtatccgtgcttcata 9107484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 438
Target Start/End: Complemental strand, 13851787 - 13851681
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| ||||||| ||||||| || |||||  |||||||||||||||||||||||||||||||||| |||||||||||  |||| || |||| | ||     
T  13851787 acacatataattacactgaattacgttatttt--ctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgttcaatgtccgtgtccgaacccg 13851690  T
Q  430 tgcttcata 438  Q
    |||||||||    
T  13851689 tgcttcata 13851681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 9658922 - 9658839
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| ||||||||||||||||  || |||||||||||||||||| |||||||||||| |||||||| || ||||||||||||||    
T  9658922 aattacactgaattatgtgatttt--cttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtg-tctgtgtctgtatccgt 9658839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 438
Target Start/End: Original strand, 24115842 - 24115961
Alignment:
Q  317 cgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtct 416  Q
    ||||||||| |||||| ||| ||||| | ||||||||||||||||||   ||||||||||  |||||  |||||||||| || |||||||||||||||||    
T  24115842 cgaaacgacaccaacatatataattatattgaattatgtgattttttg--aaattattagttgtgtcagcgtgtcagtgcctatgtcgtgttcggtgtct 24115939  T
Q  417 gtatccgtatccatgcttcata 438  Q
    || || |||||| | |||||||    
T  24115940 gtgtctgtatccgtacttcata 24115961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 426530 - 426628
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| | |||||||||||||||||  ||||||||| | |||||| |||||||||||| ||||||||| |||| || || || |||||||||||||||    
T  426530 aattacatttaattatgtgattttttc--aaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtctgtatccatgcttcat 426627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 330 - 438
Target Start/End: Complemental strand, 7086846 - 7086740
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| ||||||| | ||||||||||||||  |||||||||||||| ||| ||||||||| |||||||||||||||  ||| | ||| |  |||||||    
T  7086846 acacatataattacactaaattatgtgatttt--ctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtatttgtgtttgtatcca 7086749  T
Q  430 tgcttcata 438  Q
    |||||||||    
T  7086748 tgcttcata 7086740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 7938159 - 7938061
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| | |||||| ||||||||||  ||||||||||| |||||| ||||||||||||  |||||||| ||||||| || ||||||||| ||||||||    
T  7938159 aattacactaaattatatgattttttc--aaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 7938062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 8776989 - 8777087
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||| ||||||||||||  ||||||||||  |||||| |||||||||||| ||||||||| || |||| || ||||||||| ||||||||    
T  8776989 aattacactgaattttgtgattttttc--aaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccgtgcttcat 8777086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 8805588 - 8805686
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| | ||||||||||||||  |||||||||||||| ||| ||||||||| |||||||||||||||  ||||| ||| |  |||||||||||||||    
T  8805588 aattacactaaattatgtgatttt--ctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtgtttgtgtatgtatccatgcttcat 8805685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 414
Target Start/End: Complemental strand, 1532290 - 1532207
Alignment:
Q  331 cacatacaattacaatgaattatgtgattttttctcaaattattagcggtgt--cgacgtgtcagtgtctgtgtcgtgttcggtgt 414  Q
    |||||| ||||||| |||||||||| ||||| ||  ||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  1532290 cacatataattacactgaattatgtaattttatc--aaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgtgttcggtgt 1532207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 10294184 - 10294052
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||| | | ||||| || ||||||| ||||||| |||| |||| |||| |  ||||||||||||||||| ||| | ||||||| || |||||    
T  10294184 tcgtgtccgacaccaacacgacaccgacacatataattacattgaaatatgcgattat--ctcaaattattagcggtatcggcatgtcagtatccgtgtc 10294087  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||| ||||||  || ||||||||| |||||||||    
T  10294086 gtgtccggtgttcgtgtccgtatccgtgcttcata 10294052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 3398661 - 3398580
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatcc 422  Q
    ||||||| |||||||| ||||||||   |||||||||||| |||||| |||||||||||| |||||||||||| |||| ||||||    
T  3398661 aattacactgaattatatgattttt---caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatcc 3398580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 435
Target Start/End: Original strand, 5732518 - 5732621
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| ||||||| | || |||||||||||  |||||||||||| |||||||| ||||||||||||  |||||||| | ||||| || || |||||||    
T  5732518 acacatataattacactaaaatatgtgatttt--ctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgtgtctgtatcca 5732615  T
Q  430 tgcttc 435  Q
    ||||||    
T  5732616 tgcttc 5732621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 418
Target Start/End: Complemental strand, 9629434 - 9629348
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgt 418  Q
    ||||||| ||||||| ||||||||||||||||  ||||||||||| ||||||||| ||||||| | || ||||||||| | ||||||||    
T  9629434 acacatataattacattgaattatgtgatttt--ctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtccagtgtctgt 9629348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 19040403 - 19040341
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagt 394  Q
    ||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  19040403 acacatataattacactgaattatgtgatttt--ctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 7265601 - 7265666
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||| ||||||||||||||||  ||||||||||||||||||| | ||||||||||||    
T  7265601 acacatataattacactgaattatgtgatttt--ctcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 425
Target Start/End: Original strand, 30866152 - 30866245
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgta 425  Q
    ||||||| ||||||| ||||||||||||||||  ||||||||||||||||||| |  ||||| ||||| ||||| ||| ||||||| |||| ||||    
T  30866152 acacatataattacattgaattatgtgatttt--ctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgta 30866245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 12696367 - 12696284
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| |||||||||| ||||||||  ||||||||||| |||||| |||||||||||| |||||||| || ||||| ||||||||    
T  12696367 aattacactgaattatgtaattttttc--aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg-tccgtgtccgtatccgt 12696284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 16833351 - 16833284
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||| ||||||||||||||  ||||||||||  |||||| ||||||||||||||||||||||    
T  16833351 aattacactgaagtatgtgattttttc--aaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 16833284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 442
Target Start/End: Original strand, 21395343 - 21395425
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcatacttt 442  Q
    ||||||||||||||||||||||| | |||||| |||||  |||| | | |||||||||| || |||||| |||||||||||||    
T  21395343 ttttctcaaattattagcggtgttggcgtgtcggtgtccatgtcatatccggtgtctgtgtctgtatccgtgcttcatacttt 21395425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 415
Target Start/End: Complemental strand, 34595177 - 34595102
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||| |||||||||||||||||||  ||||||||||  |||||| ||||||| |||| ||||||||| |||||||    
T  34595177 aattacactgaattatgtgattttttc--aaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtc 34595102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 424
Target Start/End: Original strand, 8365501 - 8365619
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||| | ||| ||||| || |||| |  |||||||  |||||||||||| |||||  ||||||||||  |||||| |||||||||||| |||||    
T  8365501 tcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttc--aaattattagttgtgtcggcgtgtcagtgtccgtgtc 8365598  T
Q  404 gtgttcggtgtctgtatccgt 424  Q
    ||||  |||||| ||||||||    
T  8365599 gtgtctggtgtccgtatccgt 8365619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 438
Target Start/End: Original strand, 20371118 - 20371219
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| ||| ||| ||| ||||||||||||  ||||||||||||||||||||| ||||||| ||||     ||||| |||| ||||| |||||||||     
T  20371118 acacatataatcacattgagttatgtgatttt--ctcaaattattagcggtgtcggcgtgtcaatgtc-----cgtgtccggtttctgtgtccgtatccg 20371210  T
Q  430 tgcttcata 438  Q
    |||||||||    
T  20371211 tgcttcata 20371219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 24645516 - 24645464
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctg 399  Q
    |||||||||||||||||| ||||||||||||| |||||||| ||||||||||||    
T  24645516 tgaattatgtgatttttt-tcaaattattagctgtgtcgacatgtcagtgtctg 24645464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 424
Target Start/End: Complemental strand, 6389766 - 6389702
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    |||||||||||||||| | |||||| ||||| |||||| ||||||||| |||||||||| |||||    
T  6389766 ttttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgt 6389702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 442
Target Start/End: Original strand, 10339107 - 10339244
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaatta-caatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 402  Q
    |||||||||||| ||| ||| | |  ||||||| ||||| || ||||||||||||||||  ||||||||| | ||||||||| |||||||||||   |||    
T  10339107 tcgtgtccgacaccgacacggcactgacacatataattaacactgaattatgtgatttt--ctcaaattaatcgcggtgtcggcgtgtcagtgttcatgt 10339204  T
Q  403 cgtgttcggtgtctgtatccgtatccatgcttcatacttt 442  Q
    ||||| | |||||  | || |||||| |||||||||||||    
T  10339205 cgtgtcctgtgtccatgtctgtatccgtgcttcatacttt 10339244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 424
Target Start/End: Original strand, 25038107 - 25038171
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    |||||||||||||||| ||||||| |||||||||| |||||||||| |||  |||| ||||||||    
T  25038107 ttttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgtattcaatgtccgtatccgt 25038171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 415
Target Start/End: Complemental strand, 3209415 - 3209350
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    |||||||||||||||| ||||||||||||| |||||| |||||| ||||| ||||||||| |||||||    
T  3209415 aattatgtgatttttt-tcaaattattagctgtgtcggcgtgtctgtgtc-gtgtcgtgtccggtgtc 3209350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 415
Target Start/End: Original strand, 5000662 - 5000717
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||| ||||||||||||||||||||||||||| || ||||| ||| |||||||    
T  5000662 ttttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtc 5000717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 407
Target Start/End: Complemental strand, 7625145 - 7625098
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||||||||||||||| | ||||||||||||| |||||||||||||||    
T  7625145 ttttctcaaattattatccgtgtcgacgtgtcggtgtctgtgtcgtgt 7625098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 391
Target Start/End: Complemental strand, 8714057 - 8713971
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtc 391  Q
    |||||||||||| ||| ||||| || |||  |  ||||||| |||||||||||||||||| ||||||||||| | |||||||||||||    
T  8714057 tcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttt-tcaaattattaactgtgtcgacgtgtc 8713971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 5970090 - 5970181
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||||||| ||| ||||| || |||  |  ||||||| |||||||||||||||||  ||||||||||| | ||||||||||||| |||||    
T  5970090 tcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttt--tcaaattattaactgtgtcgacgtgtccgtgtc 5970181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 438
Target Start/End: Complemental strand, 7378030 - 7377930
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| ||||||| ||||||||||||  |||||||||||| ||||||||||||        |||||||||| |||| |||||||||  |||||||||     
T  7378030 acacatataattacattgaattatgtga--ttttctcaaatttttagcggtgtcg------gggtgtctgtgttgtgtccggtgtctgggtccgtatccg 7377939  T
Q  430 tgcttcata 438  Q
    |||||||||    
T  7377938 tgcttcata 7377930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 17841605 - 17841668
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| | |||||||||||||||||  ||||||||||| |||||| |||||||||||| |||||    
T  17841605 aattacactaaattatgtgattttttc--aaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 415
Target Start/End: Complemental strand, 19044515 - 19044432
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||| ||| ||| ||||||||||||| ||  |||||||||||||  |||||| ||||||||||||  |||||| |||||||||    
T  19044515 acacatataataacactgaattatgtgatatt--ctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgtattcggtgtc 19044432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 853885 - 853959
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    |||||||||||||||||  ||||||||||  |||||| ||||||||  || ||||||||| ||||||| ||||||||    
T  853885 aattatgtgattttttc--aaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgt 853959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 421
Target Start/End: Complemental strand, 6665248 - 6665177
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 421  Q
    |||||||||||||||   ||||||||||||||||| ||| ||| |  ||||| |||||||||||||||||||||||    
T  6665248 tgaattatgtgattta--ctcaaattattagcggtttcggcgtat--gtgtccgtgtcgtgttcggtgtctgtatc 6665177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 7977846 - 7977940
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgctt 434  Q
    ||||||| |||||||||| ||||||||  ||||||||||| |||||| ||||||||| ||  |||||||| | ||||| || ||| ||||| |||||    
T  7977846 aattacactgaattatgtaattttttc--aaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgtgtccatatccgtgctt 7977940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 421
Target Start/End: Original strand, 7996389 - 7996475
Alignment:
Q  333 catacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 421  Q
    |||| ||||||| |||||||| |||||||  |||||||||||||| |||||| | ||||||||||  |||| ||| | |||||||||||    
T  7996389 catataattacactgaattatatgatttt--ctcaaattattagcagtgtcggcatgtcagtgtccttgtcatgtactgtgtctgtatc 7996475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 421
Target Start/End: Complemental strand, 8022412 - 8022326
Alignment:
Q  333 catacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 421  Q
    |||| ||||||| |||||||| |||||||  |||||||||||||| |||||| | ||||||||||  |||| ||| | |||||||||||    
T  8022412 catataattacactgaattatatgatttt--ctcaaattattagcagtgtcggcatgtcagtgtccttgtcatgtactgtgtctgtatc 8022326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 396
Target Start/End: Original strand, 13360382 - 13360444
Alignment:
Q  332 acatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgt 396  Q
    ||||| ||||||| ||||||||||||||||  ||||||||| ||| |||||||||||||| ||||    
T  13360382 acatataattacactgaattatgtgatttt--ctcaaattactagtggtgtcgacgtgtctgtgt 13360444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 406
Target Start/End: Original strand, 17341680 - 17341746
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtg 406  Q
    ||||||| |||||||||||||||| ||  ||||||||| |||||||| |||||||||| | ||||||||    
T  17341680 aattacactgaattatgtgattttatc--aaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg 17341746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 31384963 - 31384865
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||||||||||  ||||||||||||  || || || || |||| || || || ||||||||||| |||||||||| | ||||||||    
T  31384963 aattacactgaattatgtgattttt--tcaaattattagttgtatcaacatgccagtatccgtatcatgttcggtgtccgtatccgtattcgtgcttcat 31384866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 34290093 - 34290191
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||||||| |  | |||||||||||  |||||| | ||||||||| |||||| | | |||||||||| ||||||||  ||||||||    
T  34290093 aattacactgaattatgtgattct--cgcaaattattagttgtgtcggcatgtcagtgtttgtgtcttatccggtgtctgtgtccgtatctgtgcttcat 34290190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 383
Target Start/End: Complemental strand, 5462739 - 5462686
Alignment:
Q  328 caacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtc 383  Q
    ||||| ||| ||||||||||||||||||||  |||||||||||||||| |||||||    
T  5462739 caacatatataattacaatgaattatgtga--ttttctcaaattattaacggtgtc 5462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 380
Target Start/End: Complemental strand, 9617510 - 9617437
Alignment:
Q  305 cgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggt 380  Q
    ||||||||||| ||  ||||| || ||||||| ||||||| ||||||||||||  |||||||||||||||| ||||    
T  9617510 cgtgtccgacaccgcgacgacaccgacacatataattacattgaattatgtga--ttttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 397
Target Start/End: Complemental strand, 10842583 - 10842518
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||  |||||| | |||||||||||||||||  |||||||||||||||||| |||||| |||||    
T  10842583 acacatatgattacactaaattatgtgattttttc--aaattattagcggtgtcggcgtgtccgtgtc 10842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 396
Target Start/End: Complemental strand, 26562765 - 26562676
Alignment:
Q  305 cgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgt 396  Q
    ||||| ||||| ||| |||||  | ||||||| ||||||| ||||||||||||  |||||||||||| ||||| |||||| |||||| ||||    
T  26562765 cgtgttcgacaccgacacgacatcgacacatataattacactgaattatgtga--ttttctcaaatttttagcagtgtcggcgtgtccgtgt 26562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 425
Target Start/End: Original strand, 33340401 - 33340486
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgta 425  Q
    ||||||| | || |||||||||||||   ||||||| | |||||||| |||||| |||| ||||| |||| |||||||||||||||||    
T  33340401 aattacagtaaaatatgtgattttttt--aaattatcaacggtgtcggcgtgtctgtgtttgtgttgtgtccggtgtctgtatccgta 33340486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 407
Target Start/End: Original strand, 34073337 - 34073430
Alignment:
Q  312 gacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||| ||| ||||| || || |||| ||||||| ||||||||| ||||||  ||||||||||||||| ||| | | |||||||||| |||||||||    
T  34073337 gacaccgacacgacaccgacccatataattacactgaattatgagatttt--ctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgt 34073430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 397
Target Start/End: Complemental strand, 7027293 - 7027227
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||| || ||||||| ||| | ||||||    
T  7027293 acacatataattacactgaattatgtgatttttt-tcaaattatcaggggtgtcggcgtattagtgtc 7027227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 9025493 - 9025553
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtc 383  Q
    ||||| || ||||||| ||||||| ||||||||||||  |||||||||||||||||| |||||    
T  9025493 acgacaccgacacatataattacactgaattatgtga--ttttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 415
Target Start/End: Complemental strand, 11352410 - 11352327
Alignment:
Q  332 acatacaattacaatgaattatgtgattttttctcaaattat--tagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||| |||||||| |||||| ||||||||  ||||| ||||  ||||||||||||| ||| ||| ||||||||||||||| ||||    
T  11352410 acatataattacaaggaattaggtgatttt--ctcaacttatattagcggtgtcgacatgttagtatctgtgtcgtgttcgatgtc 11352327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 28152141 - 28152079
