View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8771_high_11 (Length: 292)
Name: NF8771_high_11
Description: NF8771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8771_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 33922018 - 33922301
Alignment:
| Q |
1 |
tcatggttaaactggtgttgatgagtaggagatgattggttgaagtgagacgggcatgacttgaatggttaaattagtgttaagtatgacttgactgtca |
100 |
Q |
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|||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33922018 |
tcatagttaaactggtgttgatgagtaggggatgataggttgaagtgagacgggcatgacttgaatggttaaattagtgttaagtatgacttgactgtca |
33922117 |
T |
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| Q |
101 |
cactaaaatattagaggtc-acgtggtatagtcgtccataccaatccaccaaacctcgaacatattaa--gacatagacattcgttctttatcgggtcgg |
197 |
Q |
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||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
33922118 |
cactaaaatattagagggccacgtggtatagtcgtccataccaatccaccgaacctcgaacatattaaaagacatagacattcgttctttatcgggtcgg |
33922217 |
T |
|
| Q |
198 |
catgtaccgatcgagtttgttgcaaagaaacaaagtcacgagtacaaggggttggattctcgatgcattgtggatcatgatgtc |
281 |
Q |
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||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33922218 |
catctaccaatcgagtttgttgcaaagaaacaaagtcacgagtacaaggggttggattctcgatgcattgtggatcatgatgtc |
33922301 |
T |
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