View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8771_low_10 (Length: 338)

Name: NF8771_low_10
Description: NF8771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8771_low_10
NF8771_low_10
[»] chr6 (27 HSPs)
chr6 (42-324)||(8626481-8626762)
chr6 (43-312)||(13757208-13757475)
chr6 (43-323)||(1605579-1605857)
chr6 (43-321)||(29260192-29260469)
chr6 (43-321)||(7761301-7761577)
chr6 (50-321)||(30734483-30734753)
chr6 (42-321)||(4129434-4129703)
chr6 (43-323)||(15064693-15064971)
chr6 (58-322)||(8235639-8235903)
chr6 (58-321)||(31559738-31559998)
chr6 (43-322)||(17942443-17942721)
chr6 (47-151)||(30734779-30734881)
chr6 (187-322)||(20398237-20398372)
chr6 (91-309)||(3798151-3798364)
chr6 (92-247)||(14287038-14287190)
chr6 (213-322)||(1814762-1814871)
chr6 (94-151)||(21277603-21277659)
chr6 (187-311)||(26860907-26861031)
chr6 (43-96)||(19996715-19996768)
chr6 (197-263)||(847834-847900)
chr6 (94-175)||(11370630-11370711)
chr6 (187-262)||(31244876-31244951)
chr6 (215-248)||(879317-879350)
chr6 (43-84)||(19996322-19996363)
chr6 (43-71)||(22054772-22054800)
chr6 (187-263)||(26470850-26470926)
chr6 (98-134)||(33845469-33845505)
[»] chr2 (27 HSPs)
chr2 (44-324)||(23366790-23367069)
chr2 (43-323)||(3518908-3519186)
chr2 (43-325)||(1102503-1102782)
chr2 (43-324)||(39938170-39938450)
chr2 (43-312)||(37673752-37674014)
chr2 (43-321)||(12969740-12970016)
chr2 (71-321)||(1646317-1646564)
chr2 (123-322)||(22388137-22388332)
chr2 (208-321)||(40756911-40757024)
chr2 (97-321)||(39561895-39562108)
chr2 (91-292)||(19976380-19976576)
chr2 (196-324)||(28110092-28110220)
chr2 (96-284)||(14779832-14780015)
chr2 (188-260)||(28401396-28401468)
chr2 (212-312)||(36447426-36447526)
chr2 (188-284)||(37284555-37284650)
chr2 (191-321)||(4917908-4918038)
chr2 (91-165)||(35179090-35179164)
chr2 (43-96)||(34224378-34224431)
chr2 (187-291)||(34242117-34242221)
chr2 (228-284)||(32838966-32839022)
chr2 (46-263)||(1002789-1003004)
chr2 (91-175)||(18078104-18078188)
chr2 (187-262)||(43077331-43077406)
chr2 (208-266)||(32323688-32323746)
chr2 (94-128)||(32840367-32840401)
chr2 (43-71)||(44365157-44365185)
[»] chr1 (44 HSPs)
chr1 (43-323)||(40783655-40783934)
chr1 (42-321)||(23045279-23045557)
chr1 (42-321)||(321625-321903)
chr1 (42-324)||(284332-284613)
chr1 (54-322)||(23526251-23526517)
chr1 (50-321)||(47037852-47038120)
chr1 (43-317)||(46771637-46771911)
chr1 (38-325)||(24771902-24772187)
chr1 (39-312)||(27210964-27211245)
chr1 (63-328)||(33082765-33083028)
chr1 (42-311)||(51064764-51065034)
chr1 (97-310)||(18396749-18396960)
chr1 (91-311)||(31003797-31004012)
chr1 (91-284)||(40261322-40261501)
chr1 (190-324)||(40562283-40562416)
chr1 (93-309)||(27143026-27143239)
chr1 (111-312)||(31061465-31061662)
chr1 (91-252)||(3657125-3657282)
chr1 (188-285)||(40052500-40052597)
chr1 (94-263)||(1837886-1838053)
chr1 (50-171)||(1749314-1749435)
chr1 (91-284)||(34458761-34458950)
chr1 (189-312)||(23166860-23166983)
chr1 (58-175)||(52037267-52037382)
chr1 (190-318)||(14925610-14925736)
chr1 (197-304)||(24876714-24876821)
chr1 (91-249)||(52478016-52478170)
chr1 (227-284)||(1749457-1749514)
chr1 (43-96)||(3943060-3943113)
chr1 (43-96)||(9588670-9588723)
chr1 (50-96)||(13984991-13985037)
chr1 (194-312)||(25929248-25929366)
chr1 (42-96)||(41959077-41959131)
chr1 (102-177)||(7765072-7765147)
chr1 (49-96)||(44228228-44228275)
chr1 (230-284)||(14350511-14350565)
chr1 (51-96)||(1168369-1168414)
chr1 (43-84)||(44227848-44227889)
chr1 (36-75)||(10845474-10845513)
chr1 (190-248)||(49756684-49756742)
chr1 (43-84)||(3943763-3943804)
chr1 (103-168)||(40562733-40562797)
chr1 (43-84)||(41959809-41959850)
chr1 (57-109)||(40564241-40564293)
[»] chr8 (33 HSPs)
chr8 (50-321)||(7146920-7147190)
chr8 (49-312)||(2539939-2540202)
chr8 (42-312)||(37345570-37345839)
chr8 (43-321)||(40058303-40058580)
chr8 (43-323)||(11174221-11174500)
chr8 (42-325)||(43275395-43275675)
chr8 (43-321)||(40918731-40919006)
chr8 (43-323)||(11646323-11646602)
chr8 (43-312)||(3585451-3585719)
chr8 (50-323)||(30999522-30999791)
chr8 (42-322)||(36068079-36068358)
chr8 (42-322)||(27034996-27035273)
chr8 (42-306)||(20546308-20546565)
chr8 (50-312)||(35866621-35866881)
chr8 (49-310)||(28567925-28568184)
chr8 (49-310)||(28575518-28575777)
chr8 (188-303)||(27563885-27564000)
chr8 (97-284)||(13880992-13881178)
chr8 (49-324)||(28562427-28562701)
chr8 (187-321)||(26628816-26628950)
chr8 (189-321)||(45400770-45400902)
chr8 (91-245)||(28326734-28326883)
chr8 (41-96)||(40486453-40486508)
chr8 (208-281)||(10180908-10180981)
chr8 (42-96)||(45278701-45278755)
chr8 (43-96)||(8697898-8697951)
chr8 (93-284)||(30906726-30906917)
chr8 (43-96)||(41307961-41308014)
chr8 (49-96)||(10646598-10646645)
chr8 (102-175)||(10181002-10181074)
chr8 (43-84)||(41305762-41305803)
chr8 (97-249)||(39151460-39151607)
chr8 (42-71)||(40494383-40494412)
[»] chr4 (33 HSPs)
chr4 (43-312)||(40122496-40122762)
chr4 (50-323)||(22321266-22321537)
chr4 (43-323)||(25704651-25704930)
chr4 (50-323)||(44568844-44569116)
chr4 (43-322)||(21310425-21310699)
chr4 (50-322)||(24706246-24706517)
chr4 (43-312)||(21661544-21661812)
chr4 (43-312)||(21670308-21670576)
chr4 (43-322)||(14261044-14261322)
chr4 (43-321)||(12071561-12071837)
chr4 (50-311)||(50767871-50768129)
chr4 (42-325)||(20249010-20249290)
chr4 (43-251)||(34324653-34324860)
chr4 (49-305)||(31892244-31892493)
chr4 (91-304)||(19692771-19692982)
chr4 (91-304)||(19703356-19703567)
chr4 (134-312)||(21064851-21065029)
chr4 (98-324)||(18507263-18507484)
chr4 (93-321)||(6128949-6129175)
chr4 (94-311)||(32543532-32543746)
chr4 (91-244)||(20714426-20714577)
chr4 (227-310)||(50839042-50839125)
chr4 (73-151)||(1988065-1988143)
chr4 (42-172)||(26676714-26676844)
chr4 (190-284)||(48652370-48652464)
chr4 (187-260)||(1146176-1146249)
chr4 (91-128)||(48652268-48652305)
chr4 (187-262)||(30939197-30939272)
chr4 (188-263)||(38617857-38617932)
chr4 (58-96)||(19361662-19361700)
chr4 (211-244)||(17038377-17038410)
chr4 (228-292)||(20714349-20714413)
chr4 (226-262)||(26906555-26906591)
[»] chr5 (25 HSPs)
chr5 (43-323)||(12806851-12807130)
chr5 (43-312)||(25773649-25773917)
chr5 (42-322)||(30720491-30720770)
chr5 (50-321)||(40886610-40886880)
chr5 (50-321)||(36561099-36561369)
chr5 (43-322)||(10285057-10285334)
chr5 (43-312)||(37900632-37900901)
chr5 (89-321)||(25683229-25683459)
chr5 (43-311)||(16983258-16983524)
chr5 (188-312)||(23097733-23097857)
chr5 (54-258)||(7277486-7277688)
chr5 (49-312)||(734348-734608)
chr5 (49-324)||(11319565-11319836)
chr5 (94-310)||(16054165-16054377)
chr5 (43-309)||(39070883-39071147)
chr5 (91-302)||(30402981-30403191)
chr5 (188-322)||(1056624-1056756)
chr5 (212-290)||(11795314-11795392)
chr5 (211-292)||(26168075-26168156)
chr5 (50-168)||(23098386-23098496)
chr5 (192-263)||(11797694-11797765)
chr5 (43-92)||(15305216-15305265)
chr5 (43-152)||(11796451-11796560)
chr5 (207-248)||(12305687-12305728)
chr5 (187-262)||(25785928-25786003)
[»] chr7 (27 HSPs)
chr7 (43-310)||(10981508-10981774)
chr7 (43-322)||(27813811-27814089)
chr7 (49-312)||(36453133-36453395)
chr7 (50-322)||(40348967-40349239)
chr7 (42-323)||(47110450-47110729)
chr7 (50-322)||(25614352-25614621)
chr7 (91-284)||(3091565-3091753)
chr7 (93-310)||(16662146-16662359)
chr7 (93-310)||(17636506-17636719)
chr7 (192-281)||(27941024-27941113)
chr7 (91-263)||(3498813-3498983)
chr7 (188-284)||(24456802-24456898)
chr7 (91-284)||(7743435-7743625)
chr7 (43-96)||(25060133-25060186)
chr7 (188-264)||(8380082-8380158)
chr7 (97-263)||(16360438-16360596)
chr7 (103-175)||(27942184-27942256)
chr7 (43-96)||(2911548-2911601)
chr7 (46-127)||(8379945-8380026)
chr7 (93-175)||(37983206-37983284)
chr7 (206-266)||(6737252-6737312)
chr7 (97-128)||(24456927-24456958)
chr7 (187-262)||(46563252-46563327)
chr7 (43-84)||(2910859-2910900)
chr7 (43-84)||(25059450-25059491)
chr7 (43-71)||(25566781-25566809)
chr7 (208-248)||(41480639-41480679)
[»] chr3 (50 HSPs)
chr3 (42-321)||(46694110-46694388)
chr3 (43-321)||(13364843-13365120)
chr3 (40-322)||(23087930-23088211)
chr3 (50-314)||(3383083-3383346)
chr3 (42-310)||(198854-199121)
chr3 (43-322)||(29375138-29375410)
chr3 (42-322)||(36881281-36881558)
chr3 (43-322)||(19241667-19241945)
chr3 (43-306)||(43750137-43750398)
chr3 (212-323)||(48820508-48820619)
chr3 (188-312)||(13703356-13703480)
chr3 (187-321)||(18355868-18356002)
chr3 (187-321)||(32834989-32835123)
chr3 (131-311)||(27706999-27707177)
chr3 (187-298)||(31873886-31873996)
chr3 (50-147)||(32835129-32835226)
chr3 (187-309)||(48963262-48963384)
chr3 (188-310)||(48436368-48436490)
chr3 (188-316)||(54086696-54086824)
chr3 (43-122)||(27707362-27707441)
chr3 (94-260)||(37780988-37781152)
chr3 (188-263)||(52009108-52009183)
chr3 (58-164)||(13702784-13702890)
chr3 (97-321)||(24064278-24064497)
chr3 (236-322)||(26783661-26783747)
chr3 (208-312)||(6901725-6901828)
chr3 (95-175)||(19897072-19897152)
chr3 (93-285)||(53559647-53559837)
chr3 (43-96)||(12094582-12094635)
chr3 (94-284)||(1455188-1455374)
chr3 (42-96)||(19911508-19911562)
chr3 (43-128)||(37293437-37293522)
chr3 (43-96)||(44277455-44277508)
chr3 (60-128)||(48820444-48820512)
chr3 (187-280)||(37293554-37293644)
chr3 (93-171)||(44522491-44522567)
chr3 (42-84)||(44276774-44276816)
chr3 (187-245)||(46188909-46188967)
chr3 (43-112)||(48963156-48963223)
chr3 (193-263)||(52805085-52805155)
chr3 (43-96)||(38805245-38805298)
chr3 (188-245)||(40228280-40228337)
chr3 (109-172)||(17755221-17755284)
chr3 (109-172)||(19056541-19056604)
chr3 (187-262)||(23771326-23771401)
chr3 (187-262)||(32980679-32980754)
chr3 (188-262)||(43159893-43159967)
chr3 (43-84)||(19912174-19912215)
chr3 (42-71)||(21797555-21797584)
chr3 (43-84)||(38806341-38806382)
[»] scaffold1770 (1 HSPs)
scaffold1770 (42-321)||(169-438)
[»] scaffold0054 (1 HSPs)
scaffold0054 (43-321)||(45454-45730)
[»] scaffold1431 (1 HSPs)
scaffold1431 (43-219)||(1-176)
[»] scaffold0062 (1 HSPs)
scaffold0062 (58-301)||(287-525)
[»] scaffold0343 (1 HSPs)
scaffold0343 (188-311)||(6911-7033)
[»] scaffold0168 (1 HSPs)
scaffold0168 (187-311)||(7811-7935)
[»] scaffold0025 (1 HSPs)
scaffold0025 (109-284)||(65202-65375)
[»] scaffold0056 (2 HSPs)
scaffold0056 (93-175)||(70874-70956)
scaffold0056 (187-311)||(71226-71350)
[»] scaffold0257 (1 HSPs)
scaffold0257 (43-96)||(23467-23520)
[»] scaffold0076 (1 HSPs)
scaffold0076 (188-258)||(15386-15456)
[»] scaffold0003 (1 HSPs)
scaffold0003 (187-262)||(252633-252708)
[»] scaffold0009 (1 HSPs)
scaffold0009 (195-262)||(147263-147330)


Alignment Details
Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 42 - 324
Target Start/End: Original strand, 8626481 - 8626762
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  8626481 ttactccctccgtttcaaaatacatgtccattttgaagaaattgcattaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 8626580  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8626581 ttctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 8626679  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatta 324  Q
    |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  8626680 cattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatta 8626762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 43 - 312
Target Start/End: Original strand, 13757208 - 13757475
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    |||||||||||||||||||||||||||||||||| ||||||| |  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  13757208 tactctctccgtttcaaaatacatgtccattttggagaaattacactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 13757307  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || || ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13757308 tctataatacccttaatcaattattatttcattttatttttt--ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 13757405  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  13757406 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacg 13757475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 43 - 323
Target Start/End: Original strand, 1605579 - 1605857
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  1605579 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 1605678  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1605679 tctataatacccttaatcatttattatttcattttatttttt--ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgt 1605776  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatt 323  Q
    ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  1605777 attgaaatttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatt 1605857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 43 - 321
Target Start/End: Original strand, 29260192 - 29260469
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  29260192 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 29260291  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  29260292 tctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgtaagggtattattgacaagacagtaattaatgttgc 29260390  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||| |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  29260391 attgaaacttgaaaatgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 29260469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 43 - 321
Target Start/End: Original strand, 7761301 - 7761577
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  |||||||||||  |||||||||||||||||||| ||||||||||||||||  ||    
T  7761301 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaactaaataaattttgttatttttgatgaaaatatgtgtgt--tt 7761398  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  7761399 tctataatacccttaatcatttattatttcattttatttttttcctctctctacaataaatatgcaagggtattattgacaaaataataattaatattgc 7761498  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  7761499 attgaaacttgaaagtgacaaatattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 7761577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 50 - 321
Target Start/End: Complemental strand, 30734753 - 30734483
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30734753 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 30734654  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  30734653 tacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgataagataataattaatgttgcattgaaa 30734555  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
     |||||| |||||| |||||| |||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  30734554 tttgaaaatgacaactattgtaaaacaaaattattttccaaaatggacaagtattatgaaaaggaggaagta 30734483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 42 - 321
Target Start/End: Original strand, 4129434 - 4129703
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||||||||||| |||| |||| ||||||||| ||||||||        ||||||||||||||||||||||||||||||||||||||    
T  4129434 ttactccctccgtttcaaaatacatatccactttggagaaattgcagtaaccaa--------ataaattttgttattttttatgaaaatatgtgtgtgtt 4129525  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4129526 ttctataatacccttaaccatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaata-ttaatgttg 4129623  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  4129624 cattgaaacttgaaagtgacaagtattgtgaaacaaaattattttctaaaatggacaagtattatgaaacggagggagta 4129703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 43 - 323
Target Start/End: Complemental strand, 15064971 - 15064693
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| | |||||||||| ||||||||||||||||||||| |||||| |||||||||||||    
T  15064971 tactccctccgtttcaaaatacatgtccattttagagaaattgcagcaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtgttt 15064872  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    | |||| || ||| ||||||||||||||| ||| ||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15064871 tttatactacccttaaccatttattatttgattatatttttt--ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgt 15064774  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatt 323  Q
    ||||||||||||||||||||| |||| ||||||||||||||| || |||||||||||||||||||||||| ||| ||||||    
T  15064773 attgaaacttgaaagtgacaagtattatgaaacaaaattattctccaaaatggacaagtattatgaaacggagggagtatt 15064693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 58 - 322
Target Start/End: Original strand, 8235639 - 8235903
Alignment:
Q  58 aaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctca 157  Q
    ||||||||||| ||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||| | |||||||||||||||||||||| ||| |    
T  8235639 aaaatacatgtacattttgaagaaattgcagtaaccaagaaacgaaataaaatttgttattttttatgatattatgtgtgtgttttctataataccctta 8235738  T
Q  158 accatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaag 257  Q
    | |||||||||||||||| ||         ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  8235739 atcatttattatttcattctattttttttatctctctacaataaatatgtaagggtattattgataagacaataattaatattgcattgaaacttgaaag 8235838  T
Q  258 tgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    |||||| |||||||||||||||||||| |||||||| |||||||||||||||||| | |||||||    
T  8235839 tgacaagtattgtgaaacaaaattattctctaaaatagacaagtattatgaaacggatgaagtat 8235903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 58 - 321
Target Start/End: Complemental strand, 31559998 - 31559738
Alignment:
Q  58 aaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctca 157  Q
    ||||||||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||| |    
T  31559998 aaaatacatgtccattttggagaaattgcattaaccaaaaaatcaaataaattttgttatttttgatgaaaatatgtgtatgttttctgtaataccctta 31559899  T
Q  158 accatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaag 257  Q
    | ||||||||||||||||||         ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31559898 atcatttattatttcatttt---ttttttctctctctacaataaatatgcaagggtattattaacaagacaataattaatgttgcattgaaacttgaaag 31559802  T
Q  258 tgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    | |||| |||||| ||| ||||||||| ||||||||||| ||||||||||||||| ||| ||||    
T  31559801 taacaagtattgtaaaataaaattattctctaaaatggagaagtattatgaaacggagggagta 31559738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 43 - 322
Target Start/End: Original strand, 17942443 - 17942721
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgtt--attttttatgaaaatatgtgtgtgt 140  Q
    ||||| || ||||||||||||||||||||||||  ||||||||| |||||||||||| ||||||  |||| ||  |||||| |||||| |||||| ||||    
T  17942443 tactcccttcgtttcaaaatacatgtccatttttgagaaattgcagtaaccaagaaaccaaatatttttttttttatttttgatgaaattatgtgcgtgt 17942542  T
Q  141 tttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgtt 240  Q
    | ||||||||| ||| ||||||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  17942543 tctctataatacccttaaccatttattatttcattttatttttt---tctctctacaataaatatgtaagggtattattgacaaaacaataattaatgtt 17942639  T
Q  241 gcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    ||||||||||||||||||||||| |||| | ||||||||||||| || |||||||||||||||||||||||| ||| |||||    
T  17942640 gcattgaaacttgaaagtgacaagtattataaaacaaaattattctccaaaatggacaagtattatgaaacggagggagtat 17942721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 30734881 - 30734779
Alignment:
Q  47 ctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttcta 146  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||| |||||| ||  |||||||||||||    
T  30734881 ctctccgtttcaaaatacatgtccattttgaagaaattgcagtaacaaaaaaatcaaataaattttgttatttttgatgaaatta--tgtgtgttttcta 30734784  T
Q  147 taata 151  Q
    |||||    
T  30734783 taata 30734779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 187 - 322
Target Start/End: Complemental strand, 20398372 - 20398237
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatttt 286  Q
    |||||| || |||||||| | |||||||||||||||||   |||||||||||||||||| ||||||||||||| ||| ||  ||||||||||||||||||    
T  20398372 ctctctgtataataaataggtaagggtattattgacaatttaataattaatgttgcattaaaacttgaaagtggcaagtaaagtgaaacaaaattatttt 20398273  T
Q  287 ctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    | ||||  |||| ||||| ||||||||||| |||||    
T  20398272 ccaaaagtgacatgtattgtgaaacgaagggagtat 20398237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 309
Target Start/End: Original strand, 3798151 - 3798364
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    ||||| ||||||||||||||||||||||||| |||||  ||| ||||| |||||||||| | ||| |  |||||||||||||| | ||         |||    