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||||||||||||||||   ||||||||||||  ||||| |||||||||||| |||||    
T  28152141 aattacactgaattatgtgattttt---caaattattagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 33001297 - 33001357
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtca 392  Q
    ||||||| ||||||| | |||||||||||||||  ||||||||||||| |||||| |||||||    
T  33001297 acacatataattacatttaattatgtgattttt--tcaaattattagcagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 402
Target Start/End: Complemental strand, 677860 - 677818
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 402  Q
    |||||||||||||||| | |||||| |||||||||||||||||    
T  677860 ttttctcaaattattaacagtgtcggcgtgtcagtgtctgtgt 677818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 7151472 - 7151413
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgt 382  Q
    ||||| |||||||||| ||||||| | |||||||||||||||  |||||||||||| |||||    
T  7151472 acgacaccaacacatataattacacttaattatgtgattttt--tcaaattattagaggtgt 7151413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 10770690 - 10770757
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||||||||||||  ||||||||||||  |||| | ||||||||||||  ||||||||    
T  10770690 aattacactgaattatgtgattttt--tcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgt 10770757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 438
Target Start/End: Original strand, 10888981 - 10889088
Alignment:
Q  329 aacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcc 428  Q
    |||||||| ||| ||| | |||||||||||||| ||  ||||||||||||||||| | ||||| ||||| ||||| |||| | |||| || || | ||||    
T  10888981 aacacatataatcacactaaattatgtgattttatc--aaattattagcggtgtctatgtgtcggtgtccgtgtcatgtttgatgtccgtgtctgcatcc 10889078  T
Q  429 atgcttcata 438  Q
     |||||||||    
T  10889079 gtgcttcata 10889088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 396
Target Start/End: Complemental strand, 15443765 - 15443682
Alignment:
Q  311 cgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgt 396  Q
    ||||||||| || || |||||| ||| ||||| | |||||||||| |||||  ||||||||||||  | |||||||||||||||||    
T  15443765 cgacatcgacacaacaccaacatatataattatattgaattatgttatttt--ctcaaattattattgatgtcgacgtgtcagtgt 15443682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 17302600 - 17302543
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgt 396  Q
    ||||||| |||||||||||||||||| ||||||||||||  |||||  |||||||||||    
T  17302600 aattacattgaattatgtgatttttt-tcaaattattagttgtgtcagcgtgtcagtgt 17302543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 405
Target Start/End: Complemental strand, 17435276 - 17435177
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||||||| |  || | ||||| |  ||||||| |||||||||| |||||||   |||||||||||  ||||||||| |||||||| |||||    
T  17435276 tcgtgtccgacatcgacaaaacactaacacttgtaattacactgaattatgtaatttttta--aaattattagctatgtcgacgtatcagtgtccgtgtc 17435179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 19343429 - 19343379
Alignment:
Q  368 aattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgt 418  Q
    |||||||| ||||| |||| ||||| |||| ||||||||||||||||||||    
T  19343429 aattattaccggtgacgacatgtcaatgtcagtgtcgtgttcggtgtctgt 19343379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 402
Target Start/End: Complemental strand, 25096446 - 25096404
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 402  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||    
T  25096446 ttttctcaaattattagtggtgtcgtcgtgtcggtgtctgtgt 25096404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 383
Target Start/End: Original strand, 32511666 - 32511725
Alignment:
Q  322 cgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtc 383  Q
    |||| ||||||| || ||||||| ||||||||||||  |||||| |||||||||||||||||    
T  32511666 cgacaccaacacttataattacactgaattatgtga--ttttcttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 7723286 - 7723323
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  7723286 ttttctcaaattattagcagtgtccacgtgtcagtgtc 7723323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 10760877 - 10760914
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||||||||||| | |||||||||||||||||||    
T  10760877 ttttctcaaattattatcagtgtcgacgtgtcagtgtc 10760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 407
Target Start/End: Original strand, 18803549 - 18803594
Alignment:
Q  362 ttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||| ||||||||||||||||| | ||||||||| ||||||||||    
T  18803549 ttctcgaattattagcggtgtcggcatgtcagtgtttgtgtcgtgt 18803594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 17422291 - 17422327
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgt 396  Q
    |||||||||||||||| |||||||||||||| |||||    
T  17422291 ttttctcaaattattatcggtgtcgacgtgttagtgt 17422327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 389
Target Start/End: Complemental strand, 24614469 - 24614404
Alignment:
Q  322 cgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtg 389  Q
    |||| |||||||||||||||||| | |||||| | ||||||  | |||||||||||||| ||||||||    
T  24614469 cgacaccaacacatacaattacactaaattatataattttt--ttaaattattagcggtatcgacgtg 24614404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 8e-25; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 329 - 438
Target Start/End: Complemental strand, 36635376 - 36635269
Alignment:
Q  329 aacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcc 428  Q
    |||||||| ||||||| ||||||||||||||||  ||||||||||||| ||||| | |||||||||||| | ||||||| |||||||||| ||| |||||    
T  36635376 aacacatataattacactgaattatgtgatttt--ctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgtccttatcc 36635279  T
Q  429 atgcttcata 438  Q
    ||||||||||    
T  36635278 atgcttcata 36635269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 19482745 - 19482613
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||| | | ||| ||||| ||||||| |  |||||||  |||||||||||| |||||  ||||||||||  |||||| ||||||||||||||||||    
T  19482745 tcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgatattttc--aaattattagttgtgtcggcgtgtcagtgtctgtgtc 19482648  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||  ||||||||| | ||||||| |||||||||    
T  19482647 gtgtctggtgtctgtgttcgtatccgtgcttcata 19482613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 421
Target Start/End: Complemental strand, 28084565 - 28084483
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 421  Q
    ||||||| |||||||||||||||||| ||||||| ||||| |||||| |||||||| ||||||||||||| ||||||| |||||    
T  28084565 aattacattgaattatgtgatttttt-tcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgtatc 28084483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 20633508 - 20633430
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||| ||||||||||||||||||||||||||||||||| || ||||||  |||||| || ||||||||| |||||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcata 20633430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 22234872 - 22234964
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| |||| ||| ||||| || ||||||| ||||||| |||||||||||||||||| ||||||| |||||||||||| |||||| |||||    
T  22234872 tcgtgtcagacaccgacacgacaccgacacatagaattacactgaattatgtgatttttt-tcaaatttttagcggtgtcggcgtgtccgtgtc 22234964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 346 - 438
Target Start/End: Original strand, 23293010 - 23293100
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||||||||||||||||  ||||||||||| |||||| ||||||| |||| ||||||||| ||||||| || ||||||||  |||||||||    
T  23293010 tgaattatgtgattttttc--aaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatctgtgcttcata 23293100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 35723392 - 35723458
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||||||||    
T  35723392 acacatataattacattgaattatgtg-tattttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 426
Target Start/End: Original strand, 40179647 - 40179738
Alignment:
Q  333 catacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtat 426  Q
    |||| ||||||| |||||||||||||||||||  ||| |||||  |||||| ||||||||||||| ||||| |||||||||||||  |||||||    
T  40179647 catataattacactgaattatgtgattttttc--aaactattaatggtgtcaacgtgtcagtgtccgtgtcatgttcggtgtctgagtccgtat 40179738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 436
Target Start/End: Complemental strand, 847974 - 847898
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttca 436  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||| ||| |||  | ||||||||| |||||||    
T  847974 ttttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtccatgtccgtatccgtgcttca 847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 415
Target Start/End: Complemental strand, 21945546 - 21945471
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||| |||||||||| ||||||||  ||||||||||| |||||| | |||||||||||||||| ||| |||||||    
T  21945546 aattacactgaattatgtcattttttc--aaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtc 21945471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 407
Target Start/End: Original strand, 22440609 - 22440683
Alignment:
Q  331 cacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||||| ||||||| ||||||||||||||||  |||||||||||| ||||||||| || ||||||||  ||||||||    
T  22440609 cacatataattacactgaattatgtgatttt--ctcaaattattaacggtgtcgatgtatcagtgtccatgtcgtgt 22440683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 30298990 - 30298926
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||||||||| ||||||| ||||||||||||| |||||| |||||||||||| |||||    
T  30298990 aattacactgaattatgtcatttttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 30327858 - 30327794
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||||||||| ||||||| ||||||||||||| |||||| |||||||||||| |||||    
T  30327858 aattacactgaattatgtcatttttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 49431069 - 49431001
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||| |||| | |||||||    
T  49431069 aattacactgaattatgtgatttttt-tcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgt 49431001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 14126127 - 14126224
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||||| ||| ||  ||||||||| | |||||| ||||| |||||||||||||||| |  ||||||| || ||||| |||||||||    
T  14126127 aattacactgaattatgtgactttatc--aaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtccactgtctgtgtctgtatctatgcttcat 14126224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 397
Target Start/End: Complemental strand, 15029824 - 15029751
Alignment:
Q  322 cgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||| |||||||||| ||||||| ||||||||||||| |||  ||||||||||||| |||||  ||||||||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattt--tcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 438
Target Start/End: Original strand, 31603023 - 31603123
Alignment:
Q  339 attacaatgaattatgtgattttttct-caaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    |||||| |||||||||||||||||| | ||||||||||| |||||   ||||||||| |  |||||||||||||||||  | || |||||||| ||||||    
T  31603023 attacattgaattatgtgatttttttttcaaattattagtggtgtgagcgtgtcagtattcgtgtcgtgttcggtgtccatgtctgtatccatacttcat 31603122  T
Q  438 a 438  Q
    |    
T  31603123 a 31603123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 40613501 - 40613441
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtca 392  Q
    ||||||| ||||||| ||||||||||||||||  |||||| |||||||||||||| |||||||    
T  40613501 acacatataattacactgaattatgtgatttt--ctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 424
Target Start/End: Original strand, 752949 - 753033
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| |||||||||||||||||| | ||||||||||| ||||||  |||| || || ||||||||| || ||||||||||||||    
T  752949 aattacactgaattatgtgatttttt-ttaaattattagctgtgtcggtgtgttagagtatgtgtcgtg-tccgtgtctgtatccgt 753033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 11651158 - 11651217
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||||||||||||||   ||||||||||| ||||||||||||||||||| || ||||||    
T  11651158 tgaattatgtgattttttt--aaattattagctgtgtcgacgtgtcagtgtccgtatcgtgt 11651217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 17345451 - 17345488
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagtgtc 17345488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 24343550 - 24343452
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||| |||||  |||||||||||| | |||||| |||||| | ||| ||||||||| ||||||| || || || ||| ||||||||    
T  24343550 aattacactgaattatgtaatttt--ctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgcttcat 24343453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 322 - 398
Target Start/End: Original strand, 36509092 - 36509169
Alignment:
Q  322 cgacgccaacacatacaattacaatgaattatgtgattttttct-caaattattagcggtgtcgacgtgtcagtgtct 398  Q
    ||||||| ||||||| ||||||| |  ||||||||||||||| | ||||||||| ||||| ||||| |||||||||||    
T  36509092 cgacgccgacacatataattacacttgattatgtgatttttttttcaaattatttgcggtatcgacatgtcagtgtct 36509169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 433
Target Start/End: Original strand, 27706193 - 27706286
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgct 433  Q
    ||||||| | ||||||||||||||||   |||||||||   |||||||||||||||||||  ||||||||  |||||| || ||||||||| ||||    
T  27706193 aattacactaaattatgtgattttttt--aaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtccgtgtccgtatccgtgct 27706286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 4157154 - 4157103
Alignment:
Q  387 gtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||||||||||||||||||  |||||| || ||||||||| |||||||||    
T  4157154 gtgtcagtgtctgtgtcgtgtctggtgtccgtgtccgtatccgtgcttcata 4157103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 407
Target Start/End: Original strand, 5832730 - 5832777
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||||||||||||||||| |||||||||||| | ||| ||||||||||    
T  5832730 ttttctcaaattattagcagtgtcgacgtgttaatgtttgtgtcgtgt 5832777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 384
Target Start/End: Original strand, 8423734 - 8423778
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcg 384  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||    
T  8423734 aattacactgaattatgtgatttt--ctcaaattattagcggtgtcg 8423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 28470393 - 28470342
Alignment:
Q  387 gtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||||||||||||||| | | ||||||| |||||||||||| |||||||||    
T  28470393 gtgtcagtgtctgtgtcatatccggtgtccgtatccgtatccgtgcttcata 28470342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 428
Target Start/End: Original strand, 35158001 - 35158089
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcc 428  Q
    ||||||| | ||||||||||||||| |  ||||||||||  | |||| |||||||||||| |||| |||| ||||||| || |||||||||    
T  35158001 aattacactaaattatgtgatttttcc--aaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgtgtccgtatcc 35158089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 40481679 - 40481613
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||||||||||||   |||||||||||  || ||| |||||||||||| |||||||||    
T  40481679 aattacactgaattatgtgattttt---caaattattagttgtatcggcgtgtcagtgtcagtgtcgtgt 40481613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 903971 - 903908
Alignment:
Q  332 acatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||| ||||||| ||||||||||||||||  |||||||||||| ||||| ||  |||||||||||    
T  903971 acatataattacactgaattatgtgatttt--ctcaaattattaacggtgccggtgtgtcagtgtc 903908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 3947782 - 3947849
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| ||||||||| |||||||||  ||||||||||| |||||| | |||| |||||||||| ||||    
T  3947782 aattacactgaattatgcgattttttc--aaattattagctgtgtcggcatgtccgtgtctgtgtggtgt 3947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 12310857 - 12310799
Alignment:
Q  339 attacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||| |||||||||  ||||||||||||||||||| || |||||| ||||| |||||    
T  12310857 attacattgaattatgccattttttctcaaattattatcgatgtcgatgtgtctgtgtc 12310799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 20521873 - 20521932
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||||||||||||||| ||  ||||||||| |||| ||| |||||||||||| |||||||||    
T  20521873 tgaattatgtgattttatc--aaattattatcggtatcggcgtgtcagtgtccgtgtcgtgt 20521932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 715623 - 715691
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||||||||||||| | ||||||||||| ||||||  |||| || || ||||||||||    
T  715623 aattacactgaattatgtgatttttt-ttaaattattagctgtgtcggtgtgttagagtatgtgtcgtgt 715691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 4383410 - 4383354
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| |||||||||||||||||   |||||||||||  || ||||||||||||||||    
T  4383410 aattacactgaattatgtgattttt---caaattattagttgtatcgacgtgtcagtgtc 4383354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 5096132 - 5096169
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  5096132 ttttttcaaattattagcggtgtcgacgtgtcaatgtc 5096169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 438
Target Start/End: Original strand, 10499278 - 10499382
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| ||||||| | ||||||||||||||  ||||| || ||||  ||||||  ||||||||||| |||| ||||  |||||| ||||| |||||||    
T  10499278 acacatataattacactaaattatgtgatttt--ctcaagtt-ttagatgtgtcggtgtgtcagtgtcagtgt-gtgtctggtgtccgtatctgtatcca 10499373  T
Q  430 tgcttcata 438  Q
    |||||||||    
T  10499374 tgcttcata 10499382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 403
Target Start/End: Complemental strand, 13783331 - 13783261
Alignment:
Q  331 cacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||| ||||||| |||||| |||||| ||  ||||||| |||||||||||||  ||||||||||| |||||    
T  13783331 cacatataattacactgaattttgtgatctt--ctcaaataattagcggtgtcggtgtgtcagtgtccgtgtc 13783261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 415
Target Start/End: Original strand, 5414154 - 5414263
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||||||||  || ||||| || | ||||| ||||||| || ||| |||||  |||||| |||  |||||| |||||| |||||| ||||| |||||    
T  5414154 tcgtgtccgacactgacacgacaccgatacatataattacactgcattttgtga--ttttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtc 5414251  T
Q  404 gtgttcggtgtc 415  Q
    |||| |||||||    
T  5414252 gtgtccggtgtc 5414263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 12895300 - 12895377
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatc 427  Q
    |||||||||||||||||  |||||||||   |||||| ||||||| |||  ||||||| | ||||||| |||||||||||    
T  12895300 aattatgtgattttttc--aaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccgtatccgtatc 12895377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 24613719 - 24613768
Alignment:
Q  340 ttacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtc 391  Q
    ||||| ||||||||||||||||  |||||||||||||  |||||||||||||    
T  24613719 ttacattgaattatgtgatttt--ctcaaattattagttgtgtcgacgtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 437
Target Start/End: Original strand, 30982860 - 30982988
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||| ||| ||||| || |||| || ||||||| |||| |||||||  ||||||||||| |||||||||   | |||||| ||||| |||||    
