View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8772_low_2 (Length: 218)

Name: NF8772_low_2
Description: NF8772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8772_low_2
NF8772_low_2
[»] chr4 (21 HSPs)
chr4 (12-218)||(3771461-3771667)
chr4 (102-218)||(3755703-3755819)
chr4 (107-217)||(3762822-3762935)
chr4 (71-210)||(3751844-3751989)
chr4 (110-210)||(3781217-3781320)
chr4 (24-70)||(10731940-10731986)
chr4 (24-70)||(10945709-10945755)
chr4 (25-63)||(18079450-18079488)
chr4 (110-218)||(3767225-3767336)
chr4 (26-63)||(6519137-6519174)
chr4 (78-216)||(3746021-3746165)
chr4 (131-218)||(3776896-3776986)
chr4 (24-63)||(7197982-7198021)
chr4 (24-70)||(9192985-9193031)
chr4 (26-71)||(16393431-16393477)
chr4 (25-63)||(24124525-24124563)
chr4 (26-63)||(10632133-10632170)
chr4 (26-63)||(15255710-15255747)
chr4 (26-63)||(36515267-36515304)
chr4 (26-62)||(14690121-14690157)
chr4 (27-63)||(15249084-15249120)
[»] chr6 (19 HSPs)
chr6 (24-70)||(29254731-29254777)
chr6 (24-71)||(26139417-26139464)
chr6 (25-63)||(18327280-18327318)
chr6 (24-70)||(20217777-20217823)
chr6 (24-70)||(22111802-22111848)
chr6 (26-63)||(19563193-19563230)
chr6 (25-70)||(24544922-24544967)
chr6 (24-68)||(25922681-25922725)
chr6 (28-71)||(6795698-6795741)
chr6 (24-71)||(26018713-26018760)
chr6 (25-63)||(28079797-28079835)
chr6 (26-63)||(5670182-5670219)
chr6 (26-63)||(12473827-12473864)
chr6 (26-63)||(15154449-15154486)
chr6 (26-63)||(15158907-15158944)
chr6 (26-63)||(18280051-18280088)
chr6 (26-63)||(18733113-18733150)
chr6 (26-63)||(19560189-19560226)
chr6 (23-63)||(30670565-30670605)
[»] chr3 (17 HSPs)
chr3 (24-73)||(20224525-20224574)
chr3 (25-63)||(5688441-5688479)
chr3 (24-70)||(17051487-17051533)
chr3 (26-63)||(17481241-17481278)
chr3 (26-63)||(20151260-20151297)
chr3 (24-63)||(14347384-14347423)
chr3 (24-71)||(22039573-22039620)
chr3 (24-71)||(27407959-27408006)
chr3 (25-63)||(2782014-2782052)
chr3 (25-63)||(5225769-5225807)
chr3 (32-70)||(11823756-11823794)
chr3 (24-70)||(13419135-13419181)
chr3 (25-63)||(14494098-14494136)
chr3 (25-63)||(19655386-19655424)
chr3 (26-63)||(20155708-20155745)
chr3 (26-63)||(43496967-43497004)
chr3 (26-63)||(53354088-53354125)
[»] chr1 (15 HSPs)
chr1 (26-63)||(18884682-18884719)
chr1 (24-63)||(41462494-41462533)
chr1 (25-63)||(39285907-39285945)
chr1 (26-63)||(16364640-16364677)
chr1 (25-63)||(1593926-1593964)
chr1 (28-70)||(16069182-16069224)
chr1 (25-63)||(19787567-19787605)
chr1 (24-70)||(20413004-20413050)
chr1 (25-63)||(22635012-22635050)
chr1 (25-63)||(25727704-25727742)
chr1 (25-63)||(25736112-25736150)
chr1 (26-63)||(4029066-4029103)
chr1 (26-63)||(8654523-8654560)
chr1 (26-63)||(8952778-8952815)
chr1 (26-63)||(46090917-46090954)
[»] scaffold0275 (1 HSPs)
scaffold0275 (24-71)||(1100-1148)
[»] chr7 (20 HSPs)
chr7 (24-75)||(9257955-9258007)
chr7 (24-75)||(9312246-9312298)
chr7 (25-63)||(5398489-5398527)
chr7 (25-63)||(13457449-13457487)
chr7 (26-63)||(14941031-14941068)
chr7 (26-63)||(15368624-15368661)
chr7 (26-63)||(20114486-20114523)
chr7 (26-63)||(21507749-21507786)
chr7 (26-70)||(46274845-46274889)
chr7 (25-71)||(9010369-9010416)
chr7 (24-70)||(8786574-8786620)
chr7 (25-63)||(9193279-9193317)
chr7 (24-70)||(9562599-9562645)
chr7 (25-63)||(12797883-12797921)
chr7 (25-63)||(16076100-16076138)
chr7 (25-63)||(33611548-33611586)
chr7 (26-63)||(5841437-5841474)
chr7 (26-63)||(12547595-12547632)
chr7 (26-63)||(38387447-38387484)
chr7 (26-63)||(48781161-48781198)
[»] scaffold0713 (1 HSPs)
scaffold0713 (24-71)||(5992-6039)
[»] scaffold0036 (1 HSPs)
scaffold0036 (24-71)||(110834-110881)