T  3798151 accaaaaaatcaaataaattttgttatttttcatgaagttatttgtgttttttctataacacccttacacatttattatttcaatatattatt----tct 3798246  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaa 290  Q
     |||| |||||||| | |||||||||||||| ||    ||||||||||||||||| ||||||||||||||||| ||  ||||||||||| |||| | |||    
T  3798247 -tctataataaataggtaagggtattattgataaactcataattaatgttgcattaaaacttgaaagtgacaagtaaagtgaaacaaaactattatttaa 3798345  T
Q  291 aatggacaagtattatgaa 309  Q
    ||  ||||  |||||||||    
T  3798346 aaacgacatatattatgaa 3798364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 247
Target Start/End: Original strand, 14287038 - 14287190
Alignment:
Q  92 ccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctc 191  Q
    |||| |||||||||||||||||||||||||||||||| | ||||  | |||||||||||| ||| | || |||||||||||||||||         ||||    
T  14287038 ccaataaatcaaataaattttgttattttttatgaaattctgtg-cttttttctataatacccttacccctttattatttcattttattattta--tctc 14287134  T
Q  192 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattga 247  Q
    |||||||||| || | ||| ||||||| || ||  ||||||||| |||||||||||    
T  14287135 tctacaataactaggtaagagtattatggataaatcaataattagtgttgcattga 14287190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 1814762 - 1814871
Alignment:
Q  213 tattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    ||||||||||||  ||||||| |||||||||||| || || |||||||||| ||  |||||| ||||||||| |  ||||  |||| ||||| |||||||    
T  1814762 tattattgacaaaccaataatcaatgttgcattggaaattaaaagtgacaagtaaagtgaaataaaattattcttcaaaagtgacatgtattgtgaaacg 1814861  T
Q  313 aaggaagtat 322  Q
    ||||||||||    
T  1814862 aaggaagtat 1814871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 21277659 - 21277603
Alignment:
Q  94 aagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataata 151  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  21277659 aagaaatcaaataaattttgttattttttatgaaaatttatgtgt-ttttctataata 21277603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 26860907 - 26861031
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatttt 286  Q
    ||||||||  |||||||| | || ||||||||||||||  ||||||| ||||||| |||||||| ||||| |||||| ||  |||||||||| ||||| |    
T  26860907 ctctctctgtaataaataggtaaaggtattattgacaaatcaataatcaatgttgtattgaaacatgaaaatgacaagtaaagtgaaacaaacttattct 26861006  T
Q  287 ctaaaatggacaagtattatgaaac 311  Q
    | ||||  |||| ||||| ||||||    
T  26861007 ccaaaaatgacatgtattgtgaaac 26861031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 19996768 - 19996715
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  19996768 tactccctccgtttcaaaatacatgtctattttggagaaattgcagtaaccaag 19996715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 847900 - 847834
Alignment:
Q  197 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 263  Q
    |||||||||  ||| |||||||||||||  ||||||||||||||||||||||  |||||| ||||||    
T  847900 aataaatatttaagagtattattgacaaagcaataattaatgttgcattgaactttgaaaatgacaa 847834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 11370711 - 11370630
Alignment:
Q  94 aagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcatt 175  Q
    |||||||||||||||||||||||||||| |||| | |   ||||| |||| |||||||  || |||||||||||||| ||||    
T  11370711 aagaaatcaaataaattttgttatttttgatgatattcattgtgttttttttataatactcttaaccatttattattccatt 11370630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 31244876 - 31244951
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 262  Q
    ||||||| |||||||||||  |||  || |||||| || |||| ||||||||||||||||||  ||||||||||||    
T  31244876 ctctctccacaataaatatctaagaataatattgataaaacaagaattaatgttgcattgaactttgaaagtgaca 31244951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 879350 - 879317
Alignment:
Q  215 ttattgacaagacaataattaatgttgcattgaa 248  Q
    |||||||||| |||||||||||||||||||||||    
T  879350 ttattgacaaaacaataattaatgttgcattgaa 879317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 19996322 - 19996363
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaatt 84  Q
    ||||| |||||||||||||||||||||||||||  |||||||    
T  19996322 tactccctccgtttcaaaatacatgtccattttagagaaatt 19996363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 71
Target Start/End: Original strand, 22054772 - 22054800
Alignment:
Q  43 tactctctccgtttcaaaatacatgtcca 71  Q
    |||||||||||||||||||||||||||||    
T  22054772 tactctctccgtttcaaaatacatgtcca 22054800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 26470850 - 26470926
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 263  Q
    ||||||| ||||||||||   |||| || ||||| ||| |||| | ||||||||||||||||  |||||||||||||    
T  26470850 ctctctccacaataaataactaaggataatattggcaaaacaacatttaatgttgcattgaactttgaaagtgacaa 26470926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 33845505 - 33845469
Alignment:
Q  98 aatcaaataaattttgttattttttatgaaaatatgt 134  Q
    |||||||||||||||||||||||| |||||| |||||    
T  33845505 aatcaaataaattttgttatttttgatgaaattatgt 33845469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 44 - 324
Target Start/End: Original strand, 23366790 - 23367069
Alignment:
Q  44 actctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtttt 143  Q
    |||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23366790 actccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttttatgaaaatatgtgtgtgtttt 23366889  T
Q  144 ctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgca 243  Q
    |||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23366890 ctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgta 23366988  T
Q  244 ttgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatta 324  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  23366989 ttgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatta 23367069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 43 - 323
Target Start/End: Original strand, 3518908 - 3519186
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  3518908 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 3519007  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| ||  ||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3519008 tctataatacccttaataatttattatttcattttatttttt--ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttac 3519105  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatt 323  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  3519106 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggaggaagtatt 3519186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 43 - 325
Target Start/End: Original strand, 1102503 - 1102782
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  1102503 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 1102602  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| ||||||||||||||||||||||         |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1102603 tctataatacccttaaccatttattatttcattttatttttt---tctctctacaataaatatgcaagggtgttattgacaagacaataattaatgttgc 1102699  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtattat 325  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||    
T  1102700 attgaaacttgaaagtgacgagtattgtgaaacaaaattattctctcaaatggacaagtattatgaaacggagggagtattat 1102782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 43 - 324
Target Start/End: Original strand, 39938170 - 39938450
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  39938170 tactccctccgtttcaaaatacatgaccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 39938269  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39938270 tctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 39938368  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatta 324  Q
    ||| |||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| ||| |||||||    
T  39938369 attaaaacttaaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattataaaacggagggagtatta 39938450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 43 - 312
Target Start/End: Complemental strand, 37674014 - 37673752
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37674014 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 37673915  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||  |||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37673914 tctataatacccttaatcatttattatt--attttttttt-----tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 37673822  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    ||||||||||| ||||||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  37673821 attgaaacttggaagtgacaagtattttgaaacaaagttattctctaaaatggacaagtattatgaaacg 37673752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 43 - 321
Target Start/End: Complemental strand, 12970016 - 12969740
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| |||||| ||||||| | |||    
T  12970016 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtatattt 12969917  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| ||||||||||||||| ||| ||        |||||||||||||||||||  |||||||||||||| ||||||||||||||| ||||    
T  12969916 tctataatacccttaaccatttattattttattctatttttt--ctctctctacaataaatatttaagggtattattgagaagacaataattaatattgc 12969819  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    ||||||||||||||| ||||  |||||||||||||||||||| || |||||||||||||||||||||||| ||| ||||    
T  12969818 attgaaacttgaaagagacatgtattgtgaaacaaaattattctccaaaatggacaagtattatgaaacggagggagta 12969740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 71 - 321
Target Start/End: Original strand, 1646317 - 1646564
Alignment:
Q  71 attttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatt 170  Q
    |||||| ||||||||| | ||||||||||  |||||||||||||||||||| ||||||||||||||||  ||||||||||| ||| || |||||||||||    
T  1646317 attttggagaaattgcagcaaccaagaaactaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataatacccttaatcatttattatt 1646414  T
Q  171 tcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgt 270  Q
    ||||||||        |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| || ||||||    
T  1646415 tcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagataatacttaatgttgcattgaaacttgaaagtgataagtattgt 1646513  T
Q  271 gaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||| ||||    
T  1646514 gaaacaaaattattctctaaaatggacaggtattatgaaacggagggagta 1646564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 123 - 322
Target Start/End: Complemental strand, 22388332 - 22388137
Alignment:
Q  123 atgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgac 222  Q
    ||||||||||||||||||||||||||||| ||| || |||||||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  22388332 atgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcattttattttt----tctctctacaataaatatgcaagggtattattgac 22388237  T
Q  223 aagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  22388236 aagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 22388137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 208 - 321
Target Start/End: Complemental strand, 40757024 - 40756911
Alignment:
Q  208 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatg 307  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| || |||||||||||||||||||    
T  40757024 aagggtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaactaaagtgaaacaaaattattctccaaaatggacaagtattatg 40756925  T
Q  308 aaacgaaggaagta 321  Q
    ||||| ||| ||||    
T  40756924 aaacggagggagta 40756911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 97 - 321
Target Start/End: Complemental strand, 39562108 - 39561895
Alignment:
Q  97 aaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctac 196  Q
    ||||||||||||||||||||||||| | |||| ||| | ||| |||||||  ||| ||| ||||||||||||||  ||| ||         |||||||||    
T  39562108 aaatcaaataaattttgttatttttgaagaaattatttttgttttttcta--atacccttaaccatttattattgtattctattatt----tctctctac 39562015  T
Q  197 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatgga 296  Q
    |||||||| | |||||||||||||||||  ||||||||||||||||||||||| || ||||||||||     |||||||||||||||| || ||||  ||    
T  39562014 aataaataagtaagggtattattgacaaaccaataattaatgttgcattgaaatttaaaagtgacaa-----gtgaaacaaaattattctccaaaaacga 39561920  T
Q  297 caagtattatgaaacgaaggaagta 321  Q
    || ||||| ||||||| ||| ||||    
T  39561919 catgtattgtgaaacggagggagta 39561895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 91 - 292
Target Start/End: Original strand, 19976380 - 19976576
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    ||||||||||||||||||||||| || |||| || ||| ||||||| | |||||||||||| ||| | | ||||||||||| ||| ||        ||||    
T  19976380 accaagaaatcaaataaattttggtacttttgataaaattatgtgttt-ttttctataatacccttacctatttattattttattatattat----ctct 19976474  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaa 290  Q
    ||||||||||||||   || | ||||||||| ||   |||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||| ||    
T  19976475 ctctacaataaatagataatgatattattgataaactaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattttccaa 19976574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 28110220 - 28110092
Alignment:
Q  196 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatgg 295  Q
    ||||||||||| |||||||||||||| ||  |||||||||||||||||||||||||||||| |||||| || ||||||||||  || || || ||||  |    
T  28110220 caataaatatgtaagggtattattgataaaccaataattaatgttgcattgaaacttgaaaatgacaagtaatgtgaaacaagttttttctccaaaaacg 28110121  T
Q  296 acaagtattatgaaacgaaggaagtatta 324  Q
    | || |||| ||||||| |||||||||||    
T  28110120 ataaatattgtgaaacggaggaagtatta 28110092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 284
Target Start/End: Original strand, 14779832 - 14780015
Alignment:
Q  96 gaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctcta 195  Q
    ||||| ||||||||||| |||||||| |||||| ||| ||||| ||||||||||||  || |  |||||||||||||||| ||        || ||||||    
T  14779832 gaaattaaataaatttttttatttttgatgaaattatttgtgttttttctataata--cttactcatttattatttcattata--ttatttctttctcta 14779927  T
Q  196 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    || |||||| ||||||||||| || ||||   |||  ||||| ||||||||||||||||||||||||| ||   |||||||||||||||    
T  14779928 cagtaaataggcaagggtatt-ttaacaaacaaatcgttaatcttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 14780015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 28401468 - 28401396
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtga 260  Q
    ||||| |||||||| || |||||||||||||||||||  ||||||||||||| || |||||||||||||||||    
T  28401468 tctctttacaataattaggcaagggtattattgacaaatcaataattaatgtggccttgaaacttgaaagtga 28401396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 312
Target Start/End: Original strand, 36447426 - 36447526
Alignment:
Q  212 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaac 311  Q
    |||||||||| ||  ||||||||||  ||||||||||| ||||||||||| ||||  |||||||||||||||| |||||||  |||| ||||| ||||||    
T  36447426 gtattattgataaaccaataattaacattgcattgaaatttgaaagtgacgaataaagtgaaacaaaattattctctaaaagcgacatgtattgtgaaac 36447525  T
Q  312 g 312  Q
    |    
T  36447526 g 36447526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 37284650 - 37284555
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    ||||||||||||||||| | ||| |||||| ||| ||  ||||||| |||||||||||||||||||||| |||||| ||  ||||||||||||||||    
T  37284650 tctctctacaataaataggtaagagtattagtgataaatcaataat-aatgttgcattgaaacttgaaaatgacaagtaaagtgaaacaaaattatt 37284555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 321
Target Start/End: Original strand, 4917908 - 4918038
Alignment:
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaa 290  Q
    |||||| ||||||| | ||||| | |||||||||| ||||||||||||||| ||| ||| | ||||||||||| || |||||| ||||||| ||||  ||    
T  4917908 ctctaccataaataggtaagggaactattgacaagccaataattaatgttgaattaaaattcgaaagtgacaagtaatgtgaagcaaaattgtttttcaa 4918007  T
Q  291 aatggacaagtattatgaaacgaaggaagta 321  Q
    ||  ||||| |||| ||||||| | ||||||    
T  4918008 aaatgacaaatattgtgaaacggatgaagta 4918038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 35179164 - 35179090
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccattta 165  Q
    |||||||||| |||||||||||||||||||| |||||| | ||||||| |||||||||||| ||| ||| |||||    
T  35179164 accaagaaatgaaataaattttgttatttttgatgaaattttgtgtgttttttctataataaccttaactattta 35179090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 34224431 - 34224378
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  34224431 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 34224378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 34242117 - 34242221
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatttt 286  Q
    |||||||||||||||||| | |||| ||||||||| ||  ||||| ||||| ||||||| |||||| |||||||| | ||   ||||||||||||||| |    
T  34242117 ctctctctacaataaataggtaaggatattattgataaaccaatatttaatattgcattaaaacttaaaagtgaccagtaaaatgaaacaaaattattct 34242216  T
Q  287 ctaaa 291  Q
    |||||    
T  34242217 ctaaa 34242221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 32839022 - 32838966
Alignment:
Q  228 aataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    |||||||||| ||||||||||||||||||||||||| ||   |||||||||||||||    
T  32839022 aataattaatattgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 32838966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 263
Target Start/End: Complemental strand, 1003004 - 1002789
Alignment:
Q  46 tctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttct 145  Q
    |||||| |||||||||||||||||  |||||| || ||| |    || ||||||||||||||||||| |||||||| |||||| |   | ||| |||||     
T  1003004 tctctctgtttcaaaatacatgtcgcttttgaggatattacacatactaagaaatcaaataaattttattatttttgatgaaattccttttgttttttcg 1002905  T
Q  146 ataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 245  Q
    | |||| | | |  |||||||||||||||| ||        ||||||||||||||||||   |||| ||| ||| | ||  |||||||||||||||||||    
T  1002904 acaataacattactcatttattatttcattctattattt--ctctctctacaataaatagataaggatataattaataaaccaataattaatgttgcatt 1002807  T
Q  246 gaaacttgaaagtgacaa 263  Q
    || | |||||| ||||||    
T  1002806 gagatttgaaaatgacaa 1002789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 18078104 - 18078188
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcatt 175  Q
    ||||| ||||||||||||||||||||||||| |||||  | | ||||  ||||||||||||  ||  ||||||||||| ||||||    
T  18078104 accaaaaaatcaaataaattttgttatttttgatgaatttttttgtggattttctataatactcttgaccatttattaattcatt 18078188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 43077406 - 43077331
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 262  Q
    |||||||  ||||||||||  ||||||| |||||  || |||||| ||||||||||||||||  ||||||||||||    
T  43077406 ctctctccgcaataaatatctaagggtaatattggtaaaacaatatttaatgttgcattgaactttgaaagtgaca 43077331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 32323746 - 32323688
Alignment:
Q  208 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaata 266  Q
    ||||||||| ||||||| ||||||||| |||||||||||||  ||||||  ||||||||    
T  32323746 aagggtatttttgacaaaacaataattgatgttgcattgaactttgaaaacgacaaata 32323688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 32840401 - 32840367
Alignment:
Q  94 aagaaatcaaataaattttgttattttttatgaaa 128  Q
    |||||||||||||||||||||||||||| ||||||    
T  32840401 aagaaatcaaataaattttgttatttttgatgaaa 32840367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 71
Target Start/End: Original strand, 44365157 - 44365185
Alignment:
Q  43 tactctctccgtttcaaaatacatgtcca 71  Q
    |||||||||||||||||||||||||||||    
T  44365157 tactctctccgtttcaaaatacatgtcca 44365185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 43 - 323
Target Start/End: Complemental strand, 40783934 - 40783655
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40783934 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 40783835  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40783834 tctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 40783736  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatt 323  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  40783735 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatt 40783655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 42 - 321
Target Start/End: Complemental strand, 23045557 - 23045279
