View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8768_low_14 (Length: 228)
Name: NF8768_low_14
Description: NF8768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8768_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 38771643 - 38771449
Alignment:
| Q |
16 |
atgaactatgaagtatccatcggcttcatcgcctttaatgggtttcctctcccaactgcatttgtttcattcacaaggttcaaactcttgatttgatgat |
115 |
Q |
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| T |
38771643 |
atgaactatgaagtatccatcggcttcatcgcctttaatgggtttcctctcccaactacatttgtttcattcacaaggttcaaactcttgatttgatgat |
38771544 |
T |
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| Q |
116 |
ttagaaagaaaatgaaatatcatttagctttttgttgatttgacaaacaattaacattctcacacaaattctatccatgtatagaatgaagatgc |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38771543 |
ttagaaagaaaatgaaatatcatttagctttttgttgatttgacaaacaattaacattctcacacaaattctatccatgtatagaatgaagatgc |
38771449 |
T |
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