[»] chr8 (19 HSPs)
chr8 (24-63)||(43835578-43835617)
chr8 (25-63)||(37818502-37818540)
chr8 (26-63)||(14350930-14350967)
chr8 (26-63)||(18229928-18229965)
chr8 (26-63)||(21328047-21328084)
chr8 (26-63)||(22831913-22831950)
chr8 (26-62)||(18400043-18400079)
chr8 (26-73)||(39729988-39730036)
chr8 (24-63)||(21950877-21950916)
chr8 (24-63)||(21956679-21956718)
chr8 (24-63)||(22285741-22285780)
chr8 (24-63)||(22371323-22371362)
chr8 (24-63)||(26013680-26013719)
chr8 (28-70)||(1989780-1989822)
chr8 (25-63)||(17515160-17515198)
chr8 (25-63)||(20037767-20037805)
chr8 (25-63)||(21842309-21842347)
chr8 (25-63)||(21858121-21858159)
chr8 (24-68)||(22725117-22725161)
[»] scaffold0388 (1 HSPs)
scaffold0388 (25-63)||(16260-16298)
[»] scaffold0230 (1 HSPs)
scaffold0230 (25-63)||(17037-17075)
[»] scaffold0168 (1 HSPs)
scaffold0168 (25-63)||(8127-8165)
[»] chr5 (10 HSPs)
chr5 (24-70)||(2952928-2952974)
chr5 (24-70)||(20739086-20739132)
chr5 (24-70)||(31757433-31757479)
chr5 (26-63)||(20246327-20246364)
chr5 (25-63)||(12323025-12323063)
chr5 (28-70)||(20167479-20167521)
chr5 (25-63)||(20449119-20449157)
chr5 (25-63)||(21999811-21999849)
chr5 (26-71)||(42789109-42789155)
chr5 (26-63)||(14483159-14483196)
[»] chr2 (17 HSPs)
chr2 (25-71)||(23698110-23698156)
chr2 (24-70)||(41652912-41652958)
chr2 (25-70)||(22438066-22438111)
chr2 (26-63)||(25038219-25038256)
chr2 (24-64)||(20652-20692)
chr2 (24-71)||(22329211-22329258)
chr2 (24-63)||(23341317-23341356)
chr2 (28-63)||(25369617-25369652)
chr2 (25-71)||(25482135-25482182)
chr2 (25-71)||(25489741-25489788)
chr2 (25-63)||(20244808-20244846)
chr2 (25-63)||(23800185-23800223)
chr2 (24-70)||(25857877-25857923)
chr2 (25-63)||(40916093-40916131)
chr2 (26-63)||(23634692-23634729)
chr2 (26-63)||(23649518-23649555)
chr2 (25-72)||(30313460-30313508)
[»] scaffold0673 (1 HSPs)
scaffold0673 (26-63)||(2500-2537)
[»] scaffold0637 (1 HSPs)
scaffold0637 (26-63)||(2128-2165)
[»] scaffold0560 (1 HSPs)
scaffold0560 (25-62)||(2571-2608)
[»] scaffold0512 (1 HSPs)
scaffold0512 (26-63)||(6499-6536)
[»] scaffold0026 (1 HSPs)
scaffold0026 (25-73)||(135110-135159)
[»] scaffold0011 (1 HSPs)
scaffold0011 (26-63)||(163251-163288)
[»] scaffold1095 (1 HSPs)
scaffold1095 (24-71)||(198-246)
[»] scaffold0278 (1 HSPs)
scaffold0278 (24-63)||(11845-11884)
[»] scaffold0056 (1 HSPs)
scaffold0056 (24-63)||(69960-69999)
[»] scaffold0009 (2 HSPs)
scaffold0009 (26-61)||(149835-149870)
scaffold0009 (26-60)||(245202-245236)
[»] scaffold0001 (1 HSPs)
scaffold0001 (24-63)||(181978-182017)
[»] scaffold1403 (1 HSPs)
scaffold1403 (25-63)||(1654-1692)
[»] scaffold0509 (1 HSPs)
scaffold0509 (25-63)||(435-473)
[»] scaffold0471 (1 HSPs)
scaffold0471 (25-63)||(9113-9151)
[»] scaffold0360 (1 HSPs)
scaffold0360 (25-63)||(5408-5446)
[»] scaffold0218 (1 HSPs)
scaffold0218 (25-63)||(16903-16941)
[»] scaffold0096 (1 HSPs)
scaffold0096 (25-63)||(37313-37351)
[»] scaffold0084 (1 HSPs)
scaffold0084 (25-63)||(44627-44665)
[»] scaffold0031 (1 HSPs)
scaffold0031 (25-63)||(17322-17360)
[»] scaffold0022 (2 HSPs)
scaffold0022 (25-63)||(79191-79229)
scaffold0022 (26-63)||(111325-111362)
[»] scaffold1496 (1 HSPs)
scaffold1496 (26-63)||(1642-1679)
[»] scaffold0532 (1 HSPs)
scaffold0532 (26-63)||(4403-4440)
[»] scaffold0317 (1 HSPs)
scaffold0317 (26-63)||(13524-13561)
[»] scaffold0113 (2 HSPs)
scaffold0113 (26-63)||(803-840)
scaffold0113 (26-63)||(42787-42824)
[»] scaffold0042 (1 HSPs)
scaffold0042 (26-63)||(55955-55992)
[»] scaffold0006 (1 HSPs)
scaffold0006 (26-63)||(34747-34784)
[»] scaffold0003 (1 HSPs)
scaffold0003 (26-63)||(216580-216617)


Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 12 - 218
Target Start/End: Complemental strand, 3771667 - 3771461
Alignment:
Q  12 atgaaccgtgtactttttactacttcgatagaactgtacacttgcggttttactcatcacttcccctctcatgcaacaccatcacttcaacatcatcatc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3771667 atgaaccgtgtactttttactacttcgatagaactgtacacttgcggttttactcatcacttcccctctcatgcaacaccatcacttcaacatcatcatc 3771568  T
Q  112 atcagaaaatgatgacacttttgaatttgttcgtcctatagaccgcaaattattaagcctaaagaaggaaaaactaagtcatttcagattctactggcac 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3771567 atcagaaaatgatgacacttttgaatttgttcgtcctatagaccgcaaattattaagcctaaagaaggaaaaactaagtcatttcagattctactggcac 3771468  T
Q  212 gacatag 218  Q
    || ||||    
T  3771467 gagatag 3771461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 3755819 - 3755703
Alignment:
Q  102 catcatcatcatcagaaaatgatgacacttttgaatttgttcgtcctatagaccgcaaattattaagcctaaagaaggaaaaactaagtcatttcagatt 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3755819 catcatcatcatcagaaaatggtgacacttttgaatttgttcgtcctatagaccgcaaattattaagcctaaagaaggaaaaactaagtcatttcagatt 3755720  T
Q  202 ctactggcacgacatag 218  Q
    |||||||||||||||||    
T  3755719 ctactggcacgacatag 3755703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 3762935 - 3762822
Alignment:
Q  107 tcatcatcagaaaatgatgacacttttgaatttgttcgtcctatagaccgcaaattattaagccta---aagaaggaaaaactaagtcatttcagattct 203  Q
    ||||||||||||||||| || |||||||| ||||||||||| ||||||||||| || ||| |||||   ||||||||||||||||| ||||| |||||||    
T  3762935 tcatcatcagaaaatgaagaaacttttgattttgttcgtccaatagaccgcaagttgttaggcctaaacaagaaggaaaaactaagccattttagattct 3762836  T
Q  204 actggcacgacata 217  Q
    ||||||| ||||||    
T  3762835 actggcatgacata 3762822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 71 - 210
Target Start/End: Complemental strand, 3751989 - 3751844
Alignment:
Q  71 cttcccctctcatgcaacaccatcacttcaacatcatca---tcatcagaaaatgatgacacttttgaatttgttcgtcctatagaccgcaaattattaa 167  Q
    |||| |||||| ||||||||  ||||||||||||||| |   |||| ||||||  | || |||||||| ||||||||||| |||||||||||||| ||||    
T  3751989 cttctcctctcttgcaacactctcacttcaacatcattacaatcattagaaaaacaagaaacttttgattttgttcgtccaatagaccgcaaattgttaa 3751890  T
Q  168 gccta---aagaaggaaaaactaagtcatttcagattctactggca 210  Q
    |||||   ||||| |||||||||||||||||||||||||| |||||    
T  3751889 gcctaaacaagaaagaaaaactaagtcatttcagattctattggca 3751844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 3781320 - 3781217
Alignment:
Q  110 tcatcagaaaatgatgacacttttgaatttgttcgtcctatagaccgcaaattattaagccta---aagaaggaaaaactaagtcatttcagattctact 206  Q
    |||||||||||  | |||||||| || ||||||||||| ||||| |||||||| ||| |||||   ||||| ||||| |||||||||||||||||||| |    
T  3781320 tcatcagaaaaacaagacactttcgattttgttcgtccgatagatcgcaaattgttaggcctaaacaagaaagaaaagctaagtcatttcagattctatt 3781221  T
Q  207 ggca 210  Q
    ||||    
T  3781220 ggca 3781217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 10731940 - 10731986
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    |||||||||||||||||||||| || |||||||||||||||||||||    
T  10731940 ctttttactacttcgatagaaccgtgcacttgcggttttactcatca 10731986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 10945709 - 10945755
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    |||||||||||||||||||||| || |||||||||||||||||||||    
T  10945709 ctttttactacttcgatagaaccgtgcacttgcggttttactcatca 10945755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 18079450 - 18079488
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  18079450 tttttactacttcgatagaaccgtacacttgcggtttta 18079488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 218
Target Start/End: Complemental strand, 3767336 - 3767225
Alignment:
Q  110 tcatcagaaaatgatgacacttttgaatttgttcgtcctatagaccgcaaattattaagcctaaa---gaaggaaaaactaagtcatttcagattctact 206  Q
    |||||||||||  | |||||  |||| ||||||||||| ||||| ||||| || ||| |||||||   ||||||||| ||||||||||||| ||| || |    
T  3767336 tcatcagaaaaacaagacacagttgattttgttcgtccaatagatcgcaagttgttaggcctaaacaagaaggaaaagctaagtcatttcaaattttatt 3767237  T
Q  207 ggcacgacatag 218  Q
    |||| |||||||    
T  3767236 ggcatgacatag 3767225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 6519137 - 6519174
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  6519137 ttttactacttcgatagaaccgtacacttgcggtttta 6519174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 216
Target Start/End: Complemental strand, 3746165 - 3746021
Alignment:
Q  78 tctcatgcaacaccatcacttcaacatcatcatcatca---gaaaatgatgacacttttgaatttgttcgtcctatagaccgcaaattattaagcctaaa 174  Q
    |||| ||||||||| |||||||||| |||||| |||||   ||||| || || |||| ||| ||||||||| | ||||||| |||||| |||  ||||||    
T  3746165 tctcttgcaacaccctcacttcaacttcatcaccatcatttgaaaaagaagaaacttatgattttgttcgttcaatagaccccaaattgttacacctaaa 3746066  T
Q  175 gaag---gaaaaactaagtcatttcagattctactggcacgacat 216  Q
     ||    ||||| |||||||||||||||||||  ||||| |||||    
T  3746065 caaccaagaaaagctaagtcatttcagattcttttggcatgacat 3746021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 3776986 - 3776896
Alignment:
Q  131 tttgaatttgttcgtcctatagaccgcaaattattaagcctaaa---gaaggaaaaactaagtcatttcagattctactggcacgacatag 218  Q
    ||||| ||||||||||| ||||| ||||| || ||| |||||||   ||||||||| ||||||||||||| ||| || ||||| |||||||    
T  3776986 tttgattttgttcgtccaatagatcgcaagttgttaggcctaaacaagaaggaaaagctaagtcatttcaaattatattggcatgacatag 3776896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 7197982 - 7198021
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  7197982 ctttttactaattcgatagaactgtgcacttgcggtttta 7198021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 9192985 - 9193031
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||| ||||||||| |||||| || |||||||||||||||||||||    
T  9192985 cttttcactacttcggtagaaccgtgcacttgcggttttactcatca 9193031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 16393431 - 16393477
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta-ctcatcac 71  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||||||    
T  16393431 ttttactactccgatagaaccgtacacttgcggttttatctcatcac 16393477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 24124563 - 24124525
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  24124563 tttttactacttcgatagaaccgtgcacttgcggtttta 24124525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 10632133 - 10632170
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  10632133 ttttactacttcgatagaaccgtgcacttgcggtttta 10632170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 15255710 - 15255747
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  15255710 ttttactacttcgatagaaccgtgcacttgcggtttta 15255747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 36515304 - 36515267
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  36515304 ttttactacttcgatagaaccgtgcacttgcggtttta 36515267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 14690157 - 14690121
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttt 62  Q
    |||||||||||||||||||| || |||||||||||||    
T  14690157 ttttactacttcgatagaaccgtgcacttgcggtttt 14690121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 15249084 - 15249120