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  23045557 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 23045458  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23045457 ttctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 23045359  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  23045358 cattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 23045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 42 - 321
Target Start/End: Original strand, 321625 - 321903
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  321625 ttactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 321724  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||||||| || |||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  321725 ttctataatatccttaatcatttattatttcattttatttttttt-tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 321823  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| ||| ||||    
T  321824 cattgaaacttgaaagtgacaagtattgtgaaacaaaaatattctctaaaatggacaagtattatgaaacggagggagta 321903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 42 - 324
Target Start/End: Original strand, 284332 - 284613
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  284332 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgtt 284431  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  284432 ttctataatacccttaatcatttattatttcattttacttttct-ctctctctacaataaatatgcaagggtattattgataagtcaataattaatgttg 284530  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatta 324  Q
    |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  284531 cattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatta 284613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 54 - 322
Target Start/End: Original strand, 23526251 - 23526517
Alignment:
Q  54 tttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatc 153  Q
    ||||||||||||||| ||||||| ||||||||| |||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||| |    
T  23526251 tttcaaaatacatgttcattttggagaaattgcagtaatcaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtgttttctataatacc 23526350  T
Q  154 ctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttg 253  Q
    || ||||||||||||||||||| ||        || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23526351 cttaaccatttattatttcattctatttttt--ctatctctacaataaatatgtaagggtattattgacaagacaataattaatgttgcattgaaacttg 23526448  T
Q  254 aaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    |||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||| ||| |||||    
T  23526449 aaagtgacaagtattgtgaaacaaaattattcttcaaaatggacaagtattatgaaacggagggagtat 23526517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 50 - 321
Target Start/End: Complemental strand, 47038120 - 47037852
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||||||||||||||||||||||| ||||||||   |||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  47038120 tccgtttcaaaatacatgtccattttggagaaattgtactaactaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataa 47038023  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47038022 tacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 47037924  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||| |||||| ||||||||||||| | |||||| |||||||||||||||||| ||| ||||    
T  47037923 cttgaaagtgacaagtattgtaaaacaaaattattctttaaaatagacaagtattatgaaacggagggagta 47037852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 43 - 317
Target Start/End: Original strand, 46771637 - 46771911
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||    
T  46771637 tactctatccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaattaaataaattttgttatttttgatgaaattatgtgtgtgttt 46771736  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| ||||||||||| ||||||| ||        |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |    
T  46771737 tctataatacccttaaccatttattttttcattctattttttttctctctctacaataaatatgtaagagtattattgacaagaaaataattaatgttac 46771836  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaagga 317  Q
    |||||||||||||||||| || |||||||||||||||||||| |  |||||| ||||||||||||||||| ||||    
T  46771837 attgaaacttgaaagtgataagtattgtgaaacaaaattattcttcaaaatgaacaagtattatgaaacggagga 46771911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 38 - 325
Target Start/End: Complemental strand, 24772187 - 24771902
Alignment:
Q  38 taagttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtg 137  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||| ||||||||    
T  24772187 taagttactccctccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtg 24772088  T
Q  138 tgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaat 237  Q
    | |||||||||||| ||| ||||||||||||||| ||| ||        |||| ||||||||||||||  |||| ||||||||| || ||||||||||||    
T  24772087 tattttctataatacccttaaccatttattattttattcta--ttttttctctttctacaataaatatttaaggctattattgaaaaaacaataattaat 24771990  T
Q  238 gttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtattat 325  Q
     ||||||||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  24771989 attgcattgaaacttgaaagagacatgtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtattat 24771902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 39 - 312
Target Start/End: Complemental strand, 27211245 - 27210964
Alignment:
Q  39 aagttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgt 138  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| | |||| ||| |||||    
T  27211245 aagtaactccctccgtttcaaaatacatgtccattttggagaaattgcaataaccaagaaaccaaataaattttgttatttttgaggaaattatatgtgt 27211146  T
Q  139 gttttctataatatcctcaaccatttattatttcattttannnnnnnn--------ctctctctacaataaatatgcaagggtattattgacaagacaat 230  Q
    ||||||||||||| ||| ||||||||||||||| ||| ||                |||||||| |||||||||||||||||||||||||||||||||||    
T  27211145 gttttctataatacccttaaccatttattattttattctattttttttttctctctctctctctgcaataaatatgcaagggtattattgacaagacaat 27211046  T
Q  231 aattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    |||||||||||||||||||||| || ||||||| |||||||||||||||||||| |  ||||||||||| ||||||||||||    
T  27211045 aattaatgttgcattgaaacttaaatgtgacaagtattgtgaaacaaaattattcttaaaaatggacaaatattatgaaacg 27210964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 63 - 328
Target Start/End: Original strand, 33082765 - 33083028
Alignment:
Q  63 acatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccat 162  Q
    ||||||| |||||| |||||||||  ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||| ||||||    
T  33082765 acatgtctattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaattatgtgtgtattttctataatacccttaaccat 33082864  T
Q  163 ttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 262  Q
    ||||||||| ||| ||        |||| ||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||    
T  33082865 ttattattttattctatttttt--ctctttctacaataaatatttaagggtattattgagaagacaataattaatattgcattgaaatttgaaagagaca 33082962  T
Q  263 aatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtattatcta 328  Q
      |||||||||||||||||||| | ||||||||||||||||||||||||| ||| |||||||||||    
T  33082963 tgtattgtgaaacaaaattattctttaaaatggacaagtattatgaaacggagggagtattatcta 33083028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 42 - 311
Target Start/End: Complemental strand, 51065034 - 51064764
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||| ||||| |||||||||| |||||||| |    |||||| |||||||||||| |||| |||||| |||||| | | ||||| ||    
T  51065034 ttactccctccgtttcacaatacttgtccattttaaagaaattacacataccaaggaatcaaataaatgttgtcatttttgatgaaattctttgtgtttt 51064935  T
Q  142 ttctataatat---cctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatg 238  Q
    ||||||||||    ||| |  | |||||||||||||| ||        |||||||||||||||||| | |||||||||||||| ||   ||||||||| |    
T  51064934 ttctataataatacccttactcgtttattatttcattatattattt--ctctctctacaataaataggtaagggtattattgataaactaataattaacg 51064837  T
Q  239 ttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaac 311  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||| ||||||    
T  51064836 ttgcattgaaacttgaaagtgacaaataaagtgaaacaaaattattctctaaaatggacaagtattgtgaaac 51064764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 97 - 310
Target Start/End: Original strand, 18396749 - 18396960
Alignment:
Q  97 aaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctac 196  Q
    |||| ||||||||||||||||||||||||||| ||||||||  |||||||||||||  | ||||||| ||||||||||| ||        ||||||||||    
T  18396749 aaattaaataaattttgttattttttatgaaattatgtgtggtttttctataatatatttaaccattcattatttcattctattattt--ctctctctac 18396846  T
Q  197 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatgga 296  Q
    |||||||| | ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||| || ||||   |    
T  18396847 aataaataagtaagggaattattgaaaagtcaataattaatgttgcattgaaacttgaaagtgacaaattatgtaaaacaaaattattctccaaaagcaa 18396946  T
Q  297 caagtattatgaaa 310  Q
    |||||||| |||||    
T  18396947 caagtattgtgaaa 18396960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 91 - 311
Target Start/End: Complemental strand, 31004012 - 31003797
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    ||||||||||||||||||||||   |||||| |||||| ||||||| | |||||||||||| ||| ||||||||||||||| ||| ||        ||||    
T  31004012 accaagaaatcaaataaatttt---atttttaatgaaagtatgtgtattttttctataatacccttaaccatttattatttaattctattattt--ctct 31003918  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaa 290  Q
    |||||||||||||| | ||||||||||| |||||  ||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||| || ||    
T  31003917 ctctacaataaataggtaagggtattatggacaaaccaacaattaatgttgcattgaaacttgaaagtggcaagtaatgtgaaacaaaattattctccaa 31003818  T
Q  291 aatggacaagtattatgaaac 311  Q
    ||  || ||||||| ||||||    
T  31003817 aagcgataagtattgtgaaac 31003797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 91 - 284
Target Start/End: Complemental strand, 40261501 - 40261322
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtttt-ctataatatcctcaaccatttattatttcattttannnnnnnnctc 189  Q
    |||||||||||||||||||||||||| |||| |||||| |  |||||| |||| |||||||||| | ||||||||||||||||               ||    
T  40261501 accaagaaatcaaataaattttgttaattttgatgaaattgcgtgtgtttttttctataatatcattaaccatttattatttc---------------tc 40261417  T
Q  190 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  40261416 tctctacaataaatatgtaagggtattattgacaaaccaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattatt 40261322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 190 - 324
Target Start/End: Complemental strand, 40562416 - 40562283
Alignment:
Q  190 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttcta 289  Q
    ||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| |  |    
T  40562416 tctctgcaataaatatgcaagg-tatcattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaaatcattcttca 40562318  T
Q  290 aaatggacaagtattatgaaacgaaggaagtatta 324  Q
    ||||||||||||||||| ||||| | |||||||||    
T  40562317 aaatggacaagtattataaaacggatgaagtatta 40562283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 93 - 309
Target Start/End: Complemental strand, 27143239 - 27143026
Alignment:
Q  93 caagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtttt-ctataatatcctcaaccatttattatttcattttannnnnnnnctctc 191  Q
    ||||||||||||||||||||||||||||| | |||| |  ||| || |||| ||||||||| || || |||||||||||||||| ||        |||||    
T  27143239 caagaaatcaaataaattttgttatttttgaggaaattccgtgagtttttttctataatattcttaatcatttattatttcattctattattt--ctctc 27143142  T
Q  192 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaa 291  Q
    |||||| |||||| | |||||||||||||||||  ||||||||||||||| |||||||||||  |||||||| || ||||||||||||||||| || |||    
T  27143141 tctacagtaaataggtaagggtattattgacaaaccaataattaatgttgtattgaaacttg--agtgacaagtaatgtgaaacaaaattattctccaaa 27143044  T
Q  292 atggacaagtattatgaa 309  Q
    |  ||||| |||||||||    
T  27143043 agcgacaattattatgaa 27143026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 111 - 312
Target Start/End: Complemental strand, 31061662 - 31061465
Alignment:
Q  111 ttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaag 210  Q
    |||||||||||||||||| ||||||||| ||||| |||||| ||| ||||||||||||||||||| ||         | |||||||| ||||||||  ||    
T  31061662 ttgttattttttatgaaattatgtgtgttttttccataataccct-aaccatttattatttcattatatta------tttctctacagtaaatatgtgag 31061570  T
Q  211 ggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca---aatattgtgaaacaaaattattttctaaaatggacaagtattatg 307  Q
    |||||||||| |||  |||||||||||||||||||||||||||| |||||||   | || ||||||| |||||||||||| ||||  |||||||||| ||    
T  31061569 ggtattattgtcaaaccaataattaatgttgcattgaaacttgagagtgacaagtagtaatgtgaaataaaattattttccaaaagtgacaagtattgtg 31061470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 252
Target Start/End: Original strand, 3657125 - 3657282
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    ||||||||||||||||||||||||||||||| |||||| | ||| ||| |||||||||||| ||| |||||||||  |||||||| ||        ||||    
T  3657125 accaagaaatcaaataaattttgttatttttaatgaaattttgtatgttttttctataataaccttaaccattta--atttcattcta--ttattcctct 3657220  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaactt 252  Q
    |||||||||||||| | ||  |||||||||||||  ||||||||||||||||||||||||||    
T  3657221 ctctacaataaataggtaaaagtattattgacaaaccaataattaatgttgcattgaaactt 3657282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 188 - 285
Target Start/End: Complemental strand, 40052597 - 40052500
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattt 285  Q
    |||||||| |||||||| |||| | ||||||||||||  ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  40052597 tctctctataataaataagcaacgatattattgacaaaccaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattattt 40052500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 1838053 - 1837886
Alignment:
Q  94 aagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctc 193  Q
    |||||||||||||||||||||||||||| |||||| ||  ||||| |||||||||||| ||| | ||||||||||||| ||  ||        ||||||     
T  1838053 aagaaatcaaataaattttgttatttttgatgaaatta--tgtgttttttctataatacccttacccatttattattttatcatattatttctctctctt 1837956  T
Q  194 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 263  Q
    |||||||||||    ||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||    
T  1837955 tacaataaatagattagggtattattgataaatcaataattaatgttgcattgaaacttaaaagtgacaa 1837886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 1749314 - 1749435
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||| ||||||||| |||||||  || ||||  | |||| ||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  1749314 tccgttttaaaatacatttccatttaaaaaaaatcacagtaatcaagaaatcaaataaattttgttatttttgatgaaattatatgtgtgttttctataa 1749413  T
Q  150 tatcctcaaccatttattattt 171  Q
    || | | |||||||||||||||    
T  1749414 tagcattaaccatttattattt 1749435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 91 - 284
Target Start/End: Complemental strand, 34458950 - 34458761
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    ||||||||||||||||||||||  |||||||||||||| | ||||| |  ||||||||||| ||| |   ||||||||||||||| ||        ||||    
T  34458950 accaagaaatcaaataaatttttctattttttatgaaattctgtgttt--tttctataataaccttactaatttattatttcattctattattt--ctct 34458855  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    ||||| ||| |||||| ||||||||||| |  ||  |||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||||    
T  34458854 ctctataatgaatatgtaagggtattatcggtaaaccaataattaatgttgcatcgaaacttgaaagtgacaagtaaagtgaaacaaaattatt 34458761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 23166983 - 23166860
Alignment:
Q  189 ctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttct 288  Q
    ||||||| ||||||||   ||| |||||||||||||  ||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||| |||    
T  23166983 ctctctaaaataaatagataagagtattattgacaaatcaataattaatgttgtattgaaacttgaaagtaataaataatgtgaaacaaaattattctct 23166884  T
Q  289 aaaatggacaagtattatgaaacg 312  Q
    ||||  ||| |||||| |||||||    
T  23166883 aaaagcgacgagtattgtgaaacg 23166860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 52037382 - 52037267
Alignment:
Q  58 aaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctca 157  Q
    ||||||||||||||||||  |||||||||  || |||| ||| |||||||||||| |||||||| || ||| ||  ||||||||||||||||||  || |    
T  52037382 aaaatacatgtccattttagagaaattgcattatccaaaaaaccaaataaattttattatttttgataaaatta--tgtgtgttttctataatactctta 52037285  T
Q  158 accatttattatttcatt 175  Q
    ||||||||||||||||||    
T  52037284 accatttattatttcatt 52037267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 318
Target Start/End: Original strand, 14925610 - 14925736
Alignment:
Q  190 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttcta 289  Q
    ||||||||||||||| | ||| |||||||||||||  |||||  ||| |||||||||||||||||||  ||||| ||  |||||||||||||||  ||||    
T  14925610 tctctacaataaataggtaagagtattattgacaaaccaata--taaggttgcattgaaacttgaaaacgacaagtaaagtgaaacaaaattatgctcta 14925707  T
Q  290 aaatggacaagtattatgaaacgaaggaa 318  Q
    |||  |||||||||| ||||||| |||||    
T  14925708 aaaacgacaagtattgtgaaacggaggaa 14925736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 304
Target Start/End: Original strand, 24876714 - 24876821
Alignment:
Q  197 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatgga 296  Q
    |||||||| | ||| |||||||||||||  ||||||||||||| ||||||| ||||||||||||||| ||   ||||||||||||||| || ||||  ||    
T  24876714 aataaataagtaagagtattattgacaaaccaataattaatgtcgcattgacacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaaacga 24876813  T
Q  297 caagtatt 304  Q
    ||||||||    
T  24876814 caagtatt 24876821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 249
Target Start/End: Original strand, 52478016 - 52478170
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    ||||||||||||||||||||||||||||||| ||||||   | ||||| |||||||||||| ||| ||  |||||| |||||||| ||        | ||    
T  52478016 accaagaaatcaaataaattttgttatttttgatgaaa--ttttgtgttttttctataataaccttaaaaatttatcatttcattcta--ttatttccct 52478111  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    |||||| |||||||   |||| ||||||||||||  ||||||||||||||| |||||||    
T  52478112 ctctaccataaatagataaggatattattgacaaatcaataattaatgttgaattgaaa 52478170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 1749457 - 1749514
Alignment:
Q  227 caataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    |||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  1749457 caataactaatgttgcattgaaacttaaaagtaacaagtattgtgaaacaaaattatt 1749514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 3943060 - 3943113
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  3943060 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 3943113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 9588670 - 9588723
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  9588670 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 9588723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 13985037 - 13984991
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  13985037 tccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 13984991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 312
Target Start/End: Original strand, 25929248 - 25929366
Alignment:
Q  194 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaat 293  Q
    |||||||||||   |||||||||||||| ||  ||||| |||||||||| |||||||||||||| | ||| |    ||||||||||||||| | |||||     
T  25929248 tacaataaatagataagggtattattgataaatcaatatttaatgttgcgttgaaacttgaaaggggcaagtgaaatgaaacaaaattattctttaaaag 25929347  T
Q  294 ggacaagtattatgaaacg 312  Q
     |||||||||| |||||||    
T  25929348 cgacaagtattgtgaaacg 25929366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 41959077 - 41959131
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    |||||| |||||||||||||||||||||||||||| |||||||||  ||||||||    
T  41959077 ttactccctccgtttcaaaatacatgtccattttggagaaattgcaataaccaag 41959131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 7765072 - 7765147
Alignment:
Q  102 aaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcatttt 177  Q
    ||||||||||||||||||||  ||||| ||| |||||||||||  ||||| ||  ||||||||||||||| |||||    
T  7765072 aaataaattttgttatttttggtgaaattatatgtgtgttttccgtaatacccataaccatttattatttaatttt 7765147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 44228275 - 44228228