T  30982860 tcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtga--ttttctcaaatcattagcggt---ggcgtgtctgtgtccgtgtc 30982954  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    || | |||||||  | | ||||||| ||||||||    
T  30982955 gtatccggtgtccatgttcgtatccgtgcttcat 30982988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 38148741 - 38148786
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcga 385  Q
    ||||||| ||||||||||||||||  |||||| |||||||||||||||    
T  38148741 aattacactgaattatgtgatttt--ctcaaactattagcggtgtcga 38148786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 409
Target Start/End: Complemental strand, 47264029 - 47263960
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttc 409  Q
    |||||||  |||||||||||||||| |  |||||||||||  ||||||||||||| | | ||||||||||||    
T  47264029 aattacacagaattatgtgatttttac--aaattattagctatgtcgacgtgtcaatatttgtgtcgtgttc 47263960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 8e-25; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 306 - 439
Target Start/End: Original strand, 31694694 - 31694825
Alignment:
Q  306 gtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 405  Q
    |||||||||| ||| ||||| || |||| |  ||||| | |||||||||||||||||| |||||||||||||  ||||||||| ||||||||  ||||||    
T  31694694 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgtatcagtgtc--tgtcgt 31694791  T
Q  406 gttcggtgtctgtatccgtatccatgcttcatac 439  Q
    || ||||||| |||||||||||| ||||||||||    
T  31694792 gtccggtgtccgtatccgtatccgtgcttcatac 31694825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 398781 - 398879
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||||| |  ||||||||| ||||||||    
T  398781 aattacactgaattatgtgattttttc--aaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcat 398878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 306 - 407
Target Start/End: Complemental strand, 5944358 - 5944257
Alignment:
Q  306 gtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 405  Q
    ||||||| |||||| ||||| || |||| || ||||||| |||||||||||||||||| ||||||||||||| ||| || ||||||||||||||||||||    
T  5944358 gtgtccgtcatcgacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgt 5944259  T
Q  406 gt 407  Q
    ||    
T  5944258 gt 5944257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 407
Target Start/End: Complemental strand, 6427410 - 6427326
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||| |||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||| | |||||||||||| ||| |||||    
T  6427410 acgacaccaacacatataattacattgaattatgtgatttt--ctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgt 6427326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 438
Target Start/End: Original strand, 1486708 - 1486823
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 420  Q
    ||||| || |||| || ||||||| |||||||||||||||||||  ||||||||||| |||||  ||||||||| || ||||||| | |||| || || |    
T  1486708 acgacaccgacacttataattacactgaattatgtgattttttc--aaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgt 1486805  T
Q  421 ccgtatccatgcttcata 438  Q
    ||||||||||||||||||    
T  1486806 ccgtatccatgcttcata 1486823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 20157349 - 20157444
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgt 418  Q
    ||||| || |||||||  |||||| ||||||||||||||||  |||| ||||||||||||||||| ||||||||| | ||||||||| ||||||||||    
T  20157349 acgacaccgacacatatgattacactgaattatgtgatttt--ctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggtgtctgt 20157444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 438
Target Start/End: Original strand, 16927190 - 16927297
Alignment:
Q  327 ccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtat 426  Q
    |||||| ||| ||||||| |||||||| ||||||||||  |||||||||||  || |||||||||||||||||||||||||| | ||||||| |  ||||    
T  16927190 ccaacatatataattacactgaattatatgattttttc--aaattattagctatgccgacgtgtcagtgtctgtgtcgtgtttgatgtctgtgt--gtat 16927285  T
Q  427 ccatgcttcata 438  Q
    || |||||||||    
T  16927286 ccgtgcttcata 16927297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 38078677 - 38078770
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||     |||||| ||||||| || ||||||||| ||||||||    
T  38078677 aattacattgaattatgtgattttttc--aaattattagctgtgtcgacgtgtcagtgt-----tcgtgtccggtgtccgtgtccgtatccgtgcttcat 38078769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 438
Target Start/End: Original strand, 6612152 - 6612285
Alignment:
Q  303 atcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 402  Q
    ||||||||||||||||| ||||| || |||| |  ||||||| |||||||||| ||||||  ||||||||||| | || ||| ||||||| |||| ||||    
T  6612152 atcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttt--tcaaattattaactgtatcggcgtgtcattgtccgtgt 6612249  T
Q  403 cgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||| ||||||  || ||||||||  |||||||||    
T  6612250 cgtgtccggtgttcgtgtccgtatctgtgcttcata 6612285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 407
Target Start/End: Original strand, 5376483 - 5376583
Alignment:
Q  305 cgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcg 404  Q
    ||||||||||||||| ||||| || |||| |  ||||||| |||||||||| |||||  || |||||||||||||||||| ||||| |||||| ||||||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttatttt--cttaaattattagcggtgtcggcgtgttagtgtccgtgtcg 5376580  T
Q  405 tgt 407  Q
    |||    
T  5376581 tgt 5376583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 47989574 - 47989443
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||| ||| ||||| || |||| |  ||||||| ||||||||||||||||||   |||||||||  | ||||| ||||||||||||||||||    
T  47989574 tcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttt--aaattattattg-tgtcggcgtgtcagtgtctgtgtc 47989478  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||  ||| || || || ||||||||||||||||    
T  47989477 gtgtctggtatccgtgtctgtatccatgcttcata 47989443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 415
Target Start/End: Original strand, 7918219 - 7918302
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||| ||||||| ||||||||||||||||  ||||||||||||| | ||||  ||||||| |||||||||||||| |||||||    
T  7918219 acacatataattacactgaattatgtgatttt--ctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtc 7918302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 407
Target Start/End: Complemental strand, 9709871 - 9709796
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||| |||||||||||||||  ||||||||||||||||||| | | |||||||||| |||||||||    
T  9709871 acacatataattacaacgaattatgtgatttt--ctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgt 9709796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 36878504 - 36878441
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||    
T  36878504 aattacactgaattatgtgatttt--ctcaaattattagcggtgtcggcgtgtcagtgtctatgtc 36878441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 415
Target Start/End: Original strand, 13011231 - 13011307
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||| | |||||||||||||||| ||||||||||||| |||||| | |||||||||  |||||||||||||||||    
T  13011231 aattacacttaattatgtgatttttt-tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgttcggtgtc 13011307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 2896140 - 2896204
Alignment:
Q  341 tacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||| ||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||| ||||    
T  2896140 tacactgaattatgtgatttt--ctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgt 2896204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 3490426 - 3490498
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||||||||||||||| |||||| ||||||||||||      |||| |||||||||||||||||||| |||||||||    
T  3490426 ttttctcaaattattagcagtgtcggcgtgtcagtgtc------gtgtccggtgtctgtatccgtatccgtgcttcata 3490498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 403
Target Start/End: Original strand, 5898277 - 5898345
Alignment:
Q  333 catacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||| ||||||| |||||||||||||||||||  | |||||||||||||||| ||| ||||||||||||||    
T  5898277 catataattacactgaattatgtgattttttc--agattattagcggtgtcggcgtctcagtgtctgtgtc 5898345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 421
Target Start/End: Original strand, 9033023 - 9033105
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 421  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||||| |||  || | | |||||||||||    
T  9033023 aattacactgaattatgtgatttttt-tcaaattattagtggtgttgacgtgtcagtgtccgtgatgtatccagtgtctgtatc 9033105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 406
Target Start/End: Original strand, 9629882 - 9629982
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||||||| ||||| || |||| || ||| ||| |||||||| ||||||| ||  ||||||||||||||||||| ||||| |||||  ||||    
T  9629882 tcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatc--aaattattagcggtgtcgatgtgtcggtgtccatgtc 9629979  T
Q  404 gtg 406  Q
    |||    
T  9629980 gtg 9629982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 424
Target Start/End: Original strand, 10572605 - 10572689
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    |||||||  |||||||||||||||  ||||||||||||| ||||||| |||||||||||   |||||||| ||||||| ||||||||    
T  10572605 aattacaccgaattatgtgatttt--ctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgt 10572689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 405
Target Start/End: Complemental strand, 18471335 - 18471276
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 405  Q
    |||||||||||||||||| ||||||||||||| ||||||||| |||| |||| |||||||    
T  18471335 tgaattatgtgattttttttcaaattattagctgtgtcgacgggtcattgtccgtgtcgt 18471276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 609494 - 609572
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||||||||||||||| ||||||| |||||||||||   |||||||| || ||||||| ||||||| | |||||||||    
T  609494 ttttctcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgtccgatgtctgtgtccgtatacgtgcttcata 609572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 36906074 - 36905983
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||||||||  || || ||||||||||||| ||||||  ||||||||||||  |||||||| |||||||||||||| |  |||||||||||    
T  36906074 tcgtgtccgacactgacacaacgccaacacatataattactctgaattatgtga--ttttctcagattattagcggtgttggtgtgtcagtgtc 36905983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 41877506 - 41877584
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||  ||| ||  | ||||||||| |||||||||    
T  41877506 ttttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtatccatgtccgtatccgtgcttcata 41877584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 12443469 - 12443527
Alignment:
Q  331 cacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtc 391  Q
    |||||||||||||| ||||||||||||  |||||||||||||||||| |||||| ||||||    
T  12443469 cacatacaattacactgaattatgtga--ttttctcaaattattagctgtgtcggcgtgtc 12443527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 414
Target Start/End: Complemental strand, 17754362 - 17754280
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgt 414  Q
    ||||||| | ||||| |||||||||| ||||||||  ||||||||||||||||||  ||||||| ||||||||||| | ||||||    
T  17754362 acacatatagttacactgaattatgtaattttttc--aaattattagcggtgtcggtgtgtcagcgtctgtgtcgtatacggtgt 17754280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 19324612 - 19324530
Alignment:
Q  331 cacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    |||||| ||||||| ||||||||||||||||  |||||||||| ||| |||||||||| |||||| |||||  |||| |||||||    
T  19324612 cacatataattacactgaattatgtgatttt--ctcaaattatcagcagtgtcgacgtatcagtgcctgtgctgtgtccggtgtc 19324530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 19562629 - 19562718
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatcc 422  Q
    ||||||| ||||||| |||| |||| ||||||  |||||||||||||| |||||| |||||||||||  |||| |||| ||||||||||||||    
T  19562629 acacatataattacactgaactatgagatttt--ctcaaattattagcagtgtcggcgtgtcagtgttcgtgt-gtgtccggtgtctgtatcc 19562718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 438
Target Start/End: Complemental strand, 38503371 - 38503265
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| ||||||| |||| ||| |||||||  |||||||||||||||||||||  |||| |||||| ||||| ||| | ||||| || |||||||||     
T  38503371 acacatataattacactgaaatatatgatttt--ctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtgtccgtatccg 38503274  T
Q  430 tgcttcata 438  Q
    ||| |||||    
T  38503273 tgcatcata 38503265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 42359465 - 42359563
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||| ||||||||||||  ||||||||||  |||||  |||||||||||| |||| |||| ||||||  || ||||||||| ||||||||    
T  42359465 aattacactgaattttgtgattttttc--aaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtccgtatccgtgcttcat 42359562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 17831539 - 17831604
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||  |||||| ||||| ||||||||||  ||||||||||||||||||||| ||||||||||||    
T  17831539 acacatatgattacactgaataatgtgatttt--ctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 44482307 - 44482234
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcgg 379  Q
    |||||||||||| ||| ||||| || ||||||| ||||||| ||||||||||||  |||||||||||||| |||||    
T  44482307 tcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtga--ttttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 424
Target Start/End: Original strand, 5927356 - 5927440
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| | |||||| ||||||||||  ||||||||||| ||||   |||||||||||| ||||||||| ||||||| ||||||||    
T  5927356 aattacattaaattatatgattttttc--aaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgt 5927440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 14359538 - 14359604
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| | |||||||||||||||   |||||||||||| |||||| |||||| |||||||||||||||    
T  14359538 aattacactaaattatgtgattttt---caaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgt 14359604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 31015086 - 31015002
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| ||||||||||||||||  |||||||||||||| |||| | || ||||||| | ||||||||  |||||||||| |||||    
T  31015086 aattacactgaattatgtgatttt--ctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgt 31015002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 365 - 428
Target Start/End: Original strand, 48040503 - 48040566
Alignment:
Q  365 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcc 428  Q
    ||||||||||| | |||||| |||||||||||| ||||||||| ||||||| |||||| |||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccatatcc 48040566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 13997934 - 13997867
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctg 399  Q
    ||||||| ||||||| |||||||||||||||||  | |||| |||| |||||||| ||||||||||||||    
T  13997934 acacatataattacactgaattatgtgattttt--ttaaataattaacggtgtcggcgtgtcagtgtctg 13997867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 415
Target Start/End: Complemental strand, 15323214 - 15323131
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    |||| |||||||||| | |||||||||||||||||  ||||||||| | || ||||| ||||||||||  |||||||| |||||||    
T  15323214 acacttacaattacactaaattatgtgattttttc--aaattattaactgtatcgacatgtcagtgtccatgtcgtgtccggtgtc 15323131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 407
Target Start/End: Original strand, 23636057 - 23636132
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||||||||||| |||||||||| |  |||||||||||| || ||||| ||| ||||||| |||| |||||||||    
T  23636057 acacatacaattacactgaattatgtaa--ttttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtcgtgt 23636132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 404
Target Start/End: Original strand, 27471571 - 27471646
Alignment:
Q  327 ccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcg 404  Q
    |||||||||  ||||||| ||||||||||| ||||  ||||||||||||||||| |||  |||||||||| |||||||    
T  27471571 ccaacacatgtaattacactgaattatgtgctttt--ctcaaattattagcggtatcggtgtgtcagtgtttgtgtcg 27471646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 34298479 - 34298412
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| ||||||||||||||||  ||||||||||||| |||||||  |||||||| || |||||||||    
T  34298479 aattacactgaattatgtgatttt--ctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgt 34298412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 16297299 - 16297397
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||| ||||||||||||  | |||||| || |||||||||||||||| || || |||||| || ||||  | ||||||||| ||||||||    
T  16297299 aattacactgaattttgtgattttttc--atattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtccatgtccgtatccgtgcttcat 16297396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 384
Target Start/End: Complemental strand, 25361963 - 25361885
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcg 384  Q
    |||||||||||| ||| ||||| |  ||||||| ||||||| ||||||||||||  |||||||||||||| || |||||||    
T  25361963 tcgtgtccgacaccgacacgacactgacacatataattacactgaattatgtga--ttttctcaaattatcagtggtgtcg 25361885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 373 - 438
Target Start/End: Original strand, 41597519 - 41597584
Alignment:
Q  373 ttagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||| |||| | |||||| ||||| |||||||||| |||||| |||||||||||| |||||||||    
T  41597519 ttagctgtgttggcgtgtcggtgtccgtgtcgtgtttggtgtccgtatccgtatccgtgcttcata 41597584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 113342 - 113289
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcag 393  Q
    ||||||| |||||||||||||||||  ||||||||||||| |||||| ||||||||    
T  113342 aattacactgaattatgtgattttt--tcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 425
Target Start/End: Original strand, 1864888 - 1864979
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgta 425  Q
    ||||||| ||||||| ||||||||||||  |||||||||||||||| | ||||||  || | ||| |||||||||||||  |||||||||||||||    
T  1864888 acacatataattacactgaattatgtga--ttttctcaaattattaactgtgtcggtgtat-agtatctgtgtcgtgtt-tgtgtctgtatccgta 1864979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 403
Target Start/End: Original strand, 6414984 - 6415080
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||||||||  ||| || ||||||  ||||| | || |||||||||||||  ||||||| ||||||| ||||| |||||||||||| |||||    
T  6414984 tcgtgtccgacatcgaat-gacaccgacacatctaattaaactgtattatgtgatttt--ctcaaataattagcgatgtcggcgtgtcagtgtccgtgtc 6415080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 391
Target Start/End: Complemental strand, 9828121 - 9828036
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtc 391  Q
    ||||||| ||||  || ||||| || ||||||| ||||||| ||||||||||||  |||| |||||||||||| ||||||| ||||||    
T  9828121 tcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtga--ttttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 39953154 - 39953219
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||||||||||| | ||||||||||  |||||| |||||||||||||||||| ||| || |||||    
T  39953154 acacatacaattacactaaattatgtga--ttttctaaaattattagcggtgtcggcgtttccgtgtc 39953219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 412
Target Start/End: Complemental strand, 1262919 - 1262855
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggt 412  Q
    ||||||||||||||||  |||||||||||||| |||||| |||||| ||||  ||||||||| ||||    