Alignment:
Q  27 tttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||| || ||||||||||||||    
T  15249084 tttactacttcgatagaaccgtgcacttgcggtttta 15249120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 29254731 - 29254777
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  29254731 ctttttactacttcggtagaactgtgcacttgcggttttactcatca 29254777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 26139417 - 26139464
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatcac 71  Q
    ||||||| |||||||||||||| || ||||||||||||||||||||||    
T  26139417 ctttttattacttcgatagaaccgtgcacttgcggttttactcatcac 26139464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 18327318 - 18327280
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  18327318 tttttactacttcgatagaactgtgcacttgcggtttta 18327280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 20217823 - 20217777
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||    
T  20217823 ctttttactacttcggtagaaccgtgcacttgcggttttactcatca 20217777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 22111848 - 22111802
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||    
T  22111848 ctttttactacttcggtagaaccgtgcacttgcggttttactcatca 22111802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 19563230 - 19563193
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  19563230 ttttactacttcgatagaaccgtacacttgcggtttta 19563193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 24544967 - 24544922
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    |||||||||||||| |||||| || |||||||||||||||||||||    
T  24544967 tttttactacttcggtagaaccgtgcacttgcggttttactcatca 24544922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 25922725 - 25922681
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcat 68  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||    
T  25922725 cttttaactacttcggtagaactgtgcacttgcggttttactcat 25922681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 6795698 - 6795741
Alignment:
Q  28 ttactacttcgatagaactgtacacttgcggttttactcatcac 71  Q
    ||||||||||| |||||| || ||||||||||||||||||||||    
T  6795698 ttactacttcggtagaaccgtgcacttgcggttttactcatcac 6795741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 26018713 - 26018760
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatcac 71  Q
    ||||||| |||||||||||||| || |||||||||||||| |||||||    
T  26018713 ctttttattacttcgatagaaccgtgcacttgcggttttaatcatcac 26018760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 28079835 - 28079797
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  28079835 tttttactacttcggtagaactgtgcacttgcggtttta 28079797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 5670219 - 5670182
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  5670219 ttttactacttcgatagaaccgtacacttgcagtttta 5670182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 12473864 - 12473827
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  12473864 ttttactacttcgatagaaccgtgcacttgcggtttta 12473827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 15154449 - 15154486
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  15154449 ttttgctacttcgatagaaccgtacacttgcggtttta 15154486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 15158907 - 15158944
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  15158907 ttttgctacttcgatagaaccgtacacttgcggtttta 15158944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 18280088 - 18280051
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  18280088 ttttactaattcgatagaaccgtacacttgcggtttta 18280051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 18733113 - 18733150
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  18733113 ttttactactccgatagaaccgtacacttgcggtttta 18733150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 19560226 - 19560189
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  19560226 ttttactacttcgatagaaccgtaaacttgcggtttta 19560189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 30670605 - 30670565
Alignment:
Q  23 actttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||| |||| || ||||||||||||||    
T  30670605 actttttactacttcgattgaaccgtgcacttgcggtttta 30670565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 20224574 - 20224525
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatcactt 73  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||||    
T  20224574 ctttttactacttcggtagaaccgtgcacttgcggttttactcatcactt 20224525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 5688441 - 5688479
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  5688441 tttttactacttcgatagaaccgtacacttgcggtttta 5688479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 17051487 - 17051533
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||    
T  17051487 ctttttactacttcggtagaaccgtgcacttgcggttttactcatca 17051533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 17481241 - 17481278
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  17481241 ttttactacttcgatagaaccgtacacttgcggtttta 17481278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 20151260 - 20151297
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  20151260 ttttactacttcgatagaaccgtacacttgcggtttta 20151297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 14347423 - 14347384
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  14347423 ctttttactacttcaatagaaccgtacacttgcggtttta 14347384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 22039573 - 22039620
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatcac 71  Q
    ||||||||| ||||| |||||| || ||||||||||||||||||||||    
T  22039573 ctttttacttcttcggtagaaccgtgcacttgcggttttactcatcac 22039620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 27407959 - 27408006
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatcac 71  Q
    ||||||||||||| |||||||| || |||||||| |||||||||||||    
T  27407959 ctttttactacttagatagaaccgtgcacttgcgattttactcatcac 27408006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 2782014 - 2782052
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  2782014 tttttactacttcgatagaaccgtgcacttgcggtttta 2782052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 5225807 - 5225769
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  5225807 tttttactacttcgatagaaccgtgcacttgcggtttta 5225769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 11823794 - 11823756
Alignment:
Q  32 tacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  11823794 tacttcggtagaactgtgcacttgcggttttactcatca 11823756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 13419135 - 13419181
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||  |||||| || |||||||||||||||||||||    
T  13419135 ctttttactacttcagtagaaccgtgcacttgcggttttactcatca 13419181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 14494136 - 14494098
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  14494136 tttttactacttcgatagaaccgtgcacttgcggtttta 14494098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 19655424 - 19655386