Alignment:
Q  49 ctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    |||| ||||||||||||||||||||||| ||||||||| |||||||||    
T  44228275 ctccatttcaaaatacatgtccattttggagaaattgctgtaaccaag 44228228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 284
Target Start/End: Complemental strand, 14350565 - 14350511
Alignment:
Q  230 taattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    ||||||||||||||||||||||| |||||||||| || | | |||||||||||||    
T  14350565 taattaatgttgcattgaaactttaaagtgacaagtaatataaaacaaaattatt 14350511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 1168369 - 1168414
Alignment:
Q  51 ccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||    
T  1168369 ccgtttcaaaatacatgtcgtttttgaagaaattgcagtaaccaag 1168414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 44227848 - 44227889
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaatt 84  Q
    ||||| |||||||||||||||||||||||||||| |||||||    
T  44227848 tactccctccgtttcaaaatacatgtccattttggagaaatt 44227889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 10845474 - 10845513
Alignment:
Q  36 agtaagttactctctccgtttcaaaatacatgtccatttt 75  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  10845474 agtaagatactcactccgtttcaaaatacatgtccatttt 10845513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 49756742 - 49756684
Alignment:
Q  190 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaa 248  Q
    ||||| |||||||||   |||||||| |||||||| |||||||||| ||||||||||||    
T  49756742 tctctgcaataaatacttaagggtataattgacaaaacaataattattgttgcattgaa 49756684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 3943804 - 3943763
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaatt 84  Q
    ||||| |||||||||||||||||||||||||||  |||||||    
T  3943804 tactccctccgtttcaaaatacatgtccattttagagaaatt 3943763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 40562797 - 40562733
Alignment:
Q  103 aataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttatta 168  Q
    ||||||||||||||||||| || ||| ||| | |||||||||||||||| | | ||||||||||||    
T  40562797 aataaattttgttatttttgat-aaattatatatgtgttttctataataccattaaccatttatta 40562733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 41959850 - 41959809
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaatt 84  Q
    ||||| |||||||||||||||||||||||||||  |||||||    
T  41959850 tactccctccgtttcaaaatacatgtccattttagagaaatt 41959809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 40564293 - 40564241
Alignment:
Q  57 caaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaat 109  Q
    ||||||| |||||||||||| | |||| || |||||||||||| |||||||||    
T  40564293 caaaatatatgtccattttggaaaaatcgcagtaaccaagaaaccaaataaat 40564241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 50 - 321
Target Start/End: Original strand, 7146920 - 7147190
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  7146920 tccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttttataa 7147019  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7147020 tacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 7147118  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  7147119 cttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 7147190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 49 - 312
Target Start/End: Complemental strand, 2540202 - 2539939
Alignment:
Q  49 ctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctata 148  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2540202 ctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctata 2540103  T
Q  149 atatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaa 248  Q
    ||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2540102 atacccttaatcatttattatttcattttattttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaa 2540003  T
Q  249 acttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  2540002 acttgaaagtgacaagtattgtgaaacaaaattattctttaaaatggacaagtattatgaaacg 2539939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 42 - 312
Target Start/End: Original strand, 37345570 - 37345839
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| ||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  37345570 ttactccctccgtttcaaaatacatgtccattttgaagaaattgcaccaaccaagaaaccaaataaattttgttatttttaatgaaaatatgtgtgtgtt 37345669  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37345670 ttctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 37345768  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    ||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  37345769 cattgaaacttgaaaatgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacg 37345839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 43 - 321
Target Start/End: Complemental strand, 40058580 - 40058303
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||| | |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  40058580 tactccctccgtttcaaaatacatgtccatttcggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 40058481  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40058480 tctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 40058382  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  40058381 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 40058303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 43 - 323
Target Start/End: Complemental strand, 11174500 - 11174221
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  11174500 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 11174401  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11174400 tctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 11174302  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatt 323  Q
    ||||||||||||||||||||| |||||||||||||||||||| | ||||||| ||||||||||||||||| ||| ||||||    
T  11174301 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatgaacaagtattatgaaacggagggagtatt 11174221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 42 - 325
Target Start/End: Complemental strand, 43275675 - 43275395
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||  |    
T  43275675 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgt--t 43275578  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43275577 ttctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagataataattaatgttg 43275479  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtattat 325  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  43275478 cattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtattat 43275395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 43 - 321
Target Start/End: Complemental strand, 40919006 - 40918731
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||    
T  40919006 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttttatgaaaacatgtgtgt--tt 40918909  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40918908 tctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 40918810  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  40918809 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 40918731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 43 - 323
Target Start/End: Complemental strand, 11646602 - 11646323
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| || ||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  11646602 tactcccttcgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttt 11646503  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11646502 tctataatacccttaatcatttattatttcattttactttttt-ctctctctacaataaatatgcaagggtattattgacaagtcaataattaatgttgc 11646404  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatt 323  Q
    ||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  11646403 attgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatt 11646323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 43 - 312
Target Start/End: Original strand, 3585451 - 3585719
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  3585451 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttt 3585550  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3585551 tctataatacccttaatcatttattatttcattttactttttc-ctctctctacaataaatatgcaagggtattattgacaagtcaataattaatgttgc 3585649  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  3585650 attgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatagacaagtattatgaaacg 3585719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 50 - 323
Target Start/End: Complemental strand, 30999791 - 30999522
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    |||||||||||||||||||| |||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  30999791 tccgtttcaaaatacatgtcaattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctataa 30999694  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30999693 tacccttaatcatttattatttcattttatttttt--ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 30999596  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatt 323  Q
    ||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  30999595 cttgaaagtaacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatt 30999522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 42 - 322
Target Start/End: Original strand, 36068079 - 36068358
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||||||||||||||||||||| || |||||   ||||||| ||| ||||||||||||||||||||| |||||||||| ||||||||    
T  36068079 ttactccctccgtttcaaaatacatgtccattttggaggaattgtactaaccaaaaaaccaaataaattttgttatttttaatgaaaatatatgtgtgtt 36068178  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| || |||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36068179 ttctataatacccttaatcattaattatttcattttactttttt-ctctctctacaataaatatgcaagggtattattgacaagtcaataattaatgttg 36068277  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  36068278 cattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 36068358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 42 - 322
Target Start/End: Original strand, 27034996 - 27035273
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| |||| |||||||| |||||| ||||| ||||||    
T  27034996 ttactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataattttttttatttttgatgaaattatgtctgtgtt 27035095  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    | |||||||| ||| ||||||||||||||||||| ||        ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  27035096 t-ctataatacccttaaccatttattatttcattctatttttt--ctctctctacagtaaatatgtaagggtattattgacaagacaataattaatgttg 27035192  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    |||||||||||||||||||||| |||||||||||||||||||| || |||||| ||||||||||||||||| ||| |||||    
T  27035193 cattgaaacttgaaagtgacaagtattgtgaaacaaaattattctccaaaatgaacaagtattatgaaacggaggcagtat 27035273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 42 - 306
Target Start/End: Complemental strand, 20546565 - 20546308
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||   || |||||||| |||||||||||||||||||| |||||| |||||||||  |    
T  20546565 ttactccctccatttcaaaatatatgtccattttgaagaaattgcaacaatcaagaaattaaataaattttgttatttttgatgaaattatgtgtgt--t 20546468  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    || ||| ||| ||| ||| ||||||||||||||| ||         | ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20546467 ttatatgatacccttaacaatttattatttcattatatttt-----tttctctacaataaatatgtaagggtattattgacaagacaataattaatgttg 20546373  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattat 306  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |  ||||||||||||||||||    
T  20546372 cattgaaacctgaaagtgacaagtattgtgaaacaaaattattcttcaaaatggacaagtattat 20546308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 50 - 312
Target Start/End: Original strand, 35866621 - 35866881
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||||| ||||| |||||||||| ||||||||      |||||||||| | |||||| ||||||||||| |||||| | | ||||| ||||||||||    
T  35866621 tccgtttcacaatacttgtccattttaaagaaattatatataccaagaaattagataaatgttgttatttttcatgaaattctttgtgttttttctataa 35866720  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || ||| || |||||||||||| ||| ||        |||||||||||||| ||||| ||| |||||||||| ||  ||||||||||||||| |||||||    
T  35866721 tacccttaaacatttattattttattctattattt--ctctctctacaatagatatgtaagagtattattgataaaccaataattaatgttgaattgaaa 35866818  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    |||||||||||||| ||   ||||||||||||||| || ||||| |||||||||| |||||||    
T  35866819 cttgaaagtgacaagtaaaatgaaacaaaattattctccaaaatagacaagtattgtgaaacg 35866881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 49 - 310
Target Start/End: Original strand, 28567925 - 28568184
Alignment:
Q  49 ctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtttt-ctat 147  Q
    |||||||||||||||| ||||||||||||||||||| |    |||||  |||||||||||| |||| ||||||||||||| | | ||||| |||| ||||    
T  28567925 ctccgtttcaaaatacttgtccattttgaagaaattacacataccaatgaatcaaataaatgttgtcattttttatgaaattctttgtgtctttttctat 28568024  T
Q  148 aatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattga 247  Q
    |||| |||   | |||||||||||||||  |        ||||||| |||||||||| | ||||||| |||||| ||  |||||||||||||||||||||    
T  28568025 aataccctgctc-atttattatttcattcaattattt--ctctctcaacaataaataggtaagggtaatattgataaaccaataattaatgttgcattga 28568121  T
Q  248 aacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaa 310  Q
    ||||| |||||||||| ||   ||||||||||| ||| || |||||||||||||||| |||||    
T  28568122 aacttcaaagtgacaagtaaaatgaaacaaaataattctccaaaatggacaagtattgtgaaa 28568184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 49 - 310
Target Start/End: Original strand, 28575518 - 28575777
Alignment:
Q  49 ctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtttt-ctat 147  Q
    |||||||||||||||| ||||||||||||||||||| |    |||||  |||||||||||| |||| ||||||||||||| | | ||||| |||| ||||    
T  28575518 ctccgtttcaaaatacttgtccattttgaagaaattacacataccaatgaatcaaataaatgttgtcattttttatgaaattctttgtgtctttttctat 28575617  T
Q  148 aatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattga 247  Q
    |||| |||   | |||||||||||||||  |        ||||||| |||||||||| | ||||||| |||||| ||  |||||||||||||||||||||    
T  28575618 aataccctgctc-atttattatttcattcaattattt--ctctctcaacaataaataggtaagggtaatattgataaaccaataattaatgttgcattga 28575714  T
Q  248 aacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaa 310  Q
    ||||| |||||||||| ||   ||||||||||| ||| || |||||||||||||||| |||||    
T  28575715 aacttcaaagtgacaagtaaaatgaaacaaaataattctccaaaatggacaagtattgtgaaa 28575777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 188 - 303
Target Start/End: Complemental strand, 27564000 - 27563885
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttc 287  Q
    ||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||||||||||| || ||    
T  27564000 tctctctacaataaataggtaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtaatatgaaacaaaattgttctc 27563901  T
Q  288 taaaatggacaagtat 303  Q
     ||||  |||||||||    
T  27563900 caaaagcgacaagtat 27563885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 284
Target Start/End: Complemental strand, 13881178 - 13880992
Alignment:
Q  97 aaatcaaataaattttgttattttttatgaaaatatgtgtgtgtttt-ctataatatcctcaaccatttattatttcattttannnnnnnnctctctcta 195  Q
    ||||||||||||||||||||||||| |||||| | |||| || |||| |||||||| ||| || |||||||||||||||| ||        |||||||||    
T  13881178 aaatcaaataaattttgttatttttgatgaaattgtgtgcgtttttttctataatacccttaatcatttattatttcattatattagtt--ctctctcta 13881081  T
Q  196 caataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    ||||||||  | |||  ||||||| ||||  ||||||||||| ||||||||||||||||||||||||| || | |||||||||||||||    
T  13881080 caataaattagtaagattattattaacaaatcaataattaatattgcattgaaacttgaaagtgacaagtaatttgaaacaaaattatt 13880992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 324
Target Start/End: Original strand, 28562427 - 28562701
Alignment:
Q  49 ctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtttt-ctat 147  Q
    |||||||||||||||| ||||||||||||||||||| |    |||||| |||||||||||| |||| |||||| |||||| | | ||||| |||| ||||    
T  28562427 ctccgtttcaaaatacttgtccattttgaagaaattacacataccaaggaatcaaataaatgttgtcatttttgatgaaattctttgtgtttttttctat 28562526  T
Q  148 aatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattga 247  Q
    |||| ||| |  ||||||| ||||||||  |        ||||||| | |||||||| | ||| ||| |||||| ||  |||||||||||||||||||||    
T  28562527 aatacccttactcatttatgatttcattcaattattt--ctctctcaaaaataaataggtaagagtaatattgataaaccaataattaatgttgcattga 28562624  T
Q  248 aacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatta 324  Q
    |||||||||||||||| ||   ||||||||||| ||| |  |||||||| ||||||| ||| ||| ||| |||||||    
T  28562625 aacttgaaagtgacaagtaaaatgaaacaaaataattcttcaaaatggataagtattgtgagacggagggagtatta 28562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 26628950 - 26628816
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatttt 286  Q
    |||||||||||||||||| | |||||||||||||| ||  |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||| |    
T  26628950 ctctctctacaataaataggtaagggtattattgataaatcaataattaatgttgcattgaaacttgaaaatgacaaataaagtgaaacaaaattattct 26628851  T
Q  287 ctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    | ||||   ||| ||||| ||||||| || |||||    
T  26628850 ccaaaagcaacatgtattgtgaaacggagaaagta 26628816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 321
Target Start/End: Complemental strand, 45400902 - 45400770
Alignment:
Q  189 ctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttct 288  Q
    |||||||||||||||| | |||  ||||||||| ||   |||||||||||||||||||||| || |||||||||||||  |||||||||||||||| ||     
T  45400902 ctctctacaataaataagtaagaatattattgataaattaataattaatgttgcattgaaatttaaaagtgacaaataaagtgaaacaaaattattctcc 45400803  T
Q  289 aaaatggacaagtattatgaaacgaaggaagta 321  Q
    ||||  |||  ||||||||||||| ||| ||||    
T  45400802 aaaaacgacttgtattatgaaacggagggagta 45400770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 91 - 245
Target Start/End: Complemental strand, 28326883 - 28326734
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||   ||||| ||||||  || ||| ||||||||||||||| ||        ||||    
T  28326883 accaagaaatcaaataaattttgttatttttgatgaaattatgtgt---ttttcaataatactcttaactatttattatttcattcta--ttatttctct 28326789  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 245  Q
    ||| |||||||| |||||||  ||||||||||||  ||||||||| |||||||||    
T  28326788 ctccacaataaacatgcaagattattattgacaaaccaataattagtgttgcatt 28326734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 40486508 - 40486453
Alignment:
Q  41 gttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  40486508 gttactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 40486453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 10180981 - 10180908
Alignment:
Q  208 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaatt 281  Q
    |||||||||||||||||    |||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  10180981 aagggtattattgacaaattcataactaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaatt 10180908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 45278755 - 45278701
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  45278755 ttactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 45278701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 8697951 - 8697898
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  8697951 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 8697898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 93 - 284
Target Start/End: Complemental strand, 30906917 - 30906726
Alignment:
Q  93 caagaaatcaaataaattttgttattttttatgaaaatatgt--gtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    |||||||||||||||||||||||||||||||||||| | |||  || | |||||||| | | ||| ||||||||||||||| ||| ||        |||     
T  30906917 caagaaatcaaataaattttgttattttttatgaaattttgtgagttttttttctatgaaaaccttaaccatttattatttaattcta--ttatttctca 30906820  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    | |||||| ||||| | |||| ||||||| ||||  ||||||||||| ||||||| ||| || ||||| |||| || ||| ||| |||||||||    
T  30906819 cactacaacaaataagtaaggatattattaacaattcaataattaatattgcattaaaatttaaaagtaacaagtaatgtaaaataaaattatt 30906726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 41308014 - 41307961