T  1262919 tgaattatgtgatttt--ctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggt 1262855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 424
Target Start/End: Complemental strand, 16812578 - 16812502
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    |||||||||||||||| ||  |||||||||  |||||||  ||||||||||| ||||| ||||  ||||||||||||||    
T  16812578 tgaattatgtgattttgtc--aaattattattggtgtcggtgtgtcagtgtccgtgtcatgtttagtgtctgtatccgt 16812502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 21057806 - 21057771
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtg 395  Q
    |||||| |||||||||||||||||||||||||||||    
T  21057806 ttttctaaaattattagcggtgtcgacgtgtcagtg 21057771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 23531794 - 23531890
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttca 436  Q
    ||||||| ||||||||||||| |||||  ||||||||||| || | || ||||| ||||| || |||||| | ||||| || ||||||||| |||||||    
T  23531794 aattacattgaattatgtgatattttc--aaattattagcagtattgaagtgtcggtgtccgtatcgtgtccagtgtccgtgtccgtatccgtgcttca 23531890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 384
Target Start/End: Original strand, 25098563 - 25098615
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcg 384  Q
    ||||||| ||||||| ||||||||||||  |||||||||||||| ||||||||||    
T  25098563 acacatataattacactgaattatgtga--ttttctcaaattatcagcggtgtcg 25098615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 415
Target Start/End: Complemental strand, 40917774 - 40917719
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    |||| ||||||||||||| |||||| ||||||||| || ||||||||| |||||||    
T  40917774 ttttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtc 40917719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 8842714 - 8842793
Alignment:
Q  322 cgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||| |||| ||||| ||||||| | |||||| ||  |||||||||||||| ||| |||| || ||||||||||||||||||    
T  8842714 cgacaccaatacatataattacattaaattatatg--tttttctcaaattactagtggtgccggcgtgtcagtgtctgtgtc 8842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 18556472 - 18556535
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| | ||||||||||| |||||  ||||||||||| |||||| |||||||||||| |||||    
T  18556472 aattacattaaattatgtgatattttc--aaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 415
Target Start/End: Original strand, 38743003 - 38743086
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||| ||||| | ||||| |||||| |||||   ||||| |||||||| ||||||||| | ||| ||||||||||||||||||    
T  38743003 acacatataattaaactgaataatgtgactttttt--aaattgttagcggtatcgacgtgttaatgtttgtgtcgtgttcggtgtc 38743086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 46348399 - 46348462
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| | |||||| ||||||||||  ||||||||||| |||||| |||||||||||| |||||    
T  46348399 aattacactaaattatatgattttttc--aaattattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 394
Target Start/End: Original strand, 48148019 - 48148108
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagt 394  Q
    |||||| ||| ||| | ||||| || ||| ||| ||||||| |||||||| ||||||||| | ||||||||||||||||| || |||||||    
T  48148019 tcgtgttcgatatcaacacgacaccgacatatataattacactgaattatatgatttttt-taaaattattagcggtgtcaacatgtcagt 48148108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 48450603 - 48450670
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| | |||||||| ||||||||  ||||||||||| |||| | |||||||||||| |||||||||    
T  48450603 aattacactaaattatgttattttttc--aaattattagctgtgttggcgtgtcagtgtccgtgtcgtgt 48450670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 390
Target Start/End: Complemental strand, 13436517 - 13436451
Alignment:
Q  322 cgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgt 390  Q
    |||| |||||||||| ||||||| ||||||||||||  ||| || ||||||||||| |||||| |||||    
T  13436517 cgacaccaacacatataattacactgaattatgtga--tttccttaaattattagcagtgtcggcgtgt 13436451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 438
Target Start/End: Original strand, 29144393 - 29144471
Alignment:
Q  359 tttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc-gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||| ||||||||||||| |||||| ||| |||||||| ||||| ||||   || ||||| |||||||||||||||||||    
T  29144393 tttttttcaaattattagctgtgtcggcgtatcagtgtcagtgtccgtgtc--gtatctgtgtccgtatccatgcttcata 29144471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 383
Target Start/End: Complemental strand, 34371790 - 34371714
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtc 383  Q
    |||| ||||||| | | ||||| || ||||||| ||||||| |||||||||||||||| ||   ||||||||||||||||    
T  34371790 tcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgattttctc---aattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 10475001 - 10475050
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||||||||||||  ||||| ||||||||||||||| ||||||| ||||    
T  10475001 tgaattatgtgatttt--ctcaagttattagcggtgtcggcgtgtcaatgtc 10475050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 405
Target Start/End: Original strand, 22794094 - 22794159
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 405  Q
    ||||||| || ||||||| ||||||||  ||||||||| | |||| ||||||||||||||| ||||||    
T  22794094 aattacactgtattatgtcattttttc--aaattattatccgtgttgacgtgtcagtgtctatgtcgt 22794159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 22881632 - 22881689
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| | |||||||||||||||||  ||||||||||  |||||| ||||||||||||    
T  22881632 aattacactaaattatgtgattttttc--aaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 31672911 - 31672968
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||| |||||||||||  ||||||||||| ||||||  |||||||||||    
T  31672911 aattacactgaattaagtgattttttc--aaattattagctgtgtcggtgtgtcagtgtc 31672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 383
Target Start/End: Complemental strand, 40181920 - 40181871
Alignment:
Q  332 acatacaattacaatgaattatgtgattttttctcaaattattagcggtgtc 383  Q
    ||||| ||||||| ||||||||||||  |||||||||||||||||| |||||    
T  40181920 acatataattacactgaattatgtga--ttttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 437
Target Start/End: Complemental strand, 21616813 - 21616708
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||| |||||| ||||| |||||||||   |||||||| |||||||||     
T  21616813 acacatataattacactgaattatgtgatttt--ctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccg 21616716  T
Q  430 tgcttcat 437  Q
    ||||||||    
T  21616715 tgcttcat 21616708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 347 - 427
Target Start/End: Complemental strand, 11670789 - 11670711
Alignment:
Q  347 gaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatc 427  Q
    ||||||||||||||||||  |||||||||| || |||||||||||||||||| |||||| ||||||||| |||||||||||    
T  11670789 gaattatgtgattttttc--aaattattagtggcgtcgacgtgtcagtgtctatgtcgtattcggtgtccgtatccgtatc 11670711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 423
Target Start/End: Complemental strand, 21624310 - 21624226
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccg 423  Q
    ||||||| |||||||||  ||||||| | ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||    
T  21624310 aattacactgaattatgctatttttt-taaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccg 21624226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 420
Target Start/End: Original strand, 21782834 - 21782914
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 420  Q
    ||||||| ||||||||||||||||  |||||||||||||| |||||| ||||||||||| |||||||||| | ||||||||||    
T  21782834 aattacactgaattatgtgatttt--ctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtat 21782914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 18276564 - 18276466
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| ||||||| ||||||||  ||||||||||||||||||||| | | ||||||||||| |||||| ||||||| || || |||||| ||||||||    
T  18276564 aattacactgaattaagtgatttt--ctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgtatccgtgcttcat 18276467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 421
Target Start/End: Original strand, 19536413 - 19536495
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 421  Q
    ||||||| |||||||||||||||||| ||||||||||||  |||||| ||||||| |||| ||||||||| ||||||| |||||    
T  19536413 aattacactgaattatgtgatttttt-tcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatc 19536495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 338 - 424
Target Start/End: Original strand, 20539690 - 20539774
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| | |||||| ||||||||||  ||||||||||| ||||||||||||||||||| ||||||||| | ||||| ||||||||    
T  20539690 aattacactaaattatatgattttttc--aaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgt 20539774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 424
Target Start/End: Complemental strand, 23718077 - 23717986
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| ||||||| |||||||||||| |||  |||||||||||||||||||||  ||||||||||| ||||| || || ||||||||||||||    
T  23718077 acacatataattacactgaattatgtgacttt--ctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatg-tccgtgtctgtatccgt 23717986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 424
Target Start/End: Complemental strand, 24105749 - 24105658
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| ||||||| |||||||||||| |||  |||||||||||||||||||||  ||||||||||| ||||| || || ||||||||||||||    
T  24105749 acacatataattacactgaattatgtgacttt--ctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatg-tccgtgtctgtatccgt 24105658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 330 - 403
Target Start/End: Original strand, 37411252 - 37411323
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| ||| ||| ||||||||||||||||  ||||||||||||||||||||| | |||||| |||||||||    
T  37411252 acacatataatcacactgaattatgtgatttt--ctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 10547938 - 10548011
Alignment:
Q  332 acatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 405  Q
    ||||| || |||| |||||||| ||||||||  | ||||||||| ||||||||||||||||||||| |||||||    
T  10547938 acatataactacactgaattatatgatttttatttaaattattaacggtgtcgacgtgtcagtgtccgtgtcgt 10548011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 420
Target Start/End: Complemental strand, 15349873 - 15349803
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 420  Q
    ||||||||||||||||   |||||| || | || ||||||||||| |||||||||||||||||||||||||||    
T  15349873 aattatgtgattttttt--aaattactaacagtatcgacgtgtcattgtctgtgtcgtgttcggtgtctgtat 15349803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 415
Target Start/End: Original strand, 18420419 - 18420525
Alignment:
Q  307 tgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtg 406  Q
    |||||||||| || || || || |||| || |||| || ||||||||||||||||  |||||||||||||| |||| | ||||||||| | ||| |||||    
T  18420419 tgtccgacatggacacaacaccgacacttataattgcattgaattatgtgatttt--ctcaaattattagcagtgttggcgtgtcagtatatgtctcgtg 18420516  T
Q  407 ttcggtgtc 415  Q
    |||||||||    
T  18420517 ttcggtgtc 18420525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 28412393 - 28412295
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||||||||| ||  ||||||||| |||||| ||||||| |||||| |||||||||  |||||| || ||| ||| | ||||||||    
T  28412393 aattacactgaattatgtgattttatc--aaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgtgtccatattcgtgcttcat 28412296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 31284091 - 31283993
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    |||||||||| |||||||||||||  |||||||||||||| |||||| ||||| |||||  ||||  ||| ||||||| || ||||||||  ||||||||    
T  31284091 aattacaatggattatgtgatttt--ctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgtatctgtgcttcat 31283994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 36756343 - 36756425
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 405  Q
    ||||| || |||| || ||||||| |||||||||| |||| |||  ||||||||||  |||||||||||||||||||||||||||    
T  36756343 acgacaccgacacttataattacactgaattatgttatttcttc--aaattattagttgtgtcgacgtgtcagtgtctgtgtcgt 36756425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 428
Target Start/End: Original strand, 4142876 - 4142944
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcc 428  Q
    |||||| ||||| |||| ||||||| |||||||||||| | ||||||||||||||| ||||||| ||||    
T  4142876 ttttcttaaattgttagtggtgtcggcgtgtcagtgtccgggtcgtgttcggtgtccgtatccgaatcc 4142944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 403
Target Start/End: Complemental strand, 28677958 - 28677889
Alignment:
Q  332 acatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||| ||||||| |||||||||||||||||  |||||||||||||||||||| |||  ||||||| |||||    
T  28677958 acatataattacactgaattatgtgattttt--tcaaattattagcggtgtcggcgttccagtgtcagtgtc 28677889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 438
Target Start/End: Original strand, 40361759 - 40361868
Alignment:
Q  327 ccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtat 426  Q
    |||||| ||| ||||||| | |||||||| ||||||||  |||||||||   |||||   ||||| || ||||||||||||||||| || || |||||||    
T  40361759 ccaacagatataattacactaaattatgtaattttttc--aaattattaatagtgtcatagtgtccgtatctgtgtcgtgttcggtatccgtgtccgtat 40361856  T
Q  427 ccatgcttcata 438  Q
    ||||||||||||    
T  40361857 ccatgcttcata 40361868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 896270 - 896181
Alignment:
Q  322 cgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||| |||||||  |||||| |||| |||||||||||  |||||| ||||||| |||||| ||||||||||  |||||||||| |||||||    
T  896270 cgacgccgacacatatgattacattgaaatatgtgatttt--ctcaaactattagcagtgtcggcgtgtcagtg--tgtgtcgtgtccggtgtc 896181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 12224266 - 12224192
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggt 412  Q
    ||||||| || |||||| |||||||| |||||||||||||  ||| | ||||||| ||| |||||||||||||||    
T  12224266 aattacattggattatgggattttttttcaaattattagctatgttggcgtgtcaatgtttgtgtcgtgttcggt 12224192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 12940951 - 12941018
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||| ||||||||||  ||||||||||  ||||| ||||||||||||| |||||||||    
T  12940951 aattacactgaattatatgattttttc--aaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgt 12941018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 30404866 - 30404929
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||||||||||||||||||  ||||||||| | |||||| |||||||||||| |||||    
T  30404866 aattacactgaattatgtgattttttc--aaattattaaccgtgtcggcgtgtcagtgtccgtgtc 30404929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 37559020 - 37558957
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| ||||||||||||||||| |  ||||||||||| |||||| |||||||||||| |||||    
T  37559020 aattacattgaattatgtgatttttac--aaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 39323307 - 39323244
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||||||||| ||||| ||  |||||||||||||||||||||| |||||||| |||||    
T  39323307 aattacactgaattatgtaattttgtc--aaattattagcggtgtcgacgtttcagtgtccgtgtc 39323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 44860397 - 44860273
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||| ||| | | ||||| || ||||||| ||||||| ||||||||| ||||||  ||||||||||||||||        |||||||||| |||||    
T  44860397 tcgtgtccaacaccaacacgacaccgacacatataattacactgaattatgcgatttt--ctcaaattattagcgg--------tgtcagtgtccgtgtc 44860308  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||  |||||  |||||||||||| |||||||||    
T  44860307 gtgtctggtgtacgtatccgtatccgtgcttcata 44860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 403
Target Start/End: Complemental strand, 6736511 - 6736470
Alignment:
Q  362 ttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  6736511 ttctcaaattattaccggtgtcgacgtgtcagtgtctttgtc 6736470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 415
Target Start/End: Original strand, 10535776 - 10535850
Alignment:
Q  339 attacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    |||||| |||||||||| |||||  |||||||||||| |||||||| ||| | ||| |||||||||||| |||||||    
T  10535776 attacactgaattatgtcatttt--ctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgtacggtgtc 10535850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 21374715 - 21374808
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||| ||||||||  ||||||||||| |||||| ||||| ||||||     ||||| ||||||| || ||||||||| ||||||||    
T  21374715 aattacactgaattatgtaattttttc--aaattattagctgtgtcggcgtgttagtgtc-----cgtgtccggtgtccgtgtccgtatccgtgcttcat 21374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 29664053 - 29663985
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||| | || |||| |||||||||||||  ||||||| ||||||||||||||||||||    
T  29664053 aattacactgaattatat-atattttttcaaattattagcactgtcgacatgtcagtgtctgtgtcgtgt 29663985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 330 - 410
Target Start/End: Complemental strand, 35449564 - 35449486
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcg 410  Q
    ||||||| ||||||| |||||| |||||||||  |||||||||||| | |||| | | ||||||||| |||||||||||||    
T  35449564 acacatataattacactgaattctgtgatttt--ctcaaattattaacagtgttggcttgtcagtgtttgtgtcgtgttcg 35449486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 397
Target Start/End: Complemental strand, 31808128 - 31808063
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||| ||||||||||||  |||| | ||||||||||||||||||  |||||||||||    
T  31808128 acacatataattacactgaattatgtga--ttttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 403
Target Start/End: Complemental strand, 4763521 - 4763447
Alignment:
Q  328 caacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||||| ||||| | |||| ||| ||||||||| |||||||||||||| |  ||||||||||||||| |||||    
T  4763521 caacacatataattatattgaactatatgatttttt-tcaaattattagcgataacgacgtgtcagtgtccgtgtc 4763447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 377
Target Start/End: Complemental strand, 5040777 - 5040738
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagc 377  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  5040777 aattacattgaattatgtgattttttttcaaattattagc 5040738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 27460062 - 27460012
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||||| ||||||| ||||||||||||| |||||| ||||||||||||    
T  27460062 tgaattatgtcatttttt-tcaaattattagctgtgtcggcgtgtcagtgtc 27460012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 427
Target Start/End: Complemental strand, 31727880 - 31727813
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatc 427  Q
    |||||||||||||||||  |||||  ||||||||| |||||||| |||||| ||||||| | ||||||    
T  31727880 ttttctcaaattattagtagtgtcagcgtgtcagtatctgtgtcatgttcgatgtctgtgttcgtatc 31727813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 438
Target Start/End: Original strand, 34784964 - 34785096
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||| | ||| ||||| || ||||||| ||||||| | ||||||||||  |||||| |||  |||||  ||||||  ||||||||||| |||||    
T  34784964 tcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtga--ttttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtc 34785061  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||  || ||| || ||||||||  |||||||||    