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  19655424 tttttactacttcgatagaaccgtgcacttgcggtttta 19655386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 20155708 - 20155745
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  20155708 ttttactacttcgatagaaccgtgcacttgcggtttta 20155745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 43496967 - 43497004
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  43496967 ttttactacttcgatagaaccgtgcacttgcggtttta 43497004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 53354125 - 53354088
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  53354125 ttttactacttcgatagaaccgtgcacttgcggtttta 53354088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 18884719 - 18884682
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18884719 ttttactacttcgatagaactgtacacttgcggtttta 18884682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 41462494 - 41462533
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  41462494 ctttttactacttcgatagaaccgtacacttgcggtttta 41462533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 39285945 - 39285907
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  39285945 tttttactacttcgatagaaccgtacacttgcggtttta 39285907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 16364677 - 16364640
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  16364677 ttttactacttcgatagaaccgtacacttgcggtttta 16364640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 1593926 - 1593964
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  1593926 tttttactacttcggtagaaccgtacacttgcggtttta 1593964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 16069182 - 16069224
Alignment:
Q  28 ttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||| |||||| || |||||||||||||||||||||    
T  16069182 ttactacttcggtagaaccgtgcacttgcggttttactcatca 16069224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 19787605 - 19787567
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  19787605 tttttactacttcgatagaaccgtgcacttgcggtttta 19787567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 20413004 - 20413050
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||| || ||| || |||||||||||||||||||||    
T  20413004 ctttttactacttcggtaaaaccgtgcacttgcggttttactcatca 20413050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 22635050 - 22635012
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  22635050 tttttactacttcgatagaaccgtgcacttgcggtttta 22635012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 25727704 - 25727742
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  25727704 tttttactacttcgatagaaccgtgcacttgcggtttta 25727742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 25736112 - 25736150
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  25736112 tttttactacttcgatagaaccgtgcacttgcggtttta 25736150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 4029066 - 4029103
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  4029066 ttttaatacttcgatagaaccgtacacttgcggtttta 4029103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 8654523 - 8654560
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  8654523 ttttactacttcgatagaaccgtacacttgtggtttta 8654560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 8952815 - 8952778
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  8952815 ttttactactttgatagaaccgtacacttgcggtttta 8952778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 46090917 - 46090954
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  46090917 ttttactacttcgatagaaccgtacacttgcgatttta 46090954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 1148 - 1100
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta-ctcatcac 71  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  1148 ctttttactacttcgatagaaccgtacacttgcggttttatctcatcac 1100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 9258007 - 9257955
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta-ctcatcacttcc 75  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  9258007 ctttttactacttcgatagaaccgtacacttgcggttttatcccatcacttcc 9257955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 9312246 - 9312298
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta-ctcatcacttcc 75  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  9312246 ctttttactacttcgatagaaccgtacacttgcggttttatcccatcacttcc 9312298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 5398489 - 5398527
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  5398489 tttttactacttcgatagaaccgtacacttgcggtttta 5398527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 13457449 - 13457487
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  13457449 tttttactacttcgatagaactgtgcacttgcggtttta 13457487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 14941068 - 14941031
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  14941068 ttttactacttcgatagaaccgtacacttgcggtttta 14941031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 15368661 - 15368624
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  15368661 ttttactacttcgatagaaccgtacacttgcggtttta 15368624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 20114486 - 20114523
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  20114486 ttttactacttcgatagaaccgtacacttgcggtttta 20114523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 21507749 - 21507786
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  21507749 ttttactacttcgatagaaccgtacacttgcggtttta 21507786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 46274845 - 46274889
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||| |||||| || |||||||||||||||||||||    
T  46274845 ttttactacttcggtagaaccgtgcacttgcggttttactcatca 46274889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 9010369 - 9010416
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta-ctcatcac 71  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||    
T  9010369 tttttactacttcgatagaaccgtgcacttgcggttttatctcatcac 9010416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 8786620 - 8786574
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||| |||||| || |||||| ||||||||||||||    
T  8786620 ctttttactacttcggtagaaccgtgcacttgtggttttactcatca 8786574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 9193279 - 9193317
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  9193279 tttttactacttcgatagaaccgtgcacttgcggtttta 9193317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 9562599 - 9562645
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||| ||||||  | |||||||||||||||||||||    
T  9562599 ctttttactacttcggtagaaccttgcacttgcggttttactcatca 9562645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 12797883 - 12797921
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  12797883 tttttactacttcgatagaaccgtgcacttgcggtttta 12797921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 16076138 - 16076100
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  16076138 tttttactacttcgatagaaccgtgcacttgcggtttta 16076100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 33611586 - 33611548
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  33611586 tttttactacttcgatagaaccgtgcacttgcggtttta 33611548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 5841437 - 5841474