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  41308014 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 41307961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 10646598 - 10646645
Alignment:
Q  49 ctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  10646598 ctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 10646645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 10181074 - 10181002
Alignment:
Q  102 aaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcatt 175  Q
    ||||||||||||||||||||||| ||| || || ||| |||| ||||||| | | |||||||||||||||||||    
T  10181074 aaataaattttgttattttttataaaattacgtttgt-ttttttataataccgttaaccatttattatttcatt 10181002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 41305762 - 41305803
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaatt 84  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  41305762 tactctctccgtttcaaaatacatgtccattttagagaaatt 41305803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 249
Target Start/End: Original strand, 39151460 - 39151607
Alignment:
Q  97 aaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctac 196  Q
    |||||||||||| |||||||||||| |||||| ||||| | | |||||||||||||  |  | |||||||||||| ||| ||         ||||| |||    
T  39151460 aaatcaaataaactttgttatttttgatgaaattatgtattt-ttttctataatataatttatcatttattattttattctattatt----tctctttac 39151554  T
Q  197 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    |||||||| | ||| |||| |||||||||  ||||||||||||||| ||||||    
T  39151555 aataaataggtaagagtatcattgacaagctaataattaatgttgccttgaaa 39151607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 71
Target Start/End: Original strand, 40494383 - 40494412
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtcca 71  Q
    ||||||||||||||||||||||||||||||    
T  40494383 ttactctctccgtttcaaaatacatgtcca 40494412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 43 - 312
Target Start/End: Complemental strand, 40122762 - 40122496
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  40122762 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaaaaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 40122663  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40122662 tctataatacccttaaccatttattatttcattttatttttt---tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 40122566  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  40122565 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacg 40122496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 50 - 323
Target Start/End: Complemental strand, 22321537 - 22321266
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22321537 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 22321438  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22321437 tacccttaatcatttattatttcattttatttttt--ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 22321340  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatt 323  Q
    |||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| ||| ||||||    
T  22321339 cttgaaagtgacaagtattgtgaaacaaaattattctctaaaatagacaagtattatgaaacggagggagtatt 22321266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 43 - 323
Target Start/End: Original strand, 25704651 - 25704930
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  25704651 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 25704750  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25704751 tctataatacccttaatcatttattatttcattttatttttttt-tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 25704849  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatt 323  Q
    | ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  25704850 actgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatt 25704930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 50 - 323
Target Start/End: Original strand, 44568844 - 44569116
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44568844 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaaaaaaccaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 44568943  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44568944 tacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 44569042  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatt 323  Q
    | |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  44569043 catgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatt 44569116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 43 - 322
Target Start/End: Original strand, 21310425 - 21310699
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  21310425 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 21310524  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21310525 tctataatacccttaatcatttattatttcattttttttt-----tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 21310619  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  21310620 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 21310699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 50 - 322
Target Start/End: Complemental strand, 24706517 - 24706246
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24706517 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 24706418  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24706417 tacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 24706319  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  24706318 cttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 24706246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 43 - 312
Target Start/End: Complemental strand, 21661812 - 21661544
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  21661812 tactccctccctttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttattatttttgatgaaaatatgtgtgtgttt 21661713  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| | | ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21661712 tctataatacctttaaccatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaatacttaatgttgc 21661614  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21661613 attgaaacttgaaagtgataaatattgtgaaacaaaattattctctaaaatggacaagtattatgaaacg 21661544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 43 - 312
Target Start/End: Complemental strand, 21670576 - 21670308
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  21670576 tactccctccctttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaatttttttatttttgatgaaaatatgtgtgtgttt 21670477  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| | | ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21670476 tctataatacctttaaccatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaatacttaatgttgc 21670378  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21670377 attgaaacttgaaagtgataaatattgtgaaacaaaattattctctaaaatggacaagtattatgaaacg 21670308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 43 - 322
Target Start/End: Original strand, 14261044 - 14261322
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  14261044 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgataaaaatatgtgtgtgttt 14261143  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| ||  ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14261144 tctataatacccttaataatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 14261242  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    ||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  14261243 attgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 14261322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 43 - 321
Target Start/End: Original strand, 12071561 - 12071837
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||| |||  |||||||||||||||||||| ||||||||||||||||||||    
T  12071561 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaataaactaaataaattttgttatttttgatgaaaatatgtgtgtgttt 12071660  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12071661 tctataatacccttaatcatttattatttcattttatttttt--ctctctctacaataaatatgcaagggtattattgacaagacaagaattaatgttgc 12071758  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  12071759 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 12071837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 50 - 311
Target Start/End: Original strand, 50767871 - 50768129
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||||||||||||| | ||||||  |||||||||  ||| ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  50767871 tccgtttcaaaatacatattcattttagagaaattgcactaatcaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttttctataa 50767970  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || ||| ||  ||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50767971 tacccttaataatttattatttcattttatttttt---tctctctacaataaatatgtaagggtattattgacaagacaataattaatgttgcattgaaa 50768067  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaac 311  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50768068 cttgaaagtgacaaatattgtgaaacaaaattattctctaaaatggacaagtattatgaaac 50768129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 42 - 325
Target Start/End: Complemental strand, 20249290 - 20249010
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    ||||||||||||||||||||||||||||||||||| | ||||||   ||||||||||| ||||||||||||||||||||| | |||| ||||||||||||    
T  20249290 ttactctctccgtttcaaaatacatgtccattttggataaattgtattaaccaagaaaccaaataaattttgttatttttgaagaaattatgtgtgtgtt 20249191  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    | |||||||| ||| ||||||||||||||| ||| ||        |||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  20249190 t-ctataatacccttaaccatttattattttattctatttttt--ctctctctacaataaatatgtaagggtattattgacaagacaataattaatattg 20249094  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtattat 325  Q
    |||||||||||||||| ||||  |||||||||||||||||||| || |||||||||||||||||||||||| ||  ||||||||    
T  20249093 cattgaaacttgaaagagacaggtattgtgaaacaaaattattctccaaaatggacaagtattatgaaacggagtgagtattat 20249010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 43 - 251
Target Start/End: Complemental strand, 34324860 - 34324653
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaat-aaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  |||||||||||  |||| |||||||||||||||| |||||||||||||||||||    
T  34324860 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaactaaattaaattttgttatttttgatgaaaatatgtgtgtgtt 34324761  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  34324760 ttctataatacccttaatcatttattatttcatttta--ttttttctctctctacaataaatatgcaagggtattattgacaagaaaatcattaatgttg 34324663  T
Q  242 cattgaaact 251  Q
    ||||||||||    
T  34324662 cattgaaact 34324653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 49 - 305
Target Start/End: Original strand, 31892244 - 31892493
Alignment:
Q  49 ctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctata 148  Q
    |||||| ||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| |||||||| |||||| |||||||    ||||||||    
T  31892244 ctccgtatcaaaatacatgttcattttaaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaattatgtgt----tttctata 31892339  T
Q  149 atatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaa 248  Q
    ||| | |  |||||||||||||||||| ||        |||||| | |||||||||||||||| |||||||||||||||||||||||||||| |||| ||    
T  31892340 atacctttgaccatttattatttcattctattttt---ctctctttgcaataaatatgcaaggctattattgacaagacaataattaatgttacattaaa 31892436  T
Q  249 acttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtatta 305  Q
    |||| |||||||||| |||||| ||||||||||||| || || || |||||||||||    
T  31892437 acttaaaagtgacaagtattgtaaaacaaaattattctccaagatagacaagtatta 31892493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 91 - 304
Target Start/End: Original strand, 19692771 - 19692982
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    ||||||||||||||||||| |||| ||||||||||||| | | ||||| |||||||||||||||| |  |||||||||||||||| ||        ||||    
T  19692771 accaagaaatcaaataaatgttgtcattttttatgaaattctttgtgttttttctataatatccttactcatttattatttcattctattattt--ctct 19692868  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaa 290  Q
    |||||||||||||| | |||||| ||||||| ||  ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| |||||    
T  19692869 ctctacaataaataagtaagggtgttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctctaa 19692968  T
Q  291 aatggacaagtatt 304  Q
    ||| ||||||||||    
T  19692969 aatagacaagtatt 19692982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 91 - 304
Target Start/End: Original strand, 19703356 - 19703567
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    ||||||||||||||||||| |||| ||||||||||||| | | ||||| |||||||||||||||| |  |||||||||||||||| ||        ||||    
T  19703356 accaagaaatcaaataaatgttgtcattttttatgaaattctttgtgttttttctataatatccttactcatttattatttcattctattattt--ctct 19703453  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaa 290  Q
    |||||||||||||| | |||||| ||||||| ||  ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| |||||    
T  19703454 ctctacaataaataagtaagggtgttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctctaa 19703553  T
Q  291 aatggacaagtatt 304  Q
    ||| ||||||||||    
T  19703554 aatagacaagtatt 19703567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 134 - 312
Target Start/End: Original strand, 21064851 - 21065029
Alignment:
Q  134 tgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataat 233  Q
    |||||||||| |||||||  || ||| ||||||||||||||| ||         ||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  21064851 tgtgtgttttttataatactcttaactatttattatttcattctattttttttttctctctacaataaatatgtaagagtattattgtcaagacaataat 21064950  T
Q  234 taatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    |||||||||||||||| ||||||| || || |||||||||||||||||||| ||||||||| |||||||||||||||||    
T  21064951 taatgttgcattgaaatttgaaagcgataagtattgtgaaacaaaattattctctaaaatgaacaagtattatgaaacg 21065029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 98 - 324
Target Start/End: Complemental strand, 18507484 - 18507263
Alignment:
Q  98 aatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctaca 197  Q
    ||||||||||| || ||||||||| |||||| | ||||||| |||||||||||| |||  || ||||||||||||||| ||        ||||||||| |    
T  18507484 aatcaaataaaatt-gttatttttgatgaaattttgtgtgttttttctataata-ccttgacaatttattatttcattatattatt---ctctctctata 18507390  T
Q  198 ataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggac 297  Q
    ||||||| | |||  ||||||||||||| |||||||||||||||||||||||||||||||||||||  | ||||||||||||||||  |||||||  |||    
T  18507389 ataaataagtaagaatattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagaaatgtgaaacaaaattatgctctaaaagcgac 18507290  T
Q  298 aagtattatgaaacgaaggaagtatta 324  Q
    ||||||| ||||||  || ||||||||    
T  18507289 aagtattgtgaaacagagtaagtatta 18507263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 93 - 321
Target Start/End: Complemental strand, 6129175 - 6128949
Alignment:
Q  93 caagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctct 192  Q
    ||||||||||||||||||||||||||||| || ||| | | ||| | ||||||| |||| ||| || ||||||||||||||||  |        ||||||    
T  6129175 caagaaatcaaataaattttgttatttttgataaaattctttgtattttttctacaatacccttaatcatttattatttcattccattattt--ctctct 6129078  T
Q  193 ctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaa 292  Q
    ||||||||||||   |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||| |  ||||    
T  6129077 ctacaataaatagataagggtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattcttcaaaa 6128978  T
Q  293 tggacaagtattatgaaacgaaggaagta 321  Q
      |||| ||||| ||||||| | ||||||    
T  6128977 gcgacatgtattgtgaaacggaagaagta 6128949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 94 - 311
Target Start/End: Original strand, 32543532 - 32543746
Alignment:
Q  94 aagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctc 193  Q
    |||||| ||||||| |||||||| |||| |||||| | | ||||| |||| ||||||| ||| || |||||||||||||||||||        || | ||    
T  32543532 aagaaaccaaataatttttgttaattttgatgaaattctttgtgtttttt-tataatacccttaatcatttattatttcattttattattt--ctttttc 32543628  T
Q  194 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaat 293  Q
    |||||||||||   |||||||||| ||||||  ||||||||||||| ||||| |||||||||||| |||| ||   ||||||||||||||| |||||||     
T  32543629 tacaataaatagataagggtattaatgacaaaccaataattaatgtcgcattaaaacttgaaagtaacaagtaaaatgaaacaaaattattctctaaaag 32543728  T
Q  294 ggacaagtattatgaaac 311  Q
     |||||||||| ||||||    
T  32543729 cgacaagtattgtgaaac 32543746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 91 - 244
Target Start/End: Complemental strand, 20714577 - 20714426
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtg-ttttctataatatcctcaaccatttattatttcattttannnnnnnnctc 189  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||| ||         ||    
T  20714577 accaataaatcaaataaattttgttatttttgatgaaactatgtgtgtgtttttctataata-ccttaaccatttattatttcattatattattta--tc 20714481  T
Q  190 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcat 244  Q
    | |||| ||||||||   |||||||||||||||||  ||||||||||||||||||    
T  20714480 tttctaaaataaataaataagggtattattgacaaaccaataattaatgttgcat 20714426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 227 - 310
Target Start/End: Complemental strand, 50839125 - 50839042
Alignment:
Q  227 caataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaa 310  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| || ||||  |||||||||| |||||    
T  50839125 caataattaatgttgcattgaaacttgaaaatgacaagtaatgtgaaacaaaattattctccaaaagcgacaagtattgtgaaa 50839042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 1988065 - 1988143
Alignment:
Q  73 tttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataata 151  Q
    |||| ||||||||| ||||| ||||||||||||||||||| |||||||| |||||| ||||| ||||||||||||||||    
T  1988065 tttggagaaattgcagtaactaagaaatcaaataaattttattatttttgatgaaattatgtatgtgttttctataata 1988143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 26676844 - 26676714
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    ||||||||||||||||| ||||| | ||||||||||||||||| |    |||||| |||||||||||| |||| ||||||||||||| | |  |||| ||    
T  26676844 ttactctctccgtttcacaatacttatccattttgaagaaattacacataccaaggaatcaaataaatgttgtcattttttatgaaattcttcgtgtttt 26676745  T
Q  142 ttctataatatcctcaaccatttattatttc 172  Q
    |||||||||| ||| |  |||||||||||||    
T  26676744 ttctataatacccttactcatttattatttc 26676714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 48652370 - 48652464
Alignment:
Q  190 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    |||||||  |||||| | |||||||||||| | ||  ||||||||||||| ||||| |||||| ||||| |||| ||  ||||||||||||||||    
T  48652370 tctctacgttaaataggtaagggtattattaataaatcaataattaatgtcgcattaaaactttaaagtaacaagtaaagtgaaacaaaattatt 48652464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 260
Target Start/End: Original strand, 1146176 - 1146249
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtga 260  Q
    ||||||||||||||||||  |||||||| ||  | ||| |||| | ||||||||||||||||| ||||||||||    
T  1146176 ctctctctacaataaataatcaagggtaataaaggcaaaacaacatttaatgttgcattgaaatttgaaagtga 1146249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 48652268 - 48652305
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaa 128  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  48652268 accaagaaatcaaataaattttgttatttttgatgaaa 48652305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 30939272 - 30939197
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 262  Q
    |||||||  |||||||||| |||||||| |||||  || |||| | ||||||||||||||||  ||||||||||||    
T  30939272 ctctctccgcaataaatatccaagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtgaca 30939197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 38617932 - 38617857
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 263  Q
    ||||||| ||||||||||  |||| || |||||| || |||||| ||||||||||||| ||  |||||||||||||    
T  38617932 tctctctgcaataaatatataaggataatattgataaaacaatatttaatgttgcattaaactttgaaagtgacaa 38617857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 19361662 - 19361700
Alignment:
Q  58 aaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  19361662 aaaatacatgtccattttggagaaattgcagtaaccaag 19361700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 17038410 - 17038377