T  34785062 gtgtctggggtccgtgtccgtatctgtgcttcata 34785096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 16069270 - 16069333
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||||||| |||||||||   ||||||||| |||||||| |||||||||||| |||||    
T  16069270 aattacactgaattatatgattttttt--aaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 23921296 - 23921229
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||||| |||||  |||||||||||| |||| ||||| ||||| ||||||| ||||||    
T  23921296 aattacactgaattatgtaatttt--ctcaaattattaacggtatcgacctgtcaatgtctgtatcgtgt 23921229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 402
Target Start/End: Original strand, 4882712 - 4882774
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 402  Q
    ||||||| |||||||| | ||||||||  |||| ||||||||| ||||||||||||| |||||||    
T  4882712 aattacactgaattatatcattttttc--aaataattagcggtatcgacgtgtcagtatctgtgt 4882774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 6940271 - 6940214
Alignment:
Q  367 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||||||| |||||| |||||||||||| ||||||| || | |||| ||||||||    
T  6940271 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtatttgatgtccgtatccgt 6940214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 14996239 - 14996303
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| | |||||| ||||||||| ||||||||||||| |||||| | |||||||||| |||||    
T  14996239 aattacactaaattatatgatttttt-tcaaattattagctgtgtcggcttgtcagtgtccgtgtc 14996303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 402
Target Start/End: Complemental strand, 24894424 - 24894370
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 402  Q
    ||||||||||||||||||   ||||||||||| |||||| |||||||||||| ||||    
T  24894424 tgaattatgtgattttttt--aaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 438
Target Start/End: Complemental strand, 26769507 - 26769462
Alignment:
Q  393 gtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||||||||||||| ||||||| || ||||||||| |||||||||    
T  26769507 gtgtctgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 26769462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 29970585 - 29970622
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||||||||||||||||||| | |||||||||||    
T  29970585 ttttctcaaattattagcggtgtcaatgtgtcagtgtc 29970622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 30717512 - 30717610
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||| ||| |||||  | |||| |  ||||||| |||||||||||||||||  |||||||||||||  |||||   |||||||||| |||||    
T  30717512 tcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttt--tcaaattattagctttgtcggtttgtcagtgtccgtgtc 30717609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 424
Target Start/End: Complemental strand, 2331834 - 2331753
Alignment:
Q  341 tacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    |||| ||||||||||||||||  ||||||||||||  |||||   ||||||| |||| |||||| ||||| ||||||| |||||    
T  2331834 tacactgaattatgtgatttt--ctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcgcgttcgatgtctgtgtccgt 2331753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 413
Target Start/End: Complemental strand, 15657907 - 15657834
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtg 413  Q
    ||||||| |||||||||||||||||   |||||||||||  | |||| ||||| |||||| ||||||||| |||||    
T  15657907 aattacactgaattatgtgattttt--acaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccggtg 15657834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 38117175 - 38117232
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||  ||| ||||||||||||||  ||||||||||| |||||| ||||||||||||    
T  38117175 aattacaccgaagtatgtgattttttc--aaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 304 - 438
Target Start/End: Original strand, 26329364 - 26329496
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||| ||| |||||||| ||||||| ||||||| |||||| ||||  ||||||||||||||||| || ||||| ||||||||||||||||||    
T  26329364 tcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtg--tttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtc 26329461  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||| | ||||| || || |||| | |||||||||    
T  26329462 gtgtccagtgtccgtgtctgtattcgtgcttcata 26329496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 428
Target Start/End: Complemental strand, 24339719 - 24339597
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||| ||| ||||| || |||| |  ||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||| ||||  ||||    
T  24339719 tcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttc--aaattattagctgtgtcggcgtgtcaatgtccatgtc 24339622  T
Q  404 gtgttcggtgtctgtatccgtatcc 428  Q
    |||| ||||||| ||||||||||||    
T  24339621 gtgtccggtgtccgtatccgtatcc 24339597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 32308197 - 32308106
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||| ||| ||| ||||| |  ||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  32308197 tcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgatttt--ctcaaattattagcggtgtcggcgtgtcagtgtc 32308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 346 - 434
Target Start/End: Complemental strand, 26733339 - 26733253
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgctt 434  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||||||||| |||||||||  |||||| |||||||| ||| |||||    
T  26733339 tgaattatgtgattttgtc--aaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtcggtatccgtttccgtgctt 26733253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 321 - 424
Target Start/End: Original strand, 7328690 - 7328791
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 420  Q
    ||||| || ||||||| ||||||| | |||||||| |||||  |||||||||||||| || ||||||||| | |||||||||||||||||||||| ||||    
T  7328690 acgacaccgacacatataattacactaaattatgttatttt--ctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtat 7328787  T
Q  421 ccgt 424  Q
    ||||    
T  7328788 ccgt 7328791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 438
Target Start/End: Original strand, 22602704 - 22602824
Alignment:
Q  316 tcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    |||| ||||| || ||||||| ||||||| ||||||||||||||||  ||||||| |||  |||||||| |||||||||| |||||||||||| |||| |    
T  22602704 tcgacacgacaccgacacatataattacactgaattatgtgatttt--ctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgttaggtgcc 22602801  T
Q  416 tgtatccgtatccatgcttcata 438  Q
     || ||||||||| | |||||||    
T  22602802 cgtgtccgtatccgtccttcata 22602824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 27945084 - 27945000
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| |||||||||| |||||  ||||||||||||| ||||||| |||||||||||| ||||||||| ||||||| ||||||||    
T  27945084 aattacactgaattatgtaatttt--ctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgt 27945000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 1433477 - 1433399
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||||||||||||| |||||||| ||||||| |||| ||||||||||||||||| ||  |||||||| |||||||||    
T  1433477 ttttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccgtatccgtgcttcata 1433399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 360 - 407
Target Start/End: Complemental strand, 5236009 - 5235962
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  5236009 ttttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 5235962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 336 - 438
Target Start/End: Complemental strand, 30731082 - 30730982
Alignment:
Q  336 acaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttc 435  Q
    ||||||||| ||||||||||||||||  ||||||||||| ||||||||| |||| || ||| ||||||||||  |||||| || ||||||||  ||||||    
T  30731082 acaattacactgaattatgtgatttt--ctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccgtatctgtgcttc 30730985  T
Q  436 ata 438  Q
    |||    
T  30730984 ata 30730982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 407
Target Start/End: Complemental strand, 19206101 - 19206026
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||| |||||  ||||| |||||||||    
T  19206101 acacatataattataatgaattatgtgatttt--ctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgt 19206026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 438
Target Start/End: Complemental strand, 17851482 - 17851376
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| ||||||| ||||||||||||||||  || |||||||||||||| |||| ||||| || ||  |||||||| ||||||| || || ||||||     
T  17851482 acacatataattacactgaattatgtgatttt--ctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgtgtctgtatccg 17851385  T
Q  430 tgcttcata 438  Q
    |||||||||    
T  17851384 tgcttcata 17851376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 21141018 - 21141095
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    |||||| |||||||||| |||||||||||||| | ||| ||||||||| ||||||| || ||||||||| ||||||||    
T  21141018 ttttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtgtccgtatccgtgcttcat 21141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 21828413 - 21828483
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 402  Q
    |||||||||||||||||| |||||||||  ||||||||||||| || |||||||| |||||||||||| ||||    
T  21828413 acacatacaattacaatggattatgtga--ttttctcaaattactaacggtgtcggcgtgtcagtgtccgtgt 21828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 42720898 - 42720963
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||| | |||||||||||||||||  ||||||||||||||||| |||||||||||||    
T  42720898 acacatataattacatttaattatgtgattttttc--aaattattagcggtgtcaacgtgtcagtgtc 42720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 11722122 - 11722186
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggt 412  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||||||| ||||||||| ||||    
T  11722122 tgaattatgtgatttt--ctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggt 11722186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 421
Target Start/End: Original strand, 2425759 - 2425830
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 421  Q
    ||||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||| | |||||||||||    
T  2425759 aattatgtgatttt--ctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtccagtgtctgtatc 2425830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 437
Target Start/End: Original strand, 11061102 - 11061189
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    |||||||||||||||||  ||||||||||| ||||||  ||||||||||| ||||||| | || |||| || ||||||||| ||||||||    
T  11061102 aattatgtgattttttc--aaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgtgtccgtatccgtgcttcat 11061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 20549842 - 20549771
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| ||||||| ||||||| ||||||||  |||||||||||||||||||||  |||||||||| ||||||    
T  20549842 acacatataattacactgaattacgtgatttt--ctcaaattattagcggtgtcggtgtgtcagtgtatgtgtc 20549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 330 - 407
Target Start/End: Complemental strand, 22868093 - 22868018
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| ||||||| ||||||||||||||||  |||| |||||||| ||||||| |||||||||||| |||| ||||    
T  22868093 acacatataattacactgaattatgtgatttt--ctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgt 22868018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 438
Target Start/End: Original strand, 5409860 - 5409950
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||||||||||||||||  ||||||||||| || ||  ||||||||||||  |||||| | |||||||||| || |||||| |||||||||    
T  5409860 tgaattatgtgattttttc--aaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctgtatccgtgcttcata 5409950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 25481945 - 25481847
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||| ||||  ||| |||| || |||| || || |||||| ||||||||    
T  25481945 aattacactgaattatgtgattttttc--aaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccgtgtctgtatccgtgcttcat 25481848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 407
Target Start/End: Complemental strand, 15902899 - 15902798
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||| | ||| || || || ||||||| ||||||| | |||||||||||||| ||  |||||||||  ||||||| | ||||||||||||||||    
T  15902899 tcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatc--aaattattattggtgtcggcatgtcagtgtctgtgtc 15902802  T
Q  404 gtgt 407  Q
    ||||    
T  15902801 gtgt 15902798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 22484048 - 22484004
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcg 404  Q
    |||||| |||||||||||||||||| |||||||||||||||||||    
T  22484048 ttttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtcg 22484004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 438
Target Start/End: Complemental strand, 35862015 - 35861903
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgac------gtgtcagtgtctgtgtcgtgttcggtgtctgtatccg 423  Q
    |||| |||||||||| |||||||||||||||||  ||||||||||||  |||||| |      |||| |||||||||||||||| ||||||| |  ||||    
T  35862015 acacttacaattacattgaattatgtgattttt--tcaaattattagttgtgtcggcgtgttagtgttagtgtctgtgtcgtgtccggtgtccgcgtccg 35861918  T
Q  424 tatccatgcttcata 438  Q
    ||||| |||||||||    
T  35861917 tatccgtgcttcata 35861903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 420
Target Start/End: Original strand, 48246849 - 48246909
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 420  Q
    ||||||||||||| || | |||||||||||||| |||||||||||||||| ||||| ||||    
T  48246849 ttttctcaaattaataacagtgtcgacgtgtcattgtctgtgtcgtgttctgtgtccgtat 48246909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 438
Target Start/End: Original strand, 29763200 - 29763288
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||||||||||||||  ||||||| ||  |||| |  |||||||||||| ||||||||||||||||||| | ||||||| | |||||||    
T  29763200 aattatgtgattttttc--aaattataagttgtgttggtgtgtcagtgtctatgtcgtgttcggtgtctgtgttcgtatccgtacttcata 29763288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 598259 - 598188
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||| |||||||||| | ||||| ||||||||  || ||||||||||||||||||| ||||||||||| |||||    
T  598259 acacttacaattacatttaattacgtgatttt--cttaaattattagcggtgtcgatgtgtcagtgtccgtgtc 598188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 415
Target Start/End: Original strand, 13557757 - 13557835
Alignment:
Q  338 aattacaatgaattatgtgattttttctc-aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||| |||||||||||||||||| |  ||||||||||   ||||| |||||||||||||||||| ||| |||||||    
T  13557757 aattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtgtctgtgtcatgtccggtgtc 13557835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 21864851 - 21864765
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| | |||||| ||||||||| ||||||||||||| |||||   ||||| ||||| ||||||||| || ||| |||||||||    
T  21864851 aattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccgatgtgtgtatccgt 21864765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 403
Target Start/End: Complemental strand, 25791675 - 25791633
Alignment:
Q  361 tttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||| ||||||||||||| ||||||||||||||||||    
T  25791675 tttctcaaataattagcggtgtcggcgtgtcagtgtctgtgtc 25791633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 330 - 398
Target Start/End: Original strand, 6630920 - 6630986
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtct 398  Q
    ||||||| ||||||| ||||||| |||| |||  ||||||||||||| ||||||| |||||||||||||    
T  6630920 acacatataattacactgaattaagtgacttt--ctcaaattattagtggtgtcggcgtgtcagtgtct 6630986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 390
Target Start/End: Original strand, 29787385 - 29787435
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgt 390  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||||| |||||    
T  29787385 aattacactgaattatgtgatttt--ctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 35297661 - 35297723
Alignment:
Q  311 cgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattatta 375  Q
    ||||||| | ||||| |||||||||| ||||| ||||||||||||||  ||||||||||||||||    
T  35297661 cgacatcaacacgacaccaacacatataattataatgaattatgtga--ttttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 415
Target Start/End: Original strand, 36297366 - 36297435
Alignment:
Q  343 caatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    |||||||||||||||  |||||| ||||||||||| ||||||| |||||| |||| ||||||||| |||||||    
T  36297366 caatgaattatgtga--ttttcttaaattattagccgtgtcga-gtgtcaatgtccgtgtcgtgtccggtgtc 36297435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 43027487 - 43027569
Alignment:
Q  340 ttacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||| || ||||||||||||||||  ||||||||||| | |||| |||||||||||| ||||||||| | ||||| | ||||||    
T  43027487 ttacactgcattatgtgattttttc--aaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgt 43027569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 380
Target Start/End: Complemental strand, 22306581 - 22306534
Alignment:
Q  332 acatacaattacaatgaattatgtgattttttctcaaattattagcggt 380  Q
    |||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  22306581 acatacgattacactgaattatgtgatttttt-tcaaattattagcggt 22306534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 23191939 - 23191882
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||| ||| ||||||||    
T  23191939 aattacactgaaatatgtgatttt--ctcaaattattagcggtgtcggcgtatcagtgtc 23191882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 407
Target Start/End: Complemental strand, 49107880 - 49107797
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||| || ||||||| ||| ||| | |||||||||   |||||||||||||||||||||||||  ||||||| ||| |||||||||    
T  49107880 acgacaccgacacatataatcacactcaattatgtg---ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgt 49107797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 407
Target Start/End: Complemental strand, 4793886 - 4793839
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||| |||| |||||||| || ||||||||||||||||||||||||||    
T  4793886 ttttttcaagttattagctgtatcgacgtgtcagtgtctgtgtcgtgt 4793839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 9778504 - 9778453
Alignment:
Q  387 gtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||||||||| ||||||||| ||||||| || ||||||||| |||||||||    
T  9778504 gtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 9778453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 403
Target Start/End: Original strand, 21139029 - 21139072
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||    
T  21139029 ttttctcaaattattaacggtgttgacatgtcagtgtctgtgtc 21139072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 407
Target Start/End: Complemental strand, 24105701 - 24105654
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||| ||||||||||||| |||||| |||||||||||| |||||||||    
T  24105701 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 24105654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 415
Target Start/End: Complemental strand, 43250016 - 43249961
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    |||||||||||||||| | |||||| |||||||||||| ||||| ||| |||||||    
T  43250016 ttttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtc 43249961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 403
Target Start/End: Original strand, 3520350 - 3520421