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  5841437 ttttactacttcgatagaaccgtgcacttgcggtttta 5841474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 12547632 - 12547595
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  12547632 ttttactacttcgatagaaccgtgcacttgcggtttta 12547595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 38387484 - 38387447
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  38387484 ttttactacttcgatagaaccgtacacttgtggtttta 38387447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 48781198 - 48781161
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  48781198 ttttactacttcgatagaaccgtgcacttgcggtttta 48781161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 6039 - 5992
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatcac 71  Q
    ||||||| |||||||||||||| || ||||||||||||||||||||||    
T  6039 ctttttattacttcgatagaaccgtgcacttgcggttttactcatcac 5992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 110881 - 110834
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatcac 71  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||    
T  110881 ctttttactacttcggtagaaccgtgcacttgcggttttactcatcac 110834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 43835617 - 43835578
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  43835617 ctttttactacttcgatagaaccgtacacttgcggtttta 43835578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 37818502 - 37818540
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  37818502 tttttactacttcgatagaactgtgcacttgcggtttta 37818540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 14350967 - 14350930
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  14350967 ttttactacttcgatagaaccgtacacttgcggtttta 14350930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 18229965 - 18229928
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  18229965 ttttactacttcgatagaaccgtacacttgcggtttta 18229928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 21328084 - 21328047
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  21328084 ttttactacttcgatagaactgtgcacttgcggtttta 21328047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 22831913 - 22831950
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  22831913 ttttactacttcgatagaaccgtacacttgcggtttta 22831950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 18400043 - 18400079
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttt 62  Q
    |||||||||||||||||||| ||||||||||||||||    
T  18400043 ttttactacttcgatagaaccgtacacttgcggtttt 18400079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 39730036 - 39729988
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta-ctcatcactt 73  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||||    
T  39730036 ttttactacttcgatagaaccgttcacttgcggttttatctcatcactt 39729988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 21950877 - 21950916
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  21950877 ctttttactacttcgatagaaccgtgcacttgcggtttta 21950916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 21956679 - 21956718
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  21956679 ctttttactacttcgatagaaccgtgcacttgcggtttta 21956718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 22285741 - 22285780
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  22285741 ctttttactacttcgataaaactgtgcacttgcggtttta 22285780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 22371323 - 22371362
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  22371323 ctttttactacttcgatagaaccgtgcacttgcggtttta 22371362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 26013680 - 26013719
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  26013680 ctttttacaacttcgatagaaccgtacacttgcggtttta 26013719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 1989822 - 1989780
Alignment:
Q  28 ttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||| |||||| || |||||||||||||||||||||    
T  1989822 ttactacttcggtagaaccgtgcacttgcggttttactcatca 1989780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 17515198 - 17515160
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  17515198 tttttactacttcgatagaagcgtacacttgcggtttta 17515160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 20037805 - 20037767
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  20037805 tttttactacttcgatagaaccgtgcacttgcggtttta 20037767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 21842347 - 21842309
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  21842347 tttttactacttcgatagaaccgtgcacttgcggtttta 21842309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 21858159 - 21858121
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  21858159 tttttactacttcgatagaaccgtgcacttgcggtttta 21858121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 22725161 - 22725117
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcat 68  Q
    ||||||||||||||| |||||| ||  ||||||||||||||||||    
T  22725161 ctttttactacttcggtagaaccgtttacttgcggttttactcat 22725117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 16298 - 16260
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  16298 tttttactacttcgatagaaccgtacacttgcggtttta 16260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 17037 - 17075
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  17037 tttttactacttcgatagaactgtgcacttgcggtttta 17075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 8165 - 8127
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  8165 tttttactacttcgatagaaccgtacacttgcggtttta 8127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000008; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 2952974 - 2952928
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  2952974 ctttttactacttcggtagaaccgtacacttgcagttttactcatca 2952928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 20739086 - 20739132
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||    
T  20739086 ctttttactacttcggtagaaccgtgcacttgcggttttactcatca 20739132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 31757479 - 31757433
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||| |||||| |||||||||| |||||||||||||    
T  31757479 ctttttactacttcggtagaaccgtacacttgcagttttactcatca 31757433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 20246327 - 20246364
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  20246327 ttttactacttcgatagaaccgtacacttgcggtttta 20246364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 12323025 - 12323063
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  12323025 tttttactacttcgatagaaccgtgcacttgcggtttta 12323063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 20167521 - 20167479
Alignment:
Q  28 ttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||| |||||| || |||||||||||||||||||||    
T  20167521 ttactacttcggtagaaccgtgcacttgcggttttactcatca 20167479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 20449157 - 20449119
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  20449157 tttttactacttcgatagaaccgtgcacttgcggtttta 20449119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 21999849 - 21999811