Alignment:
Q  211 ggtattattgacaagacaataattaatgttgcat 244  Q
    ||||||||||| ||||||||||||||||||||||    
T  17038410 ggtattattgataagacaataattaatgttgcat 17038377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 20714413 - 20714349
Alignment:
Q  228 aataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaa 292  Q
    |||||||||||||||||||||| || ||| ||| ||||| | ||||| ||| ||||| |||||||    
T  20714413 aataattaatgttgcattgaaatttaaaaatgataaataatatgaaataaatttattctctaaaa 20714349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 26906555 - 26906591
Alignment:
Q  226 acaataattaatgttgcattgaaacttgaaagtgaca 262  Q
    |||||| |||||||||||||||| |||||||||||||    
T  26906555 acaatatttaatgttgcattgaaccttgaaagtgaca 26906591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 196; Significance: 1e-106; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 43 - 323
Target Start/End: Complemental strand, 12807130 - 12806851
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  12807130 tactccctccgtttcaaaatacatgtccattttggagaaattgcattaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 12807031  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12807030 tctataatacccttaatcatttattatttcattttattttttc-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 12806932  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatt 323  Q
    ||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  12806931 attgaaacttgaaagagacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtatt 12806851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 43 - 312
Target Start/End: Original strand, 25773649 - 25773917
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25773649 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 25773748  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25773749 tctataatacccttaatcatttattatttcattttatttttct-ctatctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 25773847  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    |||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  25773848 attgaaacttgaaagtgataagtattgtgaaacaaacttattctctaaaatggacaagtattatgaaacg 25773917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 42 - 322
Target Start/End: Complemental strand, 30720770 - 30720491
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  30720770 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 30720671  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    || ||||||| ||| || ||| |||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30720670 ttttataatacccttaatcatctattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataactaatgttg 30720572  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  30720571 cattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 30720491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 50 - 321
Target Start/End: Complemental strand, 40886880 - 40886610
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||||||||||||||| ||||||| |||||||||  ||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  40886880 tccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcgaataaattttgttatttttgatgaaaatatgtgtgtattttctataa 40886781  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40886780 tacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 40886682  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  40886681 cttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 40886610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 50 - 321
Target Start/End: Complemental strand, 36561369 - 36561099
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||||||||||||||||||||||  | ||||||| |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36561369 tccgtttcaaaatacatgtccattttagaaaaattgcagtaatcaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 36561270  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || | | ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36561269 tacctttaaccatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaatacttaatgttgcattgaaa 36561171  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  36561170 cttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 36561099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 43 - 322
Target Start/End: Complemental strand, 10285334 - 10285057
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| ||||||||||||||| ||||| |||||| |||||||||  |||||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  10285334 tactccctccgtttcaaaatagatgtctattttggagaaattgcattaaccaagaaactaaataaattttgttatttttgatgaaaatatgtgtgtgttt 10285235  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10285234 tctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagg-tattattgacaagacaataattaatgttgc 10285137  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    ||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||||||| ||| |||||    
T  10285136 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatagacaagtattatgaaacggagggagtat 10285057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 43 - 312
Target Start/End: Complemental strand, 37900901 - 37900632
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||  ||||||||| ||||||||| ||||||||||||  |||||||||||| ||||||| |||||| ||| |||||||||    
T  37900901 tactccctccgtttcaaaatacacatccattttggagaaattgcagtaaccaagaaactaaataaattttgatatttttgatgaaattatatgtgtgttt 37900802  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| ||||||||||||||||||| ||        | |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37900801 tctataatacccttaaccatttattatttcattctattttttttcactctctgcaataaatatgcaagggtattattgacaagacaataattaatgttgc 37900702  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    ||||||||||||||||||||| ||| |||||||||||||||| |  ||||| ||||||||||||||||||    
T  37900701 attgaaacttgaaagtgacaagtatcgtgaaacaaaattattcttcaaaatagacaagtattatgaaacg 37900632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 89 - 321
Target Start/End: Complemental strand, 25683459 - 25683229
Alignment:
Q  89 taaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnct 188  Q
    ||||||||||| ||||||||||||||||||||| || ||| |||||||||||||||||||||| ||| ||||||||||||||| ||| ||        ||    
T  25683459 taaccaagaaaccaaataaattttgttatttttgataaaattatgtgtgtgttttctataatacccttaaccatttattattttattctatttttt--ct 25683362  T
Q  189 ctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttct 288  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||||||||||||||| ||     
T  25683361 ctctctacaataaatatgtaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagttttatgaaacaaaattattctcc 25683262  T
Q  289 aaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||||||||||||| ||| ||||    
T  25683261 aaaatggacaagtattatgaaacggagggagta 25683229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 43 - 311
Target Start/End: Original strand, 16983258 - 16983524
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttatttttt--atgaaaatatgtgtgtgt 140  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| |||| || ||||||  ||||||  || ||||| |    
T  16983258 tactccctctgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataattttttttttttttttgatgaaatgatatgtgttt 16983357  T
Q  141 tttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgtt 240  Q
    |||||| |||| ||| ||||||| ||||||| |||||          ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  16983358 tttctacaatacccttaaccatt-attattttatttttattttt---tctctctgcaatagatatgcaagggtattattgaaaagacaataattaatgtt 16983453  T
Q  241 gcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaac 311  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |  ||||| |||||||||||| ||||    
T  16983454 gcattgaaacttaaaagtgacaagtattgtgaaacaaaattattcttcaaaatagacaagtattataaaac 16983524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 23097857 - 23097733
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttc 287  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| |||| |||||||||||||||||||| ||    
T  23097857 tctctctacaataaatatgtaagggtattattgacaagacaataattaatattgcattgaaacatgaaagtaacaagtattgtgaaacaaaattattctc 23097758  T
Q  288 taaaatggacaagtattatgaaacg 312  Q
     ||||||||||||||||||||||||    
T  23097757 caaaatggacaagtattatgaaacg 23097733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 54 - 258
Target Start/End: Complemental strand, 7277688 - 7277486
Alignment:
Q  54 tttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatc 153  Q
    |||||||||||||||| |||||| ||||||||  |||||||| ||| ||||||||||||||||||||| || ||| |||||||||||||||||||||| |    
T  7277688 tttcaaaatacatgtctattttggagaaattggagtaaccaataaaccaaataaattttgttatttttgatcaaattatgtgtgtgttttctataatacc 7277589  T
Q  154 ctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttg 253  Q
     | ||||||||||||||||||| ||        |||| ||||||||||||| | ||||| |||||||||||||||||||||||| ||||||||||| ||     
T  7277588 tttaaccatttattatttcattata--ttttttctctatctacaataaataagtaagggcattattgacaagacaataattaattttgcattgaaattta 7277491  T
Q  254 aaagt 258  Q
    |||||    
T  7277490 aaagt 7277486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 49 - 312
Target Start/End: Complemental strand, 734608 - 734348
Alignment:
Q  49 ctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctata 148  Q
    |||||||||| ||||| ||||||||||||||||||| |    |||||  ||||||||||||||||| ||| || |||||| | | ||||| |||||||||    
T  734608 ctccgtttcacaatacttgtccattttgaagaaattactcataccaaagaatcaaataaattttgtcattattgatgaaattctttgtgt-ttttctata 734510  T
Q  149 atatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaa 248  Q
    ||| ||| |  |||||||||||||||| ||         |||||||| |||| ||| | ||| |||||||||| ||  ||||||||||||||| ||||||    
T  734509 atacccttactcatttattatttcattctattatttt--tctctctataatatataggtaagagtattattgataaaccaataattaatgttgtattgaa 734412  T
Q  249 acttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    ||||||||||||||| ||  |||||||||||||||| || |||||||||||||||| |||||||    
T  734411 acttgaaagtgacaagtaaagtgaaacaaaattattctccaaaatggacaagtattgtgaaacg 734348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 49 - 324
Target Start/End: Original strand, 11319565 - 11319836
Alignment:
Q  49 ctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctata 148  Q
    |||||||||| ||||  ||||||||||||||||||| |    || ||  |||||||||||| |||| ||||||||||||| | | ||| | |||||||||    
T  11319565 ctccgtttcacaatatttgtccattttgaagaaattacacatactaatgaatcaaataaatgttgtaattttttatgaaattctttgttttttttctata 11319664  T
Q  149 atatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaa 248  Q
    ||| ||| |  |||||||||||||||| ||         ||||||||||||||||| | ||| |||||||| | ||  ||||||||||| ||||||| ||    
T  11319665 atacccttactcatttattatttcattctattatt----tctctctacaataaataggtaagagtattattaataaaccaataattaatattgcattaaa 11319760  T
Q  249 acttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatta 324  Q
    || ||||||||| |||||  |||||||||||||||| |||||||| |||||||||||||||||| | |||||||||    
T  11319761 acctgaaagtgataaataaagtgaaacaaaattattctctaaaatagacaagtattatgaaacggatgaagtatta 11319836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 94 - 310
Target Start/End: Original strand, 16054165 - 16054377
Alignment:
Q  94 aagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctc 193  Q
    ||||||| ||||||||||||||||||||||||||| | ||||| |  |||||||||||||||  |||||||||||||| ||| ||        |||||||    
T  16054165 aagaaatgaaataaattttgttattttttatgaaattttgtgttt--tttctataatatccttgaccatttattattttattctattattt--ctctctc 16054260  T
Q  194 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaat 293  Q
    |||||||||||   |||||||||||||||||   ||||||||||||||||||||||||||||||||||||  |  ||||| |||||||||| || ||||     
T  16054261 tacaataaatagataagggtattattgacaaactaataattaatgttgcattgaaacttgaaagtgacaaccaaagtgaaccaaaattattctccaaaag 16054360  T
Q  294 ggacaagtattatgaaa 310  Q
     |||| ||||| |||||    
T  16054361 cgacatgtattttgaaa 16054377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 43 - 309
Target Start/End: Original strand, 39070883 - 39071147
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgt-gtgtgtt 141  Q
    ||||| |||||||||| ||||| ||| ||||||||||||||| |    |  ||| |||||||||||| |||| |||||| |||||| | ||| |||| ||    
T  39070883 tactccctccgtttcacaatacttgttcattttgaagaaattacacatattaaggaatcaaataaatgttgtcatttttgatgaaa-tctgttgtgtttt 39070981  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| |  |||||||||||||||| ||        |||||||||||||||||| | ||| | |||||||| ||  |||||||||||||||    
T  39070982 ttctataatacccttactcatttattatttcattctattattt--ctctctctacaataaataggtaagtggattattgataaaccaataattaatgttg 39071079  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaa 309  Q
    |||||| |||| |||||||||| ||  |||||||||||||||| || ||||| |||||||||| ||||    
T  39071080 cattgatacttaaaagtgacaagtaaagtgaaacaaaattattctcaaaaatagacaagtattgtgaa 39071147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 302
Target Start/End: Complemental strand, 30403191 - 30402981
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtttt-ctataatatcctcaaccatttattatttcattttannnnnnnnctc 189  Q
    ||||||||| ||||||||||||||||||||| |||||| | ||||| | |||| ||||||||  || || ||||| |||||||||||||         ||    
T  30403191 accaagaaaccaaataaattttgttatttttgatgaaattctgtgtttttttttctataatactcttaatcatttgttatttcattttattatttt--tc 30403094  T
Q  190 tctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttcta 289  Q
    | ||| ||||||||    |||||||||||||||||  ||||||||||| ||| |||||||||| |||||||||| ||   ||||| ||||||||| ||||    
T  30403093 tttcttcaataaatggataagggtattattgacaaaccaataattaattttgtattgaaacttaaaagtgacaagtaaaatgaaataaaattattctcta 30402994  T
Q  290 aaatggacaagta 302  Q
    |||  ||||||||    
T  30402993 aaagcgacaagta 30402981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 322
Target Start/End: Complemental strand, 1056756 - 1056624
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttc 287  Q
    |||||||||||||||||   ||| |||||||||||||   ||||||||||||||||||||||||||||||||| |   ||  ||||| ||||||||| ||    
T  1056756 tctctctacaataaataaataagagtattattgacaaactaataattaatgttgcattgaaacttgaaagtgatagtaat--tgaaataaaattattctc 1056659  T
Q  288 taaaatggacaagtattatgaaacgaaggaagtat 322  Q
     ||||  |||||||||| ||||||| ||| |||||    
T  1056658 caaaagtgacaagtattgtgaaacggagggagtat 1056624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 11795392 - 11795314
Alignment:
Q  212 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaa 290  Q
    |||||||||| ||  | |||||||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||    
T  11795392 gtattattgataaacctataattaatgttgcattgaaacttgaaagtgataaataaagtgaaacaaaattattctctaa 11795314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 292
Target Start/End: Original strand, 26168075 - 26168156
Alignment:
Q  211 ggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaa 292  Q
    ||||||||| ||||   ||| |||||| ||||||||||||||||||||||||| ||  |||||||||||||||| |||||||    
T  26168075 ggtattattaacaaacaaatcattaatcttgcattgaaacttgaaagtgacaattaaagtgaaacaaaattattctctaaaa 26168156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 23098496 - 23098386
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||||||| |||||||||| |||||||||||| |       ||||||  |||||||||||||||||||| |||||| ||||||  ||||| ||||||    
T  23098496 tccgtttcaaa-tacatgtccaatttgaagaaattac-------aagaaactaaataaattttgttatttttgatgaaattatgtgcatgtttcctataa 23098405  T
Q  150 tatcctcaaccatttatta 168  Q
    || ||| ||||||||||||    
T  23098404 tacccttaaccatttatta 23098386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 11797694 - 11797765
Alignment:
Q  192 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 263  Q
    ||||||||||||| |||||||||| ||||||||   |||||||||||||| ||||||| |||||| ||||||    
T  11797694 tctacaataaataagcaagggtatcattgacaaactaataattaatgttgtattgaaatttgaaaatgacaa 11797765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 15305265 - 15305216
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaac 92  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  15305265 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 15305216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 11796451 - 11796560
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||| ||||| | ||| ||||  ||||||||||||| | |  |||||||||| |||| ||||||||||||||| |||||| | | ||||| | |    
T  11796451 tactccctccttttcacactacttgtcatttttgaagaaattacagataccaagaaattaaattaattttgttatttttgatgaaattctatgtgtttgt 11796550  T
Q  143 tctataatat 152  Q
    ||||||||||    
T  11796551 tctataatat 11796560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 12305687 - 12305728
Alignment:
Q  207 caagggtattattgacaagacaataattaatgttgcattgaa 248  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  12305687 caagggtattattgacaaaacaataatcaatgttgcattgaa 12305728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 25786003 - 25785928
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 262  Q
    ||||||||||||||||||  |||||||| || || ||| |||| | ||||||||| ||||||  ||||||||||||    
T  25786003 ctctctctacaataaataatcaagggtaataatgccaaaacaacatttaatgttgtattgaactttgaaagtgaca 25785928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 43 - 310
Target Start/End: Original strand, 10981508 - 10981774
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  10981508 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 10981607  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10981608 tctataatacccttaatcatttattatttcattttatttttct-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 10981706  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaa 310  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  10981707 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaaatattatgaaa 10981774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 43 - 322
Target Start/End: Original strand, 27813811 - 27814089
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  27813811 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtatgtgttt 27813910  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27813911 tctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaacacaataattaatgttgc 27814009  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  27814010 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 27814089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 49 - 312
Target Start/End: Complemental strand, 36453395 - 36453133
Alignment:
Q  49 ctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctata 148  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||| |||||||| |||||||||||||||| |||||||||    
T  36453395 ctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttattatttttgatgaaaatatgtgtgttttttctata 36453296  T
Q  149 atatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaa 248  Q
    ||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36453295 atacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaa 36453197  T
Q  249 acttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacg 312  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  36453196 acttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacg 36453133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 50 - 322
Target Start/End: Original strand, 40348967 - 40349239
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40348967 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 40349066  T
Q  150 tatcctcaaccatttattatttcatttta-nnnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaa 248  Q
    || ||| || |||||||||||||||||||         |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  40349067 tacccttaatcatttattatttcattttatttttctctctctctctacaataaatatgcaagggtattattgaccaaacaataattaatgttgcattgaa 40349166  T
Q  249 acttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    |||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| ||| |||||    
T  40349167 acttaaaagtgacaagtattgtgaaac-aaattattctctaaaatggacaagtattatgaaacggagggagtat 40349239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 42 - 323
Target Start/End: Original strand, 47110450 - 47110729
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||  |||||||||||  |||||||||||||||||||| ||||||||||||||||  |    