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| ||||||| |||||||| |||||||  ||||||| |||| |||||||  ||||||| ||||||||||    
T  3520350 acacatataattacattgaattatatgatttt--ctcaaatgattatcggtgtcagcgtgtcaatgtctgtgtc 3520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 418
Target Start/End: Original strand, 4017830 - 4017888
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgt 418  Q
    |||||||||||||||| | |||||| |||||| ||||| ||||||||| | ||||||||    
T  4017830 ttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtccagtgtctgt 4017888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 407
Target Start/End: Original strand, 8090025 - 8090108
Alignment:
Q  322 cgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||| |||||||||||| ||||| ||||||| ||||| ||  ||||||||| ||| ||||||  ||||||| ||| ||||||||||    
T  8090025 cgacaccaacacatacagttacactgaattacgtgatatt--ctcaaattactagtggtgtctgcgtgtcattgtttgtgtcgtgt 8090108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 13770734 - 13770667
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||||| |||||||   ||||||||||| |||||| ||| |||||||| |||||||||    
T  13770734 aattacactgaattatgtaattttttt--aaattattagctgtgtcggcgtatcagtgtccgtgtcgtgt 13770667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 424
Target Start/End: Original strand, 32094036 - 32094121
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| |||||||||||||||||| ||||||||||||  |||| | | ||| ||||| ||||||||||   ||||| ||||||||    
T  32094036 aattacactgaattatgtgatttttt-tcaaattattagttgtgttggcatgttagtgtttgtgtcgtgtcttgtgtccgtatccgt 32094121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 407
Target Start/End: Complemental strand, 2034462 - 2034417
Alignment:
Q  362 ttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||||||||||| ||||||||||||| ||| || |||||||||    
T  2034462 ttctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgt 2034417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 2334326 - 2334238
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcag 393  Q
    |||||||||||| ||| ||||| || |||| |  ||||||| | |||||||||||||||| ||||||||||| |  ||||| ||||||||    
T  2334326 tcgtgtccgaca-cgacacgacaccgacacttgtaattacactaaattatgtgattttttttcaaattattaactttgtcgccgtgtcag 2334238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 410
Target Start/End: Complemental strand, 3721144 - 3721067
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcg 410  Q
    ||||||| ||||| | | ||||||||||||||  ||||||||||||||  ||||||  |||||||||| ||||||||||||    
T  3721144 acacatataattatactaaattatgtgatttt--ctcaaattattagca-tgtcgaaatgtcagtgtccgtgtcgtgttcg 3721067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 407
Target Start/End: Complemental strand, 5307293 - 5307236
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||||||||||  |||||||||| || ||||||| ||||||| ||||||| ||||||    
T  5307293 aattatgtgatttt--ctcaaattataagtggtgtcggcgtgtcaatgtctgtatcgtgt 5307236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 405
Target Start/End: Complemental strand, 7438749 - 7438684
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 405  Q
    ||||||| |||||||||||||||||  ||||||||||| | |||||| | ||||||||| | ||||||    
T  7438749 aattacattgaattatgtgattttt--tcaaattattaactgtgtcggcatgtcagtgtttatgtcgt 7438684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 397
Target Start/End: Complemental strand, 9482985 - 9482920
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||| |||||| |||||||||  |||||||||| |||| |||||  |||||||||||    
T  9482985 acacatataattacactgaattgtgtgatttt--ctcaaattatcagcgatgtcggtgtgtcagtgtc 9482920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 21560546 - 21560484
Alignment:
Q  338 aattacaatgaattatgtgatttttt---ctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||||||||||||||    ||||||||||||| || ||| ||||||||||||    
T  21560546 aattacactgaattatgtgattttttttcttcaaattattagctgtatcggcgtgtcagtgtc 21560484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 438
Target Start/End: Complemental strand, 15382514 - 15382422
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||||| ||||||||| ||||||||||||| |||||| ||||||| |||| ||||||||| ||||||| || ||||||||| |||||||||    
T  15382514 tgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 15382422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 434
Target Start/End: Original strand, 13287417 - 13287509
Alignment:
Q  340 ttacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgctt 434  Q
    ||||| |||||||||||||||||||  ||||||||| | |||||||||||| |||||| ||||||||| ||||||| || ||||||||| |||||    
T  13287417 ttacactgaattatgtgattttttc--aaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgctt 13287509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 21522827 - 21522695
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||| ||| ||||| || |||  |  ||||||| |||||||||| |||||||   ||||||||||| |||||| |||||||||||| |||||    
T  21522827 tcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttatttttta--aaattattagctgtgtcggcgtgtcagtgtccgtgtc 21522730  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||| ||||| | || ||||||||| |||||||||    
T  21522729 gtgtccggtgaccgtgtccgtatccgtgcttcata 21522695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 21533393 - 21533261
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||| ||| ||||| || |||  |  ||||||| |||||||||| |||||||   ||||||||||| |||||| |||||||||||| |||||    
T  21533393 tcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttatttttta--aaattattagctgtgtcggcgtgtcagtgtccgtgtc 21533296  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||| ||||| | || ||||||||| |||||||||    
T  21533295 gtgtccggtgaccgtgtccgtatccgtgcttcata 21533261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 6326313 - 6326411
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||| |||||  ||||||||| ||||| ||||| |||||||||||| ||||||||| |||| || || ||| ||||||||||||||    
T  6326313 aattacactgaattatgtaatttt--ctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtccttatccatgcttcat 6326410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 426
Target Start/End: Original strand, 21191072 - 21191158
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtat 426  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||||| | |||||||||| ||||||||| ||||||| || |||||||    
T  21191072 aattacactgaattatgtgattttttc--aaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtat 21191158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 424
Target Start/End: Original strand, 19820430 - 19820494
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    |||||||||||||||||||||||||  ||||||||||| ||||||||| ||||||| ||||||||    
T  19820430 ttttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgt 19820494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 41995514 - 41995417
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||||||||||||   |||||||||  |||||| |||||||||||||||||||| | | ||||| || ||||||||| ||||||||    
T  41995514 aattacattgaattatgtgattttttcg--aattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 438
Target Start/End: Complemental strand, 6770583 - 6770488
Alignment:
Q  341 tacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||| ||||||||||||||||  || ||||||||||  |||||   ||||||||||| ||||| ||||||||||| |||||||||||| |||||||||    
T  6770583 tacactgaattatgtgatttt--cttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccgtatccgtatccgtgcttcata 6770488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 27144514 - 27144443
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| ||||||| | |||||||||||||   ||||||||||||||||||||| ||||||||||||||||||    
T  27144514 acacatataattacactaaattatgtgatttc--ctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 424
Target Start/End: Original strand, 37328825 - 37328944
Alignment:
Q  303 atcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 402  Q
    ||||||||||||| ||| ||||| || ||||||  ||||||| |||||| ||||||||||   ||||||||| || ||||||  || |||||||| ||||    
T  37328825 atcgtgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgattttt--acaaattatttgctgtgtcggtgtatcagtgtccgtgt 37328922  T
Q  403 cgtgttcggtgtctgtatccgt 424  Q
    ||||||||||||| || |||||    
T  37328923 cgtgttcggtgtccgtgtccgt 37328944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 365 - 438
Target Start/End: Original strand, 36642803 - 36642875
Alignment:
Q  365 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||||||||| | |||||| |||||||||||| ||||||||| |||||||| | |||||||||||||||||||    
T  36642803 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtct-tgtccgtatccatgcttcata 36642875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 306 - 397
Target Start/End: Complemental strand, 3966578 - 3966489
Alignment:
Q  306 gtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||||||  || ||||| || ||||||| ||||||| |||||| |||||||||  ||||||||||||||||||||| | ||||||||||    
T  3966578 gtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgatttt--ctcaaattattagcggtgtcggcatgtcagtgtc 3966489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 22013457 - 22013373
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| | |||||||| |||||| |  ||||||||||| |||||| |||||||||||| ||||||||| ||||||| ||||||||    
T  22013457 aattacactaaattatgtaatttttcc--aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgt 22013373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 330 - 427
Target Start/End: Original strand, 16203803 - 16203898
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatc 427  Q
    ||||||| ||||||| | ||||||| ||||||  |||||||||||||| |||||| | ||| |||||| ||||| |||||||||||||| || |||||    
T  16203803 acacatataattacactaaattatgagatttt--ctcaaattattagcagtgtcggcatgttagtgtccgtgtcatgttcggtgtctgtgtctgtatc 16203898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 413
Target Start/End: Original strand, 19552569 - 19552632
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtg 413  Q
    |||||||||||||||||  ||||||||| | |||||| |||||||||||| |||||||||||||||    
T  19552569 aattatgtgattttttc--aaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcggtg 19552632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 2436982 - 2436908
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||| || ||||||| ||| |||| |||||||||||||||| |  |||||||||||||||||| ||||||||||||    
T  2436982 acgacaccgacacatataatcacaacgaattatgtgatttttgc--aaattattagcggtgtcggcgtgtcagtgtc 2436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 17177039 - 17177137
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    |||||||||||||| | ||||||||||  ||||||||||| |||| | ||| |||||||| | ||||| |  ||||||||| ||||||||| ||||||||    
T  17177039 aattacaatgaattttttgattttttc--aaattattagctgtgttggcgtatcagtgtccgagtcgtatctggtgtctgtgtccgtatccgtgcttcat 17177136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 30135357 - 30135289
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||||||| |||||||||||||| ||||||||||||  |||||| |||||| || ||||||||||||    
T  30135357 aattacaatgagttatgtgatttttt-tcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgt 30135289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 403
Target Start/End: Complemental strand, 6035542 - 6035463
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||| || ||| ||| ||||||| ||||||||   ||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  6035542 acgacaccgacaaatataattacactgaattat---attatttctcaaattattagcggtgtcggcgtgtcagtgtctttgtc 6035463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 26799214 - 26799115
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||| | ||||||| | ||| ||||| | |||||||||| ||||| ||||||||||||| | ||||||| ||||||||| || |||||    
T  26799214 aattacattgaattatattatttttttt-aaactattaactgtgtcgacgtatcagtatctgtgtcgtgtttgatgtctgtgtccgtatccttgattcat 26799116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 31084366 - 31084309
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||||||||    
T  31084366 aattacattgaattatgtgattttttc--aaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 400
Target Start/End: Complemental strand, 39205940 - 39205863
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgt 400  Q
    ||||| |||||||||| |||||||   |||||| |||||||  |||||||||||||| ||||||||||||| ||||||||    
T  39205940 acgacaccaacacatataattacacctaattatatgatttt--ctcaaattattagcagtgtcgacgtgtccgtgtctgt 39205863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 6247665 - 6247581
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| |||||||||||||||||||  ||||||||||  |||||| |||||||||||  || |||||| ||||||| | ||||||    
T  6247665 aattacactgaattatgtgattttttc--aaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccgcatccgt 6247581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 407
Target Start/End: Original strand, 15410484 - 15410531
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||||| |||||||||||||||||| |||||||||||| |||||||||    
T  15410484 ttttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 15410531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 438
Target Start/End: Complemental strand, 19579734 - 19579646
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||||||||||||  |||||||||||||| |||||| ||| |||||||| |||| || | ||||||| || | ||||||| |||||||||    
T  19579734 aattatgtgatttt--ctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtgtacgtatccgtgcttcata 19579646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 401
Target Start/End: Original strand, 38749568 - 38749640
Alignment:
Q  327 ccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtg 401  Q
    |||||||||| ||||||| |||||||||| ||||||||  ||||||||| |||||||||| |||| |||| ||||    
T  38749568 ccaacacatataattacattgaattatgtcattttttc--aaattattatcggtgtcgacatgtccgtgtttgtg 38749640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 414
Target Start/End: Original strand, 42488096 - 42488143
Alignment:
Q  367 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgt 414  Q
    ||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  42488096 aaattatcaacggtgtcgacgtgtcagtgtctgtgtcgtgttcagtgt 42488143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 11686015 - 11685925
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||||||| |||| |||| || ||||||| ||||||| | ||||||| || |||  ||||||||||||||||||||| | ||||||||||    
T  11686015 tcgtgtccgacaccgaa-cgacaccgacacatataattacactaaattatgcgacttt--ctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 14674312 - 14674249
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| | |||||||||||||||||  ||||||||||| |||||| |||||||||||| |||||    
T  14674312 aattacactaaattatgtgattttttc--aaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 39698618 - 39698527
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||||||| ||| ||||| |  |||| |  ||||||| |||||||||||||||||  ||||||||||||| |||||  ||||||||||||    
T  39698618 tcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttt--tcaaattattagctgtgtcagcgtgtcagtgtc 39698527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 43001843 - 43001780
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||||||||| ||||||||  ||||||||||| |||||||| |||||||||| |||||    
T  43001843 aattacactgaattatgtaattttttc--aaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 428
Target Start/End: Complemental strand, 21542107 - 21541985
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||| ||| ||||| || |||| |  ||||||| |||||||||| || ||||   ||||||||||  |||||| | ||||| ||||||||||    
T  21542107 tcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatcttttt--aaattattagttgtgtcggcatgtcaatgtctgtgtc 21542010  T
Q  404 gtgttcggtgtctgtatccgtatcc 428  Q
    ||||  |||||| || |||||||||    
T  21542009 gtgtctggtgtccgtgtccgtatcc 21541985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 403
Target Start/End: Original strand, 7175045 - 7175098
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||||||||||  |||||||||||| ||||||||| ||||||||||| |||||    
T  7175045 aattatgtgatttt--ctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 19438386 - 19438329
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||||||||||||  |||||||||| |||| |||||| |||||||||||    
T  19438386 aattacactgaattatgtgatttt--ctcaaattatcagcgatgtcgatgtgtcagtgtc 19438329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 438
Target Start/End: Original strand, 26205777 - 26205874
Alignment:
Q  339 attacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||| |||||||||| |||||  |||||| | ||| |||| ||||||||||||||||  |||| ||| ||||||| || || || |||||||||||||    
T  26205777 attacactgaattatgtcatttt--ctcaaaattttatcggtatcgacgtgtcagtgtccatgtcatgtccggtgtccgtgtctgtgtccatgcttcata 26205874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 30098369 - 30098312
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||||||||||||  |||||||||||| |||| ||| ||||||||||||    
T  30098369 aattacattgaattatgtgatttt--ctcaaattattaacggtttcgtcgtgtcagtgtc 30098312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 424
Target Start/End: Complemental strand, 42469244 - 42469180
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    |||||||||||||||| | |||||| ||||||| | || ||||||||||||||||| || |||||    
T  42469244 ttttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgt 42469180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 6471888 - 6471948
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtc 383  Q
    ||||| || ||||||| ||||||| ||||||||||||  |||||||||||||||||| |||||    
T  6471888 acgacacccacacatataattacactgaattatgtga--ttttctcaaattattagccgtgtc 6471948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 26716188 - 26716120
Alignment:
Q  338 aattacaat-gaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||||| |||||||||||||||  |||||||||||||| |||||| | ||||| ||||| ||||||||    
T  26716188 aattacaatcgaattatgtgatttt--ctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgt 26716120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 26985928 - 26985860
Alignment:
Q  338 aattacaat-gaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||||| |||||||||||||||  |||||||||||||| |||||| | ||||| ||||| ||||||||    
T  26985928 aattacaatcgaattatgtgatttt--ctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgt 26985860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 392
Target Start/End: Original strand, 28588690 - 28588742
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtca 392  Q
    ||||||| ||||||||||||||||  |||||||||||| |||||||| |||||||    
T  28588690 aattacactgaattatgtgatttt--ctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 4105302 - 4105228
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggt 412  Q
    ||||||| ||||||||||||| |||| ||||||||||||   ||||| ||||||||| || ||||| ||| ||||    
T  4105302 aattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgtcatgtccggt 4105228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 5467994 - 5468057
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||||||||||||||| ||  ||||||||| |||| | ||||||||||||||| ||||    
T  5467994 aattacactgaattatgtgattttatc--aaattattatcggtattgacgtgtcagtgtctatgtc 5468057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 27932278 - 27932212
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||||| |||||  ||||||||||||||||||||| |||| | ||||| |||||||||    
T  27932278 aattacactgaattatgtaatttt--ctcaaattattagcggtgtcggcgtggc-gtgtcagtgtcgtgt 27932212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 32766932 - 32767003
Alignment:
Q  311 cgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcg 384  Q