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  21999849 tttttactacttcgatagaaccgtgcacttgcggtttta 21999811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 42789155 - 42789109
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta-ctcatcac 71  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  42789155 ttttactacttcgatagaaccgtgcacttgcggttttatctcatcac 42789109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 14483159 - 14483196
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  14483159 ttttactacttcgatagaaccgtgcacttgcggtttta 14483196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000008; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 23698156 - 23698110
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggttttactcatcac 71  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||||    
T  23698156 tttttactacttcggtagaaccatacacttgcggttttactcatcac 23698110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 41652958 - 41652912
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||||||| || || |||||||||||||||||||||    
T  41652958 ctttttactacttcgataggaccgtgcacttgcggttttactcatca 41652912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 22438066 - 22438111
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    |||||||||||||| |||||| || |||||||||||||||||||||    
T  22438066 tttttactacttcggtagaaccgtgcacttgcggttttactcatca 22438111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 25038256 - 25038219
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  25038256 ttttactacttcgatagaaccgtacacttgcggtttta 25038219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 20692 - 20652
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttac 64  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  20692 ctttttactacttcggtagaactgtgcacttgcggttttac 20652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 22329211 - 22329258
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatcac 71  Q
    ||||||||||||||| |||||| || ||||| ||||||||||||||||    
T  22329211 ctttttactacttcggtagaaccgtgcacttacggttttactcatcac 22329258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 23341317 - 23341356
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  23341317 ctttttactacttcgatagaaccgtgcacttgcggtttta 23341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 25369652 - 25369617
Alignment:
Q  28 ttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| ||||||||||||||    
T  25369652 ttactacttcgatagaactgtgcacttgcggtttta 25369617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 25482135 - 25482182
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta-ctcatcac 71  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||    
T  25482135 tttttactacttcgatagaaccgtgcacttgcggttttatctcatcac 25482182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 25489741 - 25489788
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta-ctcatcac 71  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||    
T  25489741 tttttactacttcgatagaaccgtgcacttgcggttttatctcatcac 25489788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 20244846 - 20244808
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  20244846 tttttactacttcggtagaaccgtacacttgcggtttta 20244808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 23800223 - 23800185
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  23800223 tttttactacttcgatagaaccgtgcacttgcggtttta 23800185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 25857923 - 25857877
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggttttactcatca 70  Q
    ||||||||||||||| |||||| ||  ||||||||||||||||||||    
T  25857923 ctttttactacttcggtagaaccgtgaacttgcggttttactcatca 25857877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 40916131 - 40916093
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  40916131 tttttactatttcgatagaaccgtacacttgcggtttta 40916093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 23634692 - 23634729
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  23634692 ttttactacttcgatagaaccttacacttgcggtttta 23634729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 23649518 - 23649555
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||| | |||||||||||||||||    
T  23649518 ttttactacttcgatagatccgtacacttgcggtttta 23649555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 30313508 - 30313460
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta-ctcatcact 72  Q
    ||||||||||||||||| ||| || |||||||||||||| |||||||||    
T  30313508 tttttactacttcgatataaccgtgcacttgcggttttatctcatcact 30313460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 2537 - 2500
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  2537 ttttactacttcgatagaactgtgcacttgcggtttta 2500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 2165 - 2128
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  2165 ttttactacttcgatagaaccgtacacttgcggtttta 2128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 2571 - 2608
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttt 62  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  2571 tttttactacttcgatagaaccgtacacttgcggtttt 2608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 6499 - 6536
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  6499 ttttactacttcgatagaaccgtacacttgcggtttta 6536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 135110 - 135159
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta-ctcatcactt 73  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||||    
T  135110 tttttactacttcgatagaaccgtgcacttgcggttttatctcatcactt 135159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 163251 - 163288
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||||||||    
T  163251 ttttactacttcgatagaaccgtacacttgcggtttta 163288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 198 - 246
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta-ctcatcac 71  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  198 ctttttactacttcggtagaactatacacttgcggttttatctcatcac 246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 11884 - 11845
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  11884 ctttttacaacttcgatagaactgtgcacttgcggtttta 11845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 69999 - 69960
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  69999 ctttttactacttcgatagaaccgtacacttgcgatttta 69960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 149870 - 149835
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggttt 61  Q
    |||||||||||||||||||| |||||||||||||||    
T  149870 ttttactacttcgatagaaccgtacacttgcggttt 149835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 245236 - 245202
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtt 60  Q
    |||||||||||||||||||| ||||||||||||||    
T  245236 ttttactacttcgatagaaccgtacacttgcggtt 245202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 182017 - 181978
Alignment:
Q  24 ctttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  182017 ctttttactacttcgatagaaccgtgcacttgcggtttta 181978  T