T  47110450 ttactccctccatttcaaaatacatgtccattttggagaaattgcactaaccaagaaacaaaataaattttgttatttttgatgaaaatatgtgtgt--t 47110547  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| || |||||||||||| ||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47110548 ttctataatacccttaatcatttattattttattttattttttttctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 47110647  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtatt 323  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||| | ||||||||||||||| ||| ||||||    
T  47110648 cattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatgaataagtattatgaaacggagggagtatt 47110729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 50 - 322
Target Start/End: Complemental strand, 25614621 - 25614352
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||| ||| ||||||||||||||||||||| ||||||||||||||||  |||||  ||    
T  25614621 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaaaaaaccaaataaattttgttatttttgatgaaaatatgtgtgt--tttctgaaa 25614524  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25614523 tacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 25614425  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    ||| |||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||| |||||    
T  25614424 cttaaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaattattatgaaacggagggagtat 25614352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 91 - 284
Target Start/End: Original strand, 3091565 - 3091753
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    ||||| ||||||||||||||||||||||||| |||||| | | ||||| |||||||||||| ||| ||||||||||||||||||| ||         |||    
T  3091565 accaaaaaatcaaataaattttgttatttttgatgaaattctttgtgttttttctataatacccttaaccatttattatttcattctatatt-----tct 3091659  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    |||||||||||||||| |||||||||||||||||  ||||| |||||||||||||||||||| ||| |||||| ||  ||||||||||||||||    
T  3091660 ctctacaataaatatgtaagggtattattgacaaaccaatatttaatgttgcattgaaacttaaaaatgacaagtaaagtgaaacaaaattatt 3091753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 93 - 310
Target Start/End: Original strand, 16662146 - 16662359
Alignment:
Q  93 caagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctct 192  Q
    |||||||| |||||||||||||||||||| |||||||| ||||| | ||||  |||||| ||| ||||||||||||||| ||| ||        |||| |    
T  16662146 caagaaataaaataaattttgttatttttgatgaaaatttgtgtttttttt--ataatacccttaaccatttattattttattatattcttt--ctctat 16662241  T
Q  193 ctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaa 292  Q
    |||||||||||| | |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||| || | | ||||||||||||| |  ||||    
T  16662242 ctacaataaataggtaagggtattaatgacaaatcaataattaatgttgcattgaaacttgaaagtgacaagtaatttaaaacaaaattattcttcaaaa 16662341  T
Q  293 tggacaagtattatgaaa 310  Q
      |||||||||| |||||    
T  16662342 gtgacaagtattgtgaaa 16662359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 93 - 310
Target Start/End: Original strand, 17636506 - 17636719
Alignment:
Q  93 caagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctct 192  Q
    |||||||| |||||||||||||||||||| |||||||| ||||| | ||||  |||||| ||| ||||||||||||||| ||| ||        |||| |    
T  17636506 caagaaataaaataaattttgttatttttgatgaaaatttgtgtttttttt--ataatacccttaaccatttattattttattatattcttt--ctctat 17636601  T
Q  193 ctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaa 292  Q
    |||||||||||| | |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||| || | | ||||||||||||| |  ||||    
T  17636602 ctacaataaataggtaagggtattaatgacaaatcaataattaatgttgcattgaaacttgaaagtgacaagtaatttaaaacaaaattattcttcaaaa 17636701  T
Q  293 tggacaagtattatgaaa 310  Q
      |||||||||| |||||    
T  17636702 gtgacaagtattgtgaaa 17636719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 27941113 - 27941024
Alignment:
Q  192 tctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaatt 281  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| || ||||||||||||||    
T  27941113 tctacaataaataagtaagggtattattgacaagccaataattaatgttgcaatgaaacttgaaagtgacaagtaatgtgaaacaaaatt 27941024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 91 - 263
Target Start/End: Complemental strand, 3498983 - 3498813
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    ||||| || |||||| |||||||||||||||||||||| | | ||| | ||||||||||||   | ||||||||||||||||||||||        ||||    
T  3498983 accaaaaattcaaattaattttgttattttttatgaaattttttgtatcttttctataatacttttaaccatttattatttcatttta--ttttttctct 3498886  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 263  Q
    || || |||||||||| ||| ||||||| || ||  ||||||||||| ||||||||||| ||||| |||||||    
T  3498885 ctttaaaataaatatgtaagagtattatcgataaatcaataattaattttgcattgaaagttgaatgtgacaa 3498813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 24456898 - 24456802
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    ||||||||||||| ||| |||||||||||||||| ||   | || |||||||||||||||||||||| |||||||| ||  || |||||||||||||    
T  24456898 tctctctacaatacataggcaagggtattattgataaattagtagttaatgttgcattgaaacttgagagtgacaagtaaagttaaacaaaattatt 24456802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 91 - 284
Target Start/End: Complemental strand, 7743625 - 7743435
Alignment:
Q  91 accaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctct 190  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||| |  ||||||||||| | | ||  |||||||||||||||  |         |||    
T  7743625 accaagatatcaaataaattttgttatttttgatgaaattatgtgt-ttctttctataataccgttaattatttattatttcattcaattattta--tct 7743529  T
Q  191 ctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    |||||||||||||||    | |||||| ||| ||  ||||||||||  |||||||||||||| ||| |||||||||  |||||| |||||||||    
T  7743528 ctctacaataaatatatctgagtattactgagaatccaataattaacattgcattgaaacttaaaaatgacaaataaagtgaaataaaattatt 7743435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 25060186 - 25060133
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  25060186 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 25060133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 8380082 - 8380158
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaa 264  Q
    ||||||||||||||||| | ||||||||| || ||||  |||||| |||||||| |||||||||| |||||||||||    
T  8380082 tctctctacaataaataagtaagggtatttttaacaaaccaataactaatgttgtattgaaacttaaaagtgacaaa 8380158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 263
Target Start/End: Original strand, 16360438 - 16360596
Alignment:
Q  97 aaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctac 196  Q
    ||||||||||||||||||||||||| |||||| | ||||| |  ||||||||||| ||| |||||||||||||||| || ||        ||||| ||||    
T  16360438 aaatcaaataaattttgttatttttgatgaaattctgtgttt--tttctataatacccttaaccatttattatttc-ttctattattt--ctctccctac 16360532  T
Q  197 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 263  Q
    || ||||||  ||| |||||   |||||  ||||| ||||||||| |||||||||||||||||||||    
T  16360533 aaaaaatataaaagagtatt---gacaaaccaatatttaatgttgtattgaaacttgaaagtgacaa 16360596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 27942256 - 27942184
Alignment:
Q  103 aataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcatt 175  Q
    |||||||||| |||||||| |||| | ||||||||| |||||||||||| | | |||||||||||||||||||    
T  27942256 aataaatttttttatttttaatgagattatgtgtgttttttctataatacctttaaccatttattatttcatt 27942184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 2911601 - 2911548
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||| |||||||||    
T  2911601 tactccctccatttcaaaatacatgtccattttggagaaattgcagtaaccaag 2911548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 8379945 - 8380026
Alignment:
Q  46 tctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaa 127  Q
    ||||||||||||| ||||| |||| ||||||| |||||| |    || ||||||||||||||||||||||||| || |||||    
T  8379945 tctctccgtttcacaatacttgtcgattttgaggaaattacatatactaagaaatcaaataaattttgttattgttaatgaa 8380026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 37983206 - 37983284
Alignment:
Q  93 caagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcatt 175  Q
    ||||||||||||||||||||||||||||| ||||||     | | |||||| ||||||| | | |||||||||||||||||||    
T  37983206 caagaaatcaaataaattttgttatttttgatgaaa----ttttatgttttttataatacctttaaccatttattatttcatt 37983284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 6737252 - 6737312
Alignment:
Q  206 gcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaata 266  Q
    |||||||||||||||| || |||||||||||| ||||||||||  |||||| ||| |||||    
T  6737252 gcaagggtattattgataaaacaataattaatattgcattgaactttgaaaatgataaata 6737312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 128
Target Start/End: Complemental strand, 24456958 - 24456927
Alignment:
Q  97 aaatcaaataaattttgttattttttatgaaa 128  Q
    ||||||||||||||||||||||||||||||||    
T  24456958 aaatcaaataaattttgttattttttatgaaa 24456927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 46563252 - 46563327
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 262  Q
    ||||||||||||||||||  |||||||| || || ||| |||||| ||||||||| | ||||  ||||||||||||    
T  46563252 ctctctctacaataaataatcaagggtaataatgtcaaaacaatatttaatgttgtactgaactttgaaagtgaca 46563327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 2910859 - 2910900
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaatt 84  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||    
T  2910859 tactccctccgtttcaaaatacatgtctattttaaagaaatt 2910900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 25059450 - 25059491
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaatt 84  Q
    |||| ||||||||||||||||||||||||||||  |||||||    
T  25059450 tactttctccgtttcaaaatacatgtccattttagagaaatt 25059491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 71
Target Start/End: Complemental strand, 25566809 - 25566781
Alignment:
Q  43 tactctctccgtttcaaaatacatgtcca 71  Q
    |||||||||||||||||||||||||||||    
T  25566809 tactctctccgtttcaaaatacatgtcca 25566781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 41480639 - 41480679
Alignment:
Q  208 aagggtattattgacaagacaataattaatgttgcattgaa 248  Q
    ||||||||||||||||| |||||| ||||| ||||||||||    
T  41480639 aagggtattattgacaaaacaatagttaatattgcattgaa 41480679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 42 - 321
Target Start/End: Complemental strand, 46694388 - 46694110
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||||||||||||||| ||||| |||||||||  ||| ||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  46694388 ttactccctccgtttcaaaatacatgtcctttttggagaaattgcactaatcaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 46694289  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46694288 ttctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 46694190  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  46694189 cattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 46694110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 43 - 321
Target Start/End: Original strand, 13364843 - 13365120
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  13364843 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 13364942  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13364943 tctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 13365041  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  13365042 attgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 13365120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 40 - 322
Target Start/End: Complemental strand, 23088211 - 23087930
Alignment:
Q  40 agttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtg 139  Q
    |||||||| ||| ||||||||||| ||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  23088211 agttactccctctgtttcaaaatatatgtctattttgaagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtg 23088112  T
Q  140 ttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgt 239  Q
    |||||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23088111 ttttctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgt 23088013  T
Q  240 tgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    |||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||    
T  23088012 tgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatcgacaagtattatgaaacggaggaagtat 23087930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 50 - 314
Target Start/End: Original strand, 3383083 - 3383346
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataa 149  Q
    |||||||||||||| |||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3383083 tccgtttcaaaatatatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 3383182  T
Q  150 tatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaa 249  Q
    || ||| || |||||||||||||||||||        |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3383183 tacccttaaacatttattatttcattttattttttt-ctctctctacaataaatatgcaagagtattattgacaagacaataattaatgttgcattgaaa 3383281  T
Q  250 cttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaa 314  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  3383282 cttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattataaaacgaa 3383346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 42 - 310
Target Start/End: Original strand, 198854 - 199121
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||||||||||||||||||||| |||||||||  | ||||||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  198854 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactgaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgtt 198953  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  198954 ttctataatacccttaatcatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaaaacaataattaatgttg 199052  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaa 310  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  199053 cattgaaacttgaaaatgacaaatattgtgaaacaaaattattttctaaaatggacaactattatgaaa 199121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 43 - 322
Target Start/End: Original strand, 29375138 - 29375410
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  29375138 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttcttatttttgatgaaaatatgtgtgtgttt 29375237  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| |||||||||||||||| ||||          | ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29375238 tctataatacccttaaccatttattatttctttttttt-------tttctctacaataaatatgcaagggcattattgacaagacaataattaatgttgc 29375330  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  29375331 attgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 29375410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 42 - 322
Target Start/End: Original strand, 36881281 - 36881558
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||  |    
T  36881281 ttactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgt--t 36881378  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| ||  ||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36881379 ttctataatacccttaattatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 36881477  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  36881478 cattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 36881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 43 - 322
Target Start/End: Complemental strand, 19241945 - 19241667
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||  ||||||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  19241945 tactccctccgtttcaaaatacatgtccattttggtgaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttt 19241846  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| || |||||||||||||||||||        |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  19241845 tctataatacccttaatcatttattatttcattttactttttt-ctctctctacaataaacatgcaagggtattattgacaagtcaataattaatgttgc 19241747  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    |||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  19241746 attgaaacttaaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagtat 19241667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 43 - 306
Target Start/End: Original strand, 43750137 - 43750398
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| || ||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||| |||||| ||| |||||||||    
T  43750137 tactcccttcgtttcaaaatacatgtccattttggagaaattggagtaaccaagaaaccaaataaattttgttatttttgatgaaattatatgtgtgttt 43750236  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    |||||||||  || ||||||||||||||||||| ||        ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  43750237 tctataatacacttaaccatttattatttcattctatttttt--ctctctcaacaataaatatgcaagagtattattgacaagacaataattaatgttgc 43750334  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattat 306  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| |  ||||||||||||||||||    
T  43750335 attgaaacttgaaagtgacaagtattgagaaaccaaattattctaaaaaatggacaagtattat 43750398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 212 - 323
Target Start/End: Original strand, 48820508 - 48820619
Alignment:
Q  212 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaac 311  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  48820508 gtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttttaaaatggacaagtattatgaaac 48820607  T
Q  312 gaaggaagtatt 323  Q
    | ||||||||||    
T  48820608 ggaggaagtatt 48820619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 13703356 - 13703480
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttc 287  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |     
T  13703356 tctctctgcaataaatatgcaagggtattattgacaacacaataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaatttattctt 13703455  T
Q  288 taaaatggacaagtattatgaaacg 312  Q
     | ||||||||||||||||||||||    
T  13703456 cagaatggacaagtattatgaaacg 13703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 18356002 - 18355868
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatttt 286  Q
    |||||||||||||||||| | |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| |    
T  18356002 ctctctctacaataaataagtaagggtattattgataaatcaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattct 18355903  T
Q  287 ctaaaatggacaagtattatgaaacgaaggaagta 321  Q
      |||||||||||||||| ||||||| ||| ||||    
T  18355902 tcaaaatggacaagtattgtgaaacggagggagta 18355868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 187 - 321
Target Start/End: Complemental strand, 32835123 - 32834989
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatttt 286  Q
    ||||||||||||| |||||  ||||||||||||||||| |||||| |||||||||||||||||||||||| |||||| || | |||||| |||||||| |    
T  32835123 ctctctctacaattaatatttaagggtattattgacaaaacaatacttaatgttgcattgaaacttgaaaatgacaagtactatgaaacgaaattattct 32835024  T
Q  287 ctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    ||| |||||||||||||||||||||| ||| ||||    
T  32835023 ctacaatggacaagtattatgaaacggagggagta 32834989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 311
Target Start/End: Complemental strand, 27707177 - 27706999
Alignment:
Q  131 atgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaat 230  Q
    |||| |||||||||||||||||||| |||||||||||||||| |||||        ||||  |||||||||||||| | |||||||||||||||||||||    
T  27707177 atgtatgtgttttctataatatccttaaccatttattatttctttttattttttt-ctcttactacaataaatatgta-gggtattattgacaagacaat 27707080  T
Q  231 aattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaac 311  Q
    | |||||||| |||| ||| |||||||||| ||||||||||||| |||||||||||  | |||||| || |||||||||||    
T  27707079 agttaatgttacattaaaatttgaaagtgataaatattgtgaaataaaattatttttcagaatggataaatattatgaaac 27706999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 298
Target Start/End: Complemental strand, 31873996 - 31873886
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatttt 286  Q
    |||||||| ||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| |    
T  31873996 ctctctctgcaataaatatataagggtatt-ttgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaataaaattattct 31873898  T
Q  287 ctaaaatggaca 298  Q
    ||||||||||||    
T  31873897 ctaaaatggaca 31873886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 32835226 - 32835129
Alignment:
Q  50 tccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctat 147  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||    