    ||||| ||| ||||| | |||||||| ||||||| |||||| || ||||||  |||||||||||||||||||||    
T  32766932 cgacaccgacacgacacaaacacatataattacattgaattgtgcgatttt--ctcaaattattagcggtgtcg 32767003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 394
Target Start/End: Original strand, 38816731 - 38816765
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagt 394  Q
    ||||||||||||||||||||||||| |||||||||    
T  38816731 ttttctcaaattattagcggtgtcggcgtgtcagt 38816765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 5873549 - 5873594
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 405  Q
    ||||||||||||||||| ||||||| | |||||||||| |||||||    
T  5873549 ttttctcaaattattagaggtgtcggcatgtcagtgtccgtgtcgt 5873594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 404
Target Start/End: Complemental strand, 9449510 - 9449448
Alignment:
Q  340 ttacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcg 404  Q
    ||||| ||||||||||||||||  ||||||||||||  ||||||| |||| ||||||| ||||||    
T  9449510 ttacattgaattatgtgatttt--ctcaaattattattggtgtcggcgtgccagtgtccgtgtcg 9449448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 397
Target Start/End: Complemental strand, 17123071 - 17123034
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  17123071 ttttctcaaattattagcggtgttggcgtgtcagtgtc 17123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 30502396 - 30502446
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgt 382  Q
    ||||||| ||||||| ||||||| ||||||||  |||||||||||||||||||    
T  30502396 acacatataattacactgaattaagtgatttt--ctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 382
Target Start/End: Original strand, 30542739 - 30542789
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgt 382  Q
    ||||||| ||||||| ||||||| ||||||||  |||||||||||||||||||    
T  30542739 acacatataattacactgaattaagtgatttt--ctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 391
Target Start/End: Complemental strand, 38866497 - 38866445
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtc 391  Q
    ||||||| |||||||||| ||||||| ||||| ||||| |||||||||||||||    
T  38866497 aattacattgaattatgtcatttttt-tcaaaatattatcggtgtcgacgtgtc 38866445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 2039885 - 2039921
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgt 396  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  2039885 ttttctcaaattattaccggtgtcgacgtgtccgtgt 2039921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 4206349 - 4206313
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgt 396  Q
    |||||||||||||||| |||||| |||||||||||||    
T  4206349 ttttctcaaattattaacggtgttgacgtgtcagtgt 4206313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 398
Target Start/End: Original strand, 9878070 - 9878106
Alignment:
Q  362 ttctcaaattattagcggtgtcgacgtgtcagtgtct 398  Q
    ||||||||||||||  |||||||||||||||||||||    
T  9878070 ttctcaaattattattggtgtcgacgtgtcagtgtct 9878106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 17393392 - 17393448
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtct 416  Q
    ||||||||||||||| |||||||| | |||||| ||| |||||| ||||| ||||||    
T  17393392 ttttctcaaattattggcggtgtctatgtgtcaatgtatgtgtcctgttccgtgtct 17393448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 405
Target Start/End: Complemental strand, 18592148 - 18592051
Alignment:
Q  306 gtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 405  Q
    |||||||||| ||| ||||| ||  |||||| ||||||| |||||||||| |||||  || ||| |||||||||||||| | | ||||||| | ||||||    
T  18592148 gtgtccgacaccgacacgacaccggcacatataattacattgaattatgtaatttt--cttaaaatattagcggtgtcggcatatcagtgtttatgtcgt 18592051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 415
Target Start/End: Original strand, 22423802 - 22423903
Alignment:
Q  312 gacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcgg 411  Q
    |||| ||| ||||| || ||| ||| ||||| | ||||||||||||||||  |||||||||||||  |||||   |||||||| || ||||||||||||     
T  22423802 gacaccgacacgacaccgacatatataattatattgaattatgtgatttt--ctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtgttcga 22423899  T
Q  412 tgtc 415  Q
    ||||    
T  22423900 tgtc 22423903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 413
Target Start/End: Original strand, 24906317 - 24906390
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtg 413  Q
    ||||||| |||||||||| ||||||||  ||||||||| | |||| | |||||||||||  ||||||||| |||||    
T  24906317 aattacactgaattatgtcattttttc--aaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtccggtg 24906390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 402
Target Start/End: Complemental strand, 32444840 - 32444747
Alignment:
Q  307 tgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 402  Q
    |||||||||| || ||||| || ||||||   |||||| |||||||||| || ||  |||||||| |||  ||||| |||||||||||||||||||    
T  32444840 tgtccgacattgacacgacaccgacacatttgattacattgaattatgtcatctt--ctcaaattgttaatggtgttgacgtgtcagtgtctgtgt 32444747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 405
Target Start/End: Original strand, 40000559 - 40000616
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgt 405  Q
    |||||||||||||||||||  |||||||||   |||||||| |||||||||| |||||||    
T  40000559 tgaattatgtgattttttc--aaattattaagagtgtcgacatgtcagtgtccgtgtcgt 40000616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 383
Target Start/End: Original strand, 41091243 - 41091316
Alignment:
Q  308 gtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtc 383  Q
    ||||||||| || |||||  | ||||||| ||||||| ||||||||||||  ||||||||||| |||||| |||||    
T  41091243 gtccgacattgacacgacatcgacacatataattacactgaattatgtga--ttttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 438
Target Start/End: Original strand, 16000034 - 16000130
Alignment:
Q  340 ttacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||| |||||||||| |||||||   ||||||||||  |||||| |||||||||||||||||||||||||||||| || ||||||||| |||||||||    
T  16000034 ttacactgaattatgttattttttt--aaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtgtccgtatccgtgcttcata 16000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 424
Target Start/End: Complemental strand, 25064984 - 25064868
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||| | | ||||  ||||||||||  |||||| | |||||||||||||||||  |||| ||||||||||||| ||||||| ||||||||||    
T  25064984 tcgtgtccgacaccaacacgataccaacacata--attacactaaattatgtgattttttc--aaatcattagcggtgtcggcgtgtcaatgtctgtgtc 25064889  T
Q  404 gtgttcggtgtctgtatccgt 424  Q
    |||| ||||||||||| ||||    
T  25064888 gtgtccggtgtctgtacccgt 25064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 438
Target Start/End: Original strand, 3164043 - 3164139
Alignment:
Q  340 ttacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||| |||||||||||||||||||  ||||||||||| ||||||||||| || |||| ||||||||| ||||||| || || |||||| |||||||||    
T  3164043 ttacactgaattatgtgattttttc--aaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcata 3164139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 415
Target Start/End: Complemental strand, 14829766 - 14829658
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||| ||| ||| ||||| || |||| |  |||||| ||||||||||||||||||   |||||||||||| |||||| ||||||||||||||||||    
T  14829766 tcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattatgtgattttt---caaattattagctgtgtcggcgtgtcagtgtctgtgtc 14829670  T
Q  404 gtgttcggtgtc 415  Q
     ||| |||||||    
T  14829669 atgtccggtgtc 14829658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 34307796 - 34307894
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||  |||||  ||||||||||| ||| ||||||  || ||||||||||||||||||    
T  34307796 aattacactgaaatatgtgatttt--ctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtgttcgtgtccgtatccatgcttcat 34307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 11666021 - 11665889
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||  ||||| | ||||| || ||||||| ||||||| | |||| ||||||||| ||  |||||||||||| |||||  |||| ||||| ||||||    
T  11666021 tcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgattttatc--aaattattagcgttgtcggtgtgttagtgtgtgtgtc 11665924  T
Q  404 gtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||| |||||||||||||| ||| | |||||||||    
T  11665923 gtgtccggtgtctgtatccatattcgtgcttcata 11665889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 426
Target Start/End: Original strand, 4990966 - 4991069
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 420  Q
    |||||||| |||| |  ||||||| |||||||||| |||||  |||||| ||||||||||||||  |||||||| || ||||||||||||||||| || |    
T  4990966 acgacgccgacacttgtaattacactgaattatgtaatttt--ctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgtgt 4991063  T
Q  421 ccgtat 426  Q
    ||||||    
T  4991064 ccgtat 4991069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 14747605 - 14747512
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| | |||||||||||||||| ||||||||||||| |||||| ||||||||      |||||||| ||||||| |||||||||||| ||||||||    
T  14747605 aattacactaaattatgtgatttttt-tcaaattattagctgtgtcggcgtgtcag------tgtcgtgtccggtgtccgtatccgtatccgtgcttcat 14747513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 15796310 - 15796408
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||| ||||||||||  ||||||||| | |||||| ||||||| |||| ||||||||| ||||||| || ||| ||||| ||||||||    
T  15796310 aattacactgaattatatgattttttc--aaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccatatccgtgcttcat 15796407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 8383300 - 8383216
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| |||||||| |||||||  ||||||||||||||||||||| ||||||| |||| ||||||||| | ||||| || |||||    
T  8383300 aattacactgaattatatgatttt--ctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgt 8383216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 40993343 - 40993409
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| ||||| |||||    
T  40993343 acacatataattacactgaattatgtgatttttt-ttaaattattagcggtgtcgaggtgtccgtgtc 40993409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 407
Target Start/End: Original strand, 5441055 - 5441114
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||||||||||||  |||||||| ||||||||| || ||||||||||||||||||||||    
T  5441055 tgaattatgtgatttt--ctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgt 5441114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 21479161 - 21479069
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||| ||||||||||||  ||||||||||| |||||| ||||||||      |||||||| ||||||| || ||||||||||||||||||    
T  21479161 aattacactgaattgtgtgattttttc--aaattattagctgtgtcggcgtgtcag------tgtcgtgtccggtgtccgtgtccgtatccatgcttcat 21479070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 24205077 - 24205155
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||||||||||||| | |||||| |||||||||||| ||||||||| ||||||| || || || ||| |||||||||    
T  24205077 ttttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgcttcata 24205155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 415
Target Start/End: Complemental strand, 28918044 - 28917969
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||| |||||||||||||||||||  |||||||||||  ||||| ||||||||| || ||||||||| |||||||    
T  28918044 aattacactgaattatgtgattttttc--aaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtc 28917969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 35994754 - 35994851
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||||||||||   |||||||||||| |||||| | ||||| ||||  |||||||| |||||||  | ||||||||| ||||||||    
T  35994754 aattacactgaattatgtgattttt---caaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccatgtccgtatccgtgcttcat 35994850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 438
Target Start/End: Original strand, 750643 - 750733
Alignment:
Q  347 gaattatgtgattttttctcaaattattagcggtgtcgacgtgtc-agtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||||||||||| |||||  ||||||||||  |||||| |||||| |||||| ||||||||| ||||||| || ||||||||| |||||||||    
T  750643 gaattatgtgatattttc--aaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 396
Target Start/End: Original strand, 4987273 - 4987363
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgt 396  Q
    |||||||| ||| ||| ||| | ||||||| |  ||||||| |||||||||||||||||  ||||||||||||| |||||| |||||||||||    
T  4987273 tcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttt--tcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 438
Target Start/End: Original strand, 10335327 - 10335400
Alignment:
Q  365 tcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||||||||||  |||||| |||||||||||| ||||||||| ||||||| || | ||||||| |||||||||    
T  10335327 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcata 10335400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 418
Target Start/End: Complemental strand, 25093553 - 25093467
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgt 418  Q
    ||||||| ||||||| |||||| |||||||||  ||||||| |||| | |||||| ||||| |||||| ||||||||| ||||||||||    
T  25093553 acacatataattacactgaattgtgtgatttt--ctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtctgt 25093467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 10219743 - 10219644
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||| | ||||||| | ||| ||||| | |||||||||| ||||| ||||||||||||| | ||||||| ||||||||| || |||||    
T  10219743 aattacattgaattatattatttttttt-aaactattaactgtgtcgacgtatcagtatctgtgtcgtgtttgatgtctgtgtccgtatccttgattcat 10219645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 404
Target Start/End: Original strand, 11493372 - 11493441
Alignment:
Q  333 catacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcg 404  Q
    |||| ||||||| ||||||||||||||||  |||| |||||||| ||||||||||||||| |||| ||||||    
T  11493372 catataattacactgaattatgtgatttt--ctcacattattagtggtgtcgacgtgtcaatgtccgtgtcg 11493441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 41319318 - 41319383
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||||||||||| |||||||||| ||||||  |||||||||||  |||||||||||||| |||||    
T  41319318 acacatacaattacattgaattatgtcattttt--tcaaattattattggtgtcgacgtgtccgtgtc 41319383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 438
Target Start/End: Complemental strand, 4469891 - 4469795
Alignment:
Q  340 ttacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    ||||| ||||||||||||  |||||| |||||||| ||||| | | ||||||| |||||||||| |||| ||||| ||| || |||||| |||||||||    
T  4469891 ttacactgaattatgtga--ttttcttaaattattggcggtattggcgtgtcaatgtctgtgtcttgttaggtgtttgtgtctgtatccgtgcttcata 4469795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 384
Target Start/End: Complemental strand, 7928501 - 7928449
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcg 384  Q
    ||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||    
T  7928501 acacatataattacactgaattatgtgattttt--tcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 407
Target Start/End: Complemental strand, 9800100 - 9800016
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||| || |||| ||||||||||  ||||||||| |||||  ||||||||||||| ||||||| |||||||||||  |||||||||    
T  9800100 acgacaccgacacttacaattacacggaattatgtaatttt--ctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgt 9800016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 403
Target Start/End: Original strand, 25948886 - 25948966
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||| ||||||| || ||||||| |||||||||||||||||  ||||||||||||| || ||| | |||||||||| |||||    
T  25948886 acgacaccaacacttataattacactgaattatgtgattttt--tcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 391
Target Start/End: Original strand, 5407263 - 5407314
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtc 391  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||| ||||||    
T  5407263 aattacaatgaattatgtga--ttttctcaaatttttagcggtgtcggcgtgtc 5407314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 392
Target Start/End: Original strand, 8039820 - 8039903
Alignment:
Q  307 tgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtca 392  Q
    ||||||||| ||| ||||| || ||||||| ||||||| |||||||| | |||||  ||||||||||||||||||| | |||||||    
T  8039820 tgtccgacaccgacacgacaccgacacatataattacactgaattatataatttt--ctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 435
Target Start/End: Complemental strand, 11658866 - 11658764
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| ||| ||| ||||||||| ||||||  |||||||||||| || ||| |  |||||||||||||||||||| || |||||||| | |||||||     
T  11658866 acacatataatcacactgaattatgcgatttt--ctcaaattattaacgatgttggtgtgtcagtgtctgtgtcgtg-tccgtgtctgtgttcgtatccg 11658770  T
Q  430 tgcttc 435  Q
    ||||||    
T  11658769 tgcttc 11658764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 26508153 - 26508086
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||||  ||||||||| ||||| ||||||    
T  26508153 aattacactgaattatgtgattttttc--aaattattagctgtgtcagcgtgtcagtatctgtatcgtgt 26508086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 10268502 - 10268600
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| | |||||||||||||||||  ||||||||| | |||||| ||||||||||||  ||||||  ||| |||| || | ||||||| ||||||||    
T  10268502 aattacactaaattatgtgattttttc--aaattattaactgtgtcggcgtgtcagtgtccatgtcgtaatcgatgtccgtgttcgtatccgtgcttcat 10268599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 384
Target Start/End: Original strand, 16192732 - 16192810
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcg 384  Q
    ||||||| |||| ||| |||||  ||||||||| ||||||| |||||||||| |||||  |||||||||||| ||||||||    
T  16192732 tcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgttatttt--ctcaaattattaacggtgtcg 16192810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 399
Target Start/End: Complemental strand, 21305289 - 21305229
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctg 399  Q
    ||||||| | |||||||||||||||| |||||||||||| ||||||| ||||| ||||||||    
T  21305289 aattacatttaattatgtgatttttt-tcaaattattagaggtgtcggcgtgttagtgtctg 21305229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 330 - 438
Target Start/End: Complemental strand, 38731269 - 38731163
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatcca 429  Q
    ||||||| || |||| ||||||||||||||||||   |||||||||||||| ||||| |||| ||||   |||||||| || |||| || |||| ||||     
T  38731269 acacatataactacactgaattatgtgatttttta--aaattattagcggtatcgacatgtcggtgtacatgtcgtgtccgttgtccgtgtccgcatccg 38731172  T
Q  430 tgcttcata 438  Q
    |||||||||    
T  38731171 tgcttcata 38731163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 40052368 - 40052318
Alignment:
Q  345 atgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||||||||||||||||  ||||||||||| |||||| ||||||||||||    
T  40052368 atgaattatgtgattttttc--aaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 6525716 - 6525752
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgt 396  Q
    ||||||||||||||||||||||||||| |||||||||    
T  6525716 ttttctcaaattattagcggtgtcgacatgtcagtgt 6525752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 421
Target Start/End: Original strand, 8587037 - 8587118
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 421  Q
    ||||||| | |||||||||||||||||  |||||| |||  |||||| |||||||||||| ||||| ||| ||||||| |||||    
T  8587037 aattacacttaattatgtgattttttc--aaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatc 8587118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 10504939 - 10504995
