View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8766_low_12 (Length: 231)
Name: NF8766_low_12
Description: NF8766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8766_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 45703619 - 45703414
Alignment:
| Q |
12 |
gagtttggtggtaacaaaggtatttacccacttgatgaatgaaaattaacattttaaaatgtgtgagatgtatgcatatgagagataggtaaccaaagag |
111 |
Q |
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| T |
45703619 |
gagttttgtggtaacaaaggtatttacccacttgatgaatgaaaattaacattttaaaatgtgtgagatgtatgcatatgagagataggtaaccaaagag |
45703520 |
T |
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| Q |
112 |
tttttggtctgaagttgtgagtacatcaacgtaattgatcaatagaagtctgtcaacacaacttcaagagaactatgaatgtttggagtggaaaaccaac |
211 |
Q |
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| T |
45703519 |
tttcaggtctgaagttgtgagtacatcaacgtaattgatcaatagaagtctgtcaacacaacttcaagagaactatgaatgtttggagtggaaaaccaac |
45703420 |
T |
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| Q |
212 |
aaactg |
217 |
Q |
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|||||| |
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| T |
45703419 |
aaactg |
45703414 |
T |
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