View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8769_low_9 (Length: 208)
Name: NF8769_low_9
Description: NF8769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8769_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 30261028 - 30261202
Alignment:
| Q |
16 |
atgaagaattgattagtgtggcgactgtgaggtgagtataggatctgctactactaagaatcaaatacaataacagattatgcatgattcagtgattgca |
115 |
Q |
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| T |
30261028 |
atgaagaattgattagtgtggcgactgtgaggtgagtataggatctgctactactaagaat-aaatacaataacagattatgcatgattcagtgattgca |
30261126 |
T |
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| Q |
116 |
tttcaagtttccataacttggcatttcatgttttaggatatttggacagaagatagcagaagtgcccctcgtaggt |
191 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
30261127 |
tttcaagtttccgtaacttggcatttcatgttttaggatatttggagagaagatagcagaagtgcccctcgtaggt |
30261202 |
T |
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