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtct 416  Q
    |||| ||||||||||| |||||| |||||||||||| || |||||||| ||||||||    
T  10504939 ttttttcaaattattatcggtgttgacgtgtcagtgcctatgtcgtgtccggtgtct 10504995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 397
Target Start/End: Original strand, 23870583 - 23870632
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||| |||||    
T  23870583 tgaattatatgattttttc--aaattattagcggtgtcgacgtgtccgtgtc 23870632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 415
Target Start/End: Original strand, 41961632 - 41961741
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||| | ||| ||||| || |||| |  |||||||  |||| ||||||| |||||  ||||||||||  ||| || ||||||||||||||||||    
T  41961632 tcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttc--aaattattagttgtgacggcgtgtcagtgtctgtgtc 41961729  T
Q  404 gtgttcggtgtc 415  Q
    |||| |||||||    
T  41961730 gtgtccggtgtc 41961741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 421
Target Start/End: Complemental strand, 55401118 - 55401037
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 421  Q
    ||||||| | |||||||||||||||||  ||||||||||  |||||| ||| |||||||| ||||||| | ||||||| |||||    
T  55401118 aattacactaaattatgtgattttttc--aaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatc 55401037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 11610561 - 11610497
Alignment:
Q  341 tacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||| ||||||||||||||||||   |||||||||||||||| | ||||||||| ||||||| ||||    
T  11610561 tacactgaattatgtgattttttt--aaattattagcggtgttggcgtgtcagtatctgtgttgtgt 11610497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 407
Target Start/End: Original strand, 14223889 - 14223936
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||||||||||||||| | |||||| |||||| |||||||||||||||    
T  14223889 ttttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgt 14223936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 407
Target Start/End: Complemental strand, 14979225 - 14979157
Alignment:
Q  337 caattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||||||| |||||||||||||||||  ||||||||||||| |||||| |||| || ||||  ||||||||    
T  14979225 caattacactgaattatgtgattttt--tcaaattattagctgtgtcggcgtgccattgtccttgtcgtgt 14979157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 397
Target Start/End: Complemental strand, 15544727 - 15544679
Alignment:
Q  347 gaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||||||||||| ||  ||||||||||||||||| |||||||||||||    
T  15544727 gaattatgtgattttatc--aaattattagcggtgtcaacgtgtcagtgtc 15544679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 438
Target Start/End: Complemental strand, 10455850 - 10455735
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 420  Q
    ||||| |||||||||| ||||||| | | |||| |||||||  |||| ||||||||| |||| | ||||||| || ||||||||||| | ||||| || |    
T  10455850 acgacaccaacacatataattacacttagttatatgatttt--ctcatattattagcagtgttggcgtgtcaatgcctgtgtcgtgtccagtgtccgtgt 10455753  T
Q  421 ccgtatccatgcttcata 438  Q
    |  ||||| |||||||||    
T  10455752 ctatatccgtgcttcata 10455735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 10954994 - 10954939
Alignment:
Q  339 attacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgt 396  Q
    |||||| |||||||||||||||||  ||||||||||||  |||||| |||||||||||    
T  10954994 attacactgaattatgtgattttt--tcaaattattagttgtgtcggcgtgtcagtgt 10954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 418
Target Start/End: Original strand, 12674537 - 12674595
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgt 418  Q
    |||||||||||||||||| ||||||  |||||| |||| |||||||||  |||||||||    
T  12674537 ttttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtctggtgtctgt 12674595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 14216935 - 14216868
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||| |||| ||||   ||||||||||  ||||||||||||||||||| |||||||||    
T  14216935 aattacactgaattatatgatatttta--aaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgt 14216868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 14223064 - 14222997
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||| |||| ||||   ||||||||||  ||||||||||||||||||| |||||||||    
T  14223064 aattacactgaattatatgatatttta--aaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgt 14222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 21720807 - 21720744
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| ||||||||| ||| ||  |||||||||||| |||||||| |||||||||||| |||||    
T  21720807 aattacactgaattatgagatatt--ctcaaattattatcggtgtcggcgtgtcagtgtccgtgtc 21720744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 403
Target Start/End: Original strand, 22774086 - 22774149
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||| ||||||| ||| |||  ||||||||| |||||||||||||| |||||||||||    
T  22774086 aattacactgaaatatgtgactttgtct--aattattagtggtgtcgacgtgtctgtgtctgtgtc 22774149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 26492221 - 26492288
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||| | ||||||||||  |||||||||||  ||||| |||||||||||| |||||||||    
T  26492221 aattacactgaattgtatgattttttc--aaattattagctctgtcggcgtgtcagtgtccgtgtcgtgt 26492288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 426
Target Start/End: Complemental strand, 28678363 - 28678260
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 420  Q
    ||||| || ||||||||||||| | | |||||||||||||| |   ||||||||||| | |||| | ||||||||||| |||||||||  |||| ||| |    
T  28678363 acgacaccgacacatacaattatactaaattatgtgattttatt--aaattattagcagcgtcggcatgtcagtgtctatgtcgtgtttagtgtttgtgt 28678266  T
Q  421 ccgtat 426  Q
    ||||||    
T  28678265 ccgtat 28678260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 414
Target Start/End: Complemental strand, 3610676 - 3610602
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgt 414  Q
    ||||||| ||| |||||| |||||||   ||||||||| | |||| | |||||||||||||||||||||| ||||||    
T  3610676 aattacactgagttatgttattttttt--aaattattaactgtgttggcgtgtcagtgtctgtgtcgtgtccggtgt 3610602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 406
Target Start/End: Original strand, 32804548 - 32804622
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtg 406  Q
    ||||||| ||||||| | ||||||||||||||  |||||||||||| |||||||| | ||||| || | ||||||||    
T  32804548 acacatataattacactaaattatgtgatttt--ctcaaattattaacggtgtcggcatgtcaatgcccgtgtcgtg 32804622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 2620079 - 2620136
Alignment:
Q  348 aattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||||||||||  ||||||| ||||| ||||||| |||||||||||| | |||||||    
T  2620079 aattatgtgatttt--ctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgt 2620136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 7949010 - 7948959
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgt 382  Q
    ||||||||||||||| |||||||||| | ||||||||||| ||||| ||||||    
T  7949010 acacatacaattacattgaattatgtca-tttttctcaaactattatcggtgt 7948959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 384
Target Start/End: Original strand, 11313807 - 11313860
Alignment:
Q  329 aacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcg 384  Q
    |||||||| ||||||| | ||||||||||  |||||||||||||||||| ||||||    
T  11313807 aacacatataattacactaaattatgtga--ttttctcaaattattagcagtgtcg 11313860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 391
Target Start/End: Complemental strand, 12704056 - 12703999
Alignment:
Q  332 acatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtc 391  Q
    ||||| ||||||| ||||||||||| ||||  ||||||||||||| ||||||| ||||||    
T  12704056 acatataattacactgaattatgtgctttt--ctcaaattattagtggtgtcggcgtgtc 12703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 403
Target Start/End: Complemental strand, 14209190 - 14209094
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||| ||| ||||| |  |||| |  ||||||| |||||||||||||||||  | ||||||||||  |||||| |||||| |||||||||||    
T  14209190 tcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttt--taaaattattagttgtgtcggcgtgtc-gtgtctgtgtc 14209094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 29112296 - 29112353
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| |||||||| |||||||  ||||||| ||||| |||||| |||||||||||||    
T  29112296 aattacactgaattatatgatttt--ctcaaataattagtggtgtcaacgtgtcagtgtc 29112353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 49505162 - 49505227
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| ||||||| | ||||||||||||||  ||||||||||||||||| ||  |||||| |||||    
T  49505162 acacatataattacactaaattatgtgatttt--ctcaaattattagcggtctctgcgtgtcggtgtc 49505227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 8821 - 8743
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcata 438  Q
    |||| ||||||||||||| |||||| |||||||||||| ||||||||| ||||||| || |||||||||||||||||||    
T  8821 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcata 8743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 478 - 575
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||| ||||||||||||  ||||||||||| |||||| ||| |||||||| ||| ||||||||||||| || ||||||||| ||||||||    
T  478 aattacactgaattttgtgattttttc--aaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccgtatccgtgcttcat 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 46725 - 46627
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||||||||||||  ||||||||| | |||||| ||||||| |||| ||||||||| || |||| || ||||||||| ||||||||    
T  46725 aattacactgaattatgtgattttttc--aaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgcttcat 46628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 130525 - 130427
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    ||||||| |||||||||||||||||||  ||| ||||| | |||||| | ||||| |||| ||||||||| ||||||| || ||||||||||||||||||    
T  130525 aattacactgaattatgtgattttttc--aaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcat 130428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 421
Target Start/End: Complemental strand, 20215 - 20134
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatc 421  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||||| ||||||| |||| ||||||||| ||||||| |||||    
T  20215 aattacactgaattatgtgattttttc--aaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatc 20134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 422
Target Start/End: Original strand, 135311 - 135410
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 420  Q
    ||||| || ||||||| |||||||  |||||||||||||||  |||||||||||||| ||||||  ||||  ||||||||||||| ||||||||| ||||    
T  135311 acgacaccgacacatataattacacagaattatgtgatttt--ctcaaattattagcagtgtcggtgtgttggtgtctgtgtcgtattcggtgtccgtat 135408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 407
Target Start/End: Complemental strand, 23589 - 23486
Alignment:
Q  303 atcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 402  Q
    ||||||||||||| ||||||||| |  |||| || ||||||| |||||||||||||||||| | || |||||| | ||||||  |||||||||| |||||    
T  23589 atcgtgtccgacaccgaaacgacactgacacttataattacactgaattatgtgatttttt-ttaagttattaactgtgtcggtgtgtcagtgtatgtgt 23491  T
Q  403 cgtgt 407  Q
    |||||    
T  23490 cgtgt 23486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 424
Target Start/End: Complemental strand, 23480 - 23380
Alignment:
Q  321 acgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtat 420  Q
    ||||| || |||| || ||||||| ||||||||||||||||||    | |||||| | |||||| ||||||||||||||||||||| || ||||| ||||    
T  23480 acgacaccgacacttataattacactgaattatgtgatttttttg--agttattatctgtgtcggcgtgtcagtgtctgtgtcgtg-tccgtgtccgtat 23384  T
Q  421 ccgt 424  Q
    ||||    
T  23383 ccgt 23380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 304 - 415
Target Start/End: Complemental strand, 241671 - 241562
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    |||||||||||| | | ||||| || ||||  | ||||||| | ||||||||||||||| |  ||||||||||| |||||| |||||||||||| |||||    
T  241671 tcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttcc--aaattattagctgtgtcggcgtgtcagtgtccgtgtc 241574  T
Q  404 gtgttcggtgtc 415  Q
    |||| |||||||    
T  241573 gtgtccggtgtc 241562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 71768 - 71709
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| |||||| ||||||||||| ||||||||||||| |||||| ||||||||||||    
T  71768 aattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtgtc 71709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 51854 - 51791
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||||||||| |||||    
T  51854 aattacactgaattatgtgattttttc--aaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 403
Target Start/End: Complemental strand, 26428 - 26373
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||| ||||||||||    
T  26428 tgaattatgtgatttt--ctcaaattattagtggtgtcgacgtgtcactgtctgtgtc 26373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 414
Target Start/End: Complemental strand, 1086 - 1004
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgt 414  Q
    ||||||| | ||||| |||||||||| ||||||||  ||||||||||||||||||  ||||||| ||||||||||| | ||||||    
T  1086 acacatatagttacactgaattatgtaattttttc--aaattattagcggtgtcggtgtgtcagcgtctgtgtcgtatacggtgt 1004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 424
Target Start/End: Original strand, 178834 - 178919
Alignment:
Q  338 aattacaatgaattatg-tgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| ||||||||| ||||||||||  ||||||||||  |||||| |||||||||||| ||||||||| |||||||  |||||||    
T  178834 aattacactgaattatgatgattttttc--aaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgt 178919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 407
Target Start/End: Original strand, 192285 - 192332
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    |||||||||||||||| |||||||| |||||||||||| || ||||||    
T  192285 ttttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgt 192332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 427
Target Start/End: Original strand, 263354 - 263475
Alignment:
Q  304 tcgtgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtc 403  Q
    ||||||| |||| ||| ||||| |  |||| || ||||||| ||||||||||| ||||  |||||||||||||| |||| ||| |||||||||| |||||    
T  263354 tcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggtttt--ctcaaattattagcagtgttgacatgtcagtgtccgtgtc 263451  T
Q  404 gtgttcggtgtctgtatccgtatc 427  Q
    || | | ||||| || ||||||||    
T  263452 gtatccagtgtccgtgtccgtatc 263475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 92850 - 92793
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtc 397  Q
    ||||||| |||||||||| |||||  ||||||||||||||||||||| ||||||||||||    
T  92850 aattacactgaattatgtaatttt--ctcaaattattagcggtgtcggcgtgtcagtgtc 92793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 424
Target Start/End: Complemental strand, 13435 - 13359
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||||||||||||  |||||||||||||  |||||| |||||||||||| ||||| | | ||||||| ||||||||    
T  13435 tgaattatgtgatttt--ctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgt 13359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 424
Target Start/End: Original strand, 21892 - 21968
Alignment:
Q  346 tgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||||||||||||  |||||||||||||  |||||| |||||||||||| ||||| | | ||||||| ||||||||    
T  21892 tgaattatgtgatttt--ctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgt 21968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 415
Target Start/End: Original strand, 225304 - 225359
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    |||||||||||||||| | |||||| |||||||||||| ||||||||| |||||||    
T  225304 ttttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 225359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 424
Target Start/End: Original strand, 4899 - 4983
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||| |||||||||||||||||| | ||||||||||| ||||||  |||| || || ||||||||| || ||||||||||||||    
T  4899 aattacactgaattatgtgatttttt-ttaaattattagctgtgtcggtgtgttagagtatgtgtcgtg-tccgtgtctgtatccgt 4983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 19618 - 19552
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||||||||||||   |||||||||||  || ||| |||||||||||| |||||||||    
T  19618 aattacactgaattatgtgattttt---caaattattagttgtatcggcgtgtcagtgtcagtgtcgtgt 19552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 393
Target Start/End: Complemental strand, 53254 - 53170
Alignment:
Q  307 tgtccgacatcgaaacgacgccaacacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcag 393  Q
    ||||||||| ||| ||| | || |||| || ||||||| ||||||||||||  ||||||||||||||| ||||| ||| ||||||||    
T  53254 tgtccgacaccgacacggcaccgacacttataattacactgaattatgtga--ttttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Original strand, 3865 - 3932
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||||||||||||  | ||||||||| | |||||| | | ||||||||||||||||||    
T  3865 aattacactgaattatgtgattttt--ttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgt 3932  T

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Target: scaffold0123 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 383
Target Start/End: Original strand, 44533 - 44584
Alignment:
Q  330 acacatacaattacaatgaattatgtgattttttctcaaattattagcggtgtc 383  Q
    ||||||| ||||||| ||||||||||||  |||||||||||| |||||||||||    
T  44533 acacatataattacactgaattatgtga--ttttctcaaatttttagcggtgtc 44584  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 90886 - 90819
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 407  Q
    ||||||| |||||||| |||||||  ||||||||||||  ||||| |  |||||||||||||||||||||    
T  90886 aattacactgaattatatgatttt--ctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtgt 90819  T

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Target: scaffold0475 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 3339 - 3262
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgtatccatgcttcat 437  Q
    |||||| ||||| |||||  ||||||||||||||| || ||||||||| ||||||| || ||  ||||| ||||||||    
T  3339 ttttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgtgtctatatccgtgcttcat 3262  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 402
Target Start/End: Complemental strand, 70321 - 70259
Alignment:
Q  338 aattacaatgaattatgtgattttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgt 402  Q
    ||||||| |||||||||| ||||||||  ||||||||| | |||||||| |||| ||||||||||    
T  70321 aattacactgaattatgttattttttc--aaattattaactgtgtcgacatgtctgtgtctgtgt 70259  T

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Target: scaffold0279 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 424
Target Start/End: Original strand, 17906 - 17970
Alignment:
Q  360 ttttctcaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtctgtatccgt 424  Q
    ||||||||||||||||||||||| | |||||  |||| ||| |||||| | ||||| ||||||||    
T  17906 ttttctcaaattattagcggtgtaggcgtgttggtgtttgtatcgtgtccagtgtccgtatccgt 17970  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 415
Target Start/End: Complemental strand, 8682 - 8634
Alignment:
Q  367 aaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgttcggtgtc 415  Q
    ||||||||||  |||||||||||||||||||  |||||||| |||||||    
T  8682 aaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtccggtgtc 8634  T

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