View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8770_high_15 (Length: 265)
Name: NF8770_high_15
Description: NF8770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8770_high_15 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 19 - 254
Target Start/End: Original strand, 4378978 - 4379213
Alignment:
| Q |
19 |
accgttaacctacgccggcgtggcaatgttaacagcaagatcaccgtcacactcactccgttgcaacaaccacttcttggtgctggtggtggcagttatt |
118 |
Q |
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| T |
4378978 |
accgttaacctacgccggcgtggcaatgttaacagcaagatcaccgtcacactcactccgttgtaacaaccacttcttggtgctggtggtggcagttatt |
4379077 |
T |
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| Q |
119 |
ctcctcctcctccttcttctaccttattcctctctcgctatccgaactactcactccgatcgaatcgactcccaactcaccaactccactgccgactcca |
218 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4379078 |
ctcctcctccttcttcttctaccttattcctctctcgctatccgaactactcactccgatcgaatcgactcccaactcaccaactccactgccgactcca |
4379177 |
T |
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| Q |
219 |
acgtctctctctccacaacatctcgacaaggttcat |
254 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
4379178 |
acgtctctctctccacaacatctcgacaaggttcat |
4379213 |
T |
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