View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8763_low_7 (Length: 294)
Name: NF8763_low_7
Description: NF8763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8763_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 16 - 286
Target Start/End: Original strand, 47628640 - 47628910
Alignment:
| Q |
16 |
cagtaacgaatcagccaggaagcgcattccacgagtagctatatatcttggaggagagggtaaaaatggaagaaactcaccaccattcttcaactctcct |
115 |
Q |
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| T |
47628640 |
cagtaacgaatcagccagaaagcgcattccacgagtagctatatatcttggaggagagggtaaaaatggaagaaactcaccaccattcttcaactctcct |
47628739 |
T |
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| Q |
116 |
acagtacccttccattctcgaaccaaacccttatccaaccaaacattaacaatttcagcaaaacgagaatcattgacagtaaaaaactgagcagcatggt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47628740 |
acagtacccttccattctcgaaccaaacccttatccaaccaaacattaacaatttcagcaaaacgagaatcattgacagtaaaaaactgagcagcatggt |
47628839 |
T |
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| Q |
216 |
caaaaaccaaagaatcatattcatcatcaataagccttgttcccaatcttcctccaagaccatgaacacca |
286 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |
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| T |
47628840 |
caaaaaccaaagaatcatattcatcatcaataatccttgttcccaatcttcctccaagaccatgaagacca |
47628910 |
T |
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