T  32835226 tccgtttcaaaatacatgtccattttggagaaattgcaataaccaagaaaacaaataaattttgttatttttgatgaaattatgtgtgtgttttctat 32835129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 48963262 - 48963384
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatttt 286  Q
    |||||| ||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||| ||||||||| |    
T  48963262 ctctctttacaataaatatataaggatattattgacaagacaataattaatgttgcattgaaacttaaaaatgataaatattatgaaataaaattattct 48963361  T
Q  287 ctaaaatggacaagtattatgaa 309  Q
    ||||||| || ||||| ||||||    
T  48963362 ctaaaatagataagtaatatgaa 48963384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 310
Target Start/End: Original strand, 48436368 - 48436490
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttc 287  Q
    |||||||||||||||||   ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||    
T  48436368 tctctctacaataaataattaagtgtattattgacaagctaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattattctc 48436467  T
Q  288 taaaatggacaagtattatgaaa 310  Q
     ||||  ||||| |||| |||||    
T  48436468 caaaagtgacaaatattgtgaaa 48436490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 54086696 - 54086824
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttc 287  Q
    |||||||| |||| ||| | |||||||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||   |||||||||| |||| ||    
T  54086696 tctctctataatacataggtaagggtattattgataaatcaataattaatgttgtattgaaacttgaaagtgacaaataaaatgaaacaaaagtattctc 54086795  T
Q  288 taaaatggacaagtattatgaaacgaagg 316  Q
     |||||||||||||||| ||||| |||||    
T  54086796 caaaatggacaagtattgtgaaatgaagg 54086824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 27707441 - 27707362
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttatttttt 122  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  27707441 tactccctccgtttcgaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttatttttt 27707362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 260
Target Start/End: Original strand, 37780988 - 37781152
Alignment:
Q  94 aagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctc 193  Q
    ||||||| ||||||||||| |||||||| |||||| | ||||||| ||||||||||||   | ||||||||||||||||||| ||        || ||||    
T  37780988 aagaaattaaataaattttattatttttgatgaaattctgtgtgttttttctataatactattaaccatttattatttcattcta--gtatttctttctc 37781085  T
Q  194 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtga 260  Q
    ||||||||||||  |||||||||||||||||  ||||||||||  ||| ||||||| ||||||||||    
T  37781086 tacaataaatatttaagggtattattgacaaaccaataattaactttggattgaaatttgaaagtga 37781152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 52009183 - 52009108
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 263  Q
    ||||||||||||||||| | || | |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  52009183 tctctctacaataaataggtaatgttattattgacaagacaataattaatgttgcatcgaaacttgaaagtgacaa 52009108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 164
Target Start/End: Original strand, 13702784 - 13702890
Alignment:
Q  58 aaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctca 157  Q
    |||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||| ||||||| |||||| ||| ||| |||||||||||||| | | |    
T  13702784 aaaatacatgcctattttggagaaattgcagtaaccaagaaaccaaataaattttgatatttttgatgaaattatatgtttgttttctataataccttta 13702883  T
Q  158 accattt 164  Q
    |||||||    
T  13702884 accattt 13702890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 321
Target Start/End: Original strand, 24064278 - 24064497
Alignment:
Q  97 aaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctac 196  Q
    |||| |||||||||||||||| |||||| ||| |   ||||| |||||||||||| ||| | ||||||||||||| ||| ||        ||||||||||    
T  24064278 aaattaaataaattttgttatattttataaaattcactgtgttttttctataatacccttacccatttattattttattctattattt--ctctctctac 24064375  T
Q  197 aataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatgga 296  Q
    |||||||| | ||   ||||||||| ||  |||||||||||||| |||| ||||||||||||||||  ||  |||||| ||||||||| || ||||  ||    
T  24064376 aataaataggtaa---tattattgataaaccaataattaatgttacattaaaacttgaaagtgacatgtaaagtgaaataaaattattctccaaaaacga 24064472  T
Q  297 caagtattatgaaacgaaggaagta 321  Q
    || ||||| |||||||| |||||||    
T  24064473 catgtattgtgaaacgagggaagta 24064497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 322
Target Start/End: Original strand, 26783661 - 26783747
Alignment:
Q  236 atgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagtat 322  Q
    |||||||||||||||||||||||||||| ||  |||||||||||||||| | |||||| |||||||||| | ||||| |||||||||    
T  26783661 atgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctttaaaatagacaagtattgtaaaacggaggaagtat 26783747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 6901725 - 6901828
Alignment:
Q  208 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatg 307  Q
    |||| ||||||||| ||  |||| ||||||||||||||||||||| |||||||||| ||  |||||||||||||||| || ||||||||||| |||| ||    
T  6901725 aaggatattattgataaatcaatgattaatgttgcattgaaacttaaaagtgacaagtaaagtgaaacaaaattattctccaaaatggacaa-tattgtg 6901823  T
Q  308 aaacg 312  Q
    |||||    
T  6901824 aaacg 6901828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 19897152 - 19897072
Alignment:
Q  95 agaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcatt 175  Q
    |||||||||||||||||||||||||||||||||| | | ||||| |||||||||||| ||| |  | ||||||||||||||    
T  19897152 agaaatcaaataaattttgttattttttatgaaattctttgtgttttttctataatacccttactcttttattatttcatt 19897072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 285
Target Start/End: Complemental strand, 53559837 - 53559647
Alignment:
Q  93 caagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctct 192  Q
    ||||||| ||||||||| ||||||||||| |||||| | | ||||| || | ||  ||||||| | || |||||||||||||||||         | |||    
T  53559837 caagaaaacaaataaatgttgttatttttgatgaaattctctgtgttttatttacgatatccttacccgtttattatttcattttattattta--tttct 53559740  T
Q  193 ctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattt 285  Q
    |||||||||||| | ||  |||||||| | ||  |||| ||||||||||||||||||||||| |||||||| ||   ||||||||||||||||    
T  53559739 ctacaataaataagtaacagtattattaataaatcaatgattaatgttgcattgaaacttgagagtgacaagtaaattgaaacaaaattattt 53559647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 12094582 - 12094635
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  12094582 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 12094635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 94 - 284
Target Start/End: Complemental strand, 1455374 - 1455188
Alignment:
Q  94 aagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcattttannnnnnnnctctctc 193  Q
    |||||||||||||||||||||||||||| || ||| ||| ||||| | |||||||||   ||  |||||||||||||| ||| ||         || |||    
T  1455374 aagaaatcaaataaattttgttatttttgataaaattatttgtgtttcttctataattctcttcaccatttattatttaattatataatt----tccctc 1455279  T
Q  194 tacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    |||  || ||| | |||| | ||||||||||  ||||||||||||||||||||||| | ||||||||||| ||  || ||||||| |||||    
T  1455278 tacggtagataggtaaggatgttattgacaaaccaataattaatgttgcattgaaattggaaagtgacaagtaaagtaaaacaaatttatt 1455188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 19911508 - 19911562
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  19911508 ttactccctccgtttcaaaatacatgttcattttggagaaattgcagtaaccaag 19911562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 37293437 - 37293522
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaa 128  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| |    |||||| |||||||||||| |||| |||||| ||||||    
T  37293437 tactccctccgtttcacaatacttgtccattttgaagaaattacacataccaaggaatcaaataaatgttgtcatttttgatgaaa 37293522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 44277508 - 44277455
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  44277508 tactccctccgtttcaaaatacatgtctattttggagaaattgcagtaaccaag 44277455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 48820512 - 48820444
Alignment:
Q  60 aatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaa 128  Q
    |||||||||  |||||| ||||||| ||||| |||| ||| ||||||||||||||||||||| ||||||    
T  48820512 aatacatgtttattttggagaaattacggtatccaataaaccaaataaattttgttatttttgatgaaa 48820444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 37293554 - 37293644
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaat 280  Q
    |||||||||||||||||| | ||||||| |||||| ||   |  ||||||||||||||||||||||||||| ||||| ||   |||||||||||    
T  37293554 ctctctctacaataaataggtaagggtaatattgataa---atcaattaatgttgcattgaaacttgaaagggacaagtaaaatgaaacaaaat 37293644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 44522491 - 44522567
Alignment:
Q  93 caagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattattt 171  Q
    |||||||||||||||||||| |||||||||||||||  |  ||||| ||||||||||||   | |||||||||||||||    
T  44522491 caagaaatcaaataaattttattattttttatgaaatca--tgtgttttttctataatacttttaaccatttattattt 44522567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 44276774 - 44276816
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaatt 84  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  44276774 ttactctctccgtttcaaaatacatgtccattttagagaaatt 44276816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 46188909 - 46188967
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 245  Q
    |||||||||||||||||| |||||  ||||||||||||  |||||||||||||| ||||    
T  46188909 ctctctctacaataaataagcaagaatattattgacaaaccaataattaatgttacatt 46188967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 48963156 - 48963223
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaatttt 112  Q
    ||||| |||||||||||||||||| || |||||| |||||||||  ||||||| ||||||||||| ||||    
T  48963156 tactccctccgtttcaaaatacatatctattttggagaaattgc--taaccaataaatcaaataattttt 48963223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 52805155 - 52805085
Alignment:
Q  193 ctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaa 263  Q
    ||||||| |||| | |||||| ||||||| ||  ||||||| |||||||||| ||||||||||||||||||    
T  52805155 ctacaattaataagtaagggtgttattgataaatcaataataaatgttgcatcgaaacttgaaagtgacaa 52805085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 38805245 - 38805298
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||| |||||||| ||||||||||||||||||  ||||||||| |||||||||    
T  38805245 tactccctccgttttaaaatacatgtccattttagagaaattgcagtaaccaag 38805298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 40228337 - 40228280
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcatt 245  Q
    ||||||||||||||||| | ||| || ||||| ||||| |||||||||||||||||||    
T  40228337 tctctctacaataaataagtaagagttttattaacaagccaataattaatgttgcatt 40228280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 17755221 - 17755284
Alignment:
Q  109 ttttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttc 172  Q
    |||| ||||||||||||||  ||| ||||| |||||||||||||| | || |||||||||||||    
T  17755221 tttttttattttttatgaatttatttgtgttttttctataatatctttaatcatttattatttc 17755284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 19056541 - 19056604
Alignment:
Q  109 ttttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttc 172  Q
    |||| ||||||||||||||  ||| ||||| |||||||||||||| | || |||||||||||||    
T  19056541 tttttttattttttatgaatttatttgtgttttttctataatatctttaatcatttattatttc 19056604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 23771401 - 23771326
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 262  Q
    ||||||||||||||||||  |||||||| ||  |  || |||||| ||||||||||||||||  ||||||||||||    
T  23771401 ctctctctacaataaataatcaagggtaataaaggtaaaacaatatttaatgttgcattgaactttgaaagtgaca 23771326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 32980754 - 32980679
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 262  Q
    ||||||||||||||||||   ||||||| |||||| || ||| || ||||||||| ||||||  ||||||||||||    
T  32980754 ctctctctacaataaataactaagggtaatattgataaaacattatttaatgttgtattgaattttgaaagtgaca 32980679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 43159893 - 43159967
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 262  Q
    ||||||| ||||||||||  ||||||| |||||| ||  ||| | ||||||||||||||||  ||||||||||||    
T  43159893 tctctctgcaataaatatttaagggtaatattgataaatcaacatttaatgttgcattgaattttgaaagtgaca 43159967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 19912215 - 19912174
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaatt 84  Q
    ||||| |||||||||||||||||||||||||||  |||||||    
T  19912215 tactccctccgtttcaaaatacatgtccattttagagaaatt 19912174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 71
Target Start/End: Original strand, 21797555 - 21797584
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtcca 71  Q
    ||||||||||||||||||||||||||||||    
T  21797555 ttactctctccgtttcaaaatacatgtcca 21797584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 38806382 - 38806341
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaatt 84  Q
    ||||| |||||||||||||||||||||||||||  |||||||    
T  38806382 tactccctccgtttcaaaatacatgtccattttagagaaatt 38806341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 42 - 321
Target Start/End: Original strand, 169 - 438
Alignment:
Q  42 ttactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgtt 141  Q
    |||||| |||||||||||||||||| |||| |||| ||||||||| ||||||||        ||||||||||||||||||||||||||||||||||||||    
T  169 ttactccctccgtttcaaaatacatatccactttggagaaattgcagtaaccaa--------ataaattttgttattttttatgaaaatatgtgtgtgtt 260  T
Q  142 ttctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttg 241  Q
    |||||||||| ||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  261 ttctataatacccttaaccatttattatttcattttattttttt-ctctctctacaataaatatgcaagggtattattgacaagacaata-ttaatgttg 358  T
Q  242 cattgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  359 cattgaaacttgaaagtgacaagtattgtgaaacaaaattattttctaaaatggacaagtattatgaaacggagggagta 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 43 - 321
Target Start/End: Original strand, 45454 - 45730
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||   |||||||||| ||||||||||||||||||||| |||||| ||||||||| |||    
T  45454 tactccctccgtttcaaaatacatgttcattttggagaaattgcaccaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtattt 45553  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgc 242  Q
    ||||||||| ||| ||||||||||||||| ||| ||        |||| ||||||||||||||  |||| ||||||||| || |||||||||||| ||||    
T  45554 tctataatacccttaaccatttattattttattcta--ttttttctctttctacaataaatatttaaggttattattgataatacaataattaatattgc 45651  T
Q  243 attgaaacttgaaagtgacaaatattgtgaaacaaaattattttctaaaatggacaagtattatgaaacgaaggaagta 321  Q
    ||||||| ||||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  45652 attgaaatttgaaagagacatgtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacggagggagta 45730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 176 - 1
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttt 142  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  176 tactctctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 77  T
Q  143 tctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattatt 219  Q
    ||||||||| ||| || |||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  76 tctataatacccttaatcatttattatttcatttta-tttttttctctctctacaataaatatgcaagggtattatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 58 - 301
Target Start/End: Complemental strand, 525 - 287
Alignment:
Q  58 aaaatacatgtccattttgaagaaattgcggtaaccaagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctca 157  Q
    ||||||||||| |||||||  |||||||| |||| ||| ||||||||||||||||||||||||| || ||| ||||||||| ||||  |||||| ||| |    
T  525 aaaatacatgttcattttggcgaaattgcagtaatcaaaaaatcaaataaattttgttatttttgataaaattatgtgtgtttttt--ataataccctta 428  T
Q  158 accatttattatttcattttannnnnnnnctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaag 257  Q
    | |||||||||||||||| ||        |||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| ||| || ||||    
T  427 atcatttattatttcattctattttt---ctctctctacaataaatatgtaatgatattattgacaagacaataattaatgttgcattaaaatttaaaag 331  T
Q  258 tgacaaatattgtgaaacaaaattattttctaaaatggacaagt 301  Q
    |||||| |||||||||||||||||||| ||||||||||||||||    
T  330 tgacaagtattgtgaaacaaaattattctctaaaatggacaagt 287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 311
Target Start/End: Complemental strand, 7033 - 6911
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattttc 287  Q
    ||||||||||||||||| | ||| |||||||||||| | |||||||||||||||||||||||||| |||  |||||||| | ||||||||||||||| ||    
T  7033 tctctctacaataaataagtaagagtattattgacacgtcaataattaatgttgcattgaaactt-aaacggacaaataatatgaaacaaaattattctc 6935  T
Q  288 taaaatggacaagtattatgaaac 311  Q
     ||||  |||||||||| ||||||    
T  6934 caaaaacgacaagtattgtgaaac 6911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 7811 - 7935
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatttt 286  Q
    |||||| ||||||||||| | ||| |||||||||||||  | ||||||||||||||||| ||||||||||||||||| || ||||||  ||||||||| |    
T  7811 ctctctttacaataaataggtaagagtattattgacaaaccgataattaatgttgcattaaaacttgaaagtgacaagtaatgtgaattaaaattattct 7910  T
Q  287 ctaaaatggacaagtattatgaaac 311  Q
     |||||  |||||||||| ||||||    
T  7911 ttaaaaacgacaagtattgtgaaac 7935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 109 - 284
Target Start/End: Complemental strand, 65375 - 65202
Alignment:
Q  109 ttttgttattttttatgaaaatatgtgtgtgtttt-ctataatatcctcaaccatttattatttcattttannnnnnnnctctctctacaataaatatgc 207  Q
    |||| |||||||| |||||| ||| ||||| |||| |||||||| ||| ||||||||||||||||||| ||        |||| |||||| ||||||       
T  65375 ttttattatttttgatgaaattatatgtgtttttttctataatacccttaaccatttattatttcattctatttttt--ctctttctaca-taaatagat 65279  T
Q  208 aagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatt 284  Q
    |||||||||||||||||  ||||||||||| ||||||||||| || |||||||||| || | |||||||||||||||    
T  65278 aagggtattattgacaaaccaataattaatattgcattgaaatttaaaagtgacaagtaatatgaaacaaaattatt 65202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 70874 - 70956
Alignment:
Q  93 caagaaatcaaataaattttgttattttttatgaaaatatgtgtgtgttttctataatatcctcaaccatttattatttcatt 175  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||| |||||| ||| | ||| |||||||||||||||||||    
T  70874 caagaaatcaaataaattttgttatttttgatgaaattctgtgtgttttttctgtaacacccttaaccatttattatttcatt 70956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 71226 - 71350
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattatttt 286  Q
    |||| ||||||||||||| | |||||||| ||| ||||  ||||||||||| ||||||| |||||| |||||||||| || ||||||| ||||||||| |    
T  71226 ctctatctacaataaataggtaagggtataattaacaaaccaataattaattttgcattcaaacttaaaagtgacaagtaatgtgaaataaaattattct 71325  T
Q  287 ctaaaatggacaagtattatgaaac 311  Q
      ||||  |||||||||| ||||||    
T  71326 tcaaaaacgacaagtattgtgaaac 71350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 23467 - 23520
Alignment:
Q  43 tactctctccgtttcaaaatacatgtccattttgaagaaattgcggtaaccaag 96  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  23467 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 23520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 15456 - 15386
Alignment:
Q  188 tctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagt 258  Q
    ||||||||||||||| | | ||| |||||||||||||  | |||||||||||||||||||||||| |||||    
T  15456 tctctctacaataaaaaagtaagcgtattattgacaaaccgataattaatgttgcattgaaacttaaaagt 15386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 252708 - 252633
Alignment:
Q  187 ctctctctacaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 262  Q
    ||||||||||||||||||  |||||||| ||  ||||| |||||| ||||||||| ||||||  ||||||||||||    
T  252708 ctctctctacaataaataatcaagggtaataaagacaaaacaatatttaatgttgtattgaactttgaaagtgaca 252633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 147263 - 147330
Alignment:
Q  195 acaataaatatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgaca 262  Q
    |||||||||||  ||||||| |||||| || |||| | ||||||||||||||||  ||||||||||||    
T  147263 acaataaatatctaagggtaatattgataaaacaacatttaatgttgcattgaactttgaaagtgaca 147330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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