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Target: scaffold1403 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 1692 - 1654
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  1692 tttttactacttcgatagaaccgtgcacttgcggtttta 1654  T

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Target: scaffold0509 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 435 - 473
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  435 tttttactacttcgatagaaccgtgcacttgcggtttta 473  T

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Target: scaffold0471 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 9151 - 9113
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  9151 tttttactacttcgatagaaccgtgcacttgcggtttta 9113  T

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Target: scaffold0360 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 5446 - 5408
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  5446 tttttactacttcgatagaaccgtgcacttgcggtttta 5408  T

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Target: scaffold0218 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 16941 - 16903
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  16941 tttttactacttcgatagaaccgtgcacttgcggtttta 16903  T

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Target: scaffold0096 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 37351 - 37313
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  37351 tttttactacttcgatagaaccgtgcacttgcggtttta 37313  T

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Target: scaffold0084 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 44627 - 44665
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  44627 tttttactacttcgatagaaccgtgcacttgcggtttta 44665  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 17322 - 17360
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  17322 tttttactacttcgatagaaccgtgcacttgcggtttta 17360  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 79191 - 79229
Alignment:
Q  25 tttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  79191 tttttactacttcgatagaaccgtgcacttgcggtttta 79229  T

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Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 111325 - 111362
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  111325 ttttactacttcgatagaaccgtgcacttgcggtttta 111362  T

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Target: scaffold1496 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 1679 - 1642
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  1679 ttttactacttcgatagaaccgtgcacttgcggtttta 1642  T

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Target: scaffold0532 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 4440 - 4403
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  4440 ttttactacttcgatagaaccgtgcacttgcggtttta 4403  T

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Target: scaffold0317 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 13561 - 13524
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  13561 ttttactacttcgatataaccgtacacttgcggtttta 13524  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 803 - 840
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  803 ttttactacttcgatagaaccgtgcacttgcggtttta 840  T

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Target: scaffold0113; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 42824 - 42787
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  42824 ttttactacttcgataggactgtgcacttgcggtttta 42787  T

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Target: scaffold0042 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 55992 - 55955
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  55992 ttttactacttcgataaaaccgtacacttgcggtttta 55955  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 34747 - 34784
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  34747 ttttactacttcgatagaaccgtacacttgcggattta 34784  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 216617 - 216580
Alignment:
Q  26 ttttactacttcgatagaactgtacacttgcggtttta 63  Q
    |||||||||||||||||||| || ||||||||||||||    
T  216617 ttttactacttcgatagaaccgtgcacttgcggtttta 216580